TCONS_00001797 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001797
Unique NameTCONS_00001797
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2789

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001797 ID=TCONS_00001797|Name=TCONS_00001797|organism=Clytia hemisphaerica|type=transcript|length=2789bp
gAACTGAAGAACTAAAAAATAATGAACAGATTGGAGGATCTACATCTTCA
TCAGTTACAACTATATGCTTATTGTTCAATCGCTCAAAGGCTATTACAAA
AATGTTTAATGTGTCAAGCTCTAGCATGTAAACAGGCTTCTTCGAAAGAC
CCTTTAACAGCATTATCAGAAGTTCTTGAACATCACAAAGCTAAGCTGAA
AAAGATGAACAACGTTGTAACCAGCGCTAATAAAGTGGTTATCTACGATG
ATTTTGATGCTGATTTATTGAACACTTCCATCAATATTGGTAAACTAGAT
GTTTGTGTTTTGATAGAGATACTACAAGGTATTGATTCCTTTGAAACATG
CCAAAAAAATACACCAGCTGGTCTTCAATGTCTTGGTGTCAATCACCAGA
ACACTTGTTGTGGACAATGCCTTCATCAATGTATAAAGTGTTTAAAGGTC
AAATGTAAAGGAAAATGCTGTGATATAGATTCGAAGAAATCTTGTAATCA
TCCTTGCCAACAGTGTGGTCGCAATGAAGATGAATGCAAGAAATATAAAA
AGaCTACCATCTTGAAAGCTAAGGGGAATCGTACGGGACCggcaaaaacc
aaaacaaagattgcgaattttttttcgaaatctgacaTATATGATTGATG
CGCTCCTACAACTTTGAAATCAAATAGCACTGGTCATTCAACAAGGAAAG
AGGCACAGTCAAGTGTAAGCTCTCGATGGCAAGTAAAAAATCTAATACCA
GtagTTTCTCTGCTAAGTTGATTAATGGAGGCATAGCTGGTTCAATTGGT
ACATGTTGTGTTTTCCCACTTGACTTAGCCAAAACAAGAATTCAAGATCA
AAGAACATTCTCAAAAACAACTGGACAGGCTGCGACAAGACTCTATAAAA
ATGTCTTCCATTGCATGTACATTGTTGGAAAAACTGAGGGAGTCAGAGGG
CTCTACAAAGGGCTTGGTATTAACTTATTCCTTGTAAATCCTGAGAAGGC
AATTAAATTAGCTGTGAATGACCAATGCAGACAACACCTGGGATCAAAAC
AAGGATCTATGTTACCTTTACGGTATGAAGCTATGGCAGGTGGCTTAGCT
GGAATGTGCCAGATTTTTATAACAACACCAATGGAATTCTTAAAAATACA
AATGCAAGTTGCTGGACGAAATGCTGAGTCTGCACAAACAAGTGCTGTCA
AGGTAGCAGTTAATCTTATGCGACAAAGAGGAATTGCTGGTATTTACAAA
GGAACTGGTGCTACATTTATAAGGGATGTACCATTCTCCTGCGTCTATTT
CCCATTATTCTCATACTTAAACTCACTGGGATACAAAGATGGTCGAAAGC
CACATCCTGTTCATTCACTGGCTTCAGGGTTAGGATCTGGCGTATTTAGC
GCTGTCCTTGTTACTCCTATGGATGTTGTCAAAACGCGATTACAAGTCTT
GAAACGTATGGAAGGAGAACCTATCTATAACGGCTGGTCCGATGCTGTCA
GTAAAATATACAGAAACGAGGGTCTATCTGCATTCTTCAAAGGAGCTATC
ACACGTGCCATTGTGGTGGCGCCCTTGTTTGGAATAGCTCAAATGGTTTA
TTTTGTTGGTTTTGCAGAGACTATTATGGAGCGTGCATCTCAACAAAGga
tcaaagatttttcttgaaatcgaaaaatatttatccccTCGAAAGAATTC
CTAAACGACTCAAATTTCTTTAACTATAGTTCTAAAAACGAGAATCTTCT
GCCCCACAATCTTCAAAGGATAACtaatttctttttagtttaTGTTACGT
CTCGACAGTTgtcaaattaaaaatgaaatgatCGGTACCTTCATGCGAGA
GCATTGTTGATTTACAATCCCCTCGAAGAGAAACCCTTagttgtttttaa
tcaattactttttatattttaatatGTCATATACTTTAAGTAGATAAAAT
CGCTCACGACAATGTTAAAAATAATAgagtttttcataaaaatattgtTA
ATATATTATAGAAAATTACAATCTATAAAGGCTTTGTATCATaagaattc
aaaatatttttactttatcgTTTtacatatacagattttttacGTAAAGG
TTGATTAATggtgtgtttttttcttttttttcttttgtataattttttta
gtagtgtataatatttatttggcattttattttttaaacacaCCATTAGC
AACTCTCGGAAATGAtcataattagaaatttctgtAAGGATTATAataag
ttttgacattttctcgtaACGCTTACCAGGAAATCaaggaattttcaaaa
tgagattcAAAAATTATTCTGGTTTTCTACTAGTGAACAATTATTGCTCG
TTCGTAATGCTTTAAGTGAATAGCATTACTGGTAAGCTTTTGGAGCTCAC
ACGATTGAAAGCTTTTACTCTGAGAATTCGCCACCCACGCCGAgagtaaa
aatattgaaaagtgaAACAGATTTATTTGGTCAGCTTAACACTGTCAAGA
TTCAAAATTGACCCCGTCTGTTTAAATAGATTTTGAGATTCCTTTCAAAA
CATACCTCGGATTGCAAAACTATGAAAATTTAGTgttattttgattgttt
caatagACGATGGAAATCAACATTTTTTCTANACTATGAaaatttagtgt
tttttttattgtttcaatagACGATGGAAATCAacattttttctattatt
ttatcACATAttgcaaaatttgttttatactGAATTTGTTTAATGAACTA
TCCCAATTTTTTGGTAcagtatttgatttttttaagcca
Run BLAST on NCBI

transcript from alignment at sc0000012:652657..663390+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001797 ID=TCONS_00001797|Name=TCONS_00001797|organism=Clytia hemisphaerica|type=transcript|length=10734bp|location=Sequence derived from alignment at sc0000012:652657..663390+ (Clytia hemisphaerica)
gAACTGAAGAACTAAAAAATAATGAACAGATTGGAGGATCTACATCTTCA
TCAGTTACAACTATATGCTTATTGTTCAATCGCTCAAAGGCTATTACAAA
AATGTTTAATGTGTCAAGCTCTAGCATGTAAACAGGCTTCTTCGAAAGAC
CCTTTAACAGCATTATCAGAAGTTCTTGAACATCACAAAGCTAAGCTGAA
AAAGATGAACAACGTTGTAACCAGCGCTAATAAAGTGGTTATCTACGATG
ATTTTGATGCTGATTTATTGAACACTTCCATCAATATTGGTAAACTAGAT
GTTTGTGTTTTGATAGAGATACTACAAGGTATTGATTCCTTTGAAACATG
CCAAAAAAATACACCAGCTGGTCTTCAATGTCTTGGTGTCAATCACCAGA
ACACTTGTTGTGGACAATGCCTTCATCAATGTATAAAGTGTTTAAAGGTC
AAATGTAAAGGAAAATGCTGTGATATAGATTCGAAGAAATCTTGTAATCA
TCCTTGCCAACAGTGTGGTCGCAATGAAGATGAATGCAAGAAATATAAAA
AGGTATGCTGTTCGGATTGGTTGATCTGTAGATTGTGTTTTGGCTGtttc
ttgaaaaaagaaaaagttgattCGTTTGTACAGTATCAGGTTATTGGGAA
TAATTCAGTTTCCTGCATTAAAATGGAAATGAAGTTTGCATTGCCTTTGC
TATTGAATGTGCGAAATTTAACAATGCATTTGACCATGAAAGAGTGCATT
GAACTTGACCAGTCTACTTTTCAATGTAAACAGTTACCAAGTATCACAAA
TTGGAATGATATGTCGATAGTTGTTGATAAAAGTATGAGAACGTTACTTC
AATTTCTCGTTTCCATACGATTCTTATCGATTGTGGAGGAGAATCGGTTT
GATACGGATATTACAAAAGTCGGTAATATGGTAAACCAGGAGGAACTATT
GCAAGTTTATGAGGAGAGAATTAGAACATTTGGCACAATGGAGCAATTAC
TGGAGATTGGCCAACGGGGTGTAGATAGTCATCAGCATATACAAGAGATG
CGACATCAGATTGATGATATTTCATTTCAGATTGACAATGTTTTGACCAA
ACTTGACACCTTTtcattaattttaaaaatacaatttaCTTTTCCCATTC
CGATTGATTTAGATTTAGATTGCGATGAAGTTGAAAGAATCGAATGTTCA
ATAGAGAGAACAATGGAATCGATTTTTCTTGGTGATTTTAAAGTGTCAAC
TTGTGGGTTTATACCAACACCCTTTACTGCCAACGAGAGAACAATAGCTT
TGGAATTTTCCATCCAGAAAGTACGTAATGGAATTTCAACAAGCGTTGAG
GAGTACAACGATCGGAAATCAGAAGGATCAAAAAGTCTTTgggaaaacat
taaaaaaggaTTTTCTACAGACTTGAATGATGTCCATGTGAAACTATTTT
ACTGGTCAGTCTTCCGTCTTTGAATGACTTTAGAACAcgaatttttataa
attttaatgATAATAAATTAAGTTTTGGTACATTTTTATACAATACATTG
AAGGAGAAATCGCGTATATTTCACCATTtcctttattaaaagaaaaaaaa
attcaaaaaactctCGTGACAGCATTTTTGCAAAACACGCTTTTTTTAGC
ATGGATGGTATGTTACtaagtttttttagattttcaggcttaaatgttca
tAAATTGTTCCTATTGTAAATAtgaattaagaacatttcatttattttga
GCCTGTAATGTTCTTAGATCTGATTAGCTTTatgctacacgctttttttt
ataagaatggtgttttttcatttcagcatggatattcttaactttttggc
gtaAATCacccaaaaatattcttacggtattcttaggttaagatcgaaat
tggcaatctacaggttaaattgcattaaaaatggcattcttaggttcagt
tgctaaattccatgatggtgatattcttaccatattcttaattttttggc
cattttcattatggactttcttataaagtgtattttattaaaaaaaaagc
gtgtagcggAAGATAACCGATTAATCATATTGACTATAAATCCCTTGGTC
TTATTAAATATTCGCTAAAAAGCTACAACATCAGATTGTACTcaagtttc
agcctcgtgttcttatgaaattatAAAAAGCGCTTTTATCTTTAACTTTT
GGAaatgctacacgttttttataagaacaaactatgtaagaacataaggc
ttcgatggccaaaacgTTAAAAacaagtcaagaacattttatactttgcg
gactctaaaagcCTCTAAAACAccatatttcttaggaaaattggcaaaaa
cacTCGCAAAtgatgaaattaagaacatgttaactTTTTTCGGCTTGAAA
CTTAAaaagaaggcttcaaaaattttggatactcttataaaaaaacgtgt
accaaaATTTTATCTTGAGTGATTTTACCTCGATCATGTGATCTGGTTTT
AAGCAAGAAAGAAATTctgaatgaaaagaaaactgtAACTAAACGGACAG
TTTGCCGGATCTAAAGTTGTTGTGATGATGAATGTTGTGACATATAAATA
AAATCACGCTTATGATGTCACTAAAAAGCAtgtatttaaaatatttacag
tTCAAAGCTCAGTGTTGTTTTGTTACTGCAATAACGGGAAACATTGATAA
AGTAACAATTGAATGTAATCATCTAATTATATGTAATCATAATTAGTTTT
AGACAATGGATTACATTTTTGTCGCCCAACTTTAAAATGATACTTTTCCT
TTTCAAAACCACATTCTTGTTATCGTTACAGAGTTGTTTGGTGCTCAGGG
AGCTGAATTCTTAAAAAGTTTTGGAGCGCATCACAATTTCTTTGAAATCA
ACGCGTTTTTCATTGGATTAAAAGTACGTATTTTGAGatcatcattttta
ttttttctgtgtttggAATATGTCAATATATTCAAACGATTATTTGCTTC
CAATATTCCATTTTAAACACTAAACGCACATCGTGTGATAGCATGGACGT
TGATTAGAGCGAATATTTAACTCTTAGagtttattttcaaaagatttttt
ccttaaCTTCCGAAAAGTTCGACCGTCATTATTTACCGGTTTAAAAGTTG
CAGAGAGCTATATAACGTATCGATAATAGACATTGAAAAAACGTAATTGC
TCCTTTGAACTTTATTTGGCGGCCAGGATATCAgataaaaaagactttcc
agAGTCCAGAGTTTTTTTTGCAAGAAATTGTGCACACGCCTATTCTGGGT
GTTGTGGCTCCTTCGTTTATTGTACACCAGTTTGTACACCCATTCACAGC
GGTTTACTTGGCAGGTGAACGAAGGAATGTTCGTCCAGGTCATGTGTGAG
GTCAAATGGGTAGTCAGTCCTCCAAGGTGCTGATGGTTGCTCATTAAATG
TTTAGTTGCGAATATGggcctaaaaatatttttgggattttttccgCTTA
AACTAATTTAGACTATATAAtacgcgaaaaaaaatttgacgtcaatttcg
agataaaagtcaaatttgaatttgaacgCTTATGCGAAGACCCTCGTTTT
CTGATAAGGCAGAAGAACGCTTGGCcatgacttgaaaaggtttgttACGT
ACATGGAGACACGAGTTTGGCCTAAAAgtctattttattgtttttatcgt
TTTTCATGTCCGTTGCTTTTGTCTCCTGCGTACTCAGTACTCATAAAATT
TCCGGACCATCATTTAGAAATGTTAAAGGGAATACTGTGATTTACGATGA
CCGTACATATTAAACCAATTAACGCTTAGAAGCTGNTAGACATTGAAAAA
ACGTAATTGCTCCTTTGAACTTTATTTGGCGGCCAGGATATCAgataaaa
aagactttccagAGTCCAGAGTTTTTTTTGCAAGAAATTGTGCACACGCC
TATTCTGGGTGTTGTGGCTCCTTCGTTTATTGTACACCAGTTTGTACACC
CATTCACAGCGGTTTACTTGGCAGGTGAACGAACGAATGTTCGTCCAGGT
CATGTGTGAGGTCAAATGGGTAGTCAGTCCTCCAAGGTGCTGATGGTTGC
TCATTAAATGTGTAGTTGCGAATATGggcctaaaaatatttttgggattt
tttccgCTTAAACTAATTTAGACTATATAAtacgcgaaaaaaaatttgac
gtcaatttcgagataaaagtcaaatttgaatttgaacgCTTATGCGAAGA
CCCTCGTTTTCTGATAAGGCAGAAGAACGCTTGGCcatgacttgaaaagg
tttgttACGTACATGGAGACACGAGTTTGGCCTAAAAgtctattttattg
tttttatcgtTTTTCATGTCCGTTGCTTTTGTCTCCTGCGTACTCAGTAC
TCATAAAATTTCCGGACCATCATTTAGAAATGTTAAAGGGAATACTGTGA
TTTACGATGACCGTACATATTAAACCAATTAACGCTTAGAAGCTGCAAAG
TTAGCaattaattaaaaatgaaataaaaagtcCGTGATTTATTATGATAT
CTcctatttaaatttttttagttaGCTTTTTATCTTTCTATCAAGTTTGA
TAACACCGCGTTTTTCTTGTGTTTGTATATGTTGCAGGGGAAGTTTCTCT
CTACATCGAGTAGTTCGTGGGTATTTCCCTGTGGTTGGGTGCAACATTGC
TTAAAAACCACATGTCATTTActgacaattaaaaaaaaaaggatatAGGA
GCAAAGTACACAGTGACTGTGATTTGATGAGCgattataaaattatcatt
ttgcTCCGTATATTGTGTTGCTTTTATTTCAATGTAACCGTCTCCtctgt
caatcaaaaaactttcgagAAACAATTAAAATTTCATTATATTGTTGCCA
TCCTGTAGCGCGGTGATTTTTGAATCGACAATGTTTGTATTCagactttc
actttcgttttgattcagaattttttttttgtttatatagaCTACCATCT
TGAAAGCTAAGGGGAATCGTACGGGACCggcaaaaaccaaaacaaagatt
gcgaattttttttcgaaatctgacaTATATGATTGATGCGCTCCTACAAC
TTTGAAATCAAATAGCACTGGTCATTCAACAAGGAAAGAGGCACAGTCAA
GTGTAAGCTCTCGATGGCAAGTAAAAAATCTAATACCAGGTATAATTTTC
CTTAATATTTTTCTTACCCAACGTTGCTTTACCTTTTGTATGTAATGAga
ggatttttttcagaaaactgacaattttgaaaacaagattAACATTTTAT
GTAACAACATAAACATCTCTGCCATCCCATCCGAATTTATGTGTATTTTT
TATGAATCatatgaaaaagtatttttctgaatgcaatttgatttttcatt
caGCTTCCAGCCGTTGTTCTGGTTAATTTGCATATATATATANAGGATAT
AGGAGCAAAGTACACAGTGACTGTGATTTGATGAGCgattataaaattat
cattttgcTCCGTATATTGTGTTGCTTTTATTTCAATGTAACCGTCTCCt
ctgtcaatcaaaaaactttcgagAAACAATTAAAATTTCATTATATTGTT
GCCATCCTGTAGCGCGGTGATTTTTGAATCGACAATGTTTGTATTCagac
tttcactttcgttttgattcagaattttttttttgtttatatagaCTACC
ATCTTGAAAGCTAAGGGGAATCGTACGGGACCggcaaaaaccaaaacaaa
gattgcgaattttttttcgaaatctgacaTATATGATTGATGCGCTCCTA
CAACTTTGAAATCAAATAGCACTGGTCATTCAACAAGGAAAGAGGCACAG
TCAAGTGTAAGCTCTCGATGGCAAGTAAAAAATCTAATACCAGGTATAAT
TTTCCTTAATATTTTTCTTACCCAACGTTGCTTTACCTTTTGTATGTAAT
GAgaggatttttttcagaaaactgacaattttgaaaacaagattAACATT
TTATGTAACATCATAAACATCTCTGCCATCCCATCCGAATttatgtgtat
tttttaatgaatcatatgaaaaagtatttttctgaatgCAATTTGGTTTT
TCATTCAGCTTCCAGCCGTTGTTCTGGTTAATTTGCATATATATATAATT
CTTCGATTATTAAAATGGGGAGATTAAATGAGATTAAATGCTTATGAACA
TTGTGAAAACCAGtagtttttgtcaaaaattctagatttttgtcaaaacc
cttttgaaaatgaaataaattagtTGAAAAAGAGAATcccacaaaaatta
aattacctttgaaaaaaaagtgccTTGTGAAAATTTGTGGCTtcccaagc
gatttaaagtacctgaaaatcagaCCTCCAGATTTGGTCTGGTATTACGA
GCGGTCTAGTAGCGGTCAAATTTTTAGACCGGTCCTGACTGCTCGTTGGA
CCGGTCCAGGCCATTCGTTAGACCAGTCCAGGTCGCTAGTTAATGATTTT
TAGTAACGATTACATTAAAAAATTGTTGTAGAAGGATGTCGACCGGGCGA
TCGGGGCCAGTCTGAGACCGGATGATTGGGGCCGGTCTGAGACCAGACAC
TTCGCAGCGGCACCTAAATTAACTAGACTcataccgtgagagtgggtaac
ttgcatcagtggaggctaacatgcatagccctaaaatgaatgacctggct
ggtcattaaaataaactatattcaGCTCTGCTTGCAGCTCTActctacca
tttttgttttgatttaacttgtattttaatgaccagacgggtcatttatt
tgagggctatgcatgttagcctcaactgatgcaagttacccactctcacg
gtacCTTTTAGTAAATTAAAGATCAGTCCTATATTCAtgtactttaaatc
gcttggggagtcacaattATCCATTTGACAGTAATGCAGGgctaaaattt
tgtgaaatcaCACTATTTCGCGAAATTAATTcgttttcatttttaacatt
AATTTATTCTACATTTATCAtctaattttcattaatttttttatattttt
agtagTTTCTCTGCTAAGTTGATTAATGGAGGCATAGCTGGTTCAATTGG
TACATGTTGTGTTTTCCCACTTGACTTAGCCAAAACAAGAATTCAAGATC
AAAGAACATTCTCAAAAACAACTGGACAGGCTGCGACAAGACTCTATAAA
AATGTGTAAGTGATTTTTCTCATTGTTTCTTTTCTACGTATGAAAAATTA
GTTTTGAGTCATAAATGCTCCCATTTTCTAGTTTAttctccaaaaataaa
aataacggacaaaAATAATTTCCTTATTTTTAGCTTCCATTGCATGTACA
TTGTTGGAAAAACTGAGGGAGTCAGAGGGCTCTACAAAGGTATATTTATA
TTCATATTTATATTTAATCCATTTTGAATTATAAATGTCGTAGACAATGG
GGTTACGATAACAGAACGTTCCCCTCTATCTATGGAAAGAGAACCTGGAA
AAActttgtcaaaattttaaacataactttttttctatcatTTTCAGGGC
TTGGTATTAACTTATTCCTTGTAAATCCTGAGAAGGCAATTAAATTAGCT
GTGAATGACCAATGCAGACAACACCTGGGATCAAAACAAGGGTaagaaaa
atgactttttctatACTTTCATTTGAAAGTCTTATTTCCATCAGAATGAA
ACATAAatttcatcagattttaaaacagttttcattatatttgattTTTG
TAGATCTATGTTACCTTTACGGTATGAAGCTATGGCAGGTGGCTTAGCTG
GAATGTGCCAGGTAATAATTCTAAAAACTAaatactttctttaaaaaaat
aaacacttaatttattttttattttttaacaaatttcttTGTCCTTCTTT
TGCTCttacaatgtttttttttaattttcttatagATTTTTATAACAACA
CCAATGGAATTCTTAAAAATACAAATGCAAGTTGCTGGACGAAGtaagga
aaaattatttttaatgggTGCTACCAGGATTTGTAGCTGttctttgaatt
ttgatttcctTCACAATATCTACTCTAAAAAGTCGATCAGCATGGGTGAG
AGATTGCATTAAGGAAAAATTATGAATGAGATCCTGACGACTAGAATGCA
TGGGATtataaattgttaaaaaaagtagtcttttacatttttaaataaat
ttataaggAGGCACATTGACAGATCTCATGATGGTCAGTACTCTATTAAT
AATGCAGTAGCATCagtgttgttttgatttagaAATTCTCACCCACCTTA
TCAATTAttgattttttcttaatttattttctcaatacattttttaagaa
tttatctttttcttaaaacaatAGATGCTGAGTCTGCACAAACAAGTGCT
GTCAAGGTAGCAGTTAATCTTATGCGACAAAGAGGAATTGCTGGTATTTA
CAAAGGAACTGGTGCTACATTTATAAGGTTGCTTGTTATTCCTTTGACAT
TAtgactttttcataatttttagatcgcagctttccgaaaaaaaatgtgC
ATTTTGAGGAACAGCTAAAGATGAGCTCCCCTTTAATTGATTGAAATCAT
TATGCCATAAACATCCTTTGTCTTGAACCATTACCCGATTACATAGAGAT
TGCAACTCTGCAATTACACTTCCTTTTAATTCTTAAATAGACGTCATTTA
CAGACGATTACATTGTAACAATTTGAAATGTTTCTGAAATCATTCAAAGG
ctattacaatataattttgataTCTTTCAATTTGTAATACTCTTGTTATA
GAGGTGCGCAACTGAAATACCTTTAAAATCATTCGAAAAATTATTCCCAt
cttttttgacgaattttttatttcatttctttataGGGATGTACCATTCT
CCTGCGTCTATTTCCCATTATTCTCATACTTAAACTCACTGGTGAGTAAA
AAGTTGTACTTtgactttgtttttgtttatcttggAACACAATACAATCA
AGTCTTGTTCTACAGGAATCCTAAACTCATTCAAAACCGGTTTTTGAATG
CAAAGAATACAGAGTGCAGAGCACCTAAGTTAGCTGTCATGTTGTTGTGT
ACATAACTTTGAGATTTATTCCTTCCTGTCTCGTAACTTccttatttgtt
tttttcatgtAACTTTTTGCTCATGTGGTTTAAGAGTCGCTTACAATCAC
AGTCATAAATATCAACACTTAGAAACCTAAACTTTGTACCTAGCTAAGAG
ATATTACTCTACTTTTTTTTCAGGGATACAAAGATGGTCGAAAGCCACAT
CCTGTTCATTCACTGGCTTCAGGGTTAGGATCTGGCGTATTTAGCGCTGT
CCTTGTTACTCCTATGGATGTTGTCAAAACGCGATTACAAGTCTTGAAAC
GTATGGAAGGAGAACCTATCTATAACGGCTGGTCCGATGCTGTCAGTAAA
ATATACAGAAACGAGGGTCTATCTGCATTCTTCAAAGGAGCTATCACACG
TGCCATTGTGGTGGCGCCCTTGTTTGGAATAGCTCAAATGGTTTATTTTG
TTGGTTTTGCAGAGACTATTATGGAGCGTGCATCTCAACAAAGgatcaaa
gatttttcttgaaatcgaaaaatatttatccccTCGAAAGAATTCCTAAA
CGACTCAAATTTCTTTAACTATAGTTCTAAAAACGAGAATCTTCTGCCCC
ACAATCTTCAAAGGATAACtaatttctttttagtttaTGTTACGTCTCGA
CAGTTgtcaaattaaaaatgaaatgatCGGTACCTTCATGCGAGAGCATT
GTTGATTTACAATCCCCTCGAAGAGAAACCCTTagttgtttttaatcaat
tactttttatattttaatatGTCATATACTTTAAGTAGATAAAATCGCTC
ACGACAATGTTAAAAATAATAgagtttttcataaaaatattgtTAATATA
TTATAGAAAATTACAATCTATAAAGGCTTTGTATCATaagaattcaaaat
atttttactttatcgTTTtacatatacagattttttacGTAAAGGTTGAT
TAATggtgtgtttttttcttttttttcttttgtataatttttttagtagt
gtataatatttatttggcattttattttttaaacacaCCATTAGCAACTC
TCGGAAATGAtcataattagaaatttctgtAAGGATTATAataagttttg
acattttctcgtaACGCTTACCAGGAAATCaaggaattttcaaaatgaga
ttcAAAAATTATTCTGGTTTTCTACTAGTGAACAATTATTGCTCGTTCGT
AATGCTTTAAGTGAATAGCATTACTGGTAAGCTTTTGGAGCTCACACGAT
TGAAAGCTTTTACTCTGAGAATTCGCCACCCACGCCGAgagtaaaaatat
tgaaaagtgaAACAGATTTATTTGGTCAGCTTAACACTGTCAAGATTCAA
AATTGACCCCGTCTGTTTAAATAGATTTTGAGATTCCTTTCAAAACATAC
CTCGGATTGCAAAACTATGAAAATTTAGTgttattttgattgtttcaata
gACGATGGAAATCAACATTTTTTCTANACTATGAaaatttagtgtttttt
ttattgtttcaatagACGATGGAAATCAacattttttctattattttatc
ACATAttgcaaaatttgttttatactGAATTTGTTTAATGAACTATCCCA
ATTTTTTGGTAcagtatttgatttttttaagcca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000965XLOC_000965Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001797-exon-sc0000012-1491911889:652657..653208TCONS_00001797-exon-sc0000012-1491911889:652657..653208Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1510915933:652657..653208TCONS_00001797-exon-sc0000012-1510915933:652657..653208Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1575043694:652657..653208TCONS_00001797-exon-sc0000012-1575043694:652657..653208Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1491911889:657647..657796TCONS_00001797-exon-sc0000012-1491911889:657647..657796Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1510915933:657647..657796TCONS_00001797-exon-sc0000012-1510915933:657647..657796Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1575043694:657647..657796TCONS_00001797-exon-sc0000012-1575043694:657647..657796Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1491911889:658501..658549TCONS_00001797-exon-sc0000012-1491911889:658501..658549Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1510915933:658501..658549TCONS_00001797-exon-sc0000012-1510915933:658501..658549Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1575043694:658501..658549TCONS_00001797-exon-sc0000012-1575043694:658501..658549Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1491911889:659709..659861TCONS_00001797-exon-sc0000012-1491911889:659709..659861Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1510915933:659709..659861TCONS_00001797-exon-sc0000012-1510915933:659709..659861Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1575043694:659709..659861TCONS_00001797-exon-sc0000012-1575043694:659709..659861Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1491911889:659990..660045TCONS_00001797-exon-sc0000012-1491911889:659990..660045Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1510915933:659990..660045TCONS_00001797-exon-sc0000012-1510915933:659990..660045Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1575043694:659990..660045TCONS_00001797-exon-sc0000012-1575043694:659990..660045Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1491911889:660204..660297TCONS_00001797-exon-sc0000012-1491911889:660204..660297Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1510915933:660204..660297TCONS_00001797-exon-sc0000012-1510915933:660204..660297Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1575043694:660204..660297TCONS_00001797-exon-sc0000012-1575043694:660204..660297Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1491911889:660410..660467TCONS_00001797-exon-sc0000012-1491911889:660410..660467Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1510915933:660410..660467TCONS_00001797-exon-sc0000012-1510915933:660410..660467Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1575043694:660410..660467TCONS_00001797-exon-sc0000012-1575043694:660410..660467Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1491911889:660592..660649TCONS_00001797-exon-sc0000012-1491911889:660592..660649Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1510915933:660592..660649TCONS_00001797-exon-sc0000012-1510915933:660592..660649Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1575043694:660592..660649TCONS_00001797-exon-sc0000012-1575043694:660592..660649Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1491911889:661031..661133TCONS_00001797-exon-sc0000012-1491911889:661031..661133Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1510915933:661031..661133TCONS_00001797-exon-sc0000012-1510915933:661031..661133Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1575043694:661031..661133TCONS_00001797-exon-sc0000012-1575043694:661031..661133Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1491911889:661543..661597TCONS_00001797-exon-sc0000012-1491911889:661543..661597Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1510915933:661543..661597TCONS_00001797-exon-sc0000012-1510915933:661543..661597Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1575043694:661543..661597TCONS_00001797-exon-sc0000012-1575043694:661543..661597Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1491911889:661930..663390TCONS_00001797-exon-sc0000012-1491911889:661930..663390Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1510915933:661930..663390TCONS_00001797-exon-sc0000012-1510915933:661930..663390Clytia hemisphaericaexon
TCONS_00001797-exon-sc0000012-1575043694:661930..663390TCONS_00001797-exon-sc0000012-1575043694:661930..663390Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:652657..663390 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.874557	1.00035	2.53917	0.108643	4.2518	4.0477	2.29242	2.18176	1.81799	2.49039	0.995615	1.22542	0.660963	1.5824	1.86423	1.74645	0.778691	0.340832	0.530216	0.872939	0.00688353	0.00010395	0.94713	1.33446	0.676255	0.742197	2.36469	1.45494	0.755533	2.09857
Blast
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BLAST of TCONS_00001797 vs. Swiss-Prot (Human)
Match: GHC2 (Mitochondrial glutamate carrier 2 OS=Homo sapiens GN=SLC25A18 PE=1 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 1.574e-83
Identity = 150/316 (47.47%), Postives = 200/316 (63.29%), Query Frame = 3 
Query:  753 SFSAKLINGGIAGSIGTCCVFPLDLAKTRIQDQRTFSKTTGQAATRLYKNVFHCMYIVGKTEGVRGLYKGLGINLFLVNPEKAIKLAVNDQCRQHLGSKQGSMLPLRYEAMAGGLAGMCQIFITTPMEFLKIQMQVAGRNAESAQ----------------------TSAVKVAVNLMRQRGIAGIYKGTGATFIRDVPFSCVYFPLFSYLNSLGYKD-GRKPHPVHSLASGLGSGVFSAVLVTPMDVVKTRLQVLKRMEGEPIYNGWSDAVSKIYRNEGLSAFFKGAITRAIVVAPLFGIAQMVYFVGFAETIME 1631
            S +AKLINGG+AG +G  CVFP+DLAKTR+Q+Q       G+A   +YK +  C+    + EG  G+Y+G  +NL LV PEKAIKLA ND  R+ L  + G    L+ E +AG  AGMCQ+ +T PME LKIQ+Q AGR A   Q                       SA  +A  L+R +G+AG+Y+G GAT +RD+PFS +YFPLF+ LN+LG+ +   K    HS  SG  +G  +AV VTP+DV+KTR+Q LK+  GE +Y+G +D   K++  EG SAF KGA  RA+V+APLFGIAQ VYF+G  E I++
Sbjct:    7 SITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQH------GKA---MYKGMIDCLMKTARAEGFFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLL-MEDGMQRNLKMEMLAGCGAGMCQVVVTCPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLAGLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVTPLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQGVYFIGIGERILK 312
The following BLAST results are available for this feature:
BLAST of TCONS_00001797 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GHC21.574e-8347.47Mitochondrial glutamate carrier 2 OS=Homo sapiens ... [more]
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