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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001752 ID=TCONS_00001752|Name=TCONS_00001752|organism=Clytia hemisphaerica|type=transcript|length=1863bp
ATTGGATTTTGATAAATATTCTGATTTTTAAGATTGCAGATTAATTCAAA
AAGTGAtacaatttcataaaatttataGAATACATGTTACAGTATATATT
TACACTAAAAATAATGattgttttaaaataaaaacccttattttttcaat
atttagtATGACCTGTATGGTTTATCTGCTTGCAGGAAAACCATCGCGAT
ACTAATTAAAAACCAtcgtcagaaaaaaaaatcagttctACTACTGCTTC
AAGGAAGCGTTAATTTTGTTTCCCTTAAGCTAAAGGAATTAAATTTGTAC
TGTAATGTCacttttaaaatctaaaaaataaatctataaaaaaaatcaag
ctaaaaatgaagatctttgACAAATACTGTTACATAATCGATCAACTTCA
TTGGTTTCTAGACCAAGCTctaacaaatcattttcatcacattgcattaa
atttcgaaaatcaattttctcgTTAATGAATAATTCTTCGTATTTCTCAA
GTTGCGAGTCTTTCAATAATGTTGCGACAGTCTCAAAATCACCGTCTTTG
GAATATCTGCTATCGTCGCTACTCACACTACCAGTAAAGTTattattgaa
ttgaaatttattctttttaaCAATGGTTCGCATACGAACTATAGTGTTTG
TCTCATTTGGGCTACCCATGATAGTTTGTCCGAGTTCTTTCATCAGGGAG
GTCGGTTTAGCCGTATAACGGGGATAATCATCTTCAGAATTTTGCTTGAC
CAATAATTTTATgtcttttttcttgattttggaTTTCAATTTTGCTGGTT
TAACTCGCTTAATACCAGCCATTGAGTAAGGGAGACTGACCATGTACTCC
ATCTGATGATGTAAAGTtggtatgatttttttctcgaCTTGAGTAAGTTC
AGTTTCTTTAAGCATATCAACGGGAATGCCTCCTAAGAGAATTTCACAGA
AAACGTTCATCGTTAACGGGAATACGTGTAAAATAAATTCACCTTCACAT
TGCGAACTAGCTAAAACTAATTTCTCTGTTTTCTTGCGTTCCGCTAATAA
AGTTTCACCGGTTAGTCCGGTATTTTGCATGAAAGATACCGGGAATGTTT
TCATACAGGGTGTGATTAATAACGGAACTTCTTCCTTCTTCAATTCAACC
AATTTCTGTTGCTTGGATTCATACGGCGAGTCAACTTTATAAAATTCACC
TCGAATATTTATGGGTAAGAAAACCATTAATCTACCGGGATGCACTTCGA
CTGATAAatattcattttcatctttttcatcatcttcatcaactagaatt
tgaaaaatggttCCCGGGTGATAAGCGCATCCTTCGTAATTAAACCCGCG
TGTGACCACGACCCATTCAACATTATCTGAACGGTGATTGGCTACTAAGT
CACCAATAGTGTGATAAGGTGCTTGGTCATGTACCAATATATTTTCTACG
CATGCGTCCAAATCAACGGGGATCTCGACTGTCTCGCCTGTACTCGTTTT
AATACATTCCAACTTGACGACTTCTAAAATTTCATGCATCGTGAGAATGT
CACCACGGTTGATATCTCCCGATAGGTCACCATCCAACATCTTCACTGTC
AGAGGGGTTCCAACTTCCTCAGCTGCGATATGTAGAAACGAAGTTGGGTT
ACGATAATAATACAGACCAGATTTATTGACCGGGCTAATCAACGAAAAAG
CACCGTCTGATATTTTACGATTGATACGATGTCCTTTAGAAATGGTCCCC
ATTTTGGTGGGACCTTTCGATAAGGTTGTTGTCATATTCTTGAATGATTC
TTCACggaaaacaaattttcttcaaatatttcaatgtttCTTTCTCTAAA
TCCGAatacaaaa Run BLAST on NCBI protein sequence of TCONS_00001752-protein >TCONS_00001752-protein ID=TCONS_00001752-protein|Name=TCONS_00001752-protein|organism=Clytia hemisphaerica|type=polypeptide|length=479bp
MTTTLSKGPTKMGTISKGHRINRKISDGAFSLISPVNKSGLYYYRNPTSF
LHIAAEEVGTPLTVKMLDGDLSGDINRGDILTMHEILEVVKLECIKTSTG
ETVEIPVDLDACVENILVHDQAPYHTIGDLVANHRSDNVEWVVVTRGFNY
EGCAYHPGTIFQILVDEDDEKDENEYLSVEVHPGRLMVFLPINIRGEFYK
VDSPYESKQQKLVELKKEEVPLLITPCMKTFPVSFMQNTGLTGETLLAER
KKTEKLVLASSQCEGEFILHVFPLTMNVFCEILLGGIPVDMLKETELTQV
EKKIIPTLHHQMEYMVSLPYSMAGIKRVKPAKLKSKIKKKDIKLLVKQNS
EDDYPRYTAKPTSLMKELGQTIMGSPNETNTIVRMRTIVKKNKFQFNNNF
TGSVSSDDSRYSKDGDFETVATLLKDSQLEKYEELFINEKIDFRNLMQCD
ENDLLELGLETNEVDRLCNSICQRSSFLA Run BLAST on NCBI transcript from alignment at sc0000011:990579..992441 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001752 ID=TCONS_00001752|Name=TCONS_00001752|organism=Clytia hemisphaerica|type=transcript|length=1863bp|location=Sequence derived from alignment at sc0000011:990579..992441 (Clytia hemisphaerica)
ttttgtatTCGGATTTAGAGAAAGaaacattgaaatatttgaagaaaatt
tgttttccGTGAAGAATCATTCAAGAATATGACAACAACCTTATCGAAAG
GTCCCACCAAAATGGGGACCATTTCTAAAGGACATCGTATCAATCGTAAA
ATATCAGACGGTGCTTTTTCGTTGATTAGCCCGGTCAATAAATCTGGTCT
GTATTATTATCGTAACCCAACTTCGTTTCTACATATCGCAGCTGAGGAAG
TTGGAACCCCTCTGACAGTGAAGATGTTGGATGGTGACCTATCGGGAGAT
ATCAACCGTGGTGACATTCTCACGATGCATGAAATTTTAGAAGTCGTCAA
GTTGGAATGTATTAAAACGAGTACAGGCGAGACAGTCGAGATCCCCGTTG
ATTTGGACGCATGCGTAGAAAATATATTGGTACATGACCAAGCACCTTAT
CACACTATTGGTGACTTAGTAGCCAATCACCGTTCAGATAATGTTGAATG
GGTCGTGGTCACACGCGGGTTTAATTACGAAGGATGCGCTTATCACCCGG
Gaaccatttttcaaattctagttgatgaagatgatgaaaaagatgaaaat
gaatatTTATCAGTCGAAGTGCATCCCGGTAGATTAATGGTTTTCTTACC
CATAAATATTCGAGGTGAATTTTATAAAGTTGACTCGCCGTATGAATCCA
AGCAACAGAAATTGGTTGAATTGAAGAAGGAAGAAGTTCCGTTATTAATC
ACACCCTGTATGAAAACATTCCCGGTATCTTTCATGCAAAATACCGGACT
AACCGGTGAAACTTTATTAGCGGAACGCAAGAAAACAGAGAAATTAGTTT
TAGCTAGTTCGCAATGTGAAGGTGAATTTATTTTACACGTATTCCCGTTA
ACGATGAACGTTTTCTGTGAAATTCTCTTAGGAGGCATTCCCGTTGATAT
GCTTAAAGAAACTGAACTTACTCAAGtcgagaaaaaaatcataccaACTT
TACATCATCAGATGGAGTACATGGTCAGTCTCCCTTACTCAATGGCTGGT
ATTAAGCGAGTTAAACCAGCAAAATTGAAAtccaaaatcaagaaaaaaga
cATAAAATTATTGGTCAAGCAAAATTCTGAAGATGATTATCCCCGTTATA
CGGCTAAACCGACCTCCCTGATGAAAGAACTCGGACAAACTATCATGGGT
AGCCCAAATGAGACAAACACTATAGTTCGTATGCGAACCATTGttaaaaa
gaataaatttcaattcaataatAACTTTACTGGTAGTGTGAGTAGCGACG
ATAGCAGATATTCCAAAGACGGTGATTTTGAGACTGTCGCAACATTATTG
AAAGACTCGCAACTTGAGAAATACGAAGAATTATTCATTAAcgagaaaat
tgattttcgaaatttaatgcaatgtgatgaaaatgatttgttagAGCTTG
GTCTAGAAACCAATGAAGTTGATCGATTATGTAACAGTATTTGTcaaaga
tcttcatttttagcttgattttttttatagatttattttttagattttaa
aagtGACATTACAGTACAAATTTAATTCCTTTAGCTTAAGGGAAACAAAA
TTAACGCTTCCTTGAAGCAGTAGTagaactgatttttttttctgacgaTG
GTTTTTAATTAGTATCGCGATGGTTTTCCTGCAAGCAGATAAACCATACA
GGTCATactaaatattgaaaaaataagggtttttattttaaaacaatCAT
TATTTTTAGTGTAAATATATACTGTAACATGTATTCtataaattttatga
aattgtaTCACTTTTTGAATTAATCTGCAATCTTAAAAATCAGAATATTT
ATCAAAATCCAAT Coding sequence (CDS) from alignment at sc0000011:990579..992441 >TCONS_00001752 ID=TCONS_00001752|Name=TCONS_00001752|organism=Clytia hemisphaerica|type=CDS|length=1440bp|location=Sequence derived from alignment at sc0000011:990579..992441 (Clytia hemisphaerica)
ATGACAACAACCTTATCGAAAGGTCCCACCAAAATGGGGACCATTTCTAA
AGGACATCGTATCAATCGTAAAATATCAGACGGTGCTTTTTCGTTGATTA
GCCCGGTCAATAAATCTGGTCTGTATTATTATCGTAACCCAACTTCGTTT
CTACATATCGCAGCTGAGGAAGTTGGAACCCCTCTGACAGTGAAGATGTT
GGATGGTGACCTATCGGGAGATATCAACCGTGGTGACATTCTCACGATGC
ATGAAATTTTAGAAGTCGTCAAGTTGGAATGTATTAAAACGAGTACAGGC
GAGACAGTCGAGATCCCCGTTGATTTGGACGCATGCGTAGAAAATATATT
GGTACATGACCAAGCACCTTATCACACTATTGGTGACTTAGTAGCCAATC
ACCGTTCAGATAATGTTGAATGGGTCGTGGTCACACGCGGGTTTAATTAC
GAAGGATGCGCTTATCACCCGGGaaccatttttcaaattctagttgatga
agatgatgaaaaagatgaaaatgaatatTTATCAGTCGAAGTGCATCCCG
GTAGATTAATGGTTTTCTTACCCATAAATATTCGAGGTGAATTTTATAAA
GTTGACTCGCCGTATGAATCCAAGCAACAGAAATTGGTTGAATTGAAGAA
GGAAGAAGTTCCGTTATTAATCACACCCTGTATGAAAACATTCCCGGTAT
CTTTCATGCAAAATACCGGACTAACCGGTGAAACTTTATTAGCGGAACGC
AAGAAAACAGAGAAATTAGTTTTAGCTAGTTCGCAATGTGAAGGTGAATT
TATTTTACACGTATTCCCGTTAACGATGAACGTTTTCTGTGAAATTCTCT
TAGGAGGCATTCCCGTTGATATGCTTAAAGAAACTGAACTTACTCAAGtc
gagaaaaaaatcataccaACTTTACATCATCAGATGGAGTACATGGTCAG
TCTCCCTTACTCAATGGCTGGTATTAAGCGAGTTAAACCAGCAAAATTGA
AAtccaaaatcaagaaaaaagacATAAAATTATTGGTCAAGCAAAATTCT
GAAGATGATTATCCCCGTTATACGGCTAAACCGACCTCCCTGATGAAAGA
ACTCGGACAAACTATCATGGGTAGCCCAAATGAGACAAACACTATAGTTC
GTATGCGAACCATTGttaaaaagaataaatttcaattcaataatAACTTT
ACTGGTAGTGTGAGTAGCGACGATAGCAGATATTCCAAAGACGGTGATTT
TGAGACTGTCGCAACATTATTGAAAGACTCGCAACTTGAGAAATACGAAG
AATTATTCATTAAcgagaaaattgattttcgaaatttaatgcaatgtgat
gaaaatgatttgttagAGCTTGGTCTAGAAACCAATGAAGTTGATCGATT
ATGTAACAGTATTTGTcaaagatcttcatttttagcttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001752-exon-sc0000011-1491911889:990579..992441 | TCONS_00001752-exon-sc0000011-1491911889:990579..992441 | Clytia hemisphaerica | exon |
| TCONS_00001752-exon-sc0000011-1510915933:990579..992441 | TCONS_00001752-exon-sc0000011-1510915933:990579..992441 | Clytia hemisphaerica | exon |
| TCONS_00001752-exon-sc0000011-1575043694:990579..992441 | TCONS_00001752-exon-sc0000011-1575043694:990579..992441 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011 | supercontig | sc0000011:990579..992441 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
The following BLAST results are available for this feature:
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