TCONS_00001272 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001272
Unique NameTCONS_00001272
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length160

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001272 ID=TCONS_00001272|Name=TCONS_00001272|organism=Clytia hemisphaerica|type=transcript|length=160bp
NNAGTTTGTAAATTGTCAAGTGACTTTCCTTTGAGTTCATGCTTTAACTT
GCTTCGAATTGGCAATTTGAGAGTGCTGTGCAATGTTCTTCCATTAATAT
Taagggtgcatgtcactagtccgacactttctagtccgacagtaaaatag
tccgaatctt
Run BLAST on NCBI

transcript from alignment at sc0000007:16289..16448

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001272 ID=TCONS_00001272|Name=TCONS_00001272|organism=Clytia hemisphaerica|type=transcript|length=160bp|location=Sequence derived from alignment at sc0000007:16289..16448 (Clytia hemisphaerica)
aagattcggactattttactgtcggactagaaagtgtcggactagtgaca
tgcacccttAATATTAATGGAAGAACATTGCACAGCACTCTCAAATTGCC
AATTCGAAGCAAGTTAAAGCATGAACTCAAAGGAAAGTCACTTGACAATT
TACAAACTNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000676XLOC_000676Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001272-exon-sc0000007-1491911889:16289..16448TCONS_00001272-exon-sc0000007-1491911889:16289..16448Clytia hemisphaericaexon
TCONS_00001272-exon-sc0000007-1510915933:16289..16448TCONS_00001272-exon-sc0000007-1510915933:16289..16448Clytia hemisphaericaexon
TCONS_00001272-exon-sc0000007-1575043694:16289..16448TCONS_00001272-exon-sc0000007-1575043694:16289..16448Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:16289..16448 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001272 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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