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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001063 ID=TCONS_00001063|Name=TCONS_00001063|organism=Clytia hemisphaerica|type=transcript|length=1200bp
TCCACTGGTTTTCTCAATAACACAACGCCCAATCCTTTGGACGCTGTGTT
AGGCCCTCAACCCACTCCAAAAACGACGACCTTGAAAACGAATCCTCCAC
ACATGTATCCTTCATCTCAAGTAAAGCAGGACAATCTTGTTACAGATACA
CCTTTTTCAAGAAAGCCTCTCGCATCTACAACAACTACGACCAAATCTGT
CCCTTTGATAAAAGACATGGCTGAAAGGCCATCTACAACGACCACTACAT
CAAGTACGACATTCATGAGATCAGCAATGAGCACTATCAAACCAGCAACA
TCAACTAAAACTTCCACAGTAGTGACACCTGTTCCAACAATAATGGAATT
TTTACAAACGAACCAATCAACAACAGATTTACCATTGACCAcTCCAAAGA
AGACGCATATTCACACGAAAACACCAAAGAACGTAACCAAGTCATCTTCA
AAGGGGGTCATTGAGGCAGGAAGTGGAATTTCTCATTCTGATAACATCTC
TTTAACTGGTGCAGTTTTCTTTGGACTTGCTTTTTCCTTTGTGACCATTT
ATTTAGTTGGTAAACGGTGGATAGAAGGACTTCGAGAATCTAAAGGCAGG
CGTGGTTACACTCGTATTTCCTATCTTCTAAATGGAGTTTGAGTTTCGAT
ATTCGTTTGAATATATTAGGTTTGATAAGTTAGGGTTCGTAGATTTCGAT
ATTCGTTTTTGAGTATCTGTTTTTTGGATATTTATCGACGTTTGTAAATA
TAAGTTATTTTGGAGTAAAATGCAATAAGTTCTCATCAAATTACATCACA
AATGTTTTCAAGGAACAAAATTTTGACACCCTGACTTCTTTATTCGTTCT
CAGTTAATACACTATTTTTGGAGACtctaaaaaaaactttcctGATTATT
TGACTTAATTAGGTTTGCTTCTCCGTTCTAGATGTTATATTTTGATGATT
GTTATCTATAATCATTcttaaaatatttaatttttggttgtacatgtttt
tttttaccttgCTTTATTTATTTCACTTGATGATTCACTTGAAAAAGGGA
TAATTTCGTAATATTAGCGTCTTATATACATTATTcacatcatttttgaa
attatgcatTTTTAAGAATGATATTTTGTACAACttgataaaaaatatga
aagagcttgaatttaaaagaagaatttttcctTCTCATATTCATCTAATT Run BLAST on NCBI transcript from alignment at sc0000007:1254222..1256195+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001063 ID=TCONS_00001063|Name=TCONS_00001063|organism=Clytia hemisphaerica|type=transcript|length=1974bp|location=Sequence derived from alignment at sc0000007:1254222..1256195+ (Clytia hemisphaerica)
TCCACTGGTTTTCTCAATAACACAACGCCCAGTAAGTCCACTGGTTTTCT
CAGTATCTCATCTCAATTAATATTCTTATGCCATATTCGATCATATTTTA
ACCATTCTTATTTCTCGTTGCCTATTCACGCCTAAAAATTAGAGATTTCA
ATTCTCTTGAAACAAATCTTAAAAAGACCTATTCATATATCTTTTTTAAT
AGGCATAATTTTTAATGTCTTTTTATTTCAGATCCTTTGGACGCTGTGTT
AGGCCCTCAACCCACTCCAAAAACGACGACCTTGAAAACGAATCCTCCAC
ACATGTATCCTTCATCTCAAGTAAAGCAGGACAATCTTGTTACAGATACA
CCTTTTTCAAGAAAGCCTCTCGCATCTACAACAACTACGACCAAATCTGT
CCCTTTGATAAAAGACATGGCTGAAAGGCCATCTACAACGACCACTACAT
CAAGTACGACATTCATGAGATCAGCAATGAGCACTATCAAACCAGCAACA
TCAACTAAAACTTCCACAGTAGTGACACCTGTTGTGagttttataatatt
ttttctaatcCACGATACACATCTCGCATGATTACTCCTTTTTTCCTATC
AGAACCATATAGACCAGCAAGCATGACCTGTATAGACCGCAAAACTGGAA
TTAATTTCTATTAGaggtgaaatttatgacttttaTCTTTTGAAATCATC
TGCAGATCGTCCAAAAACTGAAAGCCTTAGAAATCGCCAAAATAGTTAAA
TATATAAGTTGATATATTCAAAGTCTTTTAATGTctattttgattaaatt
ttaaAGTACACCTTTTCTTCTACTTTCCAGCCAACAATAATGGAATTTTT
ACAAACGAACCAATCAACAACAGATTTACCATTGACCAGTATGTTTTCTT
TCTCATGCTCTCTTTTCTCCATTTACCTTTAAAACTTTCATGGGCTCCCT
CTTGTTTGCGAATCAGTCAGGCTTGATTTATTGATGTTTTGGTTGGTTGA
ATATATTTGAAATAAGTTGATGTTTTCGTGATAAATTTTGTCTTCGTCAA
GCATTAAAGTAAATTTCCAATGTCACGAGACTCGTCATTAGAGACTTCAA
AGGCTAAGAATACGttcaaggttaaaaaaaacTCTAATATTCACAGccaa
tgttttttgttttagcTCCAAAGAAGACGCATATTCACACGAAAACACCA
AAGAACGTAACCAAGTCATCTTCAAAGGGGGTCATTGAGGCAGGAAGTGG
AATTTCTCATTCTGATAACATCTCTTTAACTGGTGCAGTTTTCTTTGGAC
TTGCTTTTTCCTTTGTGACCATTTATTTAGTTGGTAAACGGTGGATAGAA
GGACTTCGAGAATCTAAAGGCAGGCGTGGTTACACTCGTATTTCCTATCT
TCTAAATGGAGTTTGAGTTTCGATATTCGTTTGAATATATTAGGTTTGAT
AAGTTAGGGTTCGTAGATTTCGATATTCGTTTTTGAGTATCTGTTTTTTG
GATATTTATCGACGTTTGTAAATATAAGTTATTTTGGAGTAAAATGCAAT
AAGTTCTCATCAAATTACATCACAAATGTTTTCAAGGAACAAAATTTTGA
CACCCTGACTTCTTTATTCGTTCTCAGTTAATACACTATTTTTGGAGACt
ctaaaaaaaactttcctGATTATTTGACTTAATTAGGTTTGCTTCTCCGT
TCTAGATGTTATATTTTGATGATTGTTATCTATAATCATTcttaaaatat
ttaatttttggttgtacatgtttttttttaccttgCTTTATTTATTTCAC
TTGATGATTCACTTGAAAAAGGGATAATTTCGTAATATTAGCGTCTTATA
TACATTATTcacatcatttttgaaattatgcatTTTTAAGAATGATATTT
TGTACAACttgataaaaaatatgaaagagcttgaatttaaaagaagaatt
tttcctTCTCATATTCATCTAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001063-exon-sc0000007-1491911889:1254222..1254252 | TCONS_00001063-exon-sc0000007-1491911889:1254222..1254252 | Clytia hemisphaerica | exon |
| TCONS_00001063-exon-sc0000007-1510915933:1254222..1254252 | TCONS_00001063-exon-sc0000007-1510915933:1254222..1254252 | Clytia hemisphaerica | exon |
| TCONS_00001063-exon-sc0000007-1575043694:1254222..1254252 | TCONS_00001063-exon-sc0000007-1575043694:1254222..1254252 | Clytia hemisphaerica | exon |
| TCONS_00001063-exon-sc0000007-1491911889:1254453..1254754 | TCONS_00001063-exon-sc0000007-1491911889:1254453..1254754 | Clytia hemisphaerica | exon |
| TCONS_00001063-exon-sc0000007-1510915933:1254453..1254754 | TCONS_00001063-exon-sc0000007-1510915933:1254453..1254754 | Clytia hemisphaerica | exon |
| TCONS_00001063-exon-sc0000007-1575043694:1254453..1254754 | TCONS_00001063-exon-sc0000007-1575043694:1254453..1254754 | Clytia hemisphaerica | exon |
| TCONS_00001063-exon-sc0000007-1491911889:1255052..1255109 | TCONS_00001063-exon-sc0000007-1491911889:1255052..1255109 | Clytia hemisphaerica | exon |
| TCONS_00001063-exon-sc0000007-1510915933:1255052..1255109 | TCONS_00001063-exon-sc0000007-1510915933:1255052..1255109 | Clytia hemisphaerica | exon |
| TCONS_00001063-exon-sc0000007-1575043694:1255052..1255109 | TCONS_00001063-exon-sc0000007-1575043694:1255052..1255109 | Clytia hemisphaerica | exon |
| TCONS_00001063-exon-sc0000007-1491911889:1255387..1256195 | TCONS_00001063-exon-sc0000007-1491911889:1255387..1256195 | Clytia hemisphaerica | exon |
| TCONS_00001063-exon-sc0000007-1510915933:1255387..1256195 | TCONS_00001063-exon-sc0000007-1510915933:1255387..1256195 | Clytia hemisphaerica | exon |
| TCONS_00001063-exon-sc0000007-1575043694:1255387..1256195 | TCONS_00001063-exon-sc0000007-1575043694:1255387..1256195 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007 | supercontig | sc0000007:1254222..1256195 + |
Blast
The following BLAST results are available for this feature:
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