TCONS_00002173 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002173
Unique NameTCONS_00002173
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1554

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002173 ID=TCONS_00002173|Name=TCONS_00002173|organism=Clytia hemisphaerica|type=transcript|length=1554bp
GTTGAGAATTCGAGAAGATGGTCAGAAAAAtATTTGCCGTTTTGGCATTG
CTCGTTCACCAAACAATAGCTGCAGAAACTTGTTTTCGATCAAACTGCAA
AAAAGAAGGGAGTTCTGATTCGCTTACCATAAATCACGCGTCTTTCACTC
AAGTTCCCGATCAAAAGATTGACCCTGCTTGGCCAATCAACGAAACGTTA
CAAGTCTCGGGAACACAAGAAGAACGCATAAGAGCGTGCACTGAAAGATG
CACAAAGATAGGAATACATGGCTGCAGGAGTGGAAATCTGAGCCCTTATC
AAGAAAACGCACCGTCAACATgtgatttgtttacatatgGTATTTACGCT
CATAGTATTCATTTGGTTCCACTTTTGCGTATAGTGAGCACAGGATGGAC
CTCTTTTCACTTGTTTAATTCGTTTTGTGAAGGCTATCCATGTCAGAATG
GAGGAATTTGTTATCCGCATTTCCTCACTGATGAAGGTTATTGCAAATGC
ACAGGTTACTCTGGAACGCTCTGTCAAACTCTCGACCCGTTGCACCATGA
AGAAGCAGGTCATTGGACGTTCGATGATTACACTTTATCCAATACTGGAA
TTGGTGCAAATACACTCGCTACCAGTGAGAGTGGTGATGGAATAGTATTA
GAAACTCTTGAGCGAGATTCTCCTGTTCTTCAATGTCAAACAACAAATTG
TCTGACCATCGACAACACCAATATGCCTTGTTTGAAGGATTACACATCCC
CGTATGGATGCACCACTGGAGTGACTTTTGGTTTCTGGTTGCGACCTCTC
TGGAAAACAACAGGAGGATCATTCAATTACCTCATTCAGGGAAAAGCAAC
CAAACAAGGATTAACTTTTAATTCAGTTACCAACAGTGACATCCGTCTTC
ATATCGAAACATCAAGCACACGACACATGTGCACCTTACCATTTGCAACC
TATAAACCCAACTGGTTCAAAGCATGGACTTTTATTGCAGTGACCTGGGA
CCCTACAAACAGAAAATGGGAATGCATCATGGACAATCACATCATTCAAA
TAACAAGCTCATCAGTGACCTCATCTTCGAATGGTCCGATCGTTTTCGGC
AATCAAGGAAGCGATGAAACTAAATTTTTGATAGACGATGTCGTATACTA
TCCTCTGTATTCAACTCCCGAAATGATTTCTGCTGTAATGGACTTGACGA
AATCAGGACGAAATTAATGGTAACAAACTAAATGAAGCGGCATAAAGgaa
attctttaaaacaatATACCAGAAAAAGTTCATTTGAAGTCATCCAATAA
GCTGGATAAAGACAAAATGTGTGAAGGAGAAAACATTGGATCGATTGTTA
CATTTGTTTTGGACAGAAAGAGGCCCATctgattgggcttttccagaaat
agacCATGCCAAAAACCGTTAACCCCCtagatatccgatatcctcaattc
ctcaattcacgcagaagatgcaatttttggtcaattttagaccaaaatgt
ggcgaaaagtggaacttgcgcatgaaatatctcgagttaggtaatgaaat
cggc
Run BLAST on NCBI

transcript from alignment at sc0000018:940959..956520-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002173 ID=TCONS_00002173|Name=TCONS_00002173|organism=Clytia hemisphaerica|type=transcript|length=15562bp|location=Sequence derived from alignment at sc0000018:940959..956520- (Clytia hemisphaerica)
GTTGAGAATTCGAGAAGATGGTCAGAAAAATGTAAGATTTTTAAATTTTT
CGCTCGATTACCCTTTAGAATAATTTACAAAAATTCATAAGTCACAGCCA
TAACAAATTAGTTGATTCTGTCTGTAGACCTTATCGGAGTTTTTCATTTT
TCTAAAAAAGCGATGCACTGTGGGATTGTTTCGAGTGTATTACAATAGAA
TTCCCTCGAGGAATTCCTATAGATTTCTATTGTAATAAACTCGAAATAAA
ACGTTAGACTCTATCAAAATTGTGAAAAAATCTCAGTTTGTGACGTCAGT
GTTCGAGTCGTATGTAAAGCAAACCATTATAAGGGTGTATTCGATCAGTG
TGTAACACAACGCTGAAATGCTGAAATGCTAAAAAAATGATAGTGGTGAC
GCCATAACCTGAACCTTTTATGATATTGATGAAGTCCAAAATCATTCACT
ATTAATTTGAAGACTTTTTAAGCTCCCTTCAATGTGTTTAAATGATCAAA
ATAGATGAAAATGGGCAAAAATAGCAATTTTTACCCCCTGAAACCCTGAA
AATTGCCAATGATGACGTCACAAACTGAGATTTTTTCACAATTTTGATTG
AGTCTAACGTTTTCCATATTTTTAAGGAGTTTTTAAAGATTTTGAAAGTT
TTCAAATTGGTTTAAATGGTCAAAACAGGCCAAAAATAGGCAAAAATGGC
TGTTTTTTGCCCATTTTTGTTCAGACAAACCCCCGGAAATTTCTTTTCGA
AAAAATTAATTTTTCAAATAGTTGTTCTACTTATTTTGAGTATTTCTGCA
AAATTTCAAGTCATTTTCTTGGCTAGTTCAAAAGATATTGTCTGATGTTG
TTGACAGGAAAACGGCTTCTCCATAGTATTTCTTACCCTGGCGCTTTAGG
ACCCCCTACTTCAGACCCTCTGGAGACCAAAAGCCCCCTCTAAACGCTAT
TTACCTTTCGATTCCATAAACAAGTGAAGTTAAGCAACACGAAAATCGTA
TTGTAATTTAGGACCCCCCTAGGTGGTGCTACCCCGCACTCAGGAGCTGG
TCTATATTCTGTTCTATTTTTTAATTTCTCGTTTGCTTTTTTTTCCGATC
GGTCGAATCACTACCCCCTGGTTTTAACAATCTTTAAACCGAGCGATTTT
CAACATTTTCAGAGCGGGTTACAGAAAAAAAATTTATAGTTATTAGTGCT
CTTGACAAATAACAATTCAACATTACATCTTGTTAACCGGTTACTTTTTC
GAAGCGGGCTACATGGCTTTTTGCGCAATGCAATTGGTTCGTTTCGCATG
ACGACGGGCCTACATTGTCCAGAGTTGCCCGTCGTTAGGAAAATTCATTG
TGACGTCACTTTTTCAAAGGAAAATGAACAATGCGTTGACATCATTTCTC
TCATTTTTTATTTCTGACGTCAGAAATTATAGCAATTTTTTATCTCTTTT
CGCTTGTTTTTTCTGCTTTATTTCGCTATTTTTCCTGGATAAAGCGCTAA
AAATCAATCAAAGTTGAAGGAAACGGTTAACAAATACAATAATGACCGGT
TTTTTCGGGCTGTACTGAAAATATTGCCCTCGGTCCACGCAACAACCTCG
CAAGCTCGGTCGTTACTTGACCTCGGGCAATATTTCTCAGTACAGCCCTC
ACTAACCGGTCATTATTGTATTAATAATCATTATAAAAAAACCCTGGTCT
GATAATGCATTTTTTTAGCTTTATTGTCAAATTTTCTTTTATTGTAAATA
AAAGGCGAGTTGCGATTTGCATACTTTTTGATCACGTTACCATTTTTGAC
TCTTGGGATTGGTTTATTTCCTAGTCGCATGATCAAAAACTATACAAAAA
CAATCTATTTAAGGGCTCTGACCATAGTGAATTTTTCATAATTGCCGTGT
TTAAAATGTGTTTTCTGACTGATGTAACCAACAAAACTATGACATGTTAT
ACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCAAAAATTGCATTGAAAAA
ATTTGATGAAGAAGAAAATGAAGACTTTTGCGAGGAAGATTATTTCAACT
TTGAAGAGCTTAGTTTCGGCAAAGAAAAAACATTTTGAAAATTTTTTCGC
AGTAGATGGTGTATCTTTTACCGAACAATAAAAACTTTTGCTGAAAATTT
TTGTAAATGCTTCTTTGTCTCGAAATCTTCAAAATAGTGGTTTTTCATCA
ATTTTTCATCTGGATTTTGCTTAAAAAACAGTCATAACTTTTGACACATC
TTTTTAGAAAAATTTTCCGCAAAATTTAAAATAGTTCAATTCTTTGCGGA
CAGTGTAAAGACATTTTGAAACAAAAAGTTTAATTACCCATTAAAACTTA
GCACTTTTTATAAAAGAAGGTGATGCAACATATTATCAACGTCTTTTTAA
AGTTCATAACGTCATTTCTACAATTAAATTCTTAATTACTCTGCAATTTA
TAAATGTAATTCTTTGTTGAAAGTGTTGAAAGAACCTAAAACATAACTTT
TATGTTCAAATACTAAAATCAATTTTCCGACTATGGTCAGAGCCCTTAAG
GGGAAAAAACTAACTTTTATAGCTGTTACTTTAATGGGATAAACGACAAA
ACGACGATAGAAATTTTGAATTTTTGCGAATCGAAAAAAGATTTCAAATT
TTTCGCAGGTATTTGATTTCACAGAGGCCCTTCCGAAATTTCCATTGGGA
CTTATTAATCTCACAGATTTTCGCGAAATTTAATCTTCGCGAAAGTTTAT
CCCATTAAAGTAACAATAGAAAGAAAAAAAGCACTCCAGACCGGTTTTTT
TTCATAATGACTATGCTGACATGGTATTCAAATGAAAAATACTCTCTCCT
ACTCTTAAAAATAGATTTGCCGTTTTGGCATTGCTCGTTCACCAAACAAT
AGCTGCAGAAACTTGTTTTCGATCAAACTGCAAAAAAGAAGGGAGTTCTG
ATTCGCTTACCATAAATCACGCGTCTTTCACTCAAGTTCCCGATCAAAAG
ATTGACCCTGCTTGGCCAATCAACGAAACGTTACAAGTCTCGGGAACACA
AGAAGAACGCATAAGAGCGTGCACTGAAAGATGCACAAAGATAGGAATAC
ATGGCTGCAGGAGTGGAAATCTGAGCCCTTATCAAGAAAACGCACCGTCA
ACATGTGATTTGTTTACATATGGTATTTACGCTCATAGTATTCATTTGGT
TCCACTTTTGCGTATAGTGAGCACAGGATGGACCTCTTTTCACTTGTTTG
TAAGTAAATCTATTGCAGTTTTTTTTCACTTGGTTTCACATGTCGTCTCC
TATGAATCCTTCGTTTTTGTATACCATGGGCAAAATTAATTTAGACCACT
TATTTAATGTTTGGACCGTGGTTCAATTTGCTAAGAAGTAACTAACTAAG
AATGTACTTCTGTAGTGCCAAAAAGAACCCATTAAGTACCACTGGCATCA
TAATGGGATTGCTTGTTTTTTACATATTGTTTCATTTTGAAGTTAGGTGG
TGATTACCATAATGGAGAGAAGTGAACTGAATTTGATCATTTTTACCGTA
GAATTCGTTTTGTGAAGGCTATCCATGTCAGAATGGAGGAATTTGTTATC
CGCATTTCCTCACTGATGAAGGTTATTGCAAATGCACAGGTTACTCTGGA
ACGCTCTGTCAAACTCTCGGTAAGCTCCTTTGTCTTTGACTGCACCTTGG
ATAGCCAAAGAACACCTTGGCTTTCATCACCCTAAGTGAAATTTAACCCT
ATTACTCTCGGGTACCTAATAGCCTGGGGGGGGTGGGGGTTCGGAATAAG
CGAAATTAGGGCAAAAGAGGGAGCTTTCAAAAACATTTTCCCAAAAATTA
ATAAGCGGGGGGGGGAGGGTTGGAATAAAAATGTCCTGGGTGGAAAATTT
TCGAAAAATTAATTAGCAGGGGGACGGCTATTAGGTACCCGAGAGTAACC
CCAGGGGGGTAGAATCTACACATTTATGTATATCTCAGAGCCATTTTTTT
AAACGACTTGAAACTTTTTGACTTTCAATAAAATCTTATTAAGAGTACAT
GTGTAAAATTTTAGGGTGAATCAGGATTTATCAGGTTTTATGACTTATAT
TGTGAAACATGACATAAAACCTAGCTAAAATCGCTTAAAACACAATATTT
CATATTCAATAATTTTCAAATTTTGACACGTGATAGGCATTAATAATATA
AATTTGAAAAAATAAAATTTCTTGTTTGAAAATCATGACGTCAACATTTA
TGACGTCATCAAATTTTGAAAATCTTACTCATCTTCAGCATAGATTTTTA
AGAAAAAATCTTTATGGAGAATGCAAAACTGGCAATTATGTTAAAGGGCA
GCCTTTTATCTTTCAGAATCTTCAAACAAAATGTAAATACCTTCATTGTT
CGACTGTGACAGACACTTTTGTAAACCATATATTTCGATTTTTTCCGACA
GGTGGAAATTTTGTGACGACGCCATCACTTTTTGAGTTACGTTATGGAAT
TCTTTTTTCTTCCTTGAAATTTGTGTCATGATGGAAAACATCCGTACTGT
AATTTCATGACCATAGCACTTCTAGATAAAAAATAATCAAGGAAAATCAT
AAAGACTGATGAAAAAACCAAACTTTTACGCCCGTATACTCGTGTGTAGA
ATATGGTTCAAATGAGGAATAAATAAAAGGATCTACAATTCCAATTTGTT
TCATTCCTTTTCATCAAGATCTGTGATTTCTTTCAACCATAGACCCGTTG
CACCATGAAGAAGCAGGTCATTGGACGTTCGATGATTACACTTTATCCAA
TACTGGAATTGGTGCAAATACACTCGCTACCAGTGAGAGTGGTGATGGAA
TAGTATTAGAAACTCTTGAGCGAGATTCTCCTGTTCTTCAATGTCAAACA
ACAAATTGTCTGACCATCGACAACACCAATATGCCTTGTTTGAAGTAAGA
ATAAACAGGCATTCTTTTAAATGGAAATGTCATACTTATAAGAAAAGTAG
TAGCGTTTTGGTAAACTATGATTCGGGGCGAAACTGTTTATGTAACAAAA
CATTTTAATGAGTTAAACTCAGGGGAAAGGGGGTTCAATCAAGAAAAACG
TTCTGCTGGCCAGGGTCCGATATAGAATCTGAGAGGGTCAACTTTTGATT
ATTTCGGACAATTTTCAGGGTGGAAATTAGGAAATTTTTTGATTTTGCAT
CTTCTTATAGTCAATTTTGACTACTTTTATAGGGTGAAAATTGGATTATT
TTAGCTTGTTTTGATAGGGTCTCTAATTTACCAAACATGTACATTTGACA
GGGGGTACAATCAAAGTGATAACTCTGAGTTCTAACGCTAGACTTAAGAC
TTAAGGTGCTTAGGATCTGAGGAACTAAAAGTCCAAGAATGGTTCAATAG
GGCTCAGAATATAGCCTGGAAGTCTATAAACCCTCCCGAATTGACATATT
CGAATAAACTTATCAATTTTTCCGAAAGCAATTTTTTCGCCCGAACTTTA
AATTGCTGAAAACGAGGAATTAACCAAATTCGAACCAAAATTCCCAATAT
ATTTTGACCGAGATTGTACTTTCCAAACTCTAGAGGCACCTCTCCGTCGG
CTTTTAAGGTCGGTTACCCCATCCCCCAGTGCCTGTGTATCTCTTAAAAT
GATGTAATTTATGCATTTTATAATTTTTCATTCTGATGAATAGCATACCG
CAGTAATTCTAAAAACAAACATCAAAATTACTGTGGCTGTTTTTCCGGCG
GCTTAAACTAACAGGATTAACAGGATTAACAGAAGGTGTAATAAAACGCT
GAATAGCCCAAAACTAGTCATATAAGCTGTGGATGAAAAGAGATAGTTAT
ACACGTTTATGTTTTCTTTTGTAAAAAATAATTTCATCTCCCACGGCAAA
TCTTTTGTATTTCCTGATCCACCTATCCTCGCTCTTTTTTTCTCTCATAC
ATGCCCTCGACCATGTATTAGTGGATTAGAAAATTATATGAATAGTTTGG
GGTATTTTTCCACTGACGGCTTAAGCTAATTGGATTAATGTAACTTTTTG
ATAAAATGATGAATAGCCAAACCAGCTCAAACTTATTCATAAAAATTTTG
GACGAAAAGAGATGGTTACACGTTAATTTTTTTTTTAAGAAAAATATTGT
ATTTCCCAAAGCAACACAGAAGAAAAACCGTTCGTGTCCGGAAAAAAGTA
TCGAGTCGTATCACTTCTACAGGGTGTCCCTAATTAAAGTATCGAGTCGA
AACACAACTATGAGTAGCAAGTTTTATGTGCATGTTCACAAAATTGTATT
TTAAGCTCTCCCTCTTTTTTCTTTGTCATTACGATTAATTTATACGTTGT
AACTACCTTTTGTAATAAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTATTTCATATTCAATAATTTTCAAAT
TTTGACACGTGATAGGCATTAATAATATAAATTTGAAAAAATAAAATTTC
TTGTTTGAAAATCATGACGTCAACATTTATGACGTCATCAAATTTTGAAA
ATCTTACTCATCTTCAGCATAGATTTTTAAGAAAAAATCTTTATGGAGAA
TGCAAAACTGGCAATTATGTTAAAGGGCAGCCTTTTATCTTTCAGAATCT
TCAAACAAAATGTAAATACCTTCATTGTTCGACTGTGACAGACACTTTTG
TAAACCATATATTTCGATTTTTTCCGACAGGTGGAAATTTTGTGACGACG
CCATCACTTTTTGAGTTACGTTATGGAATTCTTTTTTCTTCCTTGAAATT
TGTGTCATGATGGAAAACATCCGTACTGTAATTTCATGACCATAGCACTT
CTAGATAAAAAATAATCAAGGAAAATCATAAAGACTGATGAAAAAACCAA
ACTTTTACGCCCGTATACTCGTGTGTAGAATATGGTTCAAATGAGGAATA
AATAAAAGGATCTACAATTCCAATTTGTTTCATTCCTTTTCATCAAGATC
TGTGATTTCTTTCAACCATAGACCCGTTGCACCATGAAGAAGCAGGTCAT
TGGACGTTCGATGATTACACTTTATCCAATACTGGAATTGGTGCAAATAC
ACTCGCTACCAGTGAGAGTGGTGATGGAATAGTATTAGAAACTCTTGAGC
GAGATTCTCCTGTTCTTCAATGTCAAACAACAAATTGTCTGACCATCGAC
AACACCAATATGCCTTGTTTGAAGTAAGAATAAACAGGCATTCTTTTAAA
TGGAAATGTCATACTTATAAGAAAAGTAGTAGCGTTTTGGTAAACTATGA
TTCGGGGCGAAACTGTTTATGTAACAAAACATTTTAATGAGTTAAACTCA
GGGGAAAGGGGGTTCAATCAAGAAAAACGTTCTGCTGGCCAGGGTCCGAT
ATAGAATCTGAGAGGGTCAACTTTTGATTATTTCGGACAATTTTCAGGGT
GGAAATTAGGAAATTTTTTGATTTTGCATCTTCTTATAGTCAATTTTGAC
TACTTTTATAGGGTGAAAATTGGATTATTTTAGCTTGTTTTGATAGGGTC
TCTAATTTACCAAACATGTACATTTGACAGGGGGTACAATCAAAGTGATA
ACTCTGAGTTCTAACGCTAGACTTAAGACTTAAGGTGCTTAGGATCTGAG
GAACTAAAAGTCCAAGAATGGTTCAATAGGGCTCAGAATATAGCCTGGAA
GTCTATAAACCCTCCCGAATTGACATATTCGAATAAACTTATCAATTTTT
CCGAAAGCAATTTTTTCGCCCGAACTTTAAATTGCTGAAAACGAGGAATT
AACCAAATTCGAACCAAAATTCCCAATATATTTTGACCGAGATTGTACTT
TCCAAACTCTAGAGGCACCTCTCCGTCGGCTTTTAAGGTCGGTTACCCCA
TCCCCCAGTGCCTGTGTATCTCTTAAAATGATGTAATTTATGCATTTTAT
AATTTTTCATTCTGATGAATAGCATACCGCAGTAATTCTAAAAACAAACA
TCAAAATTACTGTGGCTGTTTTTCCGGCGGCTTAAACTAACAGGATTAAC
AGGATTAACAGAAGGTGTAATAAAACGCTGAATAGCCCAAAACTAGTCAT
ATAAGCTGTGGATGAAAAGAGATAGTTATACACGTTTATGTTTTCTTTTG
TAAAAAATAATTTCATCTCCCACGGCAAATCTTTTGTATTTCCTGATCCA
CCTATCCTCGCTCTTTTTTTCTCTCATACATGCCCTCGACCATGTATTAG
TGGATTAGAAAATTATATGAATAGTTTGGGGTATTTTTCCACTGACGGCT
TAAGCTAATTGGATTAATGTAACTTTTTGATAAAATGATGAATAGCCAAA
CCAGCTCAAACTTATTCATAAAAATTTTGGACGAAAAGAGATGGTTACAC
GTTAATTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAACTACCTTTTGTA
ATAAGCCTGTGTGATGGAGAACGTTCTTATATTTTAGCGATAACACACAC
AAACTTTTCTACTCAATCGCATGTTCAGACTCGATACTTTAATTAGGGAC
ACCCTGTATAAAAAGAAAGTTCATATATGTGTTTCACTAAATTTGCAATG
TTTATCAAAGTTTATCTTTTTGTCATATTAATTGTCAGGAGACATATTTG
ATATGAATAACTTTACAAAATACAATTCTAAATAACTTTAACGTCATAAA
AATTGTAAAGAAAGTAAATTCTTTTTAATCATAATGACTGTTGTAAAAAC
AATTATTGTGTTGGTATATATTGTCTTACATTTTGTTAAACACAACAACA
ACCTTCTACTCCGAATCATGTTCGAACTCGATACTTTTTTGCGGACACCC
TGTACATGGTCGAGGGCGTGTATGAGAAAACAAAAGAGCGAGGATAAGCG
GATCAGGAAATACAAAAGATTTTTCGGTTTTCTCATGTGGCTGCATTTAG
ACCAGCCTGGCATTTGTAATTGCTGGCAGTATTCTTTTGAATTCTATTGT
TCCGCGCAATTGTTCGGTTTTTCAAATGCCTAATGATGCCAGCGTGTTGG
CATTTGAAATGCCATTTTGAGCAAAGGAATCCCCTTTTCTGGCATTTCAA
ATCAAACAAAGGAACCAAAACAAAGAGAAAAAATGACATTTTTGATTTTT
TAAAGTATTTGCACGTTTTTTATTCAGTTCTTTCTATAGATTGTAAAAGT
TGCAAGATTTGCCATAGCCTAGCCCTACGGCAAAAAGTTTCAGTTTTAAT
GACTGCAGTTTTTGAGAAATTTCATGCTTTTCATTGTTTGATCTGTCAAA
GTTGAACTTAAGGGAATCACCTTTTCAGTAATGACTCTAAAAAGACGATT
CCTTAAATGCCATGACAGAAAATACAAGTAATAACTTGCACGAATCAAGA
CGAAAAGGATTGTGGGATTGAATTTCGGTCAACTGTTAAAAGTAATAATT
ATGACGTTTGTATAGCGGTGTGCTATTGAAATCTTTCTCATATGACATAT
GTTAGAGTGTTCTGTGGGTCACATATACTTCACGCACAAATAATTCGAAA
GAATATAACACTCAAAAAGAGCTCTCTTTATCCTTTTACAATAGGGATTA
CACATCCCCGTATGGATGCACCACTGGAGTGACTTTTGGTTTCTGGTTGC
GACCTCTCTGGAAAACAACAGGAGGATCATTCAATTACCTCATTCAGGGA
AAAGCAACCAAACAAGGATTAACTTTTAATTCAGTTACCAACAGTGACAT
CCGGTAAGATATCAAGATTCCCTAAAATTCCTACAGCAAGTATCACAAGT
ATACTACACTGTGACGACGAACCACGATTCTTTTGAGCACGCATCCAACA
AACGAGATTAAAAGTCAGTCCTGGCAGTTTAGATTTCAGGTATCCCCTTT
GTTGAGTAGGTCTATTTTGGGAAAATAAACCCTCTGGATTGTTTTTTCAT
TTTTTCACATGAATTAGTTTTTCTCATTCTATGACTACCTTGGATTTTTC
GACCTTGTTTTACTGACCACCCTGGGTTTTCAACCTCATTTTACTGACAT
CCCTGGACTTTTACACTTGAAAAACTACCCCTTTGGATTTTTAAGAACAC
TCTACTCGTCACACCTCCTCAACATAGGAGGGTACCAGACTATTTCTCAA
ATAACCCATTATGTGTCACAACACTTTGCAACTAACACCATGGATTTCTA
AATTCAAGGACGGTAGCAGATGTCCTTTGACGTAAAAATCCTATGGCCTC
AAAATATAGATGTCCCTGTATTGTGACGTCAATTGGTTTACAAAAATCTA
ATTTTAAATTGGCATGATTTTTATCACTGATAGATGTTGATACAATACTT
AAACCCTTTTGGCAACTGCTTGGCAAGCAGTATTAGCATCGTCAAAAGAG
AGCCAAGGGACTAGGTCCGAGTTTGTGAATTTCAAAGAAATTTTTGTTGG
GTGATTTCGGTCATCGTTTATTAGGGGAAAAATTGACGAAATGACGTAAC
CAAATCCCAGCTGACATAGAATGTCCATCTAATGTCAACTTGACGTCCCT
AACGTCCGTATAACGTTAAATGAACGTTCAAACAACGTTGTGTTATTGTT
GGGATTGAAACTCCGCTACTCTATACTTACTTTGTACCAGAGTGTATCTC
AAGTATATCGTTTGGTACTCTATGCGCATTGTCTTTCTGAAAATAATTTC
CGTACGGAAACTTCTGTGCTGAAGGAGATATCGGGTCTGTGTACGGACTA
CTATACACTAATTCTGTTTCATAGTCTTCATATCGAAACATCAAGCACAC
GACACATGTGCACCTTACCATTTGCAACCTATAAACCCAACTGGTTCAAA
GCATGGACTTTTATTGCAGTGACCTGGGACCCTACAAACAGAAAATGGTG
AGTGATTTTGGAGACGTCAGGTTTAGCAATAACAACAGATAGATACTTTA
ACAAGACAAATTTTAAGAGGTTTAATTTTGCGTTTTGGCGGAAATTAATT
ACAAGTAAGTAATTTTAGTAGTAGCCTTATAAAGCAATGCGAGTGAAGAT
GATTCTCGTCATGATATCTTCACATCACTCAAAATGTATCTCTCACAGTT
GATGATTATACATTTCACGATAGAAAAAATTAACTCCAGTCGGAATAGAC
ACTCGATCTGAAAACTACCATACACGTTTTTTGTTTATAAGAACATCCAA
AATTTTTGAAGCCTGCGGATGTTCTTAACTTTTTGAGTTTTGAGCCTAAA
AACTTTCTTAGCATGTTCTTATTTTCAATATTTTTTAGGCATTTTTGTCC
CATATTCCTAAGAAACTGGGAAGAGCCCCAAAAGCCTTAAAATGTTCTCA
ACTTGTTCTTAACATTTTGGCCATCGAAGCCTTATGTTCTTATATAGTTT
GTTCTTATTAAAAAAAGTGTATGTGCGAATAAAAAGATGAGAATGTATTT
TTAGAGTAGCATTTCGTTGTTTCTAAATAGTGTTTATAAATAGACCTTAT
CGGAGTTTTTGATTTTTCTAAAAAAGTAATGCATTGTGGGATTGTTTCGA
GTGTATTACAATAGAAATCTCCTAGGAATTCCTCGAGAGAATTCTATTTT
AATACATTCGAAACAATCCCACAATGCATCGCTTTTTTAGAAAAATCAAA
AACTCCGATAAGGTCTATTGTCGGACTTTCTTTCTTTTTATGTCAATCAG
GGAATGCATCATGGACAATCACATCATTCAAATAACAAGCTCATCAGTGA
CCTCATCTTCGAATGGTCCGATCGTTTTCGGCAATCAAGGAAGCGATGAA
ACTAAATTTTTGATAGACGATGTCGTATACTATCCTCTGTATTCAACTCC
CGAAATGATTTCTGCTGTAATGGACTTGAGTAAGTACTGTAAATAATTGG
CCATCCCAGTTCCTTAGTTCACTTACGAAAATTTATGTCGCAAATTAAAT
TGCATCAGCCCCCCCCCCCCCTTAAAGGGGTTTTTTAAAACCAAAACATT
TTGAGAAACTTTGAAGTTAAGAAAGCAGAATTAAGTCTCTAAGTTAAACA
TTTCGCAATCACAAACCTACACTATTTTCCAATTGTGCGCCTTCAGGCCC
GAGACTTCAGCCTCCCAACTTTGAGAAAATGAATTTTTTTTCTCAAATAT
CTAGCGAATTTATCTCGTTTTGAGCCTTCAGCCTTCCAAATTTTATGGTT
GTACCGCTGGGTCTGGGCCTTATACTTATCTAATTTATTTCCTTGTCATT
TTCAGCGAAATCAGGACGAAATTAATGGTAACAAACTAAATGAAGCGGCA
TAAAGGAAATTCTTTAAAACAATATACCAGAAAAAGTTCATTTGAAGTCA
TCCAATAAGCTGGATAAAGACAAAATGTGTGAAGGAGAAAACATTGGATC
GATTGTTACATTTGTTTTGGACAGAAAGAGGCCCATCTGATTGGGCTTTT
CCAGAAATAGACCATGCCAAAAACCGTTAACCCCCTAGATATCCGATATC
CTCAATTCCTCAATTCACGCAGAAGATGCAATTTTTGGTCAATTTTAGAC
CAAAATGTGGCGAAAAGTGGAACTTGCGCATGAAATATCTCGAGTTAGGT
AATGAAATCGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001132XLOC_001132Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002173-exon-sc0000018-1575043694:956490..956520TCONS_00002173-exon-sc0000018-1575043694:956490..956520Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1575043694:953172..953556TCONS_00002173-exon-sc0000018-1575043694:953172..953556Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1575043694:952752..952869TCONS_00002173-exon-sc0000018-1575043694:952752..952869Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1575043694:948648..948849TCONS_00002173-exon-sc0000018-1575043694:948648..948849Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1575043694:943818..943976TCONS_00002173-exon-sc0000018-1575043694:943818..943976Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1575043694:942674..942796TCONS_00002173-exon-sc0000018-1575043694:942674..942796Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1575043694:941692..941870TCONS_00002173-exon-sc0000018-1575043694:941692..941870Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1575043694:940959..941315TCONS_00002173-exon-sc0000018-1575043694:940959..941315Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1510915933:956490..956520TCONS_00002173-exon-sc0000018-1510915933:956490..956520Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1510915933:953172..953556TCONS_00002173-exon-sc0000018-1510915933:953172..953556Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1510915933:952752..952869TCONS_00002173-exon-sc0000018-1510915933:952752..952869Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1510915933:948648..948849TCONS_00002173-exon-sc0000018-1510915933:948648..948849Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1510915933:943818..943976TCONS_00002173-exon-sc0000018-1510915933:943818..943976Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1510915933:942674..942796TCONS_00002173-exon-sc0000018-1510915933:942674..942796Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1510915933:941692..941870TCONS_00002173-exon-sc0000018-1510915933:941692..941870Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1510915933:940959..941315TCONS_00002173-exon-sc0000018-1510915933:940959..941315Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1491911889:956490..956520TCONS_00002173-exon-sc0000018-1491911889:956490..956520Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1491911889:953172..953556TCONS_00002173-exon-sc0000018-1491911889:953172..953556Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1491911889:952752..952869TCONS_00002173-exon-sc0000018-1491911889:952752..952869Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1491911889:948648..948849TCONS_00002173-exon-sc0000018-1491911889:948648..948849Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1491911889:943818..943976TCONS_00002173-exon-sc0000018-1491911889:943818..943976Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1491911889:942674..942796TCONS_00002173-exon-sc0000018-1491911889:942674..942796Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1491911889:941692..941870TCONS_00002173-exon-sc0000018-1491911889:941692..941870Clytia hemisphaericaexon
TCONS_00002173-exon-sc0000018-1491911889:940959..941315TCONS_00002173-exon-sc0000018-1491911889:940959..941315Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:940959..956520 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.184317	0.315573	0.326585	0.293245	0.0570121	0.0432833	0.0483619	0.336147	0.0863	0.116773	0.286899	0	0.134755	3.81107	2.96453	3.21962e-10	0.24247	0.24203	19.0335	4.13895	0	0	0.000181058	0.417836	0	0	0	0.0526277	0.180861	0.321147
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002173 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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