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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002156 ID=TCONS_00002156|Name=TCONS_00002156|organism=Clytia hemisphaerica|type=transcript|length=1786bp
aaagtgaattattaATGACTTATTAtacgattttttttattgtttgtcaT
AGCAACAccgcaaaaaataaaaatatagagtTGGCCAGATTTGGCCCGTG
TGGAAATGTTCGACTTTCTCAGCATGAAAAATCTATTATAAACTTGTTAA
GAATACTTTACATACAATTATATTGAATTTAGTTTCCCATAAACTTTGTC
ATAACAACATAAGTTCTCATAAACCATAATAGCCTAGATTTGGCTATCTT
TCAGCGAGTTTGTGCTCGATTGTAAAGAGATACTACTCCCACGAGCAGAA
GTTCTCGCTGAACTTGCTCTTGAAGAATGAGGTCTATGGGATAAAGCACT
AGAAGGATGCAATAATAAGGGTTCATCTTTCAATGTCCAACGACTTTGAT
ACAAACGTCGAATGTCTCCTTCAATTTCGTCATCTTCCTCATCTTCTTGT
TGTGAAAAAGACAACTCATCTTCTACTGCTTCCTCACTTAAAATCCAACG
ACTTCGGTACAATCTTCGAATATCCAACTCAGCACttccatcttcttctt
ctttgtcttttggGACGTTGTAGACCTGATCGTCCTCTTCAAGTACCCAT
TTACTTCCATACAACCTCCTTACATCTGCTAATGCCTCGTCATTATCGTC
ATaggctgaaaaataaaaaaatacagtaTACACTCTGTTGCAAATGCTAT
GAGACTGTAGTTCAGAAAGATCTTCGAGCTTTCGTTTTGTATTATGGTAA
CTAAATGCCTTAAAGATTCCTCCTTAAAGCAATATGAAGCTATGTAAAAC
TGACCTTTATCTTCTTTAGGGGGTGGTGAGTAGAACCAGGGCATCGGGTG
AATATATTGTTCCTTCTTCTCATCTTCTTCTTCGATTGGAAgaacttttt
gatgttttttcttcCTTAACAAGAAGTAAAGCAAGATGAGGACCAATATG
ATGCcacaaacaatgaaaaaaacgaGCAAAGCAATCACAATGCATTCATC
ATCACTCGTCTTCTTCTCAACAACCTCGTTCCCATATTCCTCCGCCACTC
CGCCCCCTGATTCCACCTGGTGCACATCATCTGCATAAACTGAAGAAGGC
ACTGTATTGTACTTTGTTCCATCAGGCCTCTTCACTGTGAACAAATTGTT
GTATACAAACAAATTCAATCTTCTGAGTGTTTGGTTGTATTTGTTTCCAG
TTAGAATAACTTGAAAAGACACGACGATACTGCCTTTAGTCAGATTGCAG
TTACCGAATTGATCCACTTCCAATTTTAAGTTTTCTCTTGTGTCGTTGCA
AATCTTCTCTGTAGCTGCTTCCATGCTGCCGTACTCTGTAATTAGcgttt
catatttttcaatgaatttgAATCTCATAACACTGTCATGAATAGTGGTA
TCCTCGTTTATTCCGCTTGTTCCTGTTTCTTCGGATGAAGTCTCATTGTT
TGTCCCATTGCTTGCAATTGAAGTTCCATTTGTTGTTAGGTTTGAAGTTT
CCGTAGATGGGGCTGTAGATATAGTAGGAGGAGGGGTAGTAGTTGTGGCT
GGAGTTAGAGTTGGGGTAGTGGTTGTGGTTGTAGTTGGAGGAGGGGTAGT
GGTTGTAGTTTGAGGAGGGGTAGTGGTTGTAGTTGGAGGAAGAGTAGTTG
TTGTAGTTGGAGGGAGTGTAGTGGTTGTAGTTGTAGTTGGAGGAGGGGTA
GTGGTTGTGGTTGTATTTGGAGGAAGAGTAGTAGTTGTAGTTGGAAGAGG
GGTAGTGGTAGTGGTTGTAGTTGGAGGAAGGGTAGT Run BLAST on NCBI transcript from alignment at sc0000018:754157..756023- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002156 ID=TCONS_00002156|Name=TCONS_00002156|organism=Clytia hemisphaerica|type=transcript|length=1867bp|location=Sequence derived from alignment at sc0000018:754157..756023- (Clytia hemisphaerica)
AAAGTGAATTATTAATGACTTATTATACGATTTTTTTTATTGTTTGTCAT
AGCAACACCGCAAAAAATAAAAATATAGAGTTGGCCAGATTTGGCCCGTG
TGGAAATGTTCGACTTTCTCAGCATGAAAAATCTATTATAAACTTGTTAA
GAATACTTTACATACAATTATATTGAATTTAGTTTCCCATAAACTTTGTC
ATAACAACATAAGTTCTCATAAACCATAATAGCCTAGATTTGGCTATCTT
TCAGCGAGTTTGTGCTCGATTGTAAAGAGATACTACTCCCACGAGCAGAA
GTTCTCGCTGAACTTGCTCTTGAAGAATGAGGTCTATGGGATAAAGCACT
AGAAGGATGCAATAATAAGGGTTCATCTTTCAATGTCCAACGACTTTGAT
ACAAACGTCGAATGTCTCCTTCAATTTCGTCATCTTCCTCATCTTCTTGT
TGTGAAAAAGACAACTCATCTTCTACTGCTTCCTCACTTAAAATCCAACG
ACTTCGGTACAATCTTCGAATATCCAACTCAGCACTTCCATCTTCTTCTT
CTTTGTCTTTTGGGACGTTGTAGACCTGATCGTCCTCTTCAAGTACCCAT
TTACTTCCATACAACCTCCTTACATCTGCTAATGCCTCGTCATTATCGTC
ATAGGCTGAAAAATAAAAAAATACAGTATACACTCTGTTGCAAATGCTAT
GAGACTGTAGTTCAGAAAGATCTTCGAGCTTTCGTTTTGTATTATGGTAA
CTAAATGCCTTAAAGATTCCTCCTTAAAGCAATATGAAGCTATGTAAAAC
TGACCTTTATCTTCTTTAGGGGGTGGTGAGTAGAACCAGGGCATCGGGTG
AATGTATTGTCNATATGAAGCTATGTAAAACTGACCTATATCTTCTTTAG
GAGGTGGTGAGTAGAACCAGGGCATCGGGTGAAGATATTGTTCCTTCTTC
TCATCTTCTTCTTCGATTGGAAGAACTTTTTGATGTTTTTTCTTCCTTAA
CAAGAAGTAAAGCAAGATGAGGACCAATATGATGCCACAAACAATGAAAA
AAACGAGCAAAGCAATCACAATGCATTCATCATCACTCGTCTTCTTCTCA
ACAACCTCGTTCCCATATTCCTCCGCCACTCCGCCCCCTGATTCCACCTG
GTGCACATCATCTGCATAAACTGAAGAAGGCACTGTATTGTACTTTGTTC
CATCAGGCCTCTTCACTGTGAACAAATTGTTGTATACAAACAAATTCAAT
CTTCTGAGTGTTTGGTTGTATTTGTTTCCAGTTAGAATAACTTGAAAAGA
CACGACGATACTGCCTTTAGTCAGATTGCAGTTACCGAATTGATCCACTT
CCAATTTTAAGTTTTCTCTTGTGTCGTTGCAAATCTTCTCTGTAGCTGCT
TCCATGCTGCCGTACTCTGTAATTAGCGTTTCATATTTTTCAATGAATTT
GAATCTCATAACACTGTCATGAATAGTGGTATCCTCGTTTATTCCGCTTG
TTCCTGTTTCTTCGGATGAAGTCTCATTGTTTGTCCCATTGCTTGCAATT
GAAGTTCCATTTGTTGTTAGGTTTGAAGTTTCCGTAGATGGGGCTGTAGA
TATAGTAGGAGGAGGGGTAGTAGTTGTGGCTGGAGTTAGAGTTGGGGTAG
TGGTTGTGGTTGTAGTTGGAGGAGGGGTAGTGGTTGTAGTTTGAGGAGGG
GTAGTGGTTGTAGTTGGAGGAAGAGTAGTTGTTGTAGTTGGAGGGAGTGT
AGTGGTTGTAGTTGTAGTTGGAGGAGGGGTAGTGGTTGTGGTTGTATTTG
GAGGAAGAGTAGTAGTTGTAGTTGGAAGAGGGGTAGTGGTAGTGGTTGTA
GTTGGAGGAAGGGTAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002156-exon-sc0000018-1575043694:755171..756023 | TCONS_00002156-exon-sc0000018-1575043694:755171..756023 | Clytia hemisphaerica | exon |
| TCONS_00002156-exon-sc0000018-1575043694:754157..755089 | TCONS_00002156-exon-sc0000018-1575043694:754157..755089 | Clytia hemisphaerica | exon |
| TCONS_00002156-exon-sc0000018-1510915933:755171..756023 | TCONS_00002156-exon-sc0000018-1510915933:755171..756023 | Clytia hemisphaerica | exon |
| TCONS_00002156-exon-sc0000018-1510915933:754157..755089 | TCONS_00002156-exon-sc0000018-1510915933:754157..755089 | Clytia hemisphaerica | exon |
| TCONS_00002156-exon-sc0000018-1491911889:755171..756023 | TCONS_00002156-exon-sc0000018-1491911889:755171..756023 | Clytia hemisphaerica | exon |
| TCONS_00002156-exon-sc0000018-1491911889:754157..755089 | TCONS_00002156-exon-sc0000018-1491911889:754157..755089 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018 | supercontig | sc0000018:754157..756023 - |
Blast
The following BLAST results are available for this feature:
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