TCONS_00001330 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001330
Unique NameTCONS_00001330
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2716

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001330 ID=TCONS_00001330|Name=TCONS_00001330|organism=Clytia hemisphaerica|type=transcript|length=2716bp
AGTGTTTATACGCTTGATGATTGAAATctatgtttaaagattttttactg
ctgaaagtttaaaaaggaagtTTTTTAGGGAAGGctgtttaaggcttttt
gaggattttttaaaaaggtttttggGGATTTTGGAAACAAGCCTTAGAAT
TATTCAAAAATGTATGAAGCCTTCCCTATGtcgCAAGACGATCAAGATGA
TATATATGATACACCAGAAACTGAAGAAATAGCTCGCCCACCACCTCTGC
AACAGAAACCACAACGTCCAGGAGGGTACGCACGACAACCACAACACCAA
ACTCCAATACCACAACACCAATCTCCAATACCACAACACCAATCTCCAAT
ACCACAACACCAATCTCCAGCAGCACACCAAGATAACTTCAATATGAGCA
ATAAACGCACACAAAACATTGATAAGCATCGTCAACAATCGTTCGCTAAT
AGTCGAGCAATGTTCGAACAGAGATCAACTTCACCTCCACAACCAGCTAT
CAATCGATCAGCTAAACCACCTGTACAACAACGTCGAAGTGATTCTAACA
ATAACCCGCCCTTCGCTCCCAAACCCAATATTTCTAAGCGCCCAACGATT
CCAACGCCAGCAGCGCAACAAAGGGTGGTACCGCCCCAACCGATCCAACT
TCAAGAACCTCAACATTATGAAATGGATAACCAAAGCGAAGACTCGGGCT
GCCATGAGGACTTTTACATTGAGCCGCATCAAGCCAAAAATGCCGTCATA
CCCCACGAAGAAGAAACGTATGAGGTCACAGACGGGCCAACCTCCCCGGT
CGAAATCATATCCTCAAAACCTAAAGGCATGCCTGGTCAGCAATTCATTA
CACAACTAAATCGAATGACCTTAGAAAGATCTGCTCCCTCACTTCCCGCC
TCACAGAGCAAACCAATGGCTGGAAGACCTCTCGTACCGACCCCAGATCA
AGAAGAAACTTATGAAATCGCACCTGAGAACCCTCGTTCACCACCATTAC
CCGGTAACCACCCTTCAGCCGCAAAAAGCCCCGGCATCCCATCTCGACCT
TTCGTTCAGAGCCGGCCACCAATGCCAGTACCATCACCACCACCACAGGA
AGAAGAAACCTATGAAGTGACGCCCGATCAAGCGCCCGCTTTACCACCCT
CACATCCTTCCTCGAGAAAATCTTCAAGTACTTCGTCTATAGGGGAATCA
CCGAGAACGTCCATTAAAGACAGATTACCAAATCCTCGAGATAACATACA
AGAAGATTATGAGATGATAACTCATAGCCAAAGACCGCCTCCTCAACTTC
CTATCTCTTCACGTCCATCTCCACCCCAACAAAGGCGCCCACCACCCTCG
TTAGAACCAAAAGcgCGCAACGAGAAACCGCAACGCCTTTTACCCTCGCC
TTCGCAAGAAATCAACATTCCACCCAGAACGCCAAAAATGTCACAACCAC
AAAACTCGATGCCTCCAAAGCTTATGGGAAGGCCAAGCCACCCAGCTTTC
CAACAAGCAACGATGAGTTTAGATCGAAGCAAGGATACTTGTCCTCAACC
TACCATAGAACGTATACCATCGTACAAAAAGCAAACACAATCTGCAAATG
CACCAACGCCTATCAATAGACAAACGCCTGCTCCCGCCCATCCGTTATCT
GGTTTCACCTGGTTCCAACCGGAGCTTGATCGTAGAGCGTGCgaaattaa
attgaaccaaaacagaAGGgATGGTGACTTTGTGATACGAAACTCATCCA
AAGCCGGTGTCCCATTTTCTATATCAATCTTTCACGATAATGTTGTCCGC
AATTTACAGCTGCTTCAAAAAGACGGTAAAATGTACTTGGGAAGTTCTAC
TGAGGGGTTTGAAGGAGTACCTGAATTGGTATCGTATCATCAGAATAACG
AAATCATACTCAACACTGGTGGTAAAGTGAAACTACTCAGGATTTGATGG
CAATAGAAAATTTAGTACGCATTTATAAGgaagaaaaacgaaaatatttt
tgggtaaTGTCAGAATGGGTGAATCCAACCAAAGCTTTGTTGGAGCTTTT
AAATTCAAGAATTCGGAAGAGAATTCGCCTTGTGGACTTTAAAGAGCTAT
TTATAAGTTCATTCAATTGCAACCGAAAATATGGGATCAACATTGATCAC
CATCATTGTTTTGGATCATTGCTTTTTTATTAACGGAGCTTCAAGATTAA
TCTCCCGCCGCCTTACTAATAGATCTTATTGGAGTTCGGGGGTattaaaa
tagaaatctcttaggaattcctcgggggaattctattgtaatactcccga
aacaattccacaatgcatcgcttttttagaaaaatcaaaaacttcgaTAA
GATCTATTTACATGGTCTCCGAAAAAGTCAGAACACTTACAGATatagaa
gaaaaaaagtattttttatgGGATATCTATGAAAGACACTTCGGAAAGGC
CGATTTAAACAATCACAAAGACAAACTTGGTGATAGAAAATGTTTCATAT
TGAACCAGAGTTGTTTTTGGTGATACTTAGTTAATTTCTTGTTGCTTTTT
agtttagatttttttgttatgtaaatacgaatttgattatttttctaaat
aattaTTGATAGATGAATAGGTTTTCTAATGGCggataattcttttttta
aatatttgtaATTATTGGTAActtaaatttacagaaaaatatttttttca
aatgtttataTTAAAA
Run BLAST on NCBI

transcript from alignment at sc0000010:142677..155140+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001330 ID=TCONS_00001330|Name=TCONS_00001330|organism=Clytia hemisphaerica|type=transcript|length=12464bp|location=Sequence derived from alignment at sc0000010:142677..155140+ (Clytia hemisphaerica)
AGTGTTTATACGCTTGATGATTGAAATctatgtttaaagattttttactg
ctgaaagtttaaaaaggaagtTTTTTAGGGAAGGctgtttaaggcttttt
gaggattttttaaaaaggtttttggGGATTTTGGAAACAAGCCTTAGAAT
TATTCAAAAATGTATGAAGCCTTCCCTATGGTAAGTGATATTTTGCTTTG
AATTCTTGAAATTATAATCTTAAATCTCTTTTTAGCAGGGGGGGTGTCGG
TACTAAAACccaagacatatatgagtactacaaggttttttgacgatttt
tgacataccctcacctaatttttgaaaaaggaattttagtacacatgtac
tgaaatttatttttacattttagcaTAGTGACCACCTAAATAAGGCTTAT
TTTGGAATTCGGTTCGAAGAATGTGGGTCTttggactttcaacaaaatgc
cAACTCTGGTTATTTAAGCTGTCAATGAACCTGATATATCTCTATCTATT
CTAGATAAAGACTCAGAAACAGTCAAGACACTTTTGCCCTGCTCTACTTT
AGTTATTGCAAAGATTGATGGGTTATTTTTCACCTCTAATTTACAGAgga
acctttttcctcagttgagataaaaatttcctattgaaatattaatgggg
atacaaattctattgttccaaggttaaaaacccagtggggatatgatttt
ggagtgcaatttttacacatggaattttgagtggggatgaaatcaaagtc
aatttcccagtagggctgaaattcaagggtattctaccaccggggacaaa
atttttgcttaatttgtgacacagggacgtatttaaatcttatatagaga
gtttttattttttcattttgcctaaaatgctcAGTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtagttaaatttcctaaaat
ttggtgatttttagtactcatgtattaaaatttttcttaaatttcttgaa
gacccccacctaatttgggattttagtacacatggtactaaaatgctttt
aggctttttttgtaataccaccacgtcactaaaagtcatgatgtctgaaa
ttttagtaccgacccccccccctctttttaGCTAAATTTATAGTTTTTCA
CACAAAGACtataagctctagtttagacggccgactttctgccctgtcta
ttctaattgttagagtaggcagaagtTGGGCAAAAAGTTGGCAGctaaag
acattgcattgacgtcaaaagagggcgatgcattgactttagacggccca
ctttatgcccactttgattcacaattagaatagacagggcaaaaagtggg
ctgtctaaactagagctaagctCGTCTGAAAGGGTAAAAGAAAATTGTCA
ATACTTTGTATGTATTGTCAGTACCTGGTAACTTTCAGTTTCGGAAATTT
TCAATGTCATTATTAAGTATTCTACTCATTTTATCTTGAATTTGGTCACA
ACTTTCATTTAGTATTGGCGTCATAAATGAGGTATTATTTCCTTGAAAGT
TTGTGAGAGATCTATGGGCCTGTGTCAAAAAATGTTGCCTTTGAAGTAGG
TTTAAAGCATTTTGTACATTTACGACGAATCTTTGTTAAAAAACAATAGG
ccgcaaaattaaacaccttttttgacaacaaataatatgcccataacttt
tgatctagagaagttgggattTTGAtgcaatacacttttttgctcagttt
gaagagttCTTACGTAGTATAGGTcttctttgattttgaagacccccaaa
aatcatgaattttctgacctttcaattttgtttggaaacgcaaaaaatcg
aaaattatgcAAAAACTGCAGTTTTTCAAggttggtaacattcaaattcc
gaatcagcaccctcaaattgaccaaaatcaatCATGAaaggacattttga
aaaaaagtgaaacgttttggtGGCACTGCACTGGCCTACAAGTTTCCATT
TCAATAGAGGGAAAGGTAATGATGTTTATCTCTAAGCAATTATAAATGAA
CGATCTTAAAGCAGTAAATTGCTTTTATAAATGGTTTTGAAATTAGCTAA
CCGCGTCTTCTGAAATGATTTCTATTAACTTAAATTAAGTTTTGGCTCCT
ATGTCATATGATACGTTTCGTTTAAAAGAACATAGGCGGACAGTTTTATC
ATGAAATTTAAATTGATAGAGATATTGTTAAGTAATCTGGTCTATTGAAA
ACAACTTTTTAGCGTTCATTATCTGTAGAAAATAGATTGTAATCAAAGTC
ACAGCTTaggttgtctgtacacagacccgatatctacggctaatttcaaa
aattcatttccgtagacaaacgtgagatacactctggtacagagtacagC
TTAGGGATCTGGATATTACTTTTGCTTTTTGCGTTTTGTTCCTATTTCGA
ATTTAATCAGGTATAGATATTCTGTGATTGAAATATCTCAATTCTGCCCA
ATTTAGTAACTATTACTGCTACTTTAATCATATAGCTTTCGTGcttaata
tttttggaaaatagtttTGGAAGCCCTAGCGAATTTATTGTATTGTGTTA
GCATCTTGAAGACATGGTTTTATGGGATTTGATTGTCTCAATTCTGCTAT
AATTTAGTAAAAAATTTACTTCAATATACTTCACTCGTATAGCTTTTGTG
CTCAATGTTTTATGtaggaatacacgtttttttataagaacaaactatat
aagaacataaggcttcactggccaaaatgttaagagcaagttaagaacat
tttaaggctttgtggactcaaaaccacccaatttcttaggaaaatagtca
aaattattcacaaaatggtcaaaataagaacatgttcagaacaattttag
gcttaaaactcaaaaagttcagaacattcaaggcttcaaaaaatttggat
gtttttataaaaaaaacgcgtAGTCCTGGTAACCCTAGCAAATTTACTTG
TATTTTCTCAATATCTTTACTttccttttctttatttttcatttatcaca
tttttttttcagtcgCAAGACGATCAAGATGATATATATGATACACCAGA
AACTGAAGAAATAGGTTGGTGTATTTGTATTTAAAGTTCTTGACTAGCAT
AATTGAATGTCCAAGTTATTTTGTGACCAGCCAAAAGTATAGTTTTttat
tctgtttgttttttttatacaaGTTCGTCAAAATTAGACGATATGTGGCG
ACTAGGACAGAAATAATTTGATATTGAACGAAAACAACTATGATGATCAG
TTAATcatggaaaaattttaaaccccaGATCAAAATATTATTCAGGAATA
TTATTACAGTCTTGGTCAACTTAATGTATACACCGAATGTCAAAGTTTGA
AACAGTCCATTTTTCATACTTTCGATTCAACTTTTACAGCTCGCCCACCA
CCTCTGCAACAGAAACCACAACGTCCAGGAGGGTACGCACGACAACCACA
ACACCAAACTCCAATACCACAACACCAATCTCCAATACCACAACACCAAT
CTCCAATACCACAACACCAATCTCCAGCAGCACACCAAGATAACTTCAAT
ATGAGCAATAAACGCACACAAAACATTGATAAGCATCGTCAACAATCGTT
CGCTAATAGTCGAGCAATGTTCGAACAGAGATCAACTTCACCTCCACAAC
CAGCTATCAATCGATCAGCTAAACCACCTGTACAACAACGTCGAAGTGAT
TCTAACAATAACCCGCCCTTCGCTCCCAAACCCAATATTTCTAAGCGCCC
AACGATTCCAACGCCAGCAGCGCAACAAAGGGTGGTACCGCCCCAACCGA
TCCAACTTCAAGAACCTCAACATTATGAAATGGATAACCAAAGCGAAGAC
TCGGGCTGCCATGAGGACTTTTACATTGAGCCGCATCAAGCCAAAAATGC
CGTCATACCCCACGAAGAAGAAACGTATGAGGTCACAGACGGGCCAACCT
CCCCGGTCGAAATCATATCCTCAAAACCTAAAGGCATGCCTGGTCAGCAA
TTCATTACACAACTAAATCGAATGACCTTAGAAAGATCTGCTCCCTCACT
TCCCGCCTCACAGAGCAAACCAATGGCTGGAAGACCTCTCGTACCGACCC
CAGATCAAGAAGAAACTTATGAAATCGCACCTGAGAACCCTCGTTCACCA
CCATTACCCGGTAACCACCCTTCAGCCGCAAAAAGCCCCGGCATCCCATC
TCGACCTTTCGTTCAGAGCCGGCCACCAATGCCAGTACCATCACCACCAC
CACAGGAAGAAGAAACCTATGAAGTGACGCCCGATCAAGCGCCCGCTTTA
CCACCCTCACATCCTTCCTCGAGAAAATCTTCAAGTACTTCGTCTATAGG
TaagtaaaagagaaaaaaatttgccaGCCTGGTGATCTTTCTGGTTACTG
TGAACATCACAGTTTGGTTTTTTCTGAAATTNAATTTGCCAACCTGGTGA
TCTTTCTGGTTACTGTGAACATCACAGTTtggttttttctgaaatttaac
CTTGTGAGGACGGACAATTTTATCGCGTATGTCTCATCACATTTCTGATC
ATATAATGGAGAGCACGTATCCTCGTGTTATGTTCTAGCAGGTTACATCT
TTATATATGTGAAAAAGTAAGAATTTCTCTCcgactatattcactcagga
gatttgggtggcagagcagcatatgcatttcgtccttattgaGACTCATC
CATCAGATATATATCTATCAGTGAATTGAGTTTCCTTCAAAAGAACTCCT
ATCTTGTGATTTGATTGATTAAGCCTTCATCAAAAATATCCTGGATAATA
ATTGTGGCGTGCAACTTAGTGTCCGGTATCACAGCCTGCAGTTTCATTTC
TCGTCTAATTTGGaactagcctagttaactaagcctgtattcacaaggct
aggataCACCGCTAATGGCAATATAGcattttcggcgctttaaagatttt
ttatatttacggattttatgtttgccttggaatactggtAATTCAGTTAC
AagttaccatcagatttatcctagtgactgaatcaaaccaGTTTAGATTT
CTAGGCTTATTTGGAGCTAGGTGGTAATAATATCTAAGCAGGTCATAAAC
TATTCGATTCATTCTACCATCATCTATCTTCTAATACCTACAGGGGAATC
ACCGAGAACGTCCATTAAAGACAGATTACCAAATCCTCGAGATAACATAC
AAGAAGATTATGAGATGATAACTCATAGCCAAAGACCGCCTCCTCAACTT
CCTATCTCTTCACGTCCATCTCCACCCCAACAAAGGCGCCCACCACCCTC
GTTAGAACCAAAAGGTAATGATCATTCTTCTCgttgaatttctttttgta
cTTGCAGGTGTGTAGCAACTTATTCACATTCTTTACCAAGTAGGATGTTT
AGGACATTCATTATATTCCAGATTTTTCCacgaaaaagttgattttgtat
tggaaatccaggagttacaaaaaacattttacctTAGAAATCCGCtatcg
tccaccccctgtatgctGTTTCTCAACAGCATTTCttcaactcaaaattt
cagaaaaaaaacttttatccaCTGACATTggaattatttttctaaaattt
aaagtGAATTTTCGTGAGGGGTATTGAAACTCTAGAAACTATGATCATTA
ATATTTTGGGGAATGAAAAATAGGATTCTGTTGATATGTTGATTCTTTGT
ATACAAAGAGAAAACACAAGTTGACATGCATGATAtcgttaatatttttt
tgttgctttttaagGTCAAGAACCTGTATTACCTCGTAAgcataaatatt
tatatttcattattttgtaaGCTAAGTCGAGTCTTCATGGTCCCTTACtt
ataaagattttgttttaaaaaaaaactacgaACGAGGGGGGGggatttaa
aactttctgatagTTGGTCTTTTATTTTAGCTAGAAAACTTGAGCTTTTG
GAAGCCGAAGATAGTGATCTGATGACCCCTGATGCTGTATTGTGCTCCAA
AGAACTTAATATTTCCTTTTCAGCCaaacatattttcaatatatccttca
aaatatttttcatttcagcgCGCAACGAGAAACCGCAACGCCTTTTACCC
TCGCCTTCGCAAGAAATCAACATTCCACCCAGAACGCCAAAAAGTAAGTC
AACTCGTTATATGCACCATAGCAATGTCTTTCACGGACCCaacatctgat
tggttgaaattgacgtattgactgaatttaccaatcagctattggttccg
tgatgtaatatcagaagacattgcaatggtgcatgtAATGAATAGGGTGT
GTTTATAATTGATTGGTATTTTAAAGACAGGGATATCAATACGCTAACGA
AGTTTTTTCTCTGTTGCCATCTTCTGCTCGAGAGAAAGATTCAAAGAAAT
TGTGTTTTATCTTTGAGACTTTCTGATCTGAAGGTACCAAACTTCACACT
ACTGATTGTATTATATGCTGCAATTAAAACCATTGTATAACAAAAACCCT
CGACACAAGATTACCTACGAACCAGATTTTGCCAATTCTTTGGGGCGCAC
ATGGTttatacccagctggcacacaacgttgtttcaacgttcatctaacg
ttatatggacgctgtgaacgttagataaacgtcgaaaaaacgttatgtgc
cagctggatAGTAAATACTCTTGAATGATAAGTGAGGGTAATAAATTGTT
GGCAATAGATAAATTGGAACATCATGTCTTGTTTCTTTTTCCATACAGTG
TCACAACCACAAAACTCGATGCCTCCAAAGCTTATGGGAAGGTAAGCAAA
ATACTGGGTTTTTGAAACTTTGCGTTTGTTCATGGTTCCTTTAGGTACGA
CATTTACATAGTTCAGGTGGAAAGCTTTCACGTAACTTTTCGCGAGGttg
aaaattcgcgaaaattattAAATAAGTTTTCGTAAAATAAAAGGAGTATG
GAAGTCTCTAAGCCATAACGACGTATAATTTGCTGAGATCACCatgtttg
aatgaaaaagactttgtagtattattttttgaaaaatacggAGTTAAAAG
ACAGACCATGtcgtgattttctaaaaaagataatTTGTATGTCTTAAACG
TAAAACTTTTGAGATAGATGATGAGTGGCCTAAATAATTATTGTCACGAA
GTAGAGCCTTTGCTGAGTACTTTTTCTGTCTCGTTTTTGATGCTCTAAGG
ATGGTTACTTCCTCGACTTAATGACTATTACTGGGACTTAAACGTCCTTA
GAGATTTTGGAAATTTGGTCTATCAGAATGTTCCTCGTTCTTTTTTACCC
TAATTGAGTCCGGCTGTCCGGTGCGTTTTCTTTTTAATCGTTTTctttca
ctgacctttatatatccctggaccaagttactcaagcaaaatattatgat
cggagtttttttgaaattggtacccgtgGAGAGGGCGCTAGATCTAGTTT
TGCTTGTACATTAATGATGTATCATCGTTTGTCGTAAGGCAAAGTctcaa
acactacaatggcttctttgagggtaccaactttcaaaaacttcgatcaa
aggtGGCGGATATTGCTTGGttcagggatatataaaggtcagtgttttCT
ATACAAAAAAATGTAAGGTATCATTTTTATGCAATGAGATCTGCAATATC
CATCTGTGTCTCTTACCCCCGTGACTTACTACCATTGCAGTCTACCTACA
TTCAGTCTAAGCAACAGCTGGCTCGAAGATGTCAAGTGCGGACAAAGGAA
AACCAGCCTCGATATGGGTGCCATAAGTCCGAAATTATTTCGTCGTATAA
ATGACCGTCGTTCAAGCTTATCTGCCGATGAAATTCAAGTCAATCACTCA
ACTGCATGTGTCTTAGGGTAGGATGATATGATAAATCAACATtgactaaa
aaagaaaacatgacaCACAAAGAGACATGGCGTGACAGTTGAGTTCCGGA
CAAATATAATAGGCTTACTGTAATCCGTTTCCAGTACAGTGTGTCCCGAA
TAAAGTTATCAAGAAAATCTTGGCAAAATCAATCAACTCGTTGGCATATT
ACCGGGTGTGTCAGAAATAAGTTACcctttttgatttgatattgtaggcT
TTTCGCCTTTTCTgacaatttttaaaattgacattttaggtttttaaaca
taacttttgaacccatgaagtaaaattaaaaagtaatacaccaaatttta
agttaggctttcctctgtATGATtcagaaacttttgaaaaacctCTCAAC
TACTGACaacaatattaaattaaaaaaggATAACTAATTTCTGGAACACC
CGGTAGTTTAAAAAGATATTTCGATTCATTCCTAGAACAAACAACTAAAT
ACAAGCCAGTTGTAAATCGTTAACCCTCATACTGTGATGGAGGATTTTTC
ATATACTAAAAACTGACCTCTTGATTCGGGACATGCTGTAAATTGCATGT
TAACATGGAAATAACTGAACAATCAATGTTCATCAAGGATGTGAGACTTT
CAATAATGTTGAAACTGGTGACGGactaaaattctgaaaataaaatgcaa
aaaaaaaaaatacattagTTTACNAGACTAaaattctgaagaaaaaaaat
gcaaaaaaaaaaatacattagTTTACTTTCGACGAGTAGATTTGCTTCTT
TACTTGTTCGTGAAaataaatttcgcgaaattgaatgaaatggaaatttt
taaagttttgttttcGACGTTTTGTAACTCCGAACGTTTTAGTTTTGGCG
AAAGCTTGACAtcttttggaccattttcagttgatttaaGGCCTTCTAGG
AAAATACATCAACGCGAAACGTTTCAAAATATTGACTTAATAATGGAAAT
AAATCGAGAAATTTGTCTCGCAGAATTGAACCTtgtgaaaattaatccaa
ttaaagcaCACTGACAAAGAACAGTTTAAACAATGAAATATTGATGATTT
TGACGAACATTACCTTAACATAACCAATGACATACGAAATATCGActtta
caaaatagaaatactTAACCACTCATACGCGTACAAAGTTATTCTAAATG
AGACCTTCAATCTGTTACTTTTTTATGGAATTGTTCATTTAATATTTTAG
CAAATTAATTATCAGACATTTTCTAGATACAGTTTTCCTTCCTTTTTGAA
ACAGGCCAAGCCACCCAGCTTTCCAACAAGCAACGATGAGTTTAGATCGA
AGCAAGGATACTTGTCCTCAACCTACCATAGAACGTATACCATCGTACAA
AAAGCAAACACAATCTGCAAATGCACCAACGCCTATCAATAGACAAACGC
CTGCTCCCGCCCATCCGTTATCTGGTTTCACCTGGTTCCAACCGGAGCTT
GATCGTAGAGCGTGCgaaattaaattgaaccaaaacagaAGGGTGAGTAC
GTCTACGTTTAGGATACTGTTCGCCCCTTGAGGTACTCTGCACCAGaatg
tatctcacgtttatcgcttcgtagtacactctgtgcgcattgtctgtttg
ataaaaaaattcccgtatggagacctctgcgatgaagtatgatttatata
aatagcaacacttctctcgtcttctccccctctctcaccaacactccatc
gcagcggtcggtttgaaaaatctcaaatgagaaaaggcaatgacaacaga
ccctctacggcaatgaattttgaaattagtcgtagatactgggtctgtgt
acaggcAAACTTTGAGGGAGTCAAAGGTTATTTCTCTCTGCTACTCGAGA
TGTTCAATGGCTCGAACGATCACTGTCTACTTCTTGGTGTTTAAAGTTAT
TGTGACTTAAAAGTATTCCTAAAAGAAGCAAGGTGATTTTCCCCTGAATA
AACCTTGACTAAAATTGGAAATTATGTTCATTTGAAACTCATATGAATCC
TTTTGTGTTTGTTATTTCGTAGTATTTTCAAGTCAATCTCGTTGAATTGC
CTGAAGGCTGCAAtacaacgctttttttataataatacactttataagaa
tgtccatgataaaaatggccaaaaaattaaggataatgctaagaatatca
ccatcatggaattttgctactcagctaagaatgacatttttagagcattt
tcaattataaattgccaattacccccaagtaaggctcactcctttcacaa
aaatgccattttatgcttgagacgtatgtactaaatgtcaaatctagtct
gaattaggattctaacctaagaataatgtaagaatattttaggatgattt
ttttaagaaaatccatgataaaatggatttacaccattcttatgaaAATA
AGCGTGTATTTGAAGCACACATTTCAAGGTTTTCTAAAatcttttcttta
ctttttaggATGGTGACTTTGTGATACGAAACTCATCCAAAGCCGGTGTC
CCATTTTCTATATCAATCTTTCACGATAATGTTGTCCGCAATTTACAGTA
AGTGTCCGAAAAAGTTTAACAATCGCTATTAAATGCTTTTCATTGATGTT
AGGTGTATAATATTTTCTCAATGCAGAATTTCCTaatctaccttatcggg
gaaaaaaatgtcggagttttatttaaaaaagatcttgtaaatcgacgttt
aaagcacttatttcggttaataaagatgtaaaaaatatagattttaattt
tggttggggtttaaagaattgggtaaaagttttggtcgggtgataaaata
tcggggaaaaaattcgtagggggaaaatttcgtcaccccttcaaaatttt
cgtcacttccCCCCGACATTTTTCCCAGATAAGGTATAGCAACGTAGGCA
GAAATTTTCAAgatcaaaaattgaagaaaaagatttcgcgatttctttaa
aaacaataatTCTAAAGAGCAAAACtttatggaaaaaaatataaaaggtA
GAAATGTGTCCGTCCATATATTCTGTGAATTTTCTTACTTGATAGAAACT
AGCCAAAATAggccaaaattacaaaattatctGCCTAAAAAGTATTGAAC
ACAAACCGAAGATTAATTCTTTTCCATTTATAGGCTGCTTCAAAAAGACG
GTAAAATGTACTTGGGAAGTTCTACTGAGGTAGGTCATTCATTAAACACT
TATACATACTCGAAGTGACCGGGAAGGGACTCGGTGTCATCCTCCAAATA
ATGTTATATGCTATGTCATGCATGGTAACACGCTCCATATTGAGTAATAT
TAGCCATAAACTCtctggtacctaatagccgggggggggaggaggttgga
aaaaatctcaaaacttaataagcggggcgttagaataaaaatgtcctagg
tggaaaattttcgaaaaattaattagtgggggggcggctattaggtaccc
gagagtaagccTTAATACAATCACAGTAGAATTTTCTTCTGCCTAAAACA
GATTTTCACCTCTTAAAAACCATTTATTTATCAGTCATATTTTTGATCAG
CTAAGATGGATTAATGAGTTTCTCAATAACTTTTTATTCTGCTATCTTTC
AGGGGTTTGAAGGAGTACCTGAATTGGTATCGTATCATCAGAATAACGAA
ATCATACTCAACACTGGTGGTAAAGTGAAACTACTCAGGATTTGATGGCA
ATAGAAAATTTAGTACGCATTTATAAGgaagaaaaacgaaaatatttttg
ggtaaTGTCAGAATGGGTGAATCCAACCAAAGCTTTGTTGGAGCTTTTAA
ATTCAAGAATTCGGAAGAGAATTCGCCTTGTGGACTTTAAAGAGCTATTT
ATAAGTTCATTCAATTGCAACCGAAAATATGGGATCAACATTGATCACCA
TCATTGTTTTGGATCATTGCTTTTTTATTAACGGAGCTTCAAGATTAATC
TCCCGCCGCCTTACTAATAGATCTTATTGGAGTTCGGGGGTattaaaata
gaaatctcttaggaattcctcgggggaattctattgtaatactcccgaaa
caattccacaatgcatcgcttttttagaaaaatcaaaaacttcgaTAAGA
TCTATTTACATGGTCTCCGAAAAAGTCAGAACACTTACAGATatagaaga
aaaaaagtattttttatgGGATATCTATGAAAGACACTTCGGAAAGGCCG
ATTTAAACAATCACAAAGACAAACTTGGTGATAGAAAATGTTTCATATTG
AACCAGAGTTGTTTTTGGTGATACTTAGTTAATTTCTTGTTGCTTTTTag
tttagatttttttgttatgtaaatacgaatttgattatttttctaaataa
ttaTTGATAGATGAATAGGTTTTCTAATGGCggataattctttttttaaa
tatttgtaATTATTGGTAActtaaatttacagaaaaatatttttttcaaa
tgtttataTTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000718XLOC_000718Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001330-exon-sc0000010-1491911889:142677..142856TCONS_00001330-exon-sc0000010-1491911889:142677..142856Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:142677..142856TCONS_00001330-exon-sc0000010-1510915933:142677..142856Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:142677..142856TCONS_00001330-exon-sc0000010-1575043694:142677..142856Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1491911889:145789..145840TCONS_00001330-exon-sc0000010-1491911889:145789..145840Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:145789..145840TCONS_00001330-exon-sc0000010-1510915933:145789..145840Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:145789..145840TCONS_00001330-exon-sc0000010-1575043694:145789..145840Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1491911889:146166..147125TCONS_00001330-exon-sc0000010-1491911889:146166..147125Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:146166..147125TCONS_00001330-exon-sc0000010-1510915933:146166..147125Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:146166..147125TCONS_00001330-exon-sc0000010-1575043694:146166..147125Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1491911889:147920..148090TCONS_00001330-exon-sc0000010-1491911889:147920..148090Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:147920..148090TCONS_00001330-exon-sc0000010-1510915933:147920..148090Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:147920..148090TCONS_00001330-exon-sc0000010-1575043694:147920..148090Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1491911889:148845..148919TCONS_00001330-exon-sc0000010-1491911889:148845..148919Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:148845..148919TCONS_00001330-exon-sc0000010-1510915933:148845..148919Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:148845..148919TCONS_00001330-exon-sc0000010-1575043694:148845..148919Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1491911889:149525..149567TCONS_00001330-exon-sc0000010-1491911889:149525..149567Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:149525..149567TCONS_00001330-exon-sc0000010-1510915933:149525..149567Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:149525..149567TCONS_00001330-exon-sc0000010-1575043694:149525..149567Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1491911889:151931..152168TCONS_00001330-exon-sc0000010-1491911889:151931..152168Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:151931..152168TCONS_00001330-exon-sc0000010-1510915933:151931..152168Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:151931..152168TCONS_00001330-exon-sc0000010-1575043694:151931..152168Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1491911889:153135..153223TCONS_00001330-exon-sc0000010-1491911889:153135..153223Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:153135..153223TCONS_00001330-exon-sc0000010-1510915933:153135..153223Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:153135..153223TCONS_00001330-exon-sc0000010-1575043694:153135..153223Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1491911889:153810..153855TCONS_00001330-exon-sc0000010-1491911889:153810..153855Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:153810..153855TCONS_00001330-exon-sc0000010-1510915933:153810..153855Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:153810..153855TCONS_00001330-exon-sc0000010-1575043694:153810..153855Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1491911889:154279..155140TCONS_00001330-exon-sc0000010-1491911889:154279..155140Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:154279..155140TCONS_00001330-exon-sc0000010-1510915933:154279..155140Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:154279..155140TCONS_00001330-exon-sc0000010-1575043694:154279..155140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:142677..155140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.45119	0	0	0	0.162602	1.81428e-05	0	1.22055	1.13352e-06	1.26513	6.10804e-07	0.000197351	5.1476e-07	1.99248e-09	8.29394e-05	0.000530223	0.288574	0.679563	3.11965e-06	0.0505611	3.54271e-06	2.00243e-09	0.0773698	2.26518e-05	0	0	0.00175131	0.00567991	4.78648e-05	0.00800562
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001330 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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