TCONS_00002040 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002040
Unique NameTCONS_00002040
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3041

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002040 ID=TCONS_00002040|Name=TCONS_00002040|organism=Clytia hemisphaerica|type=transcript|length=3041bp
TTCCTTGAAATTGTGGATCTAGGGCTAAACCTCACGTTTGTTTATCTTTA
cagaagaaaaactaaaatgaCAAAGAAATACAAAATAATATAACAAAAAA
TAGCGTTTTGATGCACACGACTAAAGAAAGATGGCATTTGTTGAAGGTTA
TGACGTGGAAACAGTGCAAGATATTTCATCCGATTTATTTTGCGTCATTT
GTTTGAAATTGATGAGAAATCCTGTTCAATTCAAGTGTGGCCATGGAATG
TGCTTTGTATGCTTCAAAAGCTTGCTACACCGCTCTAAACAAAAAGCCAC
AACACAATGTCCACAATGTCGTGAAGTTGTCAAAGAAGGACAGATTGTAT
CAAACGTGATGTTGCACCGCATTATACTTTCATTGCATGTGCTATGTGGT
AACCATGACAACGGATGTAAATGGACCGGTGAATTGGATCGATTTGATGA
GCATTTCGCGCAATGTACGAAACACTCAGAAAATGCAGCaaacaaaaagt
ccaaaaagaaaaagAAAAGAGCAGATCAAAATCAACAAGCACCACAAAAC
ATCCAGAACGAGCTTCTCCTGCAAATCACTGAACAGCTCTCAAACCTTAA
AGAATACATTATCAGCCCGAACGCAACTAAAACGCAAGACTCGGACCCAA
ACTCCACGGACGCCGCGATGAAACCACCGTTCTGGACTAGATTTAACAAT
AAAAGTGTCACGTCTAGTCGCAAAACTAAAACATTAGCCTTGATCCTTTT
CACTATATCCTTATTGTCTGGAATGCATATACTGGGCGGAGGCTTCTCTG
ATTGGTTCATGGACGAAGACGCAACAGCCAATCAAACGCCTGGAATCGAT
CACGTGGCAACATACCAGCAAGTCCATAGCGAACTGGCAAAAATGAATTC
CCTAATATACGcacagcaaaacaatttttttcaactccATCTCGGCTCCA
AGGAGCTACAATCGGACCTGGAAGCACAGAAAACGGCGACACTCAGGCTA
ACGGGTTTATACTTGAAGAATAGCCTGAACGCGGCACATTTCACTAAGAC
CTCCATCGCAGATGATGTGGATGATGTGTTTTCACAAGAGATGATGCACC
GTAAATTAGGACTGGAACGAACGGCCGGTTTCCAATTGGTCAACATGAAG
GAAGATGCTTACGCAAGGTTGAAATCACTACAAAACCAATCGCTGGCCAC
ACTGACTGTATTTAACGCTACCGATTTTTTAACAccttttttgaaagatt
gtAAAGCATTCCAACGTGATTTCGCACAACAAATTATTATTGCCTTGACA
ACCAGTGAAAACTTAGTTACGCATTCTTTTCAACAAGCTAGACGCAAGAT
GGCGTTTTACGTTGCTAAGGAGAGCGATTTCACTGGATTTGATTATGAAG
ATGTTAAGAAACATTTAGTGGAAGAACGCGAGAAAAGTGACGTCATCTTA
CGTGAGAAATTAAACGAGGCAAAACAAGAGGAATATGTTCGAATGTTGAG
ACAAGAATACAATGCGTTAAATCAAACGTACCATGAAAtgttattaaaat
caatttcacAGTACGAGTTGGACGCGTCTTATCAAAATCGAGCAGCTTTC
GTTTTTAGCCAacttgaaaatgttgattttggaAACGGACGTTACTTGTG
GAGAATGAACAGCTCCCTGTTACCTCTATTACCAACTGGACATGGGTACT
ATTCAGAGAAATTCACCACCATTGAGGCTAAAGCACCGAACCAAGTTGTC
ACCTATGCTAAATTATGGTTATTACGTACGTCGGTTCAAGATAACACATG
GAAAGTGACATATGAGCAGTACGGTGATTCTCCAGTGAGAATGAAAGTTT
TAGTTGTTAATCAGAAGATGGATAAGGATTTAGAATGTGTGGAATCGTTT
CGCCAGACGAATGAAAAAGATGAGCTGATTATCGATTTTGATATTCCCTT
CAGTTTTGAAGTTTTGGAAGAGAATGGTTATATTGTAGATGAGAAGATTT
TGGTCAAAGCATATGTTGTATAGGATATACTAACTGATTGGCTAAGCCAG
ATTGATTCTGTCACTtggtaaaatctgatggtaagttgtgactgaatatc
tagtttttcaaggcaaaatTAAAATTCCGTACATCATACAAATCATTAAA
GCACCGATAACGCTATATTGCCGTCAGCCGTATCTTGGCCTTGTAAAAAC
TGGTTTGGCTATCCAGGCTACTGGTTGGTTTCGTTGTCATTCCAAGGGTG
ATTGATTATACTTTAAGGGCCGAAAGTGTTCCGCTAaaaatttccctaaa
ttttacattttacgaGATTTtaacatagatttataaagcccgaagggcta
gatggtgTGCcttaagaaaaaagtgaatatcgcaaaaaatattgctgcta
ttgttttcgaaaacccgcgaagcttctgattggtcaagcgctgaaattct
attgtaatgaattaggtaggatttcctacctaacctcggcacacttttca
gacgatatctagctcttcgggctttataaatctatgaatTTTACACATAG
AACTTTcgcaaaatcaaaatcatcattttcaatcaaaatcaaaagatttc
tttttacAGTAATATTTTTCTTAACATCTTCGAACCAAAATATAGTTTTA
TAtcctttttatagatttttatatagcattattttatagatttttttaga
aatagaTTTTATCCAGATTTTATTAGATTCATCCTATAATAATAGAATTA
agtatatttcaaattattcgtGATATACCAAAAAACAGCACTCAATTTTC
TTGCCtttttgaaagttattttttcattaGACCTATTACAATATCAACGG
TGCCACCTCGTTTTTGGCCTCCTGTAGTACAGAATCAcgaatattattat
atactaCCATATTGTTGTTATTATATATACTTGATatataatcaaatttt
tattatatcaaaaatatatttagtcAGTCTCAGTCTTCCCCTCATTGTTT
CCCCTCGAAATATGTTATCATTACGTCATATCACGTCATCG
Run BLAST on NCBI

protein sequence of TCONS_00002040-protein

>TCONS_00002040-protein ID=TCONS_00002040-protein|Name=TCONS_00002040-protein|organism=Clytia hemisphaerica|type=polypeptide|length=630bp
MAFVEGYDVETVQDISSDLFCVICLKLMRNPVQFKCGHGMCFVCFKSLLH
RSKQKATTQCPQCREVVKEGQIVSNVMLHRIILSLHVLCGNHDNGCKWTG
ELDRFDEHFAQCTKHSENAANKKSKKKKKRADQNQQAPQNIQNELLLQIT
EQLSNLKEYIISPNATKTQDSDPNSTDAAMKPPFWTRFNNKSVTSSRKTK
TLALILFTISLLSGMHILGGGFSDWFMDEDATANQTPGIDHVATYQQVHS
ELAKMNSLIYAQQNNFFQLHLGSKELQSDLEAQKTATLRLTGLYLKNSLN
AAHFTKTSIADDVDDVFSQEMMHRKLGLERTAGFQLVNMKEDAYARLKSL
QNQSLATLTVFNATDFLTPFLKDCKAFQRDFAQQIIIALTTSENLVTHSF
QQARRKMAFYVAKESDFTGFDYEDVKKHLVEEREKSDVILREKLNEAKQE
EYVRMLRQEYNALNQTYHEMLLKSISQYELDASYQNRAAFVFSQLENVDF
GNGRYLWRMNSSLLPLLPTGHGYYSEKFTTIEAKAPNQVVTYAKLWLLRT
SVQDNTWKVTYEQYGDSPVRMKVLVVNQKMDKDLECVESFRQTNEKDELI
IDFDIPFSFEVLEENGYIVDEKILVKAYVV
Run BLAST on NCBI

transcript from alignment at sc0000018:416919..433182+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002040 ID=TCONS_00002040|Name=TCONS_00002040|organism=Clytia hemisphaerica|type=transcript|length=16264bp|location=Sequence derived from alignment at sc0000018:416919..433182+ (Clytia hemisphaerica)
TTCCTTGAAATTGTGGATCTAGGGCTAAACCTCACGTTTGTTTATCTTTA cagaagaaaaactaaaatgaCAAAGAAATACAAAATAATATAACAAAAAA TAGCGTTTTGATGCACACGACTAAAGAAAGATGGCATTTGTTGAAGGTTA TGACGTGGAAACAGTGCAAGATATTTCATCCGATTTATTTTGCGTCATTT GTTTGAAATTGATGAGAAATCCTGTTCAATTCAAGTGTGGCCATGGAATG TGCTTTGTATGCTTCAAAAGCTTGCTACACCGCTCTAAACAAAAGTAAgt catattcatgatattcatgacataatcttttatacggaagcatcTTAAAT GACCCGGGCGTTATGAATACAGTGGagtccataactcgaacacgcacgag gAAATTTTGGAGTTAcggaaatttcgagttacggAGTAAGGTACATAAGG GACCATTAAACTTGTTCTAGTTAAGGTGGCATTCGAGTGGTAGAGGTTCG AGATAAAGAGACACCACTGTATCACTATAGACATGGAAACTTCAGCTGTT ATTGGATGGCTTATGTTTAAGTATTAGAAACTGAAGAGATTTAACTCCAA AAGCTTGACAATTACTTGACAAAAGTTATACCTCTATACTATCCTCTATC TATTATAAGTAACGTTAAGCACAAACATTTTTTAGATGTTAGTAGTTTGC CAAACATTCATTATTTGAGTTATCTGgtacacgtttgttttttataagaa catccaatttttttgcctcttaactttttgagttttaagcctaaaatgtt cttaacatgttcttaatttcaccattttgtgagtattttggtccattttc ctaatAAATTTCATTCAATATTCACAGAGCCACAACACAATGTCCACAAT GTCGTGAAGTTGTCAAAGAAGGACAGGTTTGTTTGTGCTGAAGCTCCATT ATTGAgctatttcataaaaaagaattttccccAACCTCTCTGTACAGAGT GTCCTTAAAAcctgggaaaattttggagagtTGAAATTGTCGGGGAGCAG AATTCAATATCTCGAGTTAGAAGcgtttttgcttaaccctaaaaaagaat ggggttgttatataccgttggaacggaaattttatgctgattatggaaac ccaggtcttaaaaagtctatcctggacgattttgaaaacgaggctggagt ttgcactcctccgtggtgttttttcgattttacctgttttagaaaaatgc tgactgtcagcaaagtaaaggtttttagaatttaattttttttgaaaatt gctagcaatagaattgccttttaaacaaaaaattcaaaatttttgaaaaa aacattttttgcactccttcttggaggttttttgcaaaaatcagcgtttt tacaaaaatatactgctaAAACAAGTNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACCGTTGAGAATTTCT TAGCAGGTGGGGAGCTTGAAGGGGCTAAGTGCTAACGGGAATGgcaaatc tctttttttatcATCGAGATGGTTTTTTAGTCCACTTCTTTCAATTGATA TGAGTTCTGGGGTTATACGTTTATGTGTTTTTACAATACCTTGCATCTGT GGTACATCACATCACATCCTGTCTGTAGAACTGGCCCTTAAACCCTTTAG GTAGATCTCCTATTTGACGATGGATTAGGTTAAAAGGTTTGTTTACCAGG TCAAACtaagaggcccccagcggaccAAAAAtacacgcattcacgcaagt ttttctcaaattcatgCAAACCCAATtatttgggaaatcggggaaatttt cggaaaaaattaGGGAAATTGTCAAAGATAGGGGAAATTTGCACAAATTT GGGTGAGAAGGAAAActtcacgcgttcacgcaaaaaacagggcagattca cgcattcacgcaataaaaaatggattttcacgcattaacacaaaccgctg ggggcccaaCTAAGTAATAGTAANNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT CACACATTGGTTTGTTTTATTACAAGATACAGATATTACAgatatgcaac aatagtgacatTTTCAATCATACCCAAACATTTCCTCTTTCCAAGATCTT TATATCTTTATAACTCTTATATCTTGGATGATTGATGATTAAACTACTAT TTCAGACAGACTATTCCACTGTTTGATGCCTCGACATTAAAGAGAGTTGC TATAGGGTCCACGATCACCATAACTTTCGAAAACTTTTACCAGTTCAGAG CTGTGTTCTCAGGTCTTATGTATTTGTTggttaaattttttagaaacaca TGATTTGTTGTCATAGTGATTCAAAAGTTTGAAGATCTCAACTGTATCAT AAAGCAAGCCTATATTTCAGACTTGGGATTCCGATTCTTTGTAATCCAAT CATCAATTCAATTACAGAACAGATACCATCGTTAAGTCGCCTTTAAATGA TACAGATGCCTTCGATAAAAGTGCGCTGGCACCTTTTCTATTAAACTGTC GCTAGACTATGTATTGAAGACTTCACTCAACCGCCACAAACATACGGTGT AATAGAGGCGTAGCCACGAGTTTTCGTTTCGGGGGGCGAGATTGGAAAAA CTTTCGCCTTTTTTAGAGGAAATTTATGCGCCGCAGGCGTAAATCTTTGC TGTAAGCAAGTTCAAATAGCTTAACAAATGGCATTGGAAATCTCAAAGTT AGTGAGAATAAGGtcataaaaagtgtaaaaaacgtaaaagaaAACTTCTA AGAAATGTCAAGCAGCTTAAAGGATGCCTTAAAAAGGTCAGATGTAGCCA GAGAAAGGTTACAAAAACTACAGAACCCTTCGCATTCTattgggaaaact ttgacctttttggtcaatttttattttttttgggaGAANNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGCAATTCTATTggtagcaa ttttcaaaaaaaattaaattctaaaaacctttactttgctgacagtcagc atttttctaaaacaggtaaaatcgaaaaaacactacggaggagtgcaaac tccagcctcgttttcaaaatcgtccaggatagactttttaagacctgggt ttccataatcagcataaaatttccattccaacggtatataacaaccccat tcttttttagggttaagcaaaaatgccatttttggatTCTGCTCCCCGAC TATTATCTCATTTTATAGTTGCAAATGGAGGCAATTAGATTagactttcc tttttttcaaactgCTTTTAGAATTTGTTATTagaattcatttcaatttc aaaacaattttactGTACTGAGGATAGTTCTCTGTTAAGGACCGAAACAT CTAtgtaataaatttaaaaaattaaaaaaattgaacgaTAAGAAACTTCT GTTCTATTGACGAACTTTATGATTAAGGAATATGAAAGGATTAACCTGTT TAATCGAGAAtagtttgaattatagaaactTTCCATGGCTGAAAGATTCC AATGAATTAGGTTCTAATTGGAGGTAGTTTGACTTTTGAAGATGTCCCAT ACGATCATAGCGGTTGAGAATCAAGACGGGAAAGCCTAATTAGACATGGC CCCCTGCGTGCGAATCaaattgagggggccaaaaagTGTGtcggcgacga agaaaattttcgacttatCACCCTTATTTCatccctctaaacggtatata taagattttttaaagtaaaaaaaattgctttgcaaaatattggtgACGGG GGCCATGTTAGAACCTAATTCATTGGAATCTTTCAGCCTGGAAAGTCTCT ATAATTCAAATTATTCTCGATTAAACATGAAAGATGTTCTATTCTAAATT TTAGATTGTATCAAACGTGATGTTGCACCGCATTATACTTTCATTGCATG TGCTATGTGGTAACCATGACAACGGATGTAAATGGACCGGTGAATTGGAT CGATTTGATGTAACATtactgtttgtttttattattacaTTGTAACAGTG GAACTagccggtggaacttttttcctcagtgggaataaaaactcctattg aaatcccaacggggatcgaaattctattgttccaaggctcaaaattcagt ggggatggttttaaaGTGCAATtcttaaacattgaatttccgatggggat gaaatttcaaagtattttcccaccgggaacgaaattttcgccaaattttc cagtggggctggggtcccagtgggtgtgtgacacaggggtgtattataaT AATGACCAATAAACAAGGATTTCAAATTCAATATCTGCCAACCAAAATTT CGTAAGTTTGCTAATTGCTAACCCTTGGACCATTTAGTACATCGAACTGT GTGGATATCTTTTCCTATTGACTTGTATAAAGAGTTGATTCCCTTTACAT AGCCTGACATAATGCAGTGTTCAAAGTTCTCTCGCCTCAAAGAAGTTAAA AAAAAGAGTAATTTTCGTCTCAAAACACTATCAAAATAAGCGAAATTTAA AGAATCTCGCCTAACTTTCTGTCCAACACGAGAATCGCTGCTTTAACCAC TGAAAATGACGTACCTAGACACATCAAACAGGAAACACCTTTGGAAGGAA TCTACTGATCGAATACGTGtaactttttatattttttttactgTTCACAG GAGCATTTCGCGCAATGTACGAAACACTCAGAAAATGCAGCaaacaaaaa gtccaaaaagaaaaaggtttgttAATTCGAAGAAACGTTTCCTCTAAAAG ACGACCAGTTTTAAATGGAAGACTCCTAATTCCACTTTTGCTtttaactt tctttttgcaCCCAGTGTCACAAATTACATAAAATAAGTAATGAATattt ttgctccggcctaggagcctttaattctctcttccgacaacgaCGGTCAA Taaggtcaagacatttttttttgtttatctaatccgatgatctattccga tttaataaaaacggattttctggatttcgataatattgcGAAAGTATNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaatggaatgaaactttcaa acacacatccattggaattcgaaagagaatactaaaattacaacattaca gtgcaaatttgaaaacgatctgagcagtttttgtcgtgttatgtgtatgg ctgGCTGAatatgatcctgttttgtattcataattatttgggcgaccgtt ccttttgatttttcaaacccgacacagatattttacaaacatatcactat gagaattcaataacggatactaaaacacaattcctgtgtNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNa cagtgttataactgaaaatgatattttttggactttgttgtaatttcatt ggctggggcgaccgttccttttgaagatttttcaaacccgaaacaggttt tttacaaacatatcaatatgagaattcagtaaaggatacaaaaaaaaaca attcctgtgtaaatttgaacaagattggagaaattttcacagtatggctg aaaatgatcgtttttggacttggtCTTAATTTCATCACTGCtagcgaccg ttccttttgatttttcaaacccgacacagattttttacaaacatatcact atgagaattcagtaaaggatactaaaacacaattcctgtgtaaatttgaa caagaccGGAGGAatcttcacagtgttataactgaaagtgatattttttg gactttgtcgtaatttcattggctggggcgaccgttccttttgaagattt ttcaaacccgaaacaggttttttacaaacatatcactatgagaattcagt aaaggatacaaaaaaacaattcctgtgtaaatttgaacaagattggagaa attttcacagtattatggctgaaaatgattgtttttggaCTTGGTCTTAA TTTCATCGCGGCTGGCGACCGTTCCTTTGATTTTTcaaacccgacacaga ttttttacaaacatatcactatgagaattcagtaaaggatactaaaacac aattcctgtgaaaatttgaacaagatcggagaaatcttcacagtgttata actgaaaattatattttttggactttgtcgtaatttcattggctggggcg accgttcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatttattcgttaaga ttatttctcatactcgctctgcaatagaattattactttgctttctgatc tgttctgattagcagtttgtgggcaagctcatctttcacatcttttaatc tcttaagccggagcttccagcgcagctggtttatttagaATGTATTCCat ttgaatattttaagcttcatATATACCCTTGCTCTTTTGTCGGCTTAAAC ATAAACTCTATTacttattttaagatttttgttgtTCATTCAGAAAAGAG CAGATCAAAATCAACAAGCACCACAAAACATCCAGAACGAGCTTCTCCTG CAAATCACTGAACAGCTCTCAAACCTTAAAGAATACATTATCAGCCCGAA CGCAACTAAAACGCAAGACTCGGACCCAAACTCCACGGACGCCGCGATGA AACCACCGTTCTGGACTAGATTTAACAATAAAAGTGTCACGTCTAGTCGC AAAACTAAAACATTAGCCTTGATCCTTTTCACTATATCCTTATTGTCTGG AATGCATATACTGGGCGGAGGCTTCTCTGATTGGTTCATGGACGAAGACG CAACAGCCAATCAAACGCCTGGAATCGATCACGTGGCAACATACCAGCAA GTCCATAGCGAACTGGCAAAAATGAATTCCCTAATATACGcacagcaaaa caatttttttcaactccATCTCGGCTCCAAGGAGCTACAATCGGACCTGG AAGCACAGAAAACGGCGACACTCAGGCTAACGGGTTTATACTTGAAGAAT AGCCTGAACGCGGCACATTTCACTAAGACCTCCATCGCAGATGATGTGGA TGATGTGTTTTCACAAGAGATGATGCACCGTAAATTAGGACTGGAACGAA CGGCCGGTTTCCAATTGGTCAACATGAAGGAAGATGCTTACGCAAGGtaa ctttatattttttgtttttctttagccAGTTAATTTGGTAGCGGATAGAT TCACTCCTGGCTCAGTTTActgccaccagatgaatatacttattttcttt acttcatttGGTACAGAGGCATGGCGAATACTTAACAGCTCATAATTGTT TAATATTACTTTTCTTGCACTACCTTTTGcatctttttgttgaaaaagat tCAGAAAGGGTTTTAACTTTCCAAAATTTTTACTGGCATTATGAAggcaa tttttaaaaaacttattaGCATGCTGTCAATATTACCTTATCTGACTTTG AATAAGTTACGCTTTTATAGTGAGGAGCGAAGAGTTTATATAAAAGTGTA AAATCCTTTATCTCGTAAAAATGATGCCTTGATTAGTTTTGTCAAATAGT GGCTCAATCTTAGTGCAAAAGAGTCTCCATAGCTATCGCTATAAGGAATA GAGACTTGTTTACTAAGGGACCAAAAAACTGTTCGAGCCAACGAGACATT Gaacagttattggacaaagttgaatccaatatgcaaaaatattgggcgtg cgaGAACGCTAAGATATTACTCGTTTTCCAGCATAATGCCAACTTATAAG GTCATAAATCGAGATTATTGgtagttttttttcgaaatgatGAGTTtcta ttttgtgacgtaacgtcaaaaagaagatgctcaattaTCATTGAACTCGT Tgcatgacgtcaatttttgaaatatatagcctccataggccatttcacag ttgaaatggatcatgggtaatcaggactgattgcgccccgATAACGGTTT CCCGTTGGTTATAcggaaaaaatcttcaaaattttgttcaaaactttgga ccaataataagtcgtcattagcgcgcaatggtcctgattacccattacgc tttgcgactgtgaaatggcctatggaagctatatattcgaaaggttctag gaaaattgcccccgagaaaattgccccccggaaaactgcccccggaaaat tgccccccggaaaattgccccctaggaaaactgCCCCCTNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Ntggggggcaattttcctagggggcaattttccggggggccgttttccgg ggggcaattttccggggggcagttttccggggggcagttttccggggggc agttttctcgggggcaattttcctgacaccatattcgaaaatattgcaca gcaaagaagccaatcaaatgtcgctatttacgcgtGTCGGATAATAACCA AGATAAAGAGGCTCTAGATATGAAGATTGTGTAGCTCTTTTTACCCAAGC TTGTTTGATAGATAATGTTCTGcactttgaaatttcaaataactTGATAA ctcagttttattttttttatttcgctACGAAACAGAATATTAAATATATA GAGATACGGTACACAAGctcttcttttttatatttccaAGGTTGAAATCA CTACAAAACCAATCGCTGGCCACACTGACTGTATTTAACGCTACCGATTT TTTAACAccttttttgaaagattgtAAAGCATTCCAACGTGATTTCGCAC AACAAATTATTATTGCCTTGACAACCAGTGAAAACTTAGTTACGCATTCT TTTCAACAAGCTAGACGCAAGATGGCGTTTTACGTTGCTAAGGAGAGCGA TTTCACTGGATTTGATTATGAAGATGTTAAGAAACATTTAGTGGAAGAAC GCGAGAAAAGTGACGTCATCTTACGTGAGAAATTAAACGAGGCAAAACAA GAGGAATATGTTCGAATGTTGAGACAAGAATACAATGCGTTAAATCAAAC GTACCATGAAAtgttattaaaatcaatttcacAGTACGAGTTGGACGCGT CTTATCAAAATCGAGCAGCTTTCGTTTTTAGCCAacttgaaaatgttgat tttggaAACGGACGTTACTTGTGGAGAATGAACAGCTCCCTGTTACCTCT ATTACCAACTGGACATGGGTACTATTCAGAGAAATTCACCACCATTGAGG CTAAAGCACCGAACCAAGTTGTCACCTATGCTAAATTATGGTTATTACGT ACGTCGGTTCAAGATAACACATGGAAAGTGACATATGAGCAGTACGGTGA TTCTCCAGTGAGAATGAAAGTTTTAGTTGTTAATCAGAAGATGGATAAGG ATTTAGAATGTGTGGAATCGTTTCGCCAGACGAATGAAAAAGATGAGCTG ATTATCGATTTTGATATTCCCTTCAGTTTTGAAGTTTTGGAAGAGAATGG TTATATTGTAGATGAGAAGATTTTGGTCAAAGCATATGTTGTATAGGATA TACTAACTGATTGGCTAAGCCAGATTGATTCTGTCACTtggtaaaatctg atggtaagttgtgactgaatatctagtttttcaaggcaaaatTAAAATTC CGTACATCATACAAATCATTAAAGCACCGATAACGCTATATTGCCGTCAG CCGTATCTTGGCCTTGTAAAAACTGGTTTGGCTATCCAGGCTACTGGTTG GTTTCGTTGTCATTCCAAGGGTGATTGATTATACTTTAAGGGCCGAAAGT GTTCCGCTAaaaatttccctaaattttacattttacgaGATTTtaacata gatttataaagcccgaagggctagatggtgTGCcttaagaaaaaagtgaa tatcgcaaaaaatattgctgctattgttttcgaaaacccgcgaagcttct gattggtcaagcgctgaaattctattgtaatgaattaggtaggatttcct acctaacctcggcacacttttcagacgatatctagctcttcgggctttat aaatctatgaatTTTACACATAGAACTTTcgcaaaatcaaaatcatcatt ttcaatcaaaatcaaaagatttctttttacAGTAATATTTTTCTTAACAT CTTCGAACCAAAATATAGTTTTATAtcctttttatagatttttatatagc attattttatagatttttttagaaatagaTTTTATCCAGATTTTATTAGA TTCATCCTATAATAATAGAATTAagtatatttcaaattattcgtGATATA CCAAAAAACAGCACTCAATTTTCTTGCCtttttgaaagttattttttcat taGACCTATTACAATATCAACGGTGCCACCTCGTTTTTGGCCTCCTGTAG TACAGAATCAcgaatattattatatactaCCATATTGTTGTTATTATATA TACTTGATatataatcaaatttttattatatcaaaaatatatttagtcAG TCTCAGTCTTCCCCTCATTGTTTCCCCTCGAAATATGTTATCATTACGTC ATATCACGTCATCG

Coding sequence (CDS) from alignment at sc0000018:416919..433182+

>TCONS_00002040 ID=TCONS_00002040|Name=TCONS_00002040|organism=Clytia hemisphaerica|type=CDS|length=11358bp|location=Sequence derived from alignment at sc0000018:416919..433182+ (Clytia hemisphaerica)
ATGGCATTTGTTGAAGGTTATGACGTGGAAACAGTGCAAGATATTTCATC
CGATTTATTTTGCGTCATTTGTTTGAAATTGATGAGAAATCCTGTTCAAT
TCAAGTGTGGCCATGGAATGTGCTTTGTATGCTTCAAAAGCTTGCTACAC
CGCTCTAAACAAAAAGCCACAACACAATGTCCACAATGTCGTGAAGTTGT
CAAAGAAGGACAGATTGTATCAAACGTGATGTTGCACCGCATTATACTTT
CATTGCATGTGCTATGTGGTAACCATGACAACGGATGTAAATGGACCGGT
GAATTGGATCGATTTGATGAGCATTTCGCGCAATGTACGAAACACTCAGA
AAATGCAGCaaacaaaaagtccaaaaagaaaaagAAAAGAGCAGATCAAA
ATCAACAAGCACCACAAAACATCCAGAACGAGCTTCTCCTGCAAATCACT
GAACAGCTCTCAAACCTTAAAGAATACATTATCAGCCCGAACGCAACTAA
AACGCAAGACTCGGACCCAAACTCCACGGACGCCGCGATGAAACCACCGT
TCTGGACTAGATTTAACAATAAAAGTGTCACGTCTAGTCGCAAAACTAAA
ACATTAGCCTTGATCCTTTTCACTATATCCTTATTGTCTGGAATGCATAT
ACTGGGCGGAGGCTTCTCTGATTGGTTCATGGACGAAGACGCAACAGCCA
ATCAAACGCCTGGAATCGATCACGTGGCAACATACCAGCAAGTCCATAGC
GAACTGGCAAAAATGAATTCCCTAATATACGcacagcaaaacaatttttt
tcaactccATCTCGGCTCCAAGGAGCTACAATCGGACCTGGAAGCACAGA
AAACGGCGACACTCAGGCTAACGGGTTTATACTTGAAGAATAGCCTGAAC
GCGGCACATTTCACTAAGACCTCCATCGCAGATGATGTGGATGATGTGTT
TTCACAAGAGATGATGCACCGTAAATTAGGACTGGAACGAACGGCCGGTT
TCCAATTGGTCAACATGAAGGAAGATGCTTACGCAAGGTTGAAATCACTA
CAAAACCAATCGCTGGCCACACTGACTGTATTTAACGCTACCGATTTTTT
AACAccttttttgaaagattgtAAAGCATTCCAACGTGATTTCGCACAAC
AAATTATTATTGCCTTGACAACCAGTGAAAACTTAGTTACGCATTCTTTT
CAACAAGCTAGACGCAAGATGGCGTTTTACGTTGCTAAGGAGAGCGATTT
CACTGGATTTGATTATGAAGATGTTAAGAAACATTTAGTGGAAGAACGCG
AGAAAAGTGACGTCATCTTACGTGAGAAATTAAACGAGGCAAAACAAGAG
GAATATGTTCGAATGTTGAGACAAGAATACAATGCGTTAAATCAAACGTA
CCATGAAAtgttattaaaatcaatttcacAGTACGAGTTGGACGCGTCTT
ATCAAAATCGAGCAGCTTTCGTTTTTAGCCAacttgaaaatgttgatttt
ggaAACGGACGTTACTTGTGGAGAATGAACAGCTCCCTGTTACCTCTATT
ACCAACTGGACATGGGTACTATTCAGAGAAATTCACCACCATTGAGGCTA
AAGCACCGAACCAAGTTGTCACCTATGCTAAATTATGGTTATTACGTACG
TCGGTTCAAGATAACACATGGAAAGTGACATATGAGCAGTACGGTGATTC
TCCAGTGAGAATGAAAGTTTTAGTTGTTAATCAGAAGATGGATAAGGATT
TAGAATGTGTGGAATCGTTTCGCCAGACGAATGAAAAAGATGAGCTGATT
ATCGATTTTGATATTCCCTTCAGTTTTGAAGTTTTGGAAGAGAATGGTTA
TATTGTAGATGAGAAGATTTTGGTCAAAGCATATGTTGTATAGATGGCAT
TTGTTGAAGGTTATGACGTGGAAACAGTGCAAGATATTTCATCCGATTTA
TTTTGCGTCATTTGTTTGAAATTGATGAGAAATCCTGTTCAATTCAAGTG
TGGCCATGGAATGTGCTTTGTATGCTTCAAAAGCTTGCTACACCGCTCTA
AACAAAAAGCCACAACACAATGTCCACAATGTCGTGAAGTTGTCAAAGAA
GGACAGATTGTATCAAACGTGATGTTGCACCGCATTATACTTTCATTGCA
TGTGCTATGTGGTAACCATGACAACGGATGTAAATGGACCGGTGAATTGG
ATCGATTTGATGAGCATTTCGCGCAATGTACGAAACACTCAGAAAATGCA
GCaaacaaaaagtccaaaaagaaaaagAAAAGAGCAGATCAAAATCAACA
AGCACCACAAAACATCCAGAACGAGCTTCTCCTGCAAATCACTGAACAGC
TCTCAAACCTTAAAGAATACATTATCAGCCCGAACGCAACTAAAACGCAA
GACTCGGACCCAAACTCCACGGACGCCGCGATGAAACCACCGTTCTGGAC
TAGATTTAACAATAAAAGTGTCACGTCTAGTCGCAAAACTAAAACATTAG
CCTTGATCCTTTTCACTATATCCTTATTGTCTGGAATGCATATACTGGGC
GGAGGCTTCTCTGATTGGTTCATGGACGAAGACGCAACAGCCAATCAAAC
GCCTGGAATCGATCACGTGGCAACATACCAGCAAGTCCATAGCGAACTGG
CAAAAATGAATTCCCTAATATACGcacagcaaaacaatttttttcaactc
cATCTCGGCTCCAAGGAGCTACAATCGGACCTGGAAGCACAGAAAACGGC
GACACTCAGGCTAACGGGTTTATACTTGAAGAATAGCCTGAACGCGGCAC
ATTTCACTAAGACCTCCATCGCAGATGATGTGGATGATGTGTTTTCACAA
GAGATGATGCACCGTAAATTAGGACTGGAACGAACGGCCGGTTTCCAATT
GGTCAACATGAAGGAAGATGCTTACGCAAGGTTGAAATCACTACAAAACC
AATCGCTGGCCACACTGACTGTATTTAACGCTACCGATTTTTTAACAcct
tttttgaaagattgtAAAGCATTCCAACGTGATTTCGCACAACAAATTAT
TATTGCCTTGACAACCAGTGAAAACTTAGTTACGCATTCTTTTCAACAAG
CTAGACGCAAGATGGCGTTTTACGTTGCTAAGGAGAGCGATTTCACTGGA
TTTGATTATGAAGATGTTAAGAAACATTTAGTGGAAGAACGCGAGAAAAG
TGACGTCATCTTACGTGAGAAATTAAACGAGGCAAAACAAGAGGAATATG
TTCGAATGTTGAGACAAGAATACAATGCGTTAAATCAAACGTACCATGAA
AtgttattaaaatcaatttcacAGTACGAGTTGGACGCGTCTTATCAAAA
TCGAGCAGCTTTCGTTTTTAGCCAacttgaaaatgttgattttggaAACG
GACGTTACTTGTGGAGAATGAACAGCTCCCTGTTACCTCTATTACCAACT
GGACATGGGTACTATTCAGAGAAATTCACCACCATTGAGGCTAAAGCACC
GAACCAAGTTGTCACCTATGCTAAATTATGGTTATTACGTACGTCGGTTC
AAGATAACACATGGAAAGTGACATATGAGCAGTACGGTGATTCTCCAGTG
AGAATGAAAGTTTTAGTTGTTAATCAGAAGATGGATAAGGATTTAGAATG
TGTGGAATCGTTTCGCCAGACGAATGAAAAAGATGAGCTGATTATCGATT
TTGATATTCCCTTCAGTTTTGAAGTTTTGGAAGAGAATGGTTATATTGTA
GATGAGAAGATTTTGGTCAAAGCATATGTTGTATAGATGGCATTTGTTGA
AGGTTATGACGTGGAAACAGTGCAAGATATTTCATCCGATTTATTTTGCG
TCATTTGTTTGAAATTGATGAGAAATCCTGTTCAATTCAAGTGTGGCCAT
GGAATGTGCTTTGTATGCTTCAAAAGCTTGCTACACCGCTCTAAACAAAA
AGCCACAACACAATGTCCACAATGTCGTGAAGTTGTCAAAGAAGGACAGA
TTGTATCAAACGTGATGTTGCACCGCATTATACTTTCATTGCATGTGCTA
TGTGGTAACCATGACAACGGATGTAAATGGACCGGTGAATTGGATCGATT
TGATGAGCATTTCGCGCAATGTACGAAACACTCAGAAAATGCAGCaaaca
aaaagtccaaaaagaaaaagAAAAGAGCAGATCAAAATCAACAAGCACCA
CAAAACATCCAGAACGAGCTTCTCCTGCAAATCACTGAACAGCTCTCAAA
CCTTAAAGAATACATTATCAGCCCGAACGCAACTAAAACGCAAGACTCGG
ACCCAAACTCCACGGACGCCGCGATGAAACCACCGTTCTGGACTAGATTT
AACAATAAAAGTGTCACGTCTAGTCGCAAAACTAAAACATTAGCCTTGAT
CCTTTTCACTATATCCTTATTGTCTGGAATGCATATACTGGGCGGAGGCT
TCTCTGATTGGTTCATGGACGAAGACGCAACAGCCAATCAAACGCCTGGA
ATCGATCACGTGGCAACATACCAGCAAGTCCATAGCGAACTGGCAAAAAT
GAATTCCCTAATATACGcacagcaaaacaatttttttcaactccATCTCG
GCTCCAAGGAGCTACAATCGGACCTGGAAGCACAGAAAACGGCGACACTC
AGGCTAACGGGTTTATACTTGAAGAATAGCCTGAACGCGGCACATTTCAC
TAAGACCTCCATCGCAGATGATGTGGATGATGTGTTTTCACAAGAGATGA
TGCACCGTAAATTAGGACTGGAACGAACGGCCGGTTTCCAATTGGTCAAC
ATGAAGGAAGATGCTTACGCAAGGTTGAAATCACTACAAAACCAATCGCT
GGCCACACTGACTGTATTTAACGCTACCGATTTTTTAACAccttttttga
aagattgtAAAGCATTCCAACGTGATTTCGCACAACAAATTATTATTGCC
TTGACAACCAGTGAAAACTTAGTTACGCATTCTTTTCAACAAGCTAGACG
CAAGATGGCGTTTTACGTTGCTAAGGAGAGCGATTTCACTGGATTTGATT
ATGAAGATGTTAAGAAACATTTAGTGGAAGAACGCGAGAAAAGTGACGTC
ATCTTACGTGAGAAATTAAACGAGGCAAAACAAGAGGAATATGTTCGAAT
GTTGAGACAAGAATACAATGCGTTAAATCAAACGTACCATGAAAtgttat
taaaatcaatttcacAGTACGAGTTGGACGCGTCTTATCAAAATCGAGCA
GCTTTCGTTTTTAGCCAacttgaaaatgttgattttggaAACGGACGTTA
CTTGTGGAGAATGAACAGCTCCCTGTTACCTCTATTACCAACTGGACATG
GGTACTATTCAGAGAAATTCACCACCATTGAGGCTAAAGCACCGAACCAA
GTTGTCACCTATGCTAAATTATGGTTATTACGTACGTCGGTTCAAGATAA
CACATGGAAAGTGACATATGAGCAGTACGGTGATTCTCCAGTGAGAATGA
AAGTTTTAGTTGTTAATCAGAAGATGGATAAGGATTTAGAATGTGTGGAA
TCGTTTCGCCAGACGAATGAAAAAGATGAGCTGATTATCGATTTTGATAT
TCCCTTCAGTTTTGAAGTTTTGGAAGAGAATGGTTATATTGTAGATGAGA
AGATTTTGGTCAAAGCATATGTTGTATAGATGGCATTTGTTGAAGGTTAT
GACGTGGAAACAGTGCAAGATATTTCATCCGATTTATTTTGCGTCATTTG
TTTGAAATTGATGAGAAATCCTGTTCAATTCAAGTGTGGCCATGGAATGT
GCTTTGTATGCTTCAAAAGCTTGCTACACCGCTCTAAACAAAAAGCCACA
ACACAATGTCCACAATGTCGTGAAGTTGTCAAAGAAGGACAGATTGTATC
AAACGTGATGTTGCACCGCATTATACTTTCATTGCATGTGCTATGTGGTA
ACCATGACAACGGATGTAAATGGACCGGTGAATTGGATCGATTTGATGAG
CATTTCGCGCAATGTACGAAACACTCAGAAAATGCAGCaaacaaaaagtc
caaaaagaaaaagAAAAGAGCAGATCAAAATCAACAAGCACCACAAAACA
TCCAGAACGAGCTTCTCCTGCAAATCACTGAACAGCTCTCAAACCTTAAA
GAATACATTATCAGCCCGAACGCAACTAAAACGCAAGACTCGGACCCAAA
CTCCACGGACGCCGCGATGAAACCACCGTTCTGGACTAGATTTAACAATA
AAAGTGTCACGTCTAGTCGCAAAACTAAAACATTAGCCTTGATCCTTTTC
ACTATATCCTTATTGTCTGGAATGCATATACTGGGCGGAGGCTTCTCTGA
TTGGTTCATGGACGAAGACGCAACAGCCAATCAAACGCCTGGAATCGATC
ACGTGGCAACATACCAGCAAGTCCATAGCGAACTGGCAAAAATGAATTCC
CTAATATACGcacagcaaaacaatttttttcaactccATCTCGGCTCCAA
GGAGCTACAATCGGACCTGGAAGCACAGAAAACGGCGACACTCAGGCTAA
CGGGTTTATACTTGAAGAATAGCCTGAACGCGGCACATTTCACTAAGACC
TCCATCGCAGATGATGTGGATGATGTGTTTTCACAAGAGATGATGCACCG
TAAATTAGGACTGGAACGAACGGCCGGTTTCCAATTGGTCAACATGAAGG
AAGATGCTTACGCAAGGTTGAAATCACTACAAAACCAATCGCTGGCCACA
CTGACTGTATTTAACGCTACCGATTTTTTAACAccttttttgaaagattg
tAAAGCATTCCAACGTGATTTCGCACAACAAATTATTATTGCCTTGACAA
CCAGTGAAAACTTAGTTACGCATTCTTTTCAACAAGCTAGACGCAAGATG
GCGTTTTACGTTGCTAAGGAGAGCGATTTCACTGGATTTGATTATGAAGA
TGTTAAGAAACATTTAGTGGAAGAACGCGAGAAAAGTGACGTCATCTTAC
GTGAGAAATTAAACGAGGCAAAACAAGAGGAATATGTTCGAATGTTGAGA
CAAGAATACAATGCGTTAAATCAAACGTACCATGAAAtgttattaaaatc
aatttcacAGTACGAGTTGGACGCGTCTTATCAAAATCGAGCAGCTTTCG
TTTTTAGCCAacttgaaaatgttgattttggaAACGGACGTTACTTGTGG
AGAATGAACAGCTCCCTGTTACCTCTATTACCAACTGGACATGGGTACTA
TTCAGAGAAATTCACCACCATTGAGGCTAAAGCACCGAACCAAGTTGTCA
CCTATGCTAAATTATGGTTATTACGTACGTCGGTTCAAGATAACACATGG
AAAGTGACATATGAGCAGTACGGTGATTCTCCAGTGAGAATGAAAGTTTT
AGTTGTTAATCAGAAGATGGATAAGGATTTAGAATGTGTGGAATCGTTTC
GCCAGACGAATGAAAAAGATGAGCTGATTATCGATTTTGATATTCCCTTC
AGTTTTGAAGTTTTGGAAGAGAATGGTTATATTGTAGATGAGAAGATTTT
GGTCAAAGCATATGTTGTATAGATGGCATTTGTTGAAGGTTATGACGTGG
AAACAGTGCAAGATATTTCATCCGATTTATTTTGCGTCATTTGTTTGAAA
TTGATGAGAAATCCTGTTCAATTCAAGTGTGGCCATGGAATGTGCTTTGT
ATGCTTCAAAAGCTTGCTACACCGCTCTAAACAAAAAGCCACAACACAAT
GTCCACAATGTCGTGAAGTTGTCAAAGAAGGACAGATTGTATCAAACGTG
ATGTTGCACCGCATTATACTTTCATTGCATGTGCTATGTGGTAACCATGA
CAACGGATGTAAATGGACCGGTGAATTGGATCGATTTGATGAGCATTTCG
CGCAATGTACGAAACACTCAGAAAATGCAGCaaacaaaaagtccaaaaag
aaaaagAAAAGAGCAGATCAAAATCAACAAGCACCACAAAACATCCAGAA
CGAGCTTCTCCTGCAAATCACTGAACAGCTCTCAAACCTTAAAGAATACA
TTATCAGCCCGAACGCAACTAAAACGCAAGACTCGGACCCAAACTCCACG
GACGCCGCGATGAAACCACCGTTCTGGACTAGATTTAACAATAAAAGTGT
CACGTCTAGTCGCAAAACTAAAACATTAGCCTTGATCCTTTTCACTATAT
CCTTATTGTCTGGAATGCATATACTGGGCGGAGGCTTCTCTGATTGGTTC
ATGGACGAAGACGCAACAGCCAATCAAACGCCTGGAATCGATCACGTGGC
AACATACCAGCAAGTCCATAGCGAACTGGCAAAAATGAATTCCCTAATAT
ACGcacagcaaaacaatttttttcaactccATCTCGGCTCCAAGGAGCTA
CAATCGGACCTGGAAGCACAGAAAACGGCGACACTCAGGCTAACGGGTTT
ATACTTGAAGAATAGCCTGAACGCGGCACATTTCACTAAGACCTCCATCG
CAGATGATGTGGATGATGTGTTTTCACAAGAGATGATGCACCGTAAATTA
GGACTGGAACGAACGGCCGGTTTCCAATTGGTCAACATGAAGGAAGATGC
TTACGCAAGGTTGAAATCACTACAAAACCAATCGCTGGCCACACTGACTG
TATTTAACGCTACCGATTTTTTAACAccttttttgaaagattgtAAAGCA
TTCCAACGTGATTTCGCACAACAAATTATTATTGCCTTGACAACCAGTGA
AAACTTAGTTACGCATTCTTTTCAACAAGCTAGACGCAAGATGGCGTTTT
ACGTTGCTAAGGAGAGCGATTTCACTGGATTTGATTATGAAGATGTTAAG
AAACATTTAGTGGAAGAACGCGAGAAAAGTGACGTCATCTTACGTGAGAA
ATTAAACGAGGCAAAACAAGAGGAATATGTTCGAATGTTGAGACAAGAAT
ACAATGCGTTAAATCAAACGTACCATGAAAtgttattaaaatcaatttca
cAGTACGAGTTGGACGCGTCTTATCAAAATCGAGCAGCTTTCGTTTTTAG
CCAacttgaaaatgttgattttggaAACGGACGTTACTTGTGGAGAATGA
ACAGCTCCCTGTTACCTCTATTACCAACTGGACATGGGTACTATTCAGAG
AAATTCACCACCATTGAGGCTAAAGCACCGAACCAAGTTGTCACCTATGC
TAAATTATGGTTATTACGTACGTCGGTTCAAGATAACACATGGAAAGTGA
CATATGAGCAGTACGGTGATTCTCCAGTGAGAATGAAAGTTTTAGTTGTT
AATCAGAAGATGGATAAGGATTTAGAATGTGTGGAATCGTTTCGCCAGAC
GAATGAAAAAGATGAGCTGATTATCGATTTTGATATTCCCTTCAGTTTTG
AAGTTTTGGAAGAGAATGGTTATATTGTAGATGAGAAGATTTTGGTCAAA
GCATATGTTGTATAGATGGCATTTGTTGAAGGTTATGACGTGGAAACAGT
GCAAGATATTTCATCCGATTTATTTTGCGTCATTTGTTTGAAATTGATGA
GAAATCCTGTTCAATTCAAGTGTGGCCATGGAATGTGCTTTGTATGCTTC
AAAAGCTTGCTACACCGCTCTAAACAAAAAGCCACAACACAATGTCCACA
ATGTCGTGAAGTTGTCAAAGAAGGACAGATTGTATCAAACGTGATGTTGC
ACCGCATTATACTTTCATTGCATGTGCTATGTGGTAACCATGACAACGGA
TGTAAATGGACCGGTGAATTGGATCGATTTGATGAGCATTTCGCGCAATG
TACGAAACACTCAGAAAATGCAGCaaacaaaaagtccaaaaagaaaaagA
AAAGAGCAGATCAAAATCAACAAGCACCACAAAACATCCAGAACGAGCTT
CTCCTGCAAATCACTGAACAGCTCTCAAACCTTAAAGAATACATTATCAG
CCCGAACGCAACTAAAACGCAAGACTCGGACCCAAACTCCACGGACGCCG
CGATGAAACCACCGTTCTGGACTAGATTTAACAATAAAAGTGTCACGTCT
AGTCGCAAAACTAAAACATTAGCCTTGATCCTTTTCACTATATCCTTATT
GTCTGGAATGCATATACTGGGCGGAGGCTTCTCTGATTGGTTCATGGACG
AAGACGCAACAGCCAATCAAACGCCTGGAATCGATCACGTGGCAACATAC
CAGCAAGTCCATAGCGAACTGGCAAAAATGAATTCCCTAATATACGcaca
gcaaaacaatttttttcaactccATCTCGGCTCCAAGGAGCTACAATCGG
ACCTGGAAGCACAGAAAACGGCGACACTCAGGCTAACGGGTTTATACTTG
AAGAATAGCCTGAACGCGGCACATTTCACTAAGACCTCCATCGCAGATGA
TGTGGATGATGTGTTTTCACAAGAGATGATGCACCGTAAATTAGGACTGG
AACGAACGGCCGGTTTCCAATTGGTCAACATGAAGGAAGATGCTTACGCA
AGGTTGAAATCACTACAAAACCAATCGCTGGCCACACTGACTGTATTTAA
CGCTACCGATTTTTTAACAccttttttgaaagattgtAAAGCATTCCAAC
GTGATTTCGCACAACAAATTATTATTGCCTTGACAACCAGTGAAAACTTA
GTTACGCATTCTTTTCAACAAGCTAGACGCAAGATGGCGTTTTACGTTGC
TAAGGAGAGCGATTTCACTGGATTTGATTATGAAGATGTTAAGAAACATT
TAGTGGAAGAACGCGAGAAAAGTGACGTCATCTTACGTGAGAAATTAAAC
GAGGCAAAACAAGAGGAATATGTTCGAATGTTGAGACAAGAATACAATGC
GTTAAATCAAACGTACCATGAAAtgttattaaaatcaatttcacAGTACG
AGTTGGACGCGTCTTATCAAAATCGAGCAGCTTTCGTTTTTAGCCAactt
gaaaatgttgattttggaAACGGACGTTACTTGTGGAGAATGAACAGCTC
CCTGTTACCTCTATTACCAACTGGACATGGGTACTATTCAGAGAAATTCA
CCACCATTGAGGCTAAAGCACCGAACCAAGTTGTCACCTATGCTAAATTA
TGGTTATTACGTACGTCGGTTCAAGATAACACATGGAAAGTGACATATGA
GCAGTACGGTGATTCTCCAGTGAGAATGAAAGTTTTAGTTGTTAATCAGA
AGATGGATAAGGATTTAGAATGTGTGGAATCGTTTCGCCAGACGAATGAA
AAAGATGAGCTGATTATCGATTTTGATATTCCCTTCAGTTTTGAAGTTTT
GGAAGAGAATGGTTATATTGTAGATGAGAAGATTTTGGTCAAAGCATATG
TTGTATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001073XLOC_001073Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002040-proteinTCONS_00002040-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002040-exon-sc0000018-1491911889:416919..417212TCONS_00002040-exon-sc0000018-1491911889:416919..417212Clytia hemisphaericaexon
TCONS_00002040-exon-sc0000018-1510915933:416919..417212TCONS_00002040-exon-sc0000018-1510915933:416919..417212Clytia hemisphaericaexon
TCONS_00002040-exon-sc0000018-1575043694:416919..417212TCONS_00002040-exon-sc0000018-1575043694:416919..417212Clytia hemisphaericaexon
TCONS_00002040-exon-sc0000018-1491911889:417796..417844TCONS_00002040-exon-sc0000018-1491911889:417796..417844Clytia hemisphaericaexon
TCONS_00002040-exon-sc0000018-1510915933:417796..417844TCONS_00002040-exon-sc0000018-1510915933:417796..417844Clytia hemisphaericaexon
TCONS_00002040-exon-sc0000018-1575043694:417796..417844TCONS_00002040-exon-sc0000018-1575043694:417796..417844Clytia hemisphaericaexon
TCONS_00002040-exon-sc0000018-1491911889:423723..423827TCONS_00002040-exon-sc0000018-1491911889:423723..423827Clytia hemisphaericaexon
TCONS_00002040-exon-sc0000018-1510915933:423723..423827TCONS_00002040-exon-sc0000018-1510915933:423723..423827Clytia hemisphaericaexon
TCONS_00002040-exon-sc0000018-1575043694:423723..423827TCONS_00002040-exon-sc0000018-1575043694:423723..423827Clytia hemisphaericaexon
TCONS_00002040-exon-sc0000018-1491911889:424519..424584TCONS_00002040-exon-sc0000018-1491911889:424519..424584Clytia hemisphaericaexon
TCONS_00002040-exon-sc0000018-1510915933:424519..424584TCONS_00002040-exon-sc0000018-1510915933:424519..424584Clytia hemisphaericaexon
TCONS_00002040-exon-sc0000018-1575043694:424519..424584TCONS_00002040-exon-sc0000018-1575043694:424519..424584Clytia hemisphaericaexon
TCONS_00002040-exon-sc0000018-1491911889:428012..428664TCONS_00002040-exon-sc0000018-1491911889:428012..428664Clytia hemisphaericaexon
TCONS_00002040-exon-sc0000018-1510915933:428012..428664TCONS_00002040-exon-sc0000018-1510915933:428012..428664Clytia hemisphaericaexon
TCONS_00002040-exon-sc0000018-1575043694:428012..428664TCONS_00002040-exon-sc0000018-1575043694:428012..428664Clytia hemisphaericaexon
TCONS_00002040-exon-sc0000018-1491911889:431309..433182TCONS_00002040-exon-sc0000018-1491911889:431309..433182Clytia hemisphaericaexon
TCONS_00002040-exon-sc0000018-1510915933:431309..433182TCONS_00002040-exon-sc0000018-1510915933:431309..433182Clytia hemisphaericaexon
TCONS_00002040-exon-sc0000018-1575043694:431309..433182TCONS_00002040-exon-sc0000018-1575043694:431309..433182Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:416919..433182 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.457155 0.712163 0.303178 0.344446 13.5171 10.6591 11.074 10.7215 6.30679 10.3832 11.5321 5.26671 9.98107 8.40827 10.2681 11.8949 10.5095 12.762 9.89157 9.83014 12.5341 12.2594 6.84683 9.65583 14.9134 14.771 13.3198 11.0511 13.7231 11.7265
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002040 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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