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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001753 ID=TCONS_00001753|Name=TCONS_00001753|organism=Clytia hemisphaerica|type=transcript|length=1671bp
CGATTTTGAGTGTTACATTCAACTGATTGCCAAGAAGGGAAACACATCTC
TACTATTTCCACATTCGAACACTGGAAAAAAAGGATCTGGAAAATCATCA
AATAGTCCTGTCAAGCTGTGTTTACAAGATATGGATATCAGCTTTATGTG
TGGAGTATGTTTGCCTTTTTCATTCCGTATCATTTTCACTGTCTGTTATG
GTTTGATGACAATTTTTGGTGGGATTGGGAATGTTATTTCCATCGTCAGT
ATTTATAAAAAGTATCAAAACCCAAACGACCGAGACGAGATTGATCTGAT
TTTATTATCACTTGCTGTTTGTGATGCATTGGTTTCGATCACTATTTATC
CTGGATATCCTTGGCTAAACTTTTGGACCTTTGATGAATTTGACTCGTTC
CCCAACAGGCTTTTTGGCATGTTGGTTTTAAGCTTGACTTCGACCTCATC
TTTAACCATCGTGTTGTTAGCCGCCATCAAATATCTGAAGATTTCAAGAC
CGAGCACTTTCGAAAATATTATAACTGCAAGACGATTGCGAGCCATGATA
CTGATGTGTTGGTTTTTACCATTGTTAGCGTTCACGCCTTCTCTGCTCGA
TAAAGAACTAGTCTGGACAATCAACGTTCTCTCATTCATAGGAACTCTAA
TCACTCTGATAGCTTTGCCAGTATTCTGTTCACTAATACTGCATGTCTTC
AAGAAATCTAGGAGACAAGTAGAGGAAATGGCCAATTCAACTGTCCAACA
AGAATCGAACAACCTGGCAACAGAGCGTATTTCCAACAAGTTGGTGCGGC
GTGCACTATGGTTGATCGGTGTCTATTTCGCGTGTATAAGTCTCACTTTT
TTCTCCATCACTTGTTATTCCTTTGGTGTCACGAATGAAGGTTACCTTTA
TCAAGTTACGAATGTGTTTTTTCTTGGCAATAGTTGTGCCAACCCTTGCA
TTTACATGTATAAAGACAAAAAACTCCGGAAGATTGCAGTGAATTACTTC
AAAAGATCGCAAAGAGTATAAGACAATAACTTAATGCCCAATATCATAAC
GATTGACAATGTTGAACACTTATTTGTATGAAAAACATTGGAAATCGCTG
GAAATGATCCTCCAGTAAGCAATGGGCGGGCCCTTCGACATTGCTACTTA
CGAAGAGAGGGGATGGAGATTATATTGTAACTTTTTCCACCATGTTAACG
CAGCATGTTCGATGTTCTTTTTATTAGTATGCAGTAACAGTGAAGCAAAT
TAACTACccggagggggtactagggttggcggatgaggggtatgtgacCT
CCGAAGACCGACTCTTATAGAGACTGATTTATTCAGTGCAAAAATGCCCT
TTAGAAAGactgtttttgaaagttttttgaaaatattctccgatttttga
aaaaagtcttaccctcttagagagacttttttacaatttttactctcgaa
ctcaaaaaaaattctctaaaaatcgtgaattttccgacccttagagaaac
tactttaaaattattcttagagactttggaaggaGAAAAAACCGACCTTT
CTCATCACATCTGCACATATTCAGAACaaatttttgcctaagtacccccc
cctcTCCTCCGGGATTAgctaaagaatttttttcgtttttgcCCGAGTGA
CGCAGGAGGAgttctttcttt Run BLAST on NCBI protein sequence of TCONS_00001753-protein >TCONS_00001753-protein ID=TCONS_00001753-protein|Name=TCONS_00001753-protein|organism=Clytia hemisphaerica|type=polypeptide|length=339bp
DFECYIQLIAKKGNTSLLFPHSNTGKKGSGKSSNSPVKLCLQDMDISFMC
GVCLPFSFRIIFTVCYGLMTIFGGIGNVISIVSIYKKYQNPNDRDEIDLI
LLSLAVCDALVSITIYPGYPWLNFWTFDEFDSFPNRLFGMLVLSLTSTSS
LTIVLLAAIKYLKISRPSTFENIITARRLRAMILMCWFLPLLAFTPSLLD
KELVWTINVLSFIGTLITLIALPVFCSLILHVFKKSRRQVEEMANSTVQQ
ESNNLATERISNKLVRRALWLIGVYFACISLTFFSITCYSFGVTNEGYLY
QVTNVFFLGNSCANPCIYMYKDKKLRKIAVNYFKRSQRV Run BLAST on NCBI transcript from alignment at sc0000011:1111836..1113506 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001753 ID=TCONS_00001753|Name=TCONS_00001753|organism=Clytia hemisphaerica|type=transcript|length=1671bp|location=Sequence derived from alignment at sc0000011:1111836..1113506 (Clytia hemisphaerica)
aaagaaagaacTCCTCCTGCGTCACTCGGgcaaaaacgaaaaaaattctt
tagcTAATCCCGGAGGAgaggggggggtacttaggcaaaaatttGTTCTG
AATATGTGCAGATGTGATGAGAAAGGTCGGTTTTTTCtccttccaaagtc
tctaagaataattttaaagtagtttctctaagggtcggaaaattcacgat
ttttagagaattttttttgagttcgagagtaaaaattgtaaaaaagtctc
tctaagagggtaagacttttttcaaaaatcggagaatattttcaaaaaac
tttcaaaaacagtCTTTCTAAAGGGCATTTTTGCACTGAATAAATCAGTC
TCTATAAGAGTCGGTCTTCGGAGgtcacatacccctcatccgccaaccct
agtaccccctccggGTAGTTAATTTGCTTCACTGTTACTGCATACTAATA
AAAAGAACATCGAACATGCTGCGTTAACATGGTGGAAAAAGTTACAATAT
AATCTCCATCCCCTCTCTTCGTAAGTAGCAATGTCGAAGGGCCCGCCCAT
TGCTTACTGGAGGATCATTTCCAGCGATTTCCAATGTTTTTCATACAAAT
AAGTGTTCAACATTGTCAATCGTTATGATATTGGGCATTAAGTTATTGTC
TTATACTCTTTGCGATCTTTTGAAGTAATTCACTGCAATCTTCCGGAGTT
TTTTGTCTTTATACATGTAAATGCAAGGGTTGGCACAACTATTGCCAAGA
AAAAACACATTCGTAACTTGATAAAGGTAACCTTCATTCGTGACACCAAA
GGAATAACAAGTGATGGAGAAAAAAGTGAGACTTATACACGCGAAATAGA
CACCGATCAACCATAGTGCACGCCGCACCAACTTGTTGGAAATACGCTCT
GTTGCCAGGTTGTTCGATTCTTGTTGGACAGTTGAATTGGCCATTTCCTC
TACTTGTCTCCTAGATTTCTTGAAGACATGCAGTATTAGTGAACAGAATA
CTGGCAAAGCTATCAGAGTGATTAGAGTTCCTATGAATGAGAGAACGTTG
ATTGTCCAGACTAGTTCTTTATCGAGCAGAGAAGGCGTGAACGCTAACAA
TGGTAAAAACCAACACATCAGTATCATGGCTCGCAATCGTCTTGCAGTTA
TAATATTTTCGAAAGTGCTCGGTCTTGAAATCTTCAGATATTTGATGGCG
GCTAACAACACGATGGTTAAAGATGAGGTCGAAGTCAAGCTTAAAACCAA
CATGCCAAAAAGCCTGTTGGGGAACGAGTCAAATTCATCAAAGGTCCAAA
AGTTTAGCCAAGGATATCCAGGATAAATAGTGATCGAAACCAATGCATCA
CAAACAGCAAGTGATAATAAAATCAGATCAATCTCGTCTCGGTCGTTTGG
GTTTTGATACTTTTTATAAATACTGACGATGGAAATAACATTCCCAATCC
CACCAAAAATTGTCATCAAACCATAACAGACAGTGAAAATGATACGGAAT
GAAAAAGGCAAACATACTCCACACATAAAGCTGATATCCATATCTTGTAA
ACACAGCTTGACAGGACTATTTGATGATTTTCCAGATCCTTTTTTTCCAG
TGTTCGAATGTGGAAATAGTAGAGATGTGTTTCCCTTCTTGGCAATCAGT
TGAATGTAACACTCAAAATCG Coding sequence (CDS) from alignment at sc0000011:1111836..1113506 >TCONS_00001753 ID=TCONS_00001753|Name=TCONS_00001753|organism=Clytia hemisphaerica|type=CDS|length=1020bp|location=Sequence derived from alignment at sc0000011:1111836..1113506 (Clytia hemisphaerica)
TTATACTCTTTGCGATCTTTTGAAGTAATTCACTGCAATCTTCCGGAGTT
TTTTGTCTTTATACATGTAAATGCAAGGGTTGGCACAACTATTGCCAAGA
AAAAACACATTCGTAACTTGATAAAGGTAACCTTCATTCGTGACACCAAA
GGAATAACAAGTGATGGAGAAAAAAGTGAGACTTATACACGCGAAATAGA
CACCGATCAACCATAGTGCACGCCGCACCAACTTGTTGGAAATACGCTCT
GTTGCCAGGTTGTTCGATTCTTGTTGGACAGTTGAATTGGCCATTTCCTC
TACTTGTCTCCTAGATTTCTTGAAGACATGCAGTATTAGTGAACAGAATA
CTGGCAAAGCTATCAGAGTGATTAGAGTTCCTATGAATGAGAGAACGTTG
ATTGTCCAGACTAGTTCTTTATCGAGCAGAGAAGGCGTGAACGCTAACAA
TGGTAAAAACCAACACATCAGTATCATGGCTCGCAATCGTCTTGCAGTTA
TAATATTTTCGAAAGTGCTCGGTCTTGAAATCTTCAGATATTTGATGGCG
GCTAACAACACGATGGTTAAAGATGAGGTCGAAGTCAAGCTTAAAACCAA
CATGCCAAAAAGCCTGTTGGGGAACGAGTCAAATTCATCAAAGGTCCAAA
AGTTTAGCCAAGGATATCCAGGATAAATAGTGATCGAAACCAATGCATCA
CAAACAGCAAGTGATAATAAAATCAGATCAATCTCGTCTCGGTCGTTTGG
GTTTTGATACTTTTTATAAATACTGACGATGGAAATAACATTCCCAATCC
CACCAAAAATTGTCATCAAACCATAACAGACAGTGAAAATGATACGGAAT
GAAAAAGGCAAACATACTCCACACATAAAGCTGATATCCATATCTTGTAA
ACACAGCTTGACAGGACTATTTGATGATTTTCCAGATCCTTTTTTTCCAG
TGTTCGAATGTGGAAATAGTAGAGATGTGTTTCCCTTCTTGGCAATCAGT
TGAATGTAACACTCAAAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001753-exon-sc0000011-1491911889:1111836..1113506 | TCONS_00001753-exon-sc0000011-1491911889:1111836..1113506 | Clytia hemisphaerica | exon |
| TCONS_00001753-exon-sc0000011-1510915933:1111836..1113506 | TCONS_00001753-exon-sc0000011-1510915933:1111836..1113506 | Clytia hemisphaerica | exon |
| TCONS_00001753-exon-sc0000011-1575043694:1111836..1113506 | TCONS_00001753-exon-sc0000011-1575043694:1111836..1113506 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011 | supercontig | sc0000011:1111836..1113506 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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