TCONS_00001245 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001245
Unique NameTCONS_00001245
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length850

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001245 ID=TCONS_00001245|Name=TCONS_00001245|organism=Clytia hemisphaerica|type=transcript|length=850bp
CCGAGATTCCTGGAACTAAAATTTTGGAAACAGCAGCAGAATCTGGCAGT
CTGACACTAGCAATTATCAAACCAGATGCCATCGAAAATGCTTCTGAAAT
TGAAGAAAGAGTTTTGAACGAGGGATTCACTATATTGCAGACTCGAAGAG
TGCACTTGACGCCAGAACAAACAAGTGAATTTTATGTTGAGCATTATGGA
AAAATGTTCTTCCCTAGCCTGGTTGCTTTTATGAGCAgTGGTGACATATT
AGCCATGATATTAGCCAGGAAGAACGGCATCAAACATTGGAGAAGTGTCA
TTGGACCAACACAAACTTCAAAAGCAAGAGATGAAGCACCAGATAGTTTG
AGAGCTTTATATGGAACAGACAACCAACGAAATGCTGTCCATGGTAGTGA
TAGTCCTGATTCTGCGTTGAGGGAAATTCATTTCTTTTTCCCTAATGCTA
TCTTGGAGCCTTTACCAACGAGCACAGAAGCAAAAGATTACCTAACACGT
GACGTCAATCCAACCTTATTGCAAGGACTCACTGAACTATGCAAAAGAAA
ACCTACTGACCCTTTGATCTGGTTGTCTGACTGGTTAGCAGAAAACAACC
CCAACAAACCAATCATCAGAGAACCAGGTGAAATTACAGAACCTTCTTCA
GATTGAGGCTTTCGctgaaaaacttttattttattgtacATAACTGTTTG
ATTACTTTGGTGATTCGTGTAAATAAAAGACTGCTAAATTATGATCATTA
TTTGCTAATTCTAATTCTTCTCTGAAATATCCATCTTGATATAATTCCAT
GTATTGACCATTAGGAATCAGGACTGCTTGTGCTTAGATACAAATTGCGG
Run BLAST on NCBI

transcript from alignment at sc0000007:1213442..1232483-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001245 ID=TCONS_00001245|Name=TCONS_00001245|organism=Clytia hemisphaerica|type=transcript|length=19042bp|location=Sequence derived from alignment at sc0000007:1213442..1232483- (Clytia hemisphaerica)
CCGAGATTCCTGGAACTAAAATTTTGGAAACAGCAGCAGAATCTGGCAGT CTGGTAAGAATTCTCAAACTTTACATTATATTTCCCCCTCTTACTCTAGG GTTATTATGACATGCAGTGTAAAAAGTACTTTTCTGTCTCAGATAATAGA CCTTTTTTCAAAGAGGCTGTCCTGTTGAATAATTATGTAGTCCAGCCATA AAAACAATGATAGAGCCATATCATGCATAGAGAGTCAGTTCGCCAGTGCA CAAACGGCCCCAGTGCACGAACGAGCGTCTTTGAACTTGAATAAAACAAC CAAAAACAAACTTCTATAGAACTTCCTTTGTGCAGCAGAATCCTCAAACC ATTCCTTGCAACCTCTCCAAAAATTAAAATAAACGGAGCACTAAAACAAC ACCAAACCGATTTTGAACGAACGAGGCCAAGTAATTCGGGATTTTTGTAA ATATGGCTGATCGCGAGAGAAAATGTTTTTTATAAGAAAATTTGCGCAAG AAGAGTTCTGAAAATGACTTTCCTCTTTTAAAAACCTTTTATCTTCCATC ACACAAAATTTCATTGAAACATGTTAGCTCATTAATTCAAAATCAATAGA AACATATCACCAGTAGTTGATATAAAAAAGGTTCCAGTCCGCGAACGATC CGAACACCATATTCAAAAGGAAGACATTGCAACGTCAAAACATTCGAAAG CGCTGGCGATCTCAATTAAAAAAAGAAGACACTACATTGCCGCGCTTTTT TCGATGAGCAAAACTTAAAAAGGAAAACAAAAAAATGGACGACAAGAAAA TATTTACAAAAATAAACAGGTTAGTAAAACACTAAAGTTCTTATAAAACA GACGCTTTTTTAGTGAGAAAGCGCGTGGTTTTGAAAAGTTCAAATACCCC TGTATCATCTCGGAAGAGAGTTAAAGTATTACCTGCGAGCAGAGCTCTAA TTTTTCTTTCAAAAGATCGTTNTCATCTCGGAAGAGAGTTTAAAGTATTA CCTGCGAGCAGAGCTCTAATTTTTTCTTTCAAAAGATCGTTCGCGAACTG GTTCCTCGTTTGCGGACTGGGTTCGAATAGCGCTCGCTTTAACGACTTAT TATTCCAAGAAGAAGCTTTCAAATAAAGTGAAAGCAAACTGAAAGAAGGA CTTCAAGCTTATTTACGAGATGGTCAAAAAGGATTTATGTAAAAACCAAA AGTAAGTGAGAAAAGTAAAAAATAAGTTTGCCGTTCGTGCACTGGGCACC CCCTCTAATTACTCTGATTACTGTATCATGCATATTGTAATAATTATGCA TGGTTTTATAATTGATTTTCTGCTGGACTACATAATTATTCAACAGGGTG GCCTCTTTGAAAAAAGGTCTATAATGAGGGGTCACTTTTGAGAAATGGTA AAGTATAAGAAAAATGGATTGCCATGTGAAAAAAACTCACTTTTTTGGCA GTTAGTCACACTAGCGTCCCACCAGAATGCGTATCAAAGATTAATGCTGC GAAAGCGCTATATCGTTTACTTGACTCTCAAGCAATAAATGCGCCGCAAA ACTTCTAAACGGATTCATGGAAAAATAACCCGGCGCTTTTAAATGAAATT AACGTTCTCAAAAACTATGAGAAATTGCCTAAAATTTGAGCCATAGATGA AATAATTTGATCCAAGCCAACCTTGAGTGACCTTGAGAACTAATTTGAAG ATCAACTTCCCAAGAAAAAGATCTACGGAGGAGACGGAGCCCACCTAGAT CTGCGCACTGCCGGGATAGGCTATTTCCCGGAAATTTTGCCTGACCTCAA ACACTGACCGATTTACATGTGCGGAATTGTTTTTACTTTAGCGTATAAAC TAGGCCTTAAAGATCGAAGGGAAAAGATGTGAGCAACATGAGTGTGATTA AATTGTTAATAACTTCTTCAAATTATGTACTTTTAAAATGCTTTAAAAAT ACATTTGGTTGTGATTATGAGATGGTGAAAGTTTGATTGATAAACTTCGC AAGGAAAATGGAGGAAAAAATCGATGAAAATGACAAAGAATTGCCGCTTG AAAATGAGGTTTGCAGCTGTTGCACCCCAACAAAATGCATTATTAGAGAA GAAACAGAATGCGGAATTGTGTCTGAAAGAGGTTAGTTATGCTGAAGTTG TATCTAAACAGATGAATCAAGAATCAAATAAGGTGGAGAAAATGGCTCAA AGTGAAACAGTCGGCAAACAACGATCCACAGCATGCAATCTAATTTTCCA TGGAATCAAAGAAAATTTTGAGGATCCCGAAAATACAACGAAAATCTACG ACGAGAAATTTATTAAGTACAGAATCCTTGGATTACAACTGGGTATCAAG GACATAAAAATTGTAAACACACAGAGGATTGGAGTTTTCACGGAAGAGAA AGAGGAGGAAGTAAGGTATCGACCAATCAAGGTAGTTTTCAAAAATGAAG AAGACAAGAACAAAGTCTTAAGAACCATCACGACATACAAAGGCCCTCCT TCATCCTATCGAGCAACAGAAGACCTCACAATTATTGAACGATTGACAAT CAAAGAATTTAGCAAGAGAGCACGCGAGCTCAATGCTCAAATGAAAGATA AAACTATTCAATTTAAAGTCAGGGGAAGCCCCAGAACAAAATTATACCTA AAGAAAATTGTAACAACAAGCGTTTGTAAAAAGATAGGTTCTTAGAGGCC CATGGCGCGCCTTGAACCTCAATCCTTAAATAAATAAATAAATAAATAAA TAAATACAAAATACATAAATAAATAAATAAATAAATAAATAAATAAATAA ATAAATAATGAAAGATTCTTGGAATATTTTTTTTTCATTGTATCTAAACT TGGTTTAAGTATAAAAACAAACTTGTTGTCAAAGAGATTTAAACAGTAAA TGAAAATACAGTCCAGAAATCAACCGTCCCAGAATTTGAAAAAACTTCTC AACTATCATGTACGTTTTAAGGGGTGACGTCCATATTCATAGTCGTCACG CGTAACTGGAAAAGACTGTTACTTTCAAAACATACCTACCTACCCACCTC CTTAACGGTCTTCATGGTCTTCCATTCCTCCTAAAATCAAAATAAACGGC CCGCTACAAAGTATGCCATTTTCGAATTCCATCACAATTTTTAAACGGCC TTTGTTTTTAAAACTCCAGAGGCAAGAATGTTATACTCTGAAACCACCCC TAGGAAGGATTTTGGATAGCGTGCTAAAGGAAAAAGCGAAGAAGTGAGCG CTACGGTAAGCGGTCTTTTATTTTTTCCTTGGAATTTTTAGTGGGATTTC ATTTTGGTCATCAATGCCACAGCTAACTCTCAACATTCGGATATACCTAC CCACTAACGGTCTTTTCCTGTTACGCGTGGCAACTTTGAATATGGACTCT GTCCCTAAATAGCAATCGTTATCAATTGAAGCGATTAAATGGGCTGTTGG AATTTTGTATGGTGTCAGTAGCTTTTTTGTTTACAAATCTTGCCTCTGGT CAGAAAGAAAGCGTTCTGTAATAAATTCTGGTTTGATTTAAAAAAGAATG AAGCAGTTTGATGCATAATTGTGAATTTATGAGGTGAAGAAAACAAGTAA TCTCTTTTTTTCTTTTTTTAAATTAAATGGTGCCCCATCTTTTGTATTCG CTACCTATAGATCTTTAATGCAGTAAAATGGGCTAGAAAACAATCGTGAT CTGTCTGTTATCATGTAAACGCTTGCAATTCATGCCCTTGGGACTCTTGT TGGTTATAAAAACAGATTCCATTGAAGATCATATACTTTTTTCTCAATAA TCACAGTTTTTCAAAAGAGGTTTTTTTCGAATTGTTTTCACTTTTAAACA CGTCAAGCAATTTTTAATTATGTTAGCTCAAAAGTCAGCCTTTTTCCTTC CAAATGGAAAAAAGATTAGATTCATTGCTTTTAGCTTTCTCACAATTTCA TTTCAAACTTGTAAGTTGTACACTTTTTTTTGAAACAGCCGGTGCTAAAA GTTATAAGCGCGGTTATTTTTTTGATTAACCACAAAAATTGCGTAACCTT CGAACCAAAATATTGGATATTTAAGCTTTAAGTTCCATTCAAAGTGCAAA ATAATTTTTAAAGAAAACCTCACAAGATTGCTTGTAATTTCTGAATTTGA CCACCTGTCAATCAATTTCAAACTTATGAAATCATCGGAGAGTCACCAGA ACATCTTTTCAATCTTTTCAATATATCATAATCAAATTCTAATTGAGGCA GGATGACTATTTTGTTACAACAGAATTACATTGAAAAATTGAAATTTTGG CTGGTTACATTTCAGTACAGGGTAATACAGCGAAAGTTTGATCGAGGGGG TCAGTGGTGGTATTTTGTTAAGAGTAAAATAGTATTTGATGCAGTTGCGT TTGGCAATCTGATTGAAATCCTTTGGTTTGATTGAAGTAGGGTGGGGCGT CAAATGTCAAAGTCAGAAAATTCAAGATGTAGTGTTTTTTTATGAAAATT TAACCTATTTTAAGGCATTCTGCGCAATTTTTAAGGTCAGAAGTAAAAAA TTGGTCGAACCCCCCTGGGGGTACTGATTCGCACTACAGGCTAAAATTGG AAAAAATGGTATTTTCTGGCCTTTTCAGGCCTGTAAATTTGTCAAAACTA TTTCAAATCTTATTTTTTTCAATTGCTGTAATAAATTTTTTGAAGACACA ACAAAATAATCATATTGGGTTGAAAATTGTGCCCATTGGAACCCTAAACG AGCCGTTTTAACCCTTTCCGGACGCATGATTTCACGGCTATATGACGCAA ACAAAAATTCGATTTTTGACTGGCTTCACTAAAATTGCAATAGAAAGTGA TTGATAAAAGATATCACTATAAGTAATACCTCGTTTTTTTCACATGTAAT AGGGGTTTTGAAATACCAAAAAAAAAACTTTAAATATGGCTGACACCTGG TCACGTGACCGAAAAATCAGCAGATTTTTTTTCGGAAGGGCAAAATTTTT TACTTTGAATAAAGAAATAGAGTAAAAGGCATTTGCTTTACGCCTTGAAC TTTGAATATGATTTAGAGAATTGAATTACTGATCGGGTAAAAAAAATTTC ATGTCATAAGCCTTCCAAGAATCTGAGTAAAGTGATTTTTTGTTCAAATT TTTGAGCAATTTTTCCCTTACAGATTTAGCCTGAGTAAATTTGCAACAAA CATTGAAAATTTATAATTCTTGTTTTAAACAAGATATCGAAAAGCGTTTT TTTGCAGGTTACGGGAAATTTATCTCAAAATCATTATTCAAAACCATGTT ATTGTATTTTGGCGCGAAAACTGTTAAAATCTTTTACAAAGCTACGGGCC ACCCGGTGGCCCGTGCGTCATATAGGAACATGATTCATGGGCCACCCAGT GGCCCGTGCGTCCGGAAAGGGTTAAGCCAATTTTGGGTAGCAAAATGCTT TTTAAGGCCAATTTTGCAAGTTAGTAAACTTTAAGCTGATTAATTCACAT GTCTGAAATTTTCAGAGATGGAAGTCTTCAATAAAGTCTTTAAACAAAAT GAATTTCAAGTTTTTCACTTTTTTTAAAAATTCATAATGGTGTTTTCAAA AATTCTTTTTAGTAAAAAAAAATTATATCTATCTAAAAATAGCATATTTT AATGAAAACTTCTACAAACTGAGTTTAAATGCTGGCTGAAATTTTTTTGA CAGTGATAGTATTTTGGAGATACTCCAGGAAAATCAAAATCATTTGGGTC TGGGATGCGTCTATGTCCGCCATTTTGGAAATAAAATCCCTGCTAAGGAG CCATTTTTCAGGCAAAAACGCAAATTTGGACTGAAAAAATCTCTAAAATG ACAATAGACATGGGCCCGAATTTNCCAAATTTGGACTGAAAAAATCACTA AAATGACAATAGACATGGGCCCGAATTTTCTTGCAGTGATAGTATTCTTG AAATACTGCAGGAAAATCAAAGTCATCTGGGTTTGGCATTTGGGTATATC CCCCATTTTGGAATTGAAATTCCTGCTAAAACGCAACATTTCAAGCAAAA ATCCCATTTTTGACTGAAAAAATCTTAGGAATGGCAATAAACATGAACCT AAAATCTTTTTGCAGTGATAGCCTTCTGGAAATACTCCAGGGAAATCAAA ATCCTTTGGGTTTAGATAAGGGTATCCGCCATTATGGAATTGAAATATAT CCTAAAATTTGCTTAAATGCAACGTTTCAAGCGAAAACCCCATTTTTGAC TAAAAACTGCTATATAATGGCAATAGACACGGACCCAAATTTCTTTGAAG TGTTAGTATTCTGTGAATTCTCCTGGGAAAACAAAATCATTTGAGTCTGG GATTTGTCTACATCCACCATTATGGAAATGAAATCTCTGTTAAAATGCTA CATATTTCCATCCGATATGCAGGGCCTATTACGAAATTCGTTTTTCTGTT GGATGGACTTTCGATAGTTTAAGGCTTATTTAATAAAAATTGTATATCCT CAAGCCCTTCTGACTATTGCTTAAAGAAATGTACCTAAGGCAAGATTTGA TTCAGGCAAACAGAACAGAAATTCGAGCTATGTAAATTTTTTAATTTATC AAATACTTTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNTACATTATTACTTTTGGCATGTTC TTATAAAAGCCTTTCACCAACTGAATTGCAACTGGTGCTTTTATTTATTT GATCTTTTTCTTTGTTTGATGATCAAGTTAATTAATTTGATCTTTCTCAA AAAAGGTGAGTTTATGCACGCGCTCTTCATTAAAAAACGTCTTCCCTACT TTACCACAACATTGTAAATTTTTGTTTATAACCCTGTCTCAATCCAATGC ATTTGGTTGGTTTAATCGGAAAAACGTTTTTTTTTTAAATAAAAAGGTTA CAAGATATTCAATTCAAAGCATGGGCAAAAAAGTTTATGTTTTGATCATT CAGGAAATTGTACGTATGTACCCTCTGAATTATTGAATAGAAAAAGAGAA AGAAATTTGATTTGATTGTTGAGGTTAAAATATATATACACGCATACTTT ACATTGATTTTCCAGGAATACAAAAGAAGGAATTAAAATATGTGATTACT AAAACCTGTAAATGCATAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA CCTGTAAATGCATAATTAGAATAATTAACATAATATATGCATGGATCGTG CATCGTGCATCGTGAATCGTTGGATCGCGCATCGTAAATTACACAAACCG TACTTTTTCTGTCGGAAGGATTCGATAAATATTAGTTTTTTTATTTTCGA CAGTAAATTTATTCTTCTATCGAATTTGGATGCAAAAACACCATCACTTC AAGTTTTTTAATTTGCTTGATGACTTATCTTTGAAAATAAAAAGGAAAAA TTACTTTAAGAAAATATTAATCGAAAAATTTCTATGAAATGTGAAATGGA ATAAATCTGTCGGAAGGAAATGTCGGATGGACAAACATTTTCAGAAATTT CAAGATTCTTTACAGTAAGTCGTTTATGGTTCTAGATCATCATAACTATG AGCTTTTTCATATCTTAAAACTATTTTGATGTGAATTGATTGTATTTTTG ATAATCGTGCTATGAAAATATTTGTCCATCCGACAGATTAACCTCGAAAA AGTTGTGCACACATTTCACCATACTCAACCCTCTTCATAAAAACTAGTCA GACTTTTTGTTGTTATAACAAAAATTAATACTTTTAGGATGCTTTAAAGA TATTTCTTTAAAATCAAAGGTGTTCCATGGTGTTCGAAAAATGCATGAAG AGATTTGGGGAAGTCCATCCGACAGATTAATAAATAGTTATTTTTCTAGG CTTTAAGCCATCATAAATGAAGTCATAATAAATTAAACTTTCAAAAACAT GATTCATGGAACCACTGAATACAGGAGGGACATTTGAGCCAGTCTTCACT CTCCTCTTCGTAGCTGTAAAGACCTAAACACTTGGCACATGTATTCTTCA ATAATGCCAACGACTCAAACTCCCTTTCCTCGTGATGACATTTCAAATTT TTGTCTTGTTGCTTCGACTTTTCGTAAATTTGTTCTGTATATGGGAGATG ATCATTGGATAAAAAATAAAAACTGNNNNNNNNNNNNNNNNNNNNNNNNN 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GCTTCATTGAAATGCCATTCTAAATCTAAATCCGGCCTATATTCAGAAAG GATTTTGAAGACAAAGCGGGAACGAAATTGTGCCCCCATGCCATCACTCC ATGCAATCACCTTTGTAAGAGCTATCGATTTCTCAATTTCCTCAATAACC ATCTTGACGCACGACATCGAGGCGACTCTTGAATGGTCGCTGCTTTCACT AACGATTGTCAATGATCGTTTCACCAAAGGATCGTCTGAATTATCTGCCT TGTAATACGCGCATGCAGTAAAAATGCTAAAAGACGTCTGTCCAAAATAG GCACTCTGGATTTCATCTTGTTGCTTATTACGATAACTCTCACTGTAATC AATGTGGATGATTGCCGTTCCAGGTTCTATATTCTCCTTCATGGCCACGT ATACAGCATGCTAAAAATAATATTTTAATATTTGATACAACATCTTAAGT AATTTTTGCGAGGAAGCCTTTGACAGTATTGTCTTTACTACTTCACTGGG AACAGGTTCTGACCTGTTAATGAAAATCCCTAGCTTTTAGCCTTTAATTA CAAAGAATACGTATATTTAACTAATGATTGTTTTGGTACTATTGAGATTA ATTGATTTAAACAAGCACTTGACACAAGATGTATATCGAATGCATAAAAT GACTATAGTAACATAATAGAATTACCTGTTCTCGCTTGCGATGAATGTGT TTCTTTAGAGTAGCTAGAGACGTTTCCCAGTCTTTAAACAGCTCATCACG AGTCTCCTTTGTCACAGTTGTTTTCTTTATTTTATGGTTTTNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCATTTGATGTTA AAGCCCTCTACACATGGAGATAAAATTATATTGGATAGCCAACTTTTTCG AATAAATCACGGCGTAATACTTCAGTTGCCATATACTTGTCATTTGCTAT CTGAAAGTGATAGATAAATACCAAAAATAGCATGCTTATTTGCAGTGAGA TAAATCTGTCGGATGGACTTTTACTTTTTTCCTAAGGCGAGGAAAAGGGT TANNNNNNNNNNNNNNNNNNNAGGTGACAGCTATATTTAAATTGAAGTTT TAGGACTATATTTCTGTCGGACGGACAAAATTTAAGATGCAATTTGTAAA TAAATGGTGCAAGTTATAGCTACTGCACCCGTTTTTATTTGTTAAGGCGA TCTCAAATTCGATAGATTTCAATTATTTAAAACTACTAAATAACAGAACA CCTTTCCTCTCAAACTTTTATTATTTCAAAAATCTGTCGGATGGACAAAT CGAATATGATAATATGATAAAAAAAAGTTATTCAAATTTGATGTTGCACC TTATATATACTCTTCATGCTACGGTTTATCATAAGAATGCGTTTTAATTT GTGATTACCAAAGGAAAATCTTTATCTTTTCCCAATATTTGAGCGTCCAT CCGACAGATTTTTTTTACGCTTGGGTTTTATGAGTAGACCTAAACCAGAT TCAAAATATGAACTTTCAAAACAACTATTGGTCCATTACAAAGCCCAATG ATCTGTTAAACAGTTTTGGCAAAAATAAACATAAATTTCCACATTTTCAA ATTTGGCCCTTAGGTTGACCTATTTCGTAATATGCCCTACATCATAATTG ACTAAATATTTTGTATATTACATTTAAAACAAAGAATATGAATTCATAAT CCTTTAATTTAGAAATACTAGTTGAAACAAATTATAACAATAAATCCCAT TCCACTCAACAATTCAATTTCCACATACATTTCCATTCTCAAGACTTGTT CCGTCAAAAAAAGATTGGATTTTTGCTTGAAATATTATATACATTTTAAA ACTGGCTTCAATTCAAAAATTGTGGTCCCAGAAGCATCTTATACCTAAAT AGTTTTTACCCCTGGAGTATTTCCAGAAGACTATCACTGCAAAAATATTT TAGGTTCATGGCTATTGCCATATTAGAGCAATTTTTGGTCAAAAATTGGG TTTTTGCTCGAAATGTTGCATTTTAGCCAGTTTTAGCACATTATTTCAAT TCTACAATGGCGGATATACCCAAATCCTAAACCCAAATGATTTTGATTTC CCTGGAGTATTTCCAGAAGACTATCACTGCAAAAAAATTTTAGGTTCATG TCTCTTGCCATTTTTAAGATTTTTCCAGTCAAAAATGGGATTTTAGCTTA AAATATTGCGTTTTAGCAGGAATTTCAATTCCAAAATGGGGGATATAACC AAATCCAAAACCCAGATGACTGTGATTTTCCTGCAGTTTTTCCAGAATAC TATCACTGCAAGAAAATTCGGGCCCATGTCTATTGTCATTTTAGAGATTT TTTCAGTCCAAATTTGCGTTTTTGCCTGAAAAATGGCTCCTTAGCAGGGA TTTTATTTCCAAAATGGCGGACATAGACGCATCCCAGACCCAAATGATTT TGATTTTCCTGGAGTATCTCCAGAATACTATCACTGCAGCAACAATTTCA GTCAGCATTTTTTAAAACTCAGTTTGTAGAAGCTTGCCTTAAAAAATGCT ATTTTTTGATAAACATAATTTTTTTTTGCTAAAAAGCGATTTTTGAAAAC GCCATTATGAATTTTTGAAAAAAGTGAAAAACTTGAAATTCATTTCGTTT AAAGACTTTATTGAAGACTTCCATCTCTGAAAATTTCAGACATGTGAATT ATCAGCTTAAAGTTTATGAACTTGCAAAATTGGCCTTAAAAAGCATTTTG CTACCCAAAATTGGCTTAAAACGGCTCGTTTAGCAGCGTTTAGGGTTCCA ATGGGCACAATTTTCAACCCAATATGATTATTTTGTTGTTTCTTCATAAA ATTTAGTACAGTAAATGAAAAAAATAAGATTTGAAATAGTTTTGACAAAT TTACAGGCCTGAAAAGGCCAGAAAATGCCATTTTTTCCAATTTTTGCCTG TGGTGCGAATCAGTACCCCCAGGGGGGGGGGGGGGGGGGGGGGCCCTTTT TTTTTTTTTTTTGCGTGGAGCGGTATTTCAAGGTCTGCGGGGGGGGGGGG GGGGGCCCTTTTTTTTTTTTTTTTGCGTGGAGCGGTATTTCAAGGTCTGC GGGGGGGGGGGGGGGGGAAACCCCCCCCCCCGGGGGGGGGGGGGGGGGTT CGGCCAATTTTGGACTTCTGACCTTAAAAATTGCGCAGAATGCCTCACAA TAGGTTATATTTTCATAAAAAAACACTACATCTTGAATTTTTTGACTTTG CCCCAAAAATGGCTGTTGACGCCCTACCCTAATTGAAGGTAATATTATTC TTGAAAAAAAAAGGAATATTCTGATGAATCACAAAAAATATTTCTAGTTT GTTTCAGCGAATTTTGTTCAAGCCACAAGAGATTACCTAGTCAGTTAGTA ATTCCCATCAACCAAAACTAAGATCCAAAAGTCTTAATATCTCTGCAATT GGTTGTTCTTCTCTGTTTGATTGAAAAAATTCGGGCTTTGCTGACATCAG GTGAATAACGAAGAAAAACTACCTTAAGTGGATAAATTTTGGTGGGGATT AAATTTGGCGAATTTGGCGAATTTTGCCAAAATATGGTAAAAAAGGTATA TGGCGTATTGTTTCGAGATGGCAGGAAGAGGAACTAAGATTTAGTTTCAT CATTTCAAAACACTTCTTCAATGTATTGGACTTTAATTCAGACATCAATT AGAGGTTTTCACAATTAATGTGAATATCTGTTGATTAATCAAACTATAAC ATGATAAAAGACAACCGTCGAAACGTTGTATACACTCAGGGTATTTCTTA TGTTTTACTTTTGATTAAACTACGTAGATAGAAATAAACGAAAATATGGA GATAGCATCATCATACATTCATGTTGAACAGACACTAGCAATTATCAAAC CAGATGCCATCGAAAATGCTTCTGAAATTGAAGAAAGAGTTTTGAACGAG GGATTCACTATATTGCAGGTTATTATTAGTGTTATATCACAATGTTCTTT TGTTATGATAATTTATTAAAATCTCTTTCATTATTTTCAAGGATTCTCCT GGATTCTCCGACTCGAATAGTTTTGAATCCCAAACCCATATAACATTTAG TTTGTCTTACTTTTTTATTTTGCTTGTTTATTCCTTTCTTTGTTTGTCAG TTAGTTGTAAAGAGTTGTCATTTTGTTCCCTGTGAATTTATGATTTTTTG GTCTTTTGGGCTGGCAAAATTCATCAATTGCCTGACCGTACCTCACCCGT GTTAGTAAAACTTTTACAGTCCGAATGAAACAAATTTTTATCATTTATAT ATTCACAGACTCGAAGAGTGCACTTGACGCCAGAACAAACAAGTGAATTT TATGTTGAGCATTATGGAAAAATGTTCTTCCCTAGCCTGGTTGCTTTTAT GAGCAGGTTTGTATATTTTTATACATATATCATTAGTTTCTTCACTCGAT TAGAGCTTAATCAGTCAAGTAATCCAAAAAATGTTGTGAATATTGAATTA TGAATTATTTCATTTCTAGTGGTGACATATTAGCCATGATATTAGCCAGG AAGAACGGCATCAAACATTGGAGAAGTGTCATTGGACCAACACAAACTTC AAAAGCAAGAGATGAAGCACCAGATAGGTAAATTATGATATCAAATTACT CTTGAAAATACGGGAAGGGCTCCCTTTCTCAAGCGATGAAGGATTTATAG ACCGGGTCGAAAATTACTAAATTATACCCGAAAGAGTCGACTCTTGGTAA TTTTAACCACCTTAGGGCAGATTCCAGAAAACTATTTGTTTTCAAAACGA TAACAATCAATAATAGACCTTTCCCGAAAGCCACCTAAAAATTAACTTCT GTAAAATGTAAATTATATATGATTAATCTAACAGCACAGTTCAGCTTTTT TTGGTCTAATGAGAAATCCCTGAAAATTTTGTTTCATTTTGTCCACTAGA TCAAAAGATATTTCACTTTCGTTTTCTACAAAATTTCACTTATTTTGTAA GCGTCCGATTATTTTCCATACCCCGCCTCGTTTTCATGTAAACATGATTT AAACCTTTATTGTGAAGCAATGAGAAATGCTTTTAATTTGAAATTTTCAC AAGATACTCACTTTTATATGAACTACTTGTTAAAGAAAAAATCGTTTTGA AATTCCAAGTTTAAATTTTGAGATGACGTCATAAAATTATTTATCACGTG ATAGGTTTCGGGAAAGGTCTATTATAGTGGTTATCTTTTCTAATAATCAC TCTTATACTTAGTCTATGTAAGACTGATAATCACACGAGTGTAGGTGAAA AATCTGAATGCGATAAGTTGAAGATACCAAAACATCACGTACGCAGAACT TGACCTAATTAATTTTTAGGATAGAAACGAATTATTAAATGGTCTTCTTT CAAAAGAAAATGTTATATTTTGAACAGCGGAATAATTTTAAAACTGAAAT GTAGGCAGTTTGTTGACCAATTTGAGCATTAAACATAAAAGAAAGAATGA TTATTAAATTTAGCAGAAGATCTAGGTTGATATCATATTTGTCTTGTTCA CAATGTCTAGACATTACTTTGAATTTTGATTTCGCACGCTACAATTTCTT CTTCCAGTTTGAGAGCTTTATATGGAACAGACAACCAACGAAATGCTGTC CATGGTAGTGATAGTCCTGATTCTGCGTTGAGGGAAATTCATTTCTTTTT CCCTAATGGTAAGAAGACACTTTTCACGTCTTTCCTTATACGTTATAGCC ATATATGAGCACCCAAGACATTTTCACCAAGCCCAACACACGCGCAATAC TAAACGATATGTTACGTCAAATCCGGGTACTTAAGTCTCATAAGATTAGA GATATTAAATCATCTAATGGTATGGCACACTTTATCATGACGTCAACCCT TTTCCGATCAACCAAACATCCCATGCTTTGATTCTGCTACACCTCATTTT TATTTGGATTTTCGGTCATCTTGATTAGCCTTAGAAACATAAACGTGCCT GTTTTTCTTGTCTTAACTTTTTCCCGAAAGGAAACTAATATAAAAATAGC AGCTCTCATCAAAATGAAACCTTTGATCCAACCGAACCACTCGACTTAAG GTGTTGAGGAATTTTTCATTTTGTTATCTCTTTTTTTTTTTGAAAATGAG CCAAAATTTCTCCTTTCATCGCCAACTTTAGTTTACGGTATCGAGTCAAT GCACTTGAACTCATCTTATAATGTTTAAACACGAGAAAAAACGTGTCATG TCTAACTGTAAGCCTTCGAAATTATATAAAAATGCAAAAGGCCCCGTTTG TCTTCTCCTGTTTCATCCTTCGATGCCAAGAATTTATATCTATATATCCA CTTTTTAAATACTTCTAGCTATCTTGGAGCCTTTACCAACGAGCACAGAA GCAAAAGATTACCTAACACGTGACGTCAATCCAACCTTATTGCAAGGACT CACTGAACTATGCAAAAGAAAACCTACTGACCCTTTGGTAATTATCTAAT CTGTAATAGTGTGTACTTCGTGTATGATGTAGCGACAATGAGTTTTGAAA TTTCCGGATTCTACGTCATAGAGAAGTAAGCTCTAATTTAGACGGCCCAC TTTTTGCCCTGCCTATTCTAATTGTGAATTAAGGTGAGCATAAAGTGGAC TGTTTAAAGTCAATGCCCTCTTTTGACGTCAATACAATGTCTTCTTTCAA TCTTTTTGAAGCAAAGAATTTAACCGCCCACTTTGTGCCCGCTTTGTGCC TACTCTTACAATTAGAATAGGCAGGGCGAAAGGTGAGCCGTCTAAACTAG AGCTAACAGAACAGTAACTTTTTTCGATCATGCGTACATTTTTTCCCTAT TCCTTAATTTTCGTGCTCATCCCATTTAACCTGTCCGAAAAATTCTCGCT TATTCGTTGAGAATGGAGAGTATGTTATTGTTGAAAGTAGGTTTTGAATT GTGGGCGTTTTTATCAATTCCATGGCAGACACTTTAGAAAAGTGACTTTG AGACGTCGGTTACCCTAAATCTTAAGATGTAAAAAAAAGTTTCCTTTGTC AAGGAGAAATGCTAATTTTTATGCAAACACGGGAAAATAGTAACGGTCGC ATAGAACGCTGTTATCAACTGTGCCATGCTTGATACGTTCTATTAATAAA GTATAGCTGTCCATTGTGGGCTCGAAATTTTGCGCAAGAAAACCTTTTGA GTGACCCGAATATTAAATTGAAAAGTGTAGTGACATGGTTTTCGGTTACC CAAAGTGTCCTAACTGATTCTAGCACGCAAACATAACTTTTTTATGTTCA TTTATTTTCAAAGAACTTTTTTCGTCAAAACTATGACATCATAACCAGAA GAAAAAATTGAATGTCTTCATCACTATTTTCTTCATAGCCACTCTTACTT GTTATACATCATTTTAGTGATAAACTATCATTGTGTCCGTTCTCCCAGTA GACAAACCAATGTTAAAATATCTGTTATGTAAGACAGGTTCCATTGTCCC TGTGGGAATTAATAAACAGTGTGTAACAAAATGAGAATGTATCGTCACTT CTATGGTCGANATTGTCCCTGTGGGAATTGATAAACAGTTTGTAAAAAAA TGAGAATGTATCGTCACTTCTATGGTCGAATGTTTTCATTTTGTCATCAT CGTACCCTCTTAATCCCTTCATTTCATAACTTCATGCACATTTTTTTTCT GCTTCCAGATCTGGTTGTCTGACTGGTTAGCAGAAAACAACCCCAACAAA CCAATCATCAGAGAACCAGGTGAAATTACAGAACCTTCTTCAGATTGAGG CTTTCGCTGAAAAACTTTTATTTTATTGTACATAACTGTTTGATTACTTT GGTGATTCGTGTAAATAAAAGACTGCTAAATTATGATCATTATTTGCTAA TTCTAATTCTTCTCTGAAATATCCATCTTGATATAATTCCATGTATTGAC CATTAGGAATCAGGACTGCTTGTGCTTAGATACAAATTGCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000666XLOC_000666Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001245-exon-sc0000007-1575043694:1232431..1232483TCONS_00001245-exon-sc0000007-1575043694:1232431..1232483Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1575043694:1217466..1217552TCONS_00001245-exon-sc0000007-1575043694:1217466..1217552Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1575043694:1217028..1217125TCONS_00001245-exon-sc0000007-1575043694:1217028..1217125Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1575043694:1216807..1216914TCONS_00001245-exon-sc0000007-1575043694:1216807..1216914Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1575043694:1215726..1215826TCONS_00001245-exon-sc0000007-1575043694:1215726..1215826Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1575043694:1214947..1215065TCONS_00001245-exon-sc0000007-1575043694:1214947..1215065Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1575043694:1213442..1213725TCONS_00001245-exon-sc0000007-1575043694:1213442..1213725Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1510915933:1232431..1232483TCONS_00001245-exon-sc0000007-1510915933:1232431..1232483Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1510915933:1217466..1217552TCONS_00001245-exon-sc0000007-1510915933:1217466..1217552Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1510915933:1217028..1217125TCONS_00001245-exon-sc0000007-1510915933:1217028..1217125Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1510915933:1216807..1216914TCONS_00001245-exon-sc0000007-1510915933:1216807..1216914Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1510915933:1215726..1215826TCONS_00001245-exon-sc0000007-1510915933:1215726..1215826Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1510915933:1214947..1215065TCONS_00001245-exon-sc0000007-1510915933:1214947..1215065Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1510915933:1213442..1213725TCONS_00001245-exon-sc0000007-1510915933:1213442..1213725Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1491911889:1232431..1232483TCONS_00001245-exon-sc0000007-1491911889:1232431..1232483Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1491911889:1217466..1217552TCONS_00001245-exon-sc0000007-1491911889:1217466..1217552Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1491911889:1217028..1217125TCONS_00001245-exon-sc0000007-1491911889:1217028..1217125Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1491911889:1216807..1216914TCONS_00001245-exon-sc0000007-1491911889:1216807..1216914Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1491911889:1215726..1215826TCONS_00001245-exon-sc0000007-1491911889:1215726..1215826Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1491911889:1214947..1215065TCONS_00001245-exon-sc0000007-1491911889:1214947..1215065Clytia hemisphaericaexon
TCONS_00001245-exon-sc0000007-1491911889:1213442..1213725TCONS_00001245-exon-sc0000007-1491911889:1213442..1213725Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:1213442..1232483 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.98343e-05 0 2.53483e-08 5.66115e-07 8.24271 11.5794 21.5589 7.18143 0.00238243 2.21403e-05 0.00123942 2.37066e-08 0.0176224 0.000247307 0 0 0 0 1.27726e-05 0 0 0 3.65497e-05 0 30.9907 34.872 0 3.36181 0 0
Blast
BLAST of TCONS_00001245 vs. Swiss-Prot (Human)
Match: NDK5 (Nucleoside diphosphate kinase homolog 5 OS=Homo sapiens GN=NME5 PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.880e-79
Identity = 112/197 (56.85%), Postives = 145/197 (73.60%), Query Frame = 3
Query:   54 TLAIIKPDAIENASEIEERVLNEGFTILQTRRVHLTPEQTSEFYVEHYGKMFFPSLVAFMSSGDILAMILARKNGIKHWRSVIGPTQTSKARDEAPDSLRALYGTDNQRNAVHGSDSPDSALREIHFFFPNAILEPLPTSTEAKDYLTRDVNPTLLQGLTELCKRKPTDPLIWLSDWLAENNPNKPIIREPGEITEP 644
            TLAIIKPD ++   EI++ +L  GFTI+Q R++ L+PEQ S FYVE YGKMFFP+L A+MSSG ++AMILAR   I +W  ++GP  +  A++  PDSLRA+YGTD+ RNA+HGS+   +A REI F FP  I+EP+P    AKDYL   + PTLL+GLTELCK+KP DPLIWL+DWL +NNPNKP +     + EP
Sbjct:   15 TLAIIKPDIVDKEEEIQDIILRSGFTIVQRRKLRLSPEQCSNFYVEKYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSLRAIYGTDDLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAAKDYLNLHIMPTLLEGLTELCKQKPADPLIWLADWLLKNNPNKPKLCHHPIVEEP 211          
The following BLAST results are available for this feature:
BLAST of TCONS_00001245 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NDK51.880e-7956.85Nucleoside diphosphate kinase homolog 5 OS=Homo sa... [more]
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