|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001412 ID=TCONS_00001412|Name=TCONS_00001412|organism=Clytia hemisphaerica|type=transcript|length=100bp
GAAAGTGTTCACATTTTGACTGTATGTTCTTGGTGGTGGCTGAAGCGGTG
GCGAGCCTTCACAAAATCCTGCATCAGCATTTTCGTAATCTTCGTCGTCA Run BLAST on NCBI transcript from alignment at sc0000010:139247..140795- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001412 ID=TCONS_00001412|Name=TCONS_00001412|organism=Clytia hemisphaerica|type=transcript|length=1549bp|location=Sequence derived from alignment at sc0000010:139247..140795- (Clytia hemisphaerica)
GAAAGTGTTCACATTTTGACTGTATGTTCTTGGTGGTGGCTGAAGCGGTG
GCTGAAGAGGTGGCGAGCCTAAAAATTAATCAAGAGAAAAATTTTAGATT
GCGCAACAAAATTAACACAGTAAATTTAACACAGGTTATCTTCTGTACAC
AACTTGACAAAAAAGATTAACCTTACAGCAACAGTCCCATAAATATGATT
ACCAAAGTTTCTAATTGCTATCATATTTATCGTTCCTCTCTTCTTTCTAA
AAATTCGTAAACATTTACAAGAAGCTGAGAGAAATACAGTTACTACAATT
GAAAGTTCATTTCGAAAAACCATTGTATCAAATGGTCAGTCAAAATAGAG
CAATTATGGAGTGATGGCTAAGTGGTCAAAGGCGTCAGCGTCTCGAACCA
GGGATTCGCGATTCGGATCCCCGCTCCTTCTAATGTTCCGTACAATTCAT
TCTAATCTTTAAGGAATAAATAGTCGAGCCGTGAAATAGTGAATCTCTAG
AGTACGATACTTTGACATATATAATACTCGATTGTTACTACCTTCACAAA
ATCCTGCATCAGCATTTTCGTAATCTTCGTCGTCAAACTGTAAAAAAAAG
AGGGAAAATATGGAGGGTCGGTCACGTATTCAAGTTACGAATTTCCGTAA
ATATCCTCANGGGGGGGGGGCTCTATGAAGTTATACACTAGGCTCGATCA
ATGTAGACACTCAAGAAAACCAAGTCAAAGTCCAACATCTTTTTCACATT
GAACAGGACTTTTTAGTATAAGCAGAGGAAGGGTTTTAAGGGTTACCCAA
TACCTAAATGCAATTATCACCAAAGAAATAGTAAGCGAACAAAATTATGT
TCGGGCATACAAAATATAAGTTCACGTGTAAAAAGTCGTACAAAAACTGT
TGACAAAATAACCTACCAGATAGTTGTATGATTTGGATTCATCTATGCTA
TCATTACTATTGTTGAAAGTGTTCACATTTTGACTGTATGTTCTTGGTGG
TGGCTGAAGCGGTGGCTGAAGAGGTGGCGAGCCTAAAAATTAATCAAGAG
AAAAATTTTAGATTGCGCAACAAAATTAACACAGTAAATTTAACACAGGT
TATCTTCTGTACACAACTTGACAAAAAAGATTAACCTTACAGCAACAGTC
CCATAAATATGATTACCAAAGTTTCTAATTGCTATCATATTTATCGTTCC
TCTCTTCTTTCTAAAAATTCGTAAACATTTACAAGAAGCTGAGAGAAATA
CAGTTACTACAATTGAAAGTTCATTTCGAAAAACCATTGTATCAAATGGT
CAGTCAAAATAGAGCAATTATGGAGTGATGGCTAAGTGGTCAAAGGCGTC
AGCGTCTCGAACCAGGGATTCGCGATTCGGATCCCCGCTCCTTCTAATGT
TCCGTACAATTCATTCTAATCTTTAAGGAATAAATAGTCGAGCCGTGAAA
TAGTGAATCTCTAGAGTACGATACTTTGACATATATAATACTCGATTGTT
ACTACCTTCACAAAATCCTGCATCAGCATTTTCGTAATCTTCGTCGTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001412-exon-sc0000010-1575043694:140749..140795 | TCONS_00001412-exon-sc0000010-1575043694:140749..140795 | Clytia hemisphaerica | exon |
| TCONS_00001412-exon-sc0000010-1575043694:139764..139772 | TCONS_00001412-exon-sc0000010-1575043694:139764..139772 | Clytia hemisphaerica | exon |
| TCONS_00001412-exon-sc0000010-1575043694:139247..139290 | TCONS_00001412-exon-sc0000010-1575043694:139247..139290 | Clytia hemisphaerica | exon |
| TCONS_00001412-exon-sc0000010-1510915933:140749..140795 | TCONS_00001412-exon-sc0000010-1510915933:140749..140795 | Clytia hemisphaerica | exon |
| TCONS_00001412-exon-sc0000010-1510915933:139764..139772 | TCONS_00001412-exon-sc0000010-1510915933:139764..139772 | Clytia hemisphaerica | exon |
| TCONS_00001412-exon-sc0000010-1510915933:139247..139290 | TCONS_00001412-exon-sc0000010-1510915933:139247..139290 | Clytia hemisphaerica | exon |
| TCONS_00001412-exon-sc0000010-1491911889:140749..140795 | TCONS_00001412-exon-sc0000010-1491911889:140749..140795 | Clytia hemisphaerica | exon |
| TCONS_00001412-exon-sc0000010-1491911889:139764..139772 | TCONS_00001412-exon-sc0000010-1491911889:139764..139772 | Clytia hemisphaerica | exon |
| TCONS_00001412-exon-sc0000010-1491911889:139247..139290 | TCONS_00001412-exon-sc0000010-1491911889:139247..139290 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000010 | supercontig | sc0000010:139247..140795 - |
Blast
The following BLAST results are available for this feature:
|
