TCONS_00001059 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001059
Unique NameTCONS_00001059
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3708

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001059 ID=TCONS_00001059|Name=TCONS_00001059|organism=Clytia hemisphaerica|type=transcript|length=3708bp
ttttaggcaaaataaaaatttgaacaatGAAATGAATATATCAAATACTT
GCTTTCAAGGGCACAGAAATTGTGTCCTTATTTCTGATCACTTAGATTTC
ATTTCTATCAATACTGTATCTGATTGGAGAAGAATTTTATTATATCTTGG
CATTGAACAAAATATAATCAACAGAGTCGAAGAAGATGGTAATTTGCGGA
ATTATGACTCGCGTGAAGTGGCTTATCAAGGAtatttgaaatggaaaaac
atcgATCCCTACAAAGCATGCTTCTGTATTATTCAACAAGCTTTATCCAG
AGCACAAAGAAATGATGTCACAAAATCactgaaagaaaaatacaaCTTTC
ATGCGAGAAGAAGCATTCGCCACAATAGCTTCACATTTCCTATCGAAAAT
TTTGTTGGTAGAGAGAAGGAGGTGGAGCAGATTATGCGATTTATTGATGA
TTCCAATGCCAAAAAGAAATTAATGGTTTTGTGTGGTATGCCATGTGTTG
GAAAGTCTGCCTTGGTCCACCATGCAGTAAATAAGCTAGTCCAAAATCAA
CCTGATGTTGATGTCATTCGTCCTCTTTTTATTTCTAAGAAAGGGGAAAC
AAGTTGGGGTCTTGAAGATATTGCAGTCAATATATTGGAGGAGATACATC
CTGATCAAGAGTACATCAGTTACAGAGTAGCTGCTTTGCATAAAATATTG
ATAAGCTTGGAGAAACCAATGCTTTTGGTTCTTGAGCTGTGCGGTGTGGA
GATCAAGAAGAACACAGTGACAGGATTCTCATTATTTTTATCCAGCTTAT
TGCATGCCTCTAACcaacatttgaaaatcattCTGACAGCTTACAAGGCA
GCAGATATTTTGAATCCACGACATGAGATATCATATGAAGAAATGCAACT
CCAGGGTCTTTCACAACCAGAAGCTTTAAAAGTCCTACGTGCTATAAATC
CTCGAATGACTAACATGAATTGCAAACGGCTCTATGATAAATGTGGAGGT
CATCcatatattttgagaaaaattggtGCTCATGTCAAGAATTTCCATTC
CAATGAAAAAGAATTGGAATCTTTTCTCAAAGAGCTGGGTAGCCCAAAAC
ATCTTGATGTCTTGCACCCTATGATCGCACCACCAACAATCAAACACGAT
ATGAAACTTGTATTTGATGAATTGGAAGATgtggaaaagaaaacattggt
GCAGCTGTGCGGCTTTCCTGAAATCATCCCTGTCGATGCACTTGAACACA
TTTTTACATCTTCTGTCTATCATACATGCAACCACTTATGCATTAATCAT
TGCATTATTGAAAAGTCTAGCTCCGGAACATACTTCAAAATGAATCTTTT
AACAAGATCATGTATCAAAGACTTCGCACAATCTGATCCAGCCTTAAATC
AAGTCCTCACAGAAGCCAAAATAGAGATTaacaaatactatttgaatCTC
ATCAAATCCTTGGATGAGATTTTCATATTTCCCTGTAAACTCGAAAAGAA
AAGCAATTGTTTTAATTTGGTCTCTGATTATCAAGAAAAATGCACATTCT
GCCCTGAGGACTGCTCCTGTCCGACAATCAAAATTGTAAAGTATCTTTTT
CGTATCAGAAAAACTCTGATCATGCGAGCCATTCAACAAGGCTTATCTAG
TGACATTCAATTCCATGAAACAGTGGAAATTGCATTGAAAGTCGTACACT
TTTTACGATTTGTAATGAGTAAAGGAGATTTGCTGGAAATgtatgatgaa
attttcaatatttgtaaaaaaagagGAGAGAAGTTGTTGATGGCAATGGC
TGTTGCGAATCTTGTATTTGTGAAAGCTTATTATCATGTGAGGGAAGGAG
TGGAAGAAAACATCCATTACCTCACCAAAGCCATCAATGTGTTAGATGGT
AGTCAGATGTATTTATATGGTGTTACTTACACCCTTATTTATTGCTACAT
GAAACGTGGTCACTTATATACATTTACTTCTTGTAACCAAAAAGAGTGTC
TGACAGACTTCAATCGAGCTGAGATGTTGATCAATAAgtttttatcagaa
aaagaaCGACAACTCTTTCTCATGGTTTTGAGCGGTTACTGTTCAGCGTT
TCATTACAGTACGAAAGATTTCCATAAAAGCATCGAAGTGCGGAAAACTC
AATTGATTGGCTATCAAAAGCATTTTGGTGTCCACACACATTGTGCAAGA
GCTCTACACTACCAAAGTCATGCTTGCGGTAAGGTGGCTGATTATGGGAG
CGCTATCAAGTGTGCACGAGTGGCTTATGGTATTTACCACAAACTGTATG
GAGATGGAGTTGAAACTATGAAGGTGCTGTCAACCCTTGGGAAAATGTAC
AtcaaaaatggccaaatcgagaaaggttttcaaaagttagacCATGCTAA
AAATGTTGCTGAAAATGCACTTGGGGAGCATGAAAAGGTTGCACGATGTT
ATGAACAGCTTGCTGTCGTCAAGAAAAGTCATGGCTTCTCCCTAGAAGCT
GACGAATTAGAGCTCAGAGCAAAAGCCATCCGTACAAACTTTGAAAGAAA
ATCAAGCATTAACATGAAGAAATATAGTTTGCAGTTGTCAAAGGATCATT
TGGGTCATGACATTTATGCACTGAGCTCAGATGAAGTGCCAAAGAAGGAT
CATTATACACAGGTGGTGTTTTTGACCATGTTTATTGCCATCATATGGCG
TTGCTTTGAAATTTATTACACCTGTAATTGTGATCGGTTTTCATTTTAAT
GTCTTTTTATTGAACTTTATGTACGTGTACTTGCATACCCGGGGATGGGG
CACTTAGGCAAAATTGGGTACGGGACGTGTcgctggtcagggtccctttt
ttaggctctgaagatatctgacagggtcccaaatctACTAAATTTCAATA
TGTGTATctgaaattttacaatttttcgtctacttttctACGTCTacgtc
atttttgccacttgttAGGGTGGAGATtggaaaaactttcaatttttcgt
tctgacaaggtcaccattttaccaaaaattcataCCTGACAGGGTCAACT
TTTTAAACTcaagcggcacgtccccgtcggccgtcaaggccAGTGCCCTC
CCCGGGCTCGCATAAGACATCTCAATGTCAAAAATGACCATGTAGGATAA
AACAACATTTTCTTCCAACATTGAGAGATGGAGTCCAGGGTCAGTAAGTT
AACATTTAAAAAAGAGATGCTACGGTCTAGATTGTATTTATGATTGTCTA
CTACATCTAGCTTTTAAACATTCCGATAGCCTTTACTTTTAAAGTATTTC
AAGTTTACCATGATTGACAATTAATGCTCAATTTcagtatttaatttttt
gtttcgattATTTGTGTAGTTTGAATTTATTGCAATTAGATTTTATATAC
CAGTacataaattataaaattaattattttggaCATTTTAGGTTTACAAT
CATAatgatttttatataaaattcaaatattttgatatatttttatagAT
TCTTGTACTTGTTGTAAAttagattttgataattttctacGTTTGGGTTG
AGGAGTTAACTCAAGCGGGATGCTgctttattttatttgttaatCACGCA
CGCCTATGTTTATTTCAACTTGTAACTATTTTATAAGCTCTTTAGGCTAA
AGACATTCATTGACACTTTTCTTCCATTCTCTTTCGGTTCAATCGTGATC
AAAATGAA
Run BLAST on NCBI

protein sequence of TCONS_00001059-protein

>TCONS_00001059-protein ID=TCONS_00001059-protein|Name=TCONS_00001059-protein|organism=Clytia hemisphaerica|type=polypeptide|length=915bp
FRQNKNLNNEMNISNTCFQGHRNCVLISDHLDFISINTVSDWRRILLYLG
IEQNIINRVEEDGNLRNYDSREVAYQGYLKWKNIDPYKACFCIIQQALSR
AQRNDVTKSLKEKYNFHARRSIRHNSFTFPIENFVGREKEVEQIMRFIDD
SNAKKKLMVLCGMPCVGKSALVHHAVNKLVQNQPDVDVIRPLFISKKGET
SWGLEDIAVNILEEIHPDQEYISYRVAALHKILISLEKPMLLVLELCGVE
IKKNTVTGFSLFLSSLLHASNQHLKIILTAYKAADILNPRHEISYEEMQL
QGLSQPEALKVLRAINPRMTNMNCKRLYDKCGGHPYILRKIGAHVKNFHS
NEKELESFLKELGSPKHLDVLHPMIAPPTIKHDMKLVFDELEDVEKKTLV
QLCGFPEIIPVDALEHIFTSSVYHTCNHLCINHCIIEKSSSGTYFKMNLL
TRSCIKDFAQSDPALNQVLTEAKIEINKYYLNLIKSLDEIFIFPCKLEKK
SNCFNLVSDYQEKCTFCPEDCSCPTIKIVKYLFRIRKTLIMRAIQQGLSS
DIQFHETVEIALKVVHFLRFVMSKGDLLEMYDEIFNICKKRGEKLLMAMA
VANLVFVKAYYHVREGVEENIHYLTKAINVLDGSQMYLYGVTYTLIYCYM
KRGHLYTFTSCNQKECLTDFNRAEMLINKFLSEKERQLFLMVLSGYCSAF
HYSTKDFHKSIEVRKTQLIGYQKHFGVHTHCARALHYQSHACGKVADYGS
AIKCARVAYGIYHKLYGDGVETMKVLSTLGKMYIKNGQIEKGFQKLDHAK
NVAENALGEHEKVARCYEQLAVVKKSHGFSLEADELELRAKAIRTNFERK
SSINMKKYSLQLSKDHLGHDIYALSSDEVPKKDHYTQVVFLTMFIAIIWR
CFEIYYTCNCDRFSF
Run BLAST on NCBI

transcript from alignment at sc0000007:1161088..1166368+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001059 ID=TCONS_00001059|Name=TCONS_00001059|organism=Clytia hemisphaerica|type=transcript|length=5281bp|location=Sequence derived from alignment at sc0000007:1161088..1166368+ (Clytia hemisphaerica)
ttttaggcaaaataaaaatttgaacaatGAAATGAATATATCAAATACTT
GCTTTCAAGGGCACAGAAATTGTGTCCTTATTTCTGATCACTTAGATTTC
ATTTCTATCAATACTGTATCTGATTGGAGAAGAATTTTATTATATCTTGG
CATTGAACAAAATATAATCAACAGAGTCGAAGAAGATGGTAATTTGCGGA
ATTATGACTCGCGTGAAGTGGCTTATCAAGGAtatttgaaatggaaaaac
atcgATCCCTACAAAGCATGCTTCTGTATTATTCAACAAGCTTTATCCAG
AGCACAAAGAAATGATGTCACAAAATCactgaaagaaaaatacaaCTTTC
ATGGTAAGAATATAGCAAGGCTTTTTGGTCAGTATTTATTTTGTTCAGTT
ACATTACTGTGTTTATGATTAGAGAATCAAATAATCGAAAGGTTCTCAAT
AGCACTCCGTACCTGAAATGTATACCTTTTATTTAACAACACCTTTAACC
TTTAACAAATTTGATGCCAATATTGTGGTGTTTCTAATCAGATTCTTTTA
TTTGTTCCAacaagaattttcttttttctttaaagttacctaaaattgaa
aaaattatttaaccCTTTGTGTATAGTGCTTTTTGCCCTCCCCCCTCCCA
AAAAAAAATACAGATTTTGataacatttgaaatatttatctaATTGACTT
AAGAAATTTGAATTGGCACTTGGGTGAAAATTTTGGCATCATTGATGACA
TGTATTTTTTGGGCATAGGATCAATTTTTGCCACCGGTTGCTATCGTGTA
TTTTTTAGACCAGCCATAATTGCCCTTTTTTGCCTAAATCAACCCTATGA
TACTGTATCTAGTGATTggaaaatgctattgacttgGAATTTCGACAAGT
GTGGGTATTGATAAAGCTTGCAACCAAAACTTCAGCAAAATGGGACAAGC
AGTTATACTGAATGTGAGCTTTCTGTATAAAATACAGGCCAGTCTGTTAA
ATACCAGCCGGTCAAGTGAAGAAACTGCAATTTTGCACACTGTCTTCGAT
GAATAATAAATATCACTGGTGAAAATATCATAAGTCAAAAGCTCCAATAG
TTCCTAATCTCTGACAGTTGGTTAACATGCATTTTACACACCAGTctgca
aagtaccaaatactcaagggaaaaaattcttttctgttACTAatctttta
tttgacaaatcagcCCTCAGGAACAAATTGCAGTCAAATCGAGCGAGTGA
ATTAGTCAATCATGATTTGATtaagtttgatcaattttgtaaatcatTTC
CAGTTATTCATATCTACCTTACACTTGTTGATCTTGAGATTATAAGGAGT
GCCTCCGGcaccctccccccccccaagaTCCCCTAgtaaaaaaaaggaag
atgCTCAAAAGTTTAAAAGCAAAATATCNAAGGATCTTGAGATTATAAGG
AGTGCCTTCGGCACCTTCCCCCCCCCCAAGATCCCCTAgtaaaaaaaagg
aagatgCTCAAAAGTTTAAAAGCAAAATATCTTTATTGACTTGGGAATAT
TAAGGCAAGCAGGGTTTTACCAGGTTTCTTTGCAATTAAGCTTTCTTAGT
TTTTTTGCTTCTAAGACCCTACATTTGTCTACATTTTGtgctgatttttt
tcttctatttagCGAGAAGAAGCATTCGCCACAATAGCTTCACATTTCCT
ATCGAAAATTTTGTTGGTAGAGAGAAGGAGGTGGAGCAGATTATGCGATT
TATTGATGATTCCAATGCCAAAAAGAAATTAATGGTTTTGTGTGGTATGC
CATGTGTTGGAAAGTCTGCCTTGGTCCACCATGCAGTAAATAAGCTAGTC
CAAAATCAACCTGATGTTGATGTCATTCGTCCTCTTTTTATTTCTAAGAA
AGGGGAAACAAGTTGGGGTCTTGAAGATATTGCAGTCAATATATTGGAGG
AGATACATCCTGATCAAGAGTACATCAGTTACAGAGTAGCTGCTTTGCAT
AAAATATTGATAAGCTTGGAGAAACCAATGCTTTTGGTTCTTGAGCTGTG
CGGTGTGGAGATCAAGAAGAACACAGTGACAGGATTCTCATTATTTTTAT
CCAGCTTATTGCATGCCTCTAACcaacatttgaaaatcattCTGACAGCT
TACAAGGCAGCAGATATTTTGAATCCACGACATGAGATATCATATGAAGA
AATGCAACTCCAGGGTCTTTCACAACCAGAAGCTTTAAAAGTCCTACGTG
CTATAAATCCTCGAATGACTAACATGAATTGCAAACGGCTCTATGATAAA
TGTGGAGGTCATCcatatattttgagaaaaattggtGCTCATGTCAAGAA
TTTCCATTCCAATGAAAAAGAATTGGAATCTTTTCTCAAAGAGCTGGGTA
GCCCAAAACATCTTGATGTCTTGCACCCTATGATCGCACCACCAACAATC
AAACACGATATGAAACTTGTATTTGATGAATTGGAAGATgtggaaaagaa
aacattggtGCAGCTGTGCGGCTTTCCTGAAATCATCCCTGTCGATGCAC
TTGAACACATTTTTACATCTTCTGTCTATCATACATGCAACCACTTATGC
ATTAATCATTGCATTATTGAAAAGTCTAGCTCCGGAACATACTTCAAAAT
GAATCTTTTAACAAGATCATGTATCAAAGACTTCGCACAATCTGATCCAG
CCTTAAATCAAGTCCTCACAGAAGCCAAAATAGAGATTaacaaatactat
ttgaatCTCATCAAATCCTTGGATGAGATTTTCATATTTCCCTGTAAACT
CGAAAAGAAAAGCAATTGTTTTAATTTGGTCTCTGATTATCAAGAAAAAT
GCACATTCTGCCCTGAGGACTGCTCCTGTCCGACAATCAAAATTGTAAAG
TATCTTTTTCGTATCAGAAAAACTCTGATCATGCGAGCCATTCAACAAGG
CTTATCTAGTGACATTCAATTCCATGAAACAGTGGAAATTGCATTGAAAG
TCGTACACTTTTTACGATTTGTAATGAGTAAAGGAGATTTGCTGGAAATg
tatgatgaaattttcaatatttgtaaaaaaagagGAGAGAAGTTGTTGAT
GGCAATGGCTGTTGCGAATCTTGTATTTGTGAAAGCTTATTATCATGTGA
GGGAAGGAGTGGAAGAAAACATCCATTACCTCACCAAAGCCATCAATGTG
TTAGATGGTAGTCAGATGTATTTATATGGTGTTACTTACACCCTTATTTA
TTGCTACATGAAACGTGGTCACTTATATACATTTACTTCTTGTAACCAAA
AAGAGTGTCTGACAGACTTCAATCGAGCTGAGATGTTGATCAATAAgttt
ttatcagaaaaagaaCGACAACTCTTTCTCATGGTTTTGAGCGGTTACTG
TTCAGGTAAGAAAACTGCCGTGAACTTTCTTTATCTCGTTGTTTTAATTC
ATTTCTCACAGTGCGTTAGTTACAGGGGGTAGGCTTTTACCCCAACGACT
TTTAGAGGTGGTTTTTTTCCTAGAGATAAAAATTCAGCTTTCAAAGATCC
TAATTCAAATAATTTTAGTCTTTGAGTCCCTTGAGCTCTAAAACCTCTCA
CGAGCCCTCGTGACTTGTGTGCTTCTAGCTTCCTGATGTTTTTAGGCTCT
TCTGCTTTTTTCTTTCTAGCGTTTCATTACAGTACGAAAGATTTCCATAA
AAGCATCGAAGTGCGGAAAACTCAATTGATTGGCTATCAAAAGCATTTTG
GTGTCCACACACATTGTGCAAGAGCTCTACACTACCAAAGTCATGCTTGC
GGTAAGGTGGCTGATTATGGGAGCGCTATCAAGTGTGCACGAGTGGCTTA
TGGTATTTACCACAAACTGTATGGAGATGGAGTTGAAACTATGAAGGTGC
TGTCAACCCTTGGGAAAATGTACAtcaaaaatggccaaatcgagaaaggt
tttcaaaagttagacCATGCTAAAAATGTTGCTGAAAATGCACTTGGGGA
GCATGAAAAGGTTGCACGATGTTATGAACAGCTTGCTGTCGTCAAGAAAA
GTCATGGCTTCTCCCTAGAAGCTGACGAATTAGAGCTCAGAGCAAAAGCC
ATCCGTACAAACTTTGAAAGAAAATCAAGCATTAACATGAAGAAATATAG
TTTGCAGTTGTCAAAGGATCATTTGGGTCATGACATTTATGCACTGAGCT
CAGATGAAGTGCCAAAGAAGGATCATTATACACAGGTGGTGTTTTTGACC
ATGTTTATTGCCATCATATGGCGTTGCTTTGAAATTTATTACACCTGTAA
TTGTGATCGGTTTTCATTTTAATGTCTTTTTATTGAACTTTATGTACGTG
TACTTGCATACCCGGGGATGGGGCACTTAGGCAAAATTGGGTACGGGACG
TGTcgctggtcagggtcccttttttaggctctgaagatatctgacagggt
cccaaatctACTAAATTTCAATATGTGTATctgaaattttacaatttttc
gtctacttttctACGTCTacgtcatttttgccacttgttAGGGTGGAGAT
tggaaaaactttcaatttttcgttctgacaaggtcaccattttaccaaaa
attcataCCTGACAGGGTCAACTTTTTAAACTcaagcggcacgtccccgt
cggccgtcaaggccAGTGCCCTCCCCGGGCTCGCATAAGACATCTCAATG
TCAAAAATGACCATGTAGGATAAAACAACATTTTCTTCCAACATTGAGAG
ATGGAGTCCAGGGTCAGTAAGTTAACATTTAAAAAAGAGATGCTACGGTC
TAGATTGTATTTATGATTGTCTACTACATCTAGCTTTTAAACATTCCGAT
AGCCTTTACTTTTAAAGTATTTCAAGTTTACCATGATTGACAATTAATGC
TCAATTTcagtatttaattttttgtttcgattATTTGTGTAGTTTGAATT
TATTGCAATTAGATTTTATATACCAGTacataaattataaaattaattat
tttggaCATTTTAGGTTTACAATCATAatgatttttatataaaattcaaa
tattttgatatatttttatagATTCTTGTACTTGTTGTAAAttagatttt
gataattttctacGTTTGGGTTGAGGAGTTAACTCAAGCGGGATGCTgct
ttattttatttgttaatCACGCACGCCTATGTTTATTTCAACTTGTAACT
ATTTTATAAGCTCTTTAGGCTAAAGACATTCATTGACACTTTTCTTCCAT
TCTCTTTCGGTTCAATCGTGATCAAAATGAA

Coding sequence (CDS) from alignment at sc0000007:1161088..1166368+

>TCONS_00001059 ID=TCONS_00001059|Name=TCONS_00001059|organism=Clytia hemisphaerica|type=CDS|length=8244bp|location=Sequence derived from alignment at sc0000007:1161088..1166368+ (Clytia hemisphaerica)
tttaggcaaaataaaaatttgaacaatGAAATGAATATATCAAATACTTG
CTTTCAAGGGCACAGAAATTGTGTCCTTATTTCTGATCACTTAGATTTCA
TTTCTATCAATACTGTATCTGATTGGAGAAGAATTTTATTATATCTTGGC
ATTGAACAAAATATAATCAACAGAGTCGAAGAAGATGGTAATTTGCGGAA
TTATGACTCGCGTGAAGTGGCTTATCAAGGAtatttgaaatggaaaaaca
tcgATCCCTACAAAGCATGCTTCTGTATTATTCAACAAGCTTTATCCAGA
GCACAAAGAAATGATGTCACAAAATCactgaaagaaaaatacaaCTTTCA
TGCGAGAAGAAGCATTCGCCACAATAGCTTCACATTTCCTATCGAAAATT
TTGTTGGTAGAGAGAAGGAGGTGGAGCAGATTATGCGATTTATTGATGAT
TCCAATGCCAAAAAGAAATTAATGGTTTTGTGTGGTATGCCATGTGTTGG
AAAGTCTGCCTTGGTCCACCATGCAGTAAATAAGCTAGTCCAAAATCAAC
CTGATGTTGATGTCATTCGTCCTCTTTTTATTTCTAAGAAAGGGGAAACA
AGTTGGGGTCTTGAAGATATTGCAGTCAATATATTGGAGGAGATACATCC
TGATCAAGAGTACATCAGTTACAGAGTAGCTGCTTTGCATAAAATATTGA
TAAGCTTGGAGAAACCAATGCTTTTGGTTCTTGAGCTGTGCGGTGTGGAG
ATCAAGAAGAACACAGTGACAGGATTCTCATTATTTTTATCCAGCTTATT
GCATGCCTCTAACcaacatttgaaaatcattCTGACAGCTTACAAGGCAG
CAGATATTTTGAATCCACGACATGAGATATCATATGAAGAAATGCAACTC
CAGGGTCTTTCACAACCAGAAGCTTTAAAAGTCCTACGTGCTATAAATCC
TCGAATGACTAACATGAATTGCAAACGGCTCTATGATAAATGTGGAGGTC
ATCcatatattttgagaaaaattggtGCTCATGTCAAGAATTTCCATTCC
AATGAAAAAGAATTGGAATCTTTTCTCAAAGAGCTGGGTAGCCCAAAACA
TCTTGATGTCTTGCACCCTATGATCGCACCACCAACAATCAAACACGATA
TGAAACTTGTATTTGATGAATTGGAAGATgtggaaaagaaaacattggtG
CAGCTGTGCGGCTTTCCTGAAATCATCCCTGTCGATGCACTTGAACACAT
TTTTACATCTTCTGTCTATCATACATGCAACCACTTATGCATTAATCATT
GCATTATTGAAAAGTCTAGCTCCGGAACATACTTCAAAATGAATCTTTTA
ACAAGATCATGTATCAAAGACTTCGCACAATCTGATCCAGCCTTAAATCA
AGTCCTCACAGAAGCCAAAATAGAGATTaacaaatactatttgaatCTCA
TCAAATCCTTGGATGAGATTTTCATATTTCCCTGTAAACTCGAAAAGAAA
AGCAATTGTTTTAATTTGGTCTCTGATTATCAAGAAAAATGCACATTCTG
CCCTGAGGACTGCTCCTGTCCGACAATCAAAATTGTAAAGTATCTTTTTC
GTATCAGAAAAACTCTGATCATGCGAGCCATTCAACAAGGCTTATCTAGT
GACATTCAATTCCATGAAACAGTGGAAATTGCATTGAAAGTCGTACACTT
TTTACGATTTGTAATGAGTAAAGGAGATTTGCTGGAAATgtatgatgaaa
ttttcaatatttgtaaaaaaagagGAGAGAAGTTGTTGATGGCAATGGCT
GTTGCGAATCTTGTATTTGTGAAAGCTTATTATCATGTGAGGGAAGGAGT
GGAAGAAAACATCCATTACCTCACCAAAGCCATCAATGTGTTAGATGGTA
GTCAGATGTATTTATATGGTGTTACTTACACCCTTATTTATTGCTACATG
AAACGTGGTCACTTATATACATTTACTTCTTGTAACCAAAAAGAGTGTCT
GACAGACTTCAATCGAGCTGAGATGTTGATCAATAAgtttttatcagaaa
aagaaCGACAACTCTTTCTCATGGTTTTGAGCGGTTACTGTTCAGCGTTT
CATTACAGTACGAAAGATTTCCATAAAAGCATCGAAGTGCGGAAAACTCA
ATTGATTGGCTATCAAAAGCATTTTGGTGTCCACACACATTGTGCAAGAG
CTCTACACTACCAAAGTCATGCTTGCGGTAAGGTGGCTGATTATGGGAGC
GCTATCAAGTGTGCACGAGTGGCTTATGGTATTTACCACAAACTGTATGG
AGATGGAGTTGAAACTATGAAGGTGCTGTCAACCCTTGGGAAAATGTACA
tcaaaaatggccaaatcgagaaaggttttcaaaagttagacCATGCTAAA
AATGTTGCTGAAAATGCACTTGGGGAGCATGAAAAGGTTGCACGATGTTA
TGAACAGCTTGCTGTCGTCAAGAAAAGTCATGGCTTCTCCCTAGAAGCTG
ACGAATTAGAGCTCAGAGCAAAAGCCATCCGTACAAACTTTGAAAGAAAA
TCAAGCATTAACATGAAGAAATATAGTTTGCAGTTGTCAAAGGATCATTT
GGGTCATGACATTTATGCACTGAGCTCAGATGAAGTGCCAAAGAAGGATC
ATTATACACAGGTGGTGTTTTTGACCATGTTTATTGCCATCATATGGCGT
TGCTTTGAAATTTATTACACCTGTAATTGTGATCGGTTTTCATTTTAAtt
taggcaaaataaaaatttgaacaatGAAATGAATATATCAAATACTTGCT
TTCAAGGGCACAGAAATTGTGTCCTTATTTCTGATCACTTAGATTTCATT
TCTATCAATACTGTATCTGATTGGAGAAGAATTTTATTATATCTTGGCAT
TGAACAAAATATAATCAACAGAGTCGAAGAAGATGGTAATTTGCGGAATT
ATGACTCGCGTGAAGTGGCTTATCAAGGAtatttgaaatggaaaaacatc
gATCCCTACAAAGCATGCTTCTGTATTATTCAACAAGCTTTATCCAGAGC
ACAAAGAAATGATGTCACAAAATCactgaaagaaaaatacaaCTTTCATG
CGAGAAGAAGCATTCGCCACAATAGCTTCACATTTCCTATCGAAAATTTT
GTTGGTAGAGAGAAGGAGGTGGAGCAGATTATGCGATTTATTGATGATTC
CAATGCCAAAAAGAAATTAATGGTTTTGTGTGGTATGCCATGTGTTGGAA
AGTCTGCCTTGGTCCACCATGCAGTAAATAAGCTAGTCCAAAATCAACCT
GATGTTGATGTCATTCGTCCTCTTTTTATTTCTAAGAAAGGGGAAACAAG
TTGGGGTCTTGAAGATATTGCAGTCAATATATTGGAGGAGATACATCCTG
ATCAAGAGTACATCAGTTACAGAGTAGCTGCTTTGCATAAAATATTGATA
AGCTTGGAGAAACCAATGCTTTTGGTTCTTGAGCTGTGCGGTGTGGAGAT
CAAGAAGAACACAGTGACAGGATTCTCATTATTTTTATCCAGCTTATTGC
ATGCCTCTAACcaacatttgaaaatcattCTGACAGCTTACAAGGCAGCA
GATATTTTGAATCCACGACATGAGATATCATATGAAGAAATGCAACTCCA
GGGTCTTTCACAACCAGAAGCTTTAAAAGTCCTACGTGCTATAAATCCTC
GAATGACTAACATGAATTGCAAACGGCTCTATGATAAATGTGGAGGTCAT
CcatatattttgagaaaaattggtGCTCATGTCAAGAATTTCCATTCCAA
TGAAAAAGAATTGGAATCTTTTCTCAAAGAGCTGGGTAGCCCAAAACATC
TTGATGTCTTGCACCCTATGATCGCACCACCAACAATCAAACACGATATG
AAACTTGTATTTGATGAATTGGAAGATgtggaaaagaaaacattggtGCA
GCTGTGCGGCTTTCCTGAAATCATCCCTGTCGATGCACTTGAACACATTT
TTACATCTTCTGTCTATCATACATGCAACCACTTATGCATTAATCATTGC
ATTATTGAAAAGTCTAGCTCCGGAACATACTTCAAAATGAATCTTTTAAC
AAGATCATGTATCAAAGACTTCGCACAATCTGATCCAGCCTTAAATCAAG
TCCTCACAGAAGCCAAAATAGAGATTaacaaatactatttgaatCTCATC
AAATCCTTGGATGAGATTTTCATATTTCCCTGTAAACTCGAAAAGAAAAG
CAATTGTTTTAATTTGGTCTCTGATTATCAAGAAAAATGCACATTCTGCC
CTGAGGACTGCTCCTGTCCGACAATCAAAATTGTAAAGTATCTTTTTCGT
ATCAGAAAAACTCTGATCATGCGAGCCATTCAACAAGGCTTATCTAGTGA
CATTCAATTCCATGAAACAGTGGAAATTGCATTGAAAGTCGTACACTTTT
TACGATTTGTAATGAGTAAAGGAGATTTGCTGGAAATgtatgatgaaatt
ttcaatatttgtaaaaaaagagGAGAGAAGTTGTTGATGGCAATGGCTGT
TGCGAATCTTGTATTTGTGAAAGCTTATTATCATGTGAGGGAAGGAGTGG
AAGAAAACATCCATTACCTCACCAAAGCCATCAATGTGTTAGATGGTAGT
CAGATGTATTTATATGGTGTTACTTACACCCTTATTTATTGCTACATGAA
ACGTGGTCACTTATATACATTTACTTCTTGTAACCAAAAAGAGTGTCTGA
CAGACTTCAATCGAGCTGAGATGTTGATCAATAAgtttttatcagaaaaa
gaaCGACAACTCTTTCTCATGGTTTTGAGCGGTTACTGTTCAGCGTTTCA
TTACAGTACGAAAGATTTCCATAAAAGCATCGAAGTGCGGAAAACTCAAT
TGATTGGCTATCAAAAGCATTTTGGTGTCCACACACATTGTGCAAGAGCT
CTACACTACCAAAGTCATGCTTGCGGTAAGGTGGCTGATTATGGGAGCGC
TATCAAGTGTGCACGAGTGGCTTATGGTATTTACCACAAACTGTATGGAG
ATGGAGTTGAAACTATGAAGGTGCTGTCAACCCTTGGGAAAATGTACAtc
aaaaatggccaaatcgagaaaggttttcaaaagttagacCATGCTAAAAA
TGTTGCTGAAAATGCACTTGGGGAGCATGAAAAGGTTGCACGATGTTATG
AACAGCTTGCTGTCGTCAAGAAAAGTCATGGCTTCTCCCTAGAAGCTGAC
GAATTAGAGCTCAGAGCAAAAGCCATCCGTACAAACTTTGAAAGAAAATC
AAGCATTAACATGAAGAAATATAGTTTGCAGTTGTCAAAGGATCATTTGG
GTCATGACATTTATGCACTGAGCTCAGATGAAGTGCCAAAGAAGGATCAT
TATACACAGGTGGTGTTTTTGACCATGTTTATTGCCATCATATGGCGTTG
CTTTGAAATTTATTACACCTGTAATTGTGATCGGTTTTCATTTTAAttta
ggcaaaataaaaatttgaacaatGAAATGAATATATCAAATACTTGCTTT
CAAGGGCACAGAAATTGTGTCCTTATTTCTGATCACTTAGATTTCATTTC
TATCAATACTGTATCTGATTGGAGAAGAATTTTATTATATCTTGGCATTG
AACAAAATATAATCAACAGAGTCGAAGAAGATGGTAATTTGCGGAATTAT
GACTCGCGTGAAGTGGCTTATCAAGGAtatttgaaatggaaaaacatcgA
TCCCTACAAAGCATGCTTCTGTATTATTCAACAAGCTTTATCCAGAGCAC
AAAGAAATGATGTCACAAAATCactgaaagaaaaatacaaCTTTCATGCG
AGAAGAAGCATTCGCCACAATAGCTTCACATTTCCTATCGAAAATTTTGT
TGGTAGAGAGAAGGAGGTGGAGCAGATTATGCGATTTATTGATGATTCCA
ATGCCAAAAAGAAATTAATGGTTTTGTGTGGTATGCCATGTGTTGGAAAG
TCTGCCTTGGTCCACCATGCAGTAAATAAGCTAGTCCAAAATCAACCTGA
TGTTGATGTCATTCGTCCTCTTTTTATTTCTAAGAAAGGGGAAACAAGTT
GGGGTCTTGAAGATATTGCAGTCAATATATTGGAGGAGATACATCCTGAT
CAAGAGTACATCAGTTACAGAGTAGCTGCTTTGCATAAAATATTGATAAG
CTTGGAGAAACCAATGCTTTTGGTTCTTGAGCTGTGCGGTGTGGAGATCA
AGAAGAACACAGTGACAGGATTCTCATTATTTTTATCCAGCTTATTGCAT
GCCTCTAACcaacatttgaaaatcattCTGACAGCTTACAAGGCAGCAGA
TATTTTGAATCCACGACATGAGATATCATATGAAGAAATGCAACTCCAGG
GTCTTTCACAACCAGAAGCTTTAAAAGTCCTACGTGCTATAAATCCTCGA
ATGACTAACATGAATTGCAAACGGCTCTATGATAAATGTGGAGGTCATCc
atatattttgagaaaaattggtGCTCATGTCAAGAATTTCCATTCCAATG
AAAAAGAATTGGAATCTTTTCTCAAAGAGCTGGGTAGCCCAAAACATCTT
GATGTCTTGCACCCTATGATCGCACCACCAACAATCAAACACGATATGAA
ACTTGTATTTGATGAATTGGAAGATgtggaaaagaaaacattggtGCAGC
TGTGCGGCTTTCCTGAAATCATCCCTGTCGATGCACTTGAACACATTTTT
ACATCTTCTGTCTATCATACATGCAACCACTTATGCATTAATCATTGCAT
TATTGAAAAGTCTAGCTCCGGAACATACTTCAAAATGAATCTTTTAACAA
GATCATGTATCAAAGACTTCGCACAATCTGATCCAGCCTTAAATCAAGTC
CTCACAGAAGCCAAAATAGAGATTaacaaatactatttgaatCTCATCAA
ATCCTTGGATGAGATTTTCATATTTCCCTGTAAACTCGAAAAGAAAAGCA
ATTGTTTTAATTTGGTCTCTGATTATCAAGAAAAATGCACATTCTGCCCT
GAGGACTGCTCCTGTCCGACAATCAAAATTGTAAAGTATCTTTTTCGTAT
CAGAAAAACTCTGATCATGCGAGCCATTCAACAAGGCTTATCTAGTGACA
TTCAATTCCATGAAACAGTGGAAATTGCATTGAAAGTCGTACACTTTTTA
CGATTTGTAATGAGTAAAGGAGATTTGCTGGAAATgtatgatgaaatttt
caatatttgtaaaaaaagagGAGAGAAGTTGTTGATGGCAATGGCTGTTG
CGAATCTTGTATTTGTGAAAGCTTATTATCATGTGAGGGAAGGAGTGGAA
GAAAACATCCATTACCTCACCAAAGCCATCAATGTGTTAGATGGTAGTCA
GATGTATTTATATGGTGTTACTTACACCCTTATTTATTGCTACATGAAAC
GTGGTCACTTATATACATTTACTTCTTGTAACCAAAAAGAGTGTCTGACA
GACTTCAATCGAGCTGAGATGTTGATCAATAAgtttttatcagaaaaaga
aCGACAACTCTTTCTCATGGTTTTGAGCGGTTACTGTTCAGCGTTTCATT
ACAGTACGAAAGATTTCCATAAAAGCATCGAAGTGCGGAAAACTCAATTG
ATTGGCTATCAAAAGCATTTTGGTGTCCACACACATTGTGCAAGAGCTCT
ACACTACCAAAGTCATGCTTGCGGTAAGGTGGCTGATTATGGGAGCGCTA
TCAAGTGTGCACGAGTGGCTTATGGTATTTACCACAAACTGTATGGAGAT
GGAGTTGAAACTATGAAGGTGCTGTCAACCCTTGGGAAAATGTACAtcaa
aaatggccaaatcgagaaaggttttcaaaagttagacCATGCTAAAAATG
TTGCTGAAAATGCACTTGGGGAGCATGAAAAGGTTGCACGATGTTATGAA
CAGCTTGCTGTCGTCAAGAAAAGTCATGGCTTCTCCCTAGAAGCTGACGA
ATTAGAGCTCAGAGCAAAAGCCATCCGTACAAACTTTGAAAGAAAATCAA
GCATTAACATGAAGAAATATAGTTTGCAGTTGTCAAAGGATCATTTGGGT
CATGACATTTATGCACTGAGCTCAGATGAAGTGCCAAAGAAGGATCATTA
TACACAGGTGGTGTTTTTGACCATGTTTATTGCCATCATATGGCGTTGCT
TTGAAATTTATTACACCTGTAATTGTGATCGGTTTTCATTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000599XLOC_000599Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001059-proteinTCONS_00001059-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001059-exon-sc0000007-1491911889:1161088..1161440TCONS_00001059-exon-sc0000007-1491911889:1161088..1161440Clytia hemisphaericaexon
TCONS_00001059-exon-sc0000007-1510915933:1161088..1161440TCONS_00001059-exon-sc0000007-1510915933:1161088..1161440Clytia hemisphaericaexon
TCONS_00001059-exon-sc0000007-1575043694:1161088..1161440TCONS_00001059-exon-sc0000007-1575043694:1161088..1161440Clytia hemisphaericaexon
TCONS_00001059-exon-sc0000007-1491911889:1162750..1164492TCONS_00001059-exon-sc0000007-1491911889:1162750..1164492Clytia hemisphaericaexon
TCONS_00001059-exon-sc0000007-1510915933:1162750..1164492TCONS_00001059-exon-sc0000007-1510915933:1162750..1164492Clytia hemisphaericaexon
TCONS_00001059-exon-sc0000007-1575043694:1162750..1164492TCONS_00001059-exon-sc0000007-1575043694:1162750..1164492Clytia hemisphaericaexon
TCONS_00001059-exon-sc0000007-1491911889:1164757..1166368TCONS_00001059-exon-sc0000007-1491911889:1164757..1166368Clytia hemisphaericaexon
TCONS_00001059-exon-sc0000007-1510915933:1164757..1166368TCONS_00001059-exon-sc0000007-1510915933:1164757..1166368Clytia hemisphaericaexon
TCONS_00001059-exon-sc0000007-1575043694:1164757..1166368TCONS_00001059-exon-sc0000007-1575043694:1164757..1166368Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:1161088..1166368 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.90052	3.80984	1.49263	1.35784	9.75059	7.89118	6.85995	7.45791	4.4619	6.67308	5.98061	3.27779	5.20384	6.43659	5.02989	5.46541	6.5208	5.96019	5.41352	5.8106	5.59915	4.89646	7.60254	8.50101	4.39085	5.24994	2.74481	2.59715	5.30193	5.02357
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR002182NB-ARC
IPR000488Death_domain
IPR027417P-loop_NTPase
IPR011029DEATH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0043531ADP binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0043531 ADP binding
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001059 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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