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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002127 ID=TCONS_00002127|Name=TCONS_00002127|organism=Clytia hemisphaerica|type=transcript|length=1202bp
AGCTGCAAAGAAAGTACAAAATGATGCAAAATTACATGCGATTAATAATA
ATTATCAAAGAAATGTTCatgttaaaaaattcgaaattgaTTTGAAGTAG
CTAACAATTCTCTCTGATATAAAAGTGACGTATATACAAAATATTACGAT
TTCCTTAGCATACGATACACTGAACATTACAActattttatttacaaaaa
catGGTACACGAAATAattcattttttgcacaaatcatCATTTATATGTT
CGAAAAGCTCTTCACCAGTCTCAAAAGTTTTAGCGTTAACATCACCGAAA
CATCCCTCTATCCTCTTCGCTAAAAATTGCCGGTAGTATAAGTCTTGCTT
TTCAAAATATGGACAATAATACCACGATTCTTCCCCGTTTAAAATAAGGA
TGTAAACATATCTTTTGTTCTTTTCCTTGTTAAGGGGATGGTTTTTCCAA
TTAAACTCAGTTTTACTCAAATGCCCGTCTGATGATAGTTTCATGCCTTC
CAAGCtagaagaaaaatgaatttctaATGGTTCTTGGTTTACTTTAGAAC
GATGGTCGTTTACTTTTCTTAAAATGGCCGACGCCATTGGAACATAGGTA
AATTTAATATTAACAACAGTAATGAATATCTTTCGAATCTCCTTCATACA
ATCATCAGTGAAAAAATTTGTCTTAGACACGACCCAACGGTACGTCATAT
CGTAAACATCAAAGTCTGGATTTTTTATGACATCAAATAGTGTCTTAATG
ACTGGGTGCTGCATTGAAACACTATACTCAATTCTTTCACGTGTTTCAAT
ATTTCGATTTAATGGAAGCCAATCTATTGGTTTATAATAAGTGTAAGTCC
TAAAAACAATAACTGCCCATTGTCTCTTGTCCTGCAATAACTCCAGATAT
ACGAGCATTTCATCAGCAAAACGGATATCACGTTCCATAGAGACAATAGT
TTGTTTAATGTTTTTGTCGTTTCCCATGATTTTCTCATCGTAAAGCTGCT
TTATTAGTTCGGCGATTCTACGCAGTTCGTTATCAAATCGAGATGATTCA
AATTGAAACTTGTTTGTTCGAAATTGAAGTTGATTGATATTGTAATTCTT
TCTCAATCTGACTATGTCAAAACCGTCGAAGTAGTTCACCATAAAACATG
CTTCATTGTCAAGTAAATCGTTTAATCCTTGCAAGAAAAAATGGTGATCA
AA Run BLAST on NCBI protein sequence of TCONS_00002127-protein >TCONS_00002127-protein ID=TCONS_00002127-protein|Name=TCONS_00002127-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
FDHHFFLQGLNDLLDNEACFMVNYFDGFDIVRLRKNYNINQLQFRTNKFQ
FESSRFDNELRRIAELIKQLYDEKIMGNDKNIKQTIVSMERDIRFADEML
VYLELLQDKRQWAVIVFRTYTYYKPIDWLPLNRNIETRERIEYSVSMQHP
VIKTLFDVIKNPDFDVYDMTYRWVVSKTNFFTDDCMKEIRKIFITVVNIK
FTYVPMASAILRKVNDHRSKVNQEPLEIHFSSSLEGMKLSSDGHLSKTEF
NWKNHPLNKEKNKRYVYILILNGEESWYYCPYFEKQDLYYRQFLAKRIEG
CFGDVNAKTFETGEELFEHINDDLCKK Run BLAST on NCBI transcript from alignment at sc0000018:301398..302599- Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002127 ID=TCONS_00002127|Name=TCONS_00002127|organism=Clytia hemisphaerica|type=transcript|length=1202bp|location=Sequence derived from alignment at sc0000018:301398..302599- (Clytia hemisphaerica)
AGCTGCAAAGAAAGTACAAAATGATGCAAAATTACATGCGATTAATAATA
ATTATCAAAGAAATGTTCATGTTAAAAAATTCGAAATTGATTTGAAGTAG
CTAACAATTCTCTCTGATATAAAAGTGACGTATATACAAAATATTACGAT
TTCCTTAGCATACGATACACTGAACATTACAACTATTTTATTTACAAAAA
CATGGTACACGAAATAATTCATTTTTTGCACAAATCATCATTTATATGTT
CGAAAAGCTCTTCACCAGTCTCAAAAGTTTTAGCGTTAACATCACCGAAA
CATCCCTCTATCCTCTTCGCTAAAAATTGCCGGTAGTATAAGTCTTGCTT
TTCAAAATATGGACAATAATACCACGATTCTTCCCCGTTTAAAATAAGGA
TGTAAACATATCTTTTGTTCTTTTCCTTGTTAAGGGGATGGTTTTTCCAA
TTAAACTCAGTTTTACTCAAATGCCCGTCTGATGATAGTTTCATGCCTTC
CAAGCTAGAAGAAAAATGAATTTCTAATGGTTCTTGGTTTACTTTAGAAC
GATGGTCGTTTACTTTTCTTAAAATGGCCGACGCCATTGGAACATAGGTA
AATTTAATATTAACAACAGTAATGAATATCTTTCGAATCTCCTTCATACA
ATCATCAGTGAAAAAATTTGTCTTAGACACGACCCAACGGTACGTCATAT
CGTAAACATCAAAGTCTGGATTTTTTATGACATCAAATAGTGTCTTAATG
ACTGGGTGCTGCATTGAAACACTATACTCAATTCTTTCACGTGTTTCAAT
ATTTCGATTTAATGGAAGCCAATCTATTGGTTTATAATAAGTGTAAGTCC
TAAAAACAATAACTGCCCATTGTCTCTTGTCCTGCAATAACTCCAGATAT
ACGAGCATTTCATCAGCAAAACGGATATCACGTTCCATAGAGACAATAGT
TTGTTTAATGTTTTTGTCGTTTCCCATGATTTTCTCATCGTAAAGCTGCT
TTATTAGTTCGGCGATTCTACGCAGTTCGTTATCAAATCGAGATGATTCA
AATTGAAACTTGTTTGTTCGAAATTGAAGTTGATTGATATTGTAATTCTT
TCTCAATCTGACTATGTCAAAACCGTCGAAGTAGTTCACCATAAAACATG
CTTCATTGTCAAGTAAATCGTTTAATCCTTGCAAGAAAAAATGGTGATCA
AA Coding sequence (CDS) from alignment at sc0000018:301398..302599- >TCONS_00002127 ID=TCONS_00002127|Name=TCONS_00002127|organism=Clytia hemisphaerica|type=CDS|length=984bp|location=Sequence derived from alignment at sc0000018:301398..302599- (Clytia hemisphaerica)
TCATTTTTTGCACAAATCATCATTTATATGTTCGAAAAGCTCTTCACCAG
TCTCAAAAGTTTTAGCGTTAACATCACCGAAACATCCCTCTATCCTCTTC
GCTAAAAATTGCCGGTAGTATAAGTCTTGCTTTTCAAAATATGGACAATA
ATACCACGATTCTTCCCCGTTTAAAATAAGGATGTAAACATATCTTTTGT
TCTTTTCCTTGTTAAGGGGATGGTTTTTCCAATTAAACTCAGTTTTACTC
AAATGCCCGTCTGATGATAGTTTCATGCCTTCCAAGCTAGAAGAAAAATG
AATTTCTAATGGTTCTTGGTTTACTTTAGAACGATGGTCGTTTACTTTTC
TTAAAATGGCCGACGCCATTGGAACATAGGTAAATTTAATATTAACAACA
GTAATGAATATCTTTCGAATCTCCTTCATACAATCATCAGTGAAAAAATT
TGTCTTAGACACGACCCAACGGTACGTCATATCGTAAACATCAAAGTCTG
GATTTTTTATGACATCAAATAGTGTCTTAATGACTGGGTGCTGCATTGAA
ACACTATACTCAATTCTTTCACGTGTTTCAATATTTCGATTTAATGGAAG
CCAATCTATTGGTTTATAATAAGTGTAAGTCCTAAAAACAATAACTGCCC
ATTGTCTCTTGTCCTGCAATAACTCCAGATATACGAGCATTTCATCAGCA
AAACGGATATCACGTTCCATAGAGACAATAGTTTGTTTAATGTTTTTGTC
GTTTCCCATGATTTTCTCATCGTAAAGCTGCTTTATTAGTTCGGCGATTC
TACGCAGTTCGTTATCAAATCGAGATGATTCAAATTGAAACTTGTTTGTT
CGAAATTGAAGTTGATTGATATTGTAATTCTTTCTCAATCTGACTATGTC
AAAACCGTCGAAGTAGTTCACCATAAAACATGCTTCATTGTCAAGTAAAT
CGTTTAATCCTTGCAAGAAAAAATGGTGATCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002127-exon-sc0000018-1575043694:301398..302599 | TCONS_00002127-exon-sc0000018-1575043694:301398..302599 | Clytia hemisphaerica | exon |
| TCONS_00002127-exon-sc0000018-1510915933:301398..302599 | TCONS_00002127-exon-sc0000018-1510915933:301398..302599 | Clytia hemisphaerica | exon |
| TCONS_00002127-exon-sc0000018-1491911889:301398..302599 | TCONS_00002127-exon-sc0000018-1491911889:301398..302599 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018 | supercontig | sc0000018:301398..302599 - |
Blast
The following BLAST results are available for this feature:
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