TCONS_00002174 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002174
Unique NameTCONS_00002174
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1560

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002174 ID=TCONS_00002174|Name=TCONS_00002174|organism=Clytia hemisphaerica|type=transcript|length=1560bp
TACATCGTTGAGAATTCGAGAAGATGGTCAGAAAAAtATTTGCCGTTTTG
GCATTGCTCGTTCACCAAACAATAGCTGCAGAAACTTGTTTTCGATCAAA
CTGCAAAAAAGAAGGGAGTTCTGATTCGCTTACCATAAATCACGCGTCTT
TCACTCAAGTTCCCGATCAAAAGATTGACCCTGCTTGGCCAATCAACGAA
ACGTTACAAGTCTCGGGAACACAAGAAGAACGCATAAGAGCGTGCACTGA
AAGATGCACAAAGATAGGAATACATGGCTGCAGGAGTGGAAATCTGAGCC
CTTATCAAGAAAACGCACCGTCAACATgtgatttgtttacatatgGTATT
TACGCTCATAGTATTCATTTGGTTCCACTTTTGCGTATAGTGAGCACAGG
ATGGACCTCTTTTCACTTGTTTAATTCGTTTTGTGAAGGCTATCCATGTC
AGAATGGAGGAATTTGTTATCCGCATTTCCTCACTGATGAAGGTTATTGC
AAATGCACAGGTTACTCTGGAACGCTCTGTCAAACTCTCGACCCGTTGCA
CCATGAAGAAGCAGGTCATTGGACGTTCGATGATTACACTTTATCCAATA
CTGGAATTGGTGCAAATACACTCGCTACCAGTGAGAGTGGTGATGGAATA
GTATTAGAAACTCTTGAGCGAGATTCTCCTGTTCTTCAATGTCAAACAAC
AAATTGTCTGACCATCGACAACACCAATATGCCTTGTTTGAAGGATTACA
CATCCCCGTATGGATGCACCACTGGAGTGACTTTTGGTTTCTGGTTGCGA
CCTCTCTGGAAAACAACAGGAGGATCATTCAATTACCTCATTCAGGGAAA
AGCAACCAAACAAGGATTAACTTTTAATTCAGTTACCAACAGTGACATCC
GTCTTCATATCGAAACATCAAGCACACGACACATGTGCACCTTACCATTT
GCAACCTATAAACCCAACTGGTTCAAAGCATGGACTTTTATTGCAGTGAC
CTGGGACCCTACAAACAGAAAATGGGAATGCATCATGGACAATCACATCA
TTCAAATAACAAGCTCATCAGTGACCTCATCTTCGAATGGTCCGATCGTT
TTCGGCAATCAAGGAAGCGATGAAACTAAATTTTTGATAGACGATGTCGT
ATACTATCCTCTGTATTCAACTCCCGAAATGATTTCTGCTGTAATGGACT
TGACGAAATCAGGACGAAATTAATGGTAACAAACTAAATGAAGCGGCATA
AAGgaaattctttaaaacaatATACCAGAAAAAGTTCATTTGAAGTCATC
CAATAAGCTGGATAAAGACAAAATGTGTGAAGGAGAAAACATTGGATCGA
TTGTTACATTTGTTTTGGACAGAAAGAGGCCCATctgattgggcttttcc
agaaatagacCATGCCAAAAACCGTTAACCCCCtagatatccgatatcct
caattcctcaattcacgcagaagatgcaatttttggtcaattttagacca
aaatgtggcgaaaagtggaacttgcgcatgaaatatctcgagttaggtaa
tgaaatcggc
Run BLAST on NCBI

transcript from alignment at sc0000018:940959..956526-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002174 ID=TCONS_00002174|Name=TCONS_00002174|organism=Clytia hemisphaerica|type=transcript|length=15568bp|location=Sequence derived from alignment at sc0000018:940959..956526- (Clytia hemisphaerica)
TACATCGTTGAGAATTCGAGAAGATGGTCAGAAAAATGTAAGATTTTTAA
ATTTTTCGCTCGATTACCCTTTAGAATAATTTACAAAAATTCATAAGTCA
CAGCCATAACAAATTAGTTGATTCTGTCTGTAGACCTTATCGGAGTTTTT
CATTTTTCTAAAAAAGCGATGCACTGTGGGATTGTTTCGAGTGTATTACA
ATAGAATTCCCTCGAGGAATTCCTATAGATTTCTATTGTAATAAACTCGA
AATAAAACGTTAGACTCTATCAAAATTGTGAAAAAATCTCAGTTTGTGAC
GTCAGTGTTCGAGTCGTATGTAAAGCAAACCATTATAAGGGTGTATTCGA
TCAGTGTGTAACACAACGCTGAAATGCTGAAATGCTAAAAAAATGATAGT
GGTGACGCCATAACCTGAACCTTTTATGATATTGATGAAGTCCAAAATCA
TTCACTATTAATTTGAAGACTTTTTAAGCTCCCTTCAATGTGTTTAAATG
ATCAAAATAGATGAAAATGGGCAAAAATAGCAATTTTTACCCCCTGAAAC
CCTGAAAATTGCCAATGATGACGTCACAAACTGAGATTTTTTCACAATTT
TGATTGAGTCTAACGTTTTCCATATTTTTAAGGAGTTTTTAAAGATTTTG
AAAGTTTTCAAATTGGTTTAAATGGTCAAAACAGGCCAAAAATAGGCAAA
AATGGCTGTTTTTTGCCCATTTTTGTTCAGACAAACCCCCGGAAATTTCT
TTTCGAAAAAATTAATTTTTCAAATAGTTGTTCTACTTATTTTGAGTATT
TCTGCAAAATTTCAAGTCATTTTCTTGGCTAGTTCAAAAGATATTGTCTG
ATGTTGTTGACAGGAAAACGGCTTCTCCATAGTATTTCTTACCCTGGCGC
TTTAGGACCCCCTACTTCAGACCCTCTGGAGACCAAAAGCCCCCTCTAAA
CGCTATTTACCTTTCGATTCCATAAACAAGTGAAGTTAAGCAACACGAAA
ATCGTATTGTAATTTAGGACCCCCCTAGGTGGTGCTACCCCGCACTCAGG
AGCTGGTCTATATTCTGTTCTATTTTTTAATTTCTCGTTTGCTTTTTTTT
CCGATCGGTCGAATCACTACCCCCTGGTTTTAACAATCTTTAAACCGAGC
GATTTTCAACATTTTCAGAGCGGGTTACAGAAAAAAAATTTATAGTTATT
AGTGCTCTTGACAAATAACAATTCAACATTACATCTTGTTAACCGGTTAC
TTTTTCGAAGCGGGCTACATGGCTTTTTGCGCAATGCAATTGGTTCGTTT
CGCATGACGACGGGCCTACATTGTCCAGAGTTGCCCGTCGTTAGGAAAAT
TCATTGTGACGTCACTTTTTCAAAGGAAAATGAACAATGCGTTGACATCA
TTTCTCTCATTTTTTATTTCTGACGTCAGAAATTATAGCAATTTTTTATC
TCTTTTCGCTTGTTTTTTCTGCTTTATTTCGCTATTTTTCCTGGATAAAG
CGCTAAAAATCAATCAAAGTTGAAGGAAACGGTTAACAAATACAATAATG
ACCGGTTTTTTCGGGCTGTACTGAAAATATTGCCCTCGGTCCACGCAACA
ACCTCGCAAGCTCGGTCGTTACTTGACCTCGGGCAATATTTCTCAGTACA
GCCCTCACTAACCGGTCATTATTGTATTAATAATCATTATAAAAAAACCC
TGGTCTGATAATGCATTTTTTTAGCTTTATTGTCAAATTTTCTTTTATTG
TAAATAAAAGGCGAGTTGCGATTTGCATACTTTTTGATCACGTTACCATT
TTTGACTCTTGGGATTGGTTTATTTCCTAGTCGCATGATCAAAAACTATA
CAAAAACAATCTATTTAAGGGCTCTGACCATAGTGAATTTTTCATAATTG
CCGTGTTTAAAATGTGTTTTCTGACTGATGTAACCAACAAAACTATGACA
TGTTATACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCAAAAATTGCATT
GAAAAAATTTGATGAAGAAGAAAATGAAGACTTTTGCGAGGAAGATTATT
TCAACTTTGAAGAGCTTAGTTTCGGCAAAGAAAAAACATTTTGAAAATTT
TTTCGCAGTAGATGGTGTATCTTTTACCGAACAATAAAAACTTTTGCTGA
AAATTTTTGTAAATGCTTCTTTGTCTCGAAATCTTCAAAATAGTGGTTTT
TCATCAATTTTTCATCTGGATTTTGCTTAAAAAACAGTCATAACTTTTGA
CACATCTTTTTAGAAAAATTTTCCGCAAAATTTAAAATAGTTCAATTCTT
TGCGGACAGTGTAAAGACATTTTGAAACAAAAAGTTTAATTACCCATTAA
AACTTAGCACTTTTTATAAAAGAAGGTGATGCAACATATTATCAACGTCT
TTTTAAAGTTCATAACGTCATTTCTACAATTAAATTCTTAATTACTCTGC
AATTTATAAATGTAATTCTTTGTTGAAAGTGTTGAAAGAACCTAAAACAT
AACTTTTATGTTCAAATACTAAAATCAATTTTCCGACTATGGTCAGAGCC
CTTAAGGGGAAAAAACTAACTTTTATAGCTGTTACTTTAATGGGATAAAC
GACAAAACGACGATAGAAATTTTGAATTTTTGCGAATCGAAAAAAGATTT
CAAATTTTTCGCAGGTATTTGATTTCACAGAGGCCCTTCCGAAATTTCCA
TTGGGACTTATTAATCTCACAGATTTTCGCGAAATTTAATCTTCGCGAAA
GTTTATCCCATTAAAGTAACAATAGAAAGAAAAAAAGCACTCCAGACCGG
TTTTTTTTCATAATGACTATGCTGACATGGTATTCAAATGAAAAATACTC
TCTCCTACTCTTAAAAATAGATTTGCCGTTTTGGCATTGCTCGTTCACCA
AACAATAGCTGCAGAAACTTGTTTTCGATCAAACTGCAAAAAAGAAGGGA
GTTCTGATTCGCTTACCATAAATCACGCGTCTTTCACTCAAGTTCCCGAT
CAAAAGATTGACCCTGCTTGGCCAATCAACGAAACGTTACAAGTCTCGGG
AACACAAGAAGAACGCATAAGAGCGTGCACTGAAAGATGCACAAAGATAG
GAATACATGGCTGCAGGAGTGGAAATCTGAGCCCTTATCAAGAAAACGCA
CCGTCAACATGTGATTTGTTTACATATGGTATTTACGCTCATAGTATTCA
TTTGGTTCCACTTTTGCGTATAGTGAGCACAGGATGGACCTCTTTTCACT
TGTTTGTAAGTAAATCTATTGCAGTTTTTTTTCACTTGGTTTCACATGTC
GTCTCCTATGAATCCTTCGTTTTTGTATACCATGGGCAAAATTAATTTAG
ACCACTTATTTAATGTTTGGACCGTGGTTCAATTTGCTAAGAAGTAACTA
ACTAAGAATGTACTTCTGTAGTGCCAAAAAGAACCCATTAAGTACCACTG
GCATCATAATGGGATTGCTTGTTTTTTACATATTGTTTCATTTTGAAGTT
AGGTGGTGATTACCATAATGGAGAGAAGTGAACTGAATTTGATCATTTTT
ACCGTAGAATTCGTTTTGTGAAGGCTATCCATGTCAGAATGGAGGAATTT
GTTATCCGCATTTCCTCACTGATGAAGGTTATTGCAAATGCACAGGTTAC
TCTGGAACGCTCTGTCAAACTCTCGGTAAGCTCCTTTGTCTTTGACTGCA
CCTTGGATAGCCAAAGAACACCTTGGCTTTCATCACCCTAAGTGAAATTT
AACCCTATTACTCTCGGGTACCTAATAGCCTGGGGGGGGTGGGGGTTCGG
AATAAGCGAAATTAGGGCAAAAGAGGGAGCTTTCAAAAACATTTTCCCAA
AAATTAATAAGCGGGGGGGGGAGGGTTGGAATAAAAATGTCCTGGGTGGA
AAATTTTCGAAAAATTAATTAGCAGGGGGACGGCTATTAGGTACCCGAGA
GTAACCCCAGGGGGGTAGAATCTACACATTTATGTATATCTCAGAGCCAT
TTTTTTAAACGACTTGAAACTTTTTGACTTTCAATAAAATCTTATTAAGA
GTACATGTGTAAAATTTTAGGGTGAATCAGGATTTATCAGGTTTTATGAC
TTATATTGTGAAACATGACATAAAACCTAGCTAAAATCGCTTAAAACACA
ATATTTCATATTCAATAATTTTCAAATTTTGACACGTGATAGGCATTAAT
AATATAAATTTGAAAAAATAAAATTTCTTGTTTGAAAATCATGACGTCAA
CATTTATGACGTCATCAAATTTTGAAAATCTTACTCATCTTCAGCATAGA
TTTTTAAGAAAAAATCTTTATGGAGAATGCAAAACTGGCAATTATGTTAA
AGGGCAGCCTTTTATCTTTCAGAATCTTCAAACAAAATGTAAATACCTTC
ATTGTTCGACTGTGACAGACACTTTTGTAAACCATATATTTCGATTTTTT
CCGACAGGTGGAAATTTTGTGACGACGCCATCACTTTTTGAGTTACGTTA
TGGAATTCTTTTTTCTTCCTTGAAATTTGTGTCATGATGGAAAACATCCG
TACTGTAATTTCATGACCATAGCACTTCTAGATAAAAAATAATCAAGGAA
AATCATAAAGACTGATGAAAAAACCAAACTTTTACGCCCGTATACTCGTG
TGTAGAATATGGTTCAAATGAGGAATAAATAAAAGGATCTACAATTCCAA
TTTGTTTCATTCCTTTTCATCAAGATCTGTGATTTCTTTCAACCATAGAC
CCGTTGCACCATGAAGAAGCAGGTCATTGGACGTTCGATGATTACACTTT
ATCCAATACTGGAATTGGTGCAAATACACTCGCTACCAGTGAGAGTGGTG
ATGGAATAGTATTAGAAACTCTTGAGCGAGATTCTCCTGTTCTTCAATGT
CAAACAACAAATTGTCTGACCATCGACAACACCAATATGCCTTGTTTGAA
GTAAGAATAAACAGGCATTCTTTTAAATGGAAATGTCATACTTATAAGAA
AAGTAGTAGCGTTTTGGTAAACTATGATTCGGGGCGAAACTGTTTATGTA
ACAAAACATTTTAATGAGTTAAACTCAGGGGAAAGGGGGTTCAATCAAGA
AAAACGTTCTGCTGGCCAGGGTCCGATATAGAATCTGAGAGGGTCAACTT
TTGATTATTTCGGACAATTTTCAGGGTGGAAATTAGGAAATTTTTTGATT
TTGCATCTTCTTATAGTCAATTTTGACTACTTTTATAGGGTGAAAATTGG
ATTATTTTAGCTTGTTTTGATAGGGTCTCTAATTTACCAAACATGTACAT
TTGACAGGGGGTACAATCAAAGTGATAACTCTGAGTTCTAACGCTAGACT
TAAGACTTAAGGTGCTTAGGATCTGAGGAACTAAAAGTCCAAGAATGGTT
CAATAGGGCTCAGAATATAGCCTGGAAGTCTATAAACCCTCCCGAATTGA
CATATTCGAATAAACTTATCAATTTTTCCGAAAGCAATTTTTTCGCCCGA
ACTTTAAATTGCTGAAAACGAGGAATTAACCAAATTCGAACCAAAATTCC
CAATATATTTTGACCGAGATTGTACTTTCCAAACTCTAGAGGCACCTCTC
CGTCGGCTTTTAAGGTCGGTTACCCCATCCCCCAGTGCCTGTGTATCTCT
TAAAATGATGTAATTTATGCATTTTATAATTTTTCATTCTGATGAATAGC
ATACCGCAGTAATTCTAAAAACAAACATCAAAATTACTGTGGCTGTTTTT
CCGGCGGCTTAAACTAACAGGATTAACAGGATTAACAGAAGGTGTAATAA
AACGCTGAATAGCCCAAAACTAGTCATATAAGCTGTGGATGAAAAGAGAT
AGTTATACACGTTTATGTTTTCTTTTGTAAAAAATAATTTCATCTCCCAC
GGCAAATCTTTTGTATTTCCTGATCCACCTATCCTCGCTCTTTTTTTCTC
TCATACATGCCCTCGACCATGTATTAGTGGATTAGAAAATTATATGAATA
GTTTGGGGTATTTTTCCACTGACGGCTTAAGCTAATTGGATTAATGTAAC
TTTTTGATAAAATGATGAATAGCCAAACCAGCTCAAACTTATTCATAAAA
ATTTTGGACGAAAAGAGATGGTTACACGTTAATTTTTTTTTTAAGAAAAA
TATTGTATTTCCCAAAGCAACACAGAAGAAAAACCGTTCGTGTCCGGAAA
AAAGTATCGAGTCGTATCACTTCTACAGGGTGTCCCTAATTAAAGTATCG
AGTCGAAACACAACTATGAGTAGCAAGTTTTATGTGCATGTTCACAAAAT
TGTATTTTAAGCTCTCCCTCTTTTTTCTTTGTCATTACGATTAATTTATA
CGTTGTAACTACCTTTTGTAATAAGCCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTCATATTCAATAATTT
TCAAATTTTGACACGTGATAGGCATTAATAATATAAATTTGAAAAAATAA
AATTTCTTGTTTGAAAATCATGACGTCAACATTTATGACGTCATCAAATT
TTGAAAATCTTACTCATCTTCAGCATAGATTTTTAAGAAAAAATCTTTAT
GGAGAATGCAAAACTGGCAATTATGTTAAAGGGCAGCCTTTTATCTTTCA
GAATCTTCAAACAAAATGTAAATACCTTCATTGTTCGACTGTGACAGACA
CTTTTGTAAACCATATATTTCGATTTTTTCCGACAGGTGGAAATTTTGTG
ACGACGCCATCACTTTTTGAGTTACGTTATGGAATTCTTTTTTCTTCCTT
GAAATTTGTGTCATGATGGAAAACATCCGTACTGTAATTTCATGACCATA
GCACTTCTAGATAAAAAATAATCAAGGAAAATCATAAAGACTGATGAAAA
AACCAAACTTTTACGCCCGTATACTCGTGTGTAGAATATGGTTCAAATGA
GGAATAAATAAAAGGATCTACAATTCCAATTTGTTTCATTCCTTTTCATC
AAGATCTGTGATTTCTTTCAACCATAGACCCGTTGCACCATGAAGAAGCA
GGTCATTGGACGTTCGATGATTACACTTTATCCAATACTGGAATTGGTGC
AAATACACTCGCTACCAGTGAGAGTGGTGATGGAATAGTATTAGAAACTC
TTGAGCGAGATTCTCCTGTTCTTCAATGTCAAACAACAAATTGTCTGACC
ATCGACAACACCAATATGCCTTGTTTGAAGTAAGAATAAACAGGCATTCT
TTTAAATGGAAATGTCATACTTATAAGAAAAGTAGTAGCGTTTTGGTAAA
CTATGATTCGGGGCGAAACTGTTTATGTAACAAAACATTTTAATGAGTTA
AACTCAGGGGAAAGGGGGTTCAATCAAGAAAAACGTTCTGCTGGCCAGGG
TCCGATATAGAATCTGAGAGGGTCAACTTTTGATTATTTCGGACAATTTT
CAGGGTGGAAATTAGGAAATTTTTTGATTTTGCATCTTCTTATAGTCAAT
TTTGACTACTTTTATAGGGTGAAAATTGGATTATTTTAGCTTGTTTTGAT
AGGGTCTCTAATTTACCAAACATGTACATTTGACAGGGGGTACAATCAAA
GTGATAACTCTGAGTTCTAACGCTAGACTTAAGACTTAAGGTGCTTAGGA
TCTGAGGAACTAAAAGTCCAAGAATGGTTCAATAGGGCTCAGAATATAGC
CTGGAAGTCTATAAACCCTCCCGAATTGACATATTCGAATAAACTTATCA
ATTTTTCCGAAAGCAATTTTTTCGCCCGAACTTTAAATTGCTGAAAACGA
GGAATTAACCAAATTCGAACCAAAATTCCCAATATATTTTGACCGAGATT
GTACTTTCCAAACTCTAGAGGCACCTCTCCGTCGGCTTTTAAGGTCGGTT
ACCCCATCCCCCAGTGCCTGTGTATCTCTTAAAATGATGTAATTTATGCA
TTTTATAATTTTTCATTCTGATGAATAGCATACCGCAGTAATTCTAAAAA
CAAACATCAAAATTACTGTGGCTGTTTTTCCGGCGGCTTAAACTAACAGG
ATTAACAGGATTAACAGAAGGTGTAATAAAACGCTGAATAGCCCAAAACT
AGTCATATAAGCTGTGGATGAAAAGAGATAGTTATACACGTTTATGTTTT
CTTTTGTAAAAAATAATTTCATCTCCCACGGCAAATCTTTTGTATTTCCT
GATCCACCTATCCTCGCTCTTTTTTTCTCTCATACATGCCCTCGACCATG
TATTAGTGGATTAGAAAATTATATGAATAGTTTGGGGTATTTTTCCACTG
ACGGCTTAAGCTAATTGGATTAATGTAACTTTTTGATAAAATGATGAATA
GCCAAACCAGCTCAAACTTATTCATAAAAATTTTGGACGAAAAGAGATGG
TTACACGTTAATTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAACTACCT
TTTGTAATAAGCCTGTGTGATGGAGAACGTTCTTATATTTTAGCGATAAC
ACACACAAACTTTTCTACTCAATCGCATGTTCAGACTCGATACTTTAATT
AGGGACACCCTGTATAAAAAGAAAGTTCATATATGTGTTTCACTAAATTT
GCAATGTTTATCAAAGTTTATCTTTTTGTCATATTAATTGTCAGGAGACA
TATTTGATATGAATAACTTTACAAAATACAATTCTAAATAACTTTAACGT
CATAAAAATTGTAAAGAAAGTAAATTCTTTTTAATCATAATGACTGTTGT
AAAAACAATTATTGTGTTGGTATATATTGTCTTACATTTTGTTAAACACA
ACAACAACCTTCTACTCCGAATCATGTTCGAACTCGATACTTTTTTGCGG
ACACCCTGTACATGGTCGAGGGCGTGTATGAGAAAACAAAAGAGCGAGGA
TAAGCGGATCAGGAAATACAAAAGATTTTTCGGTTTTCTCATGTGGCTGC
ATTTAGACCAGCCTGGCATTTGTAATTGCTGGCAGTATTCTTTTGAATTC
TATTGTTCCGCGCAATTGTTCGGTTTTTCAAATGCCTAATGATGCCAGCG
TGTTGGCATTTGAAATGCCATTTTGAGCAAAGGAATCCCCTTTTCTGGCA
TTTCAAATCAAACAAAGGAACCAAAACAAAGAGAAAAAATGACATTTTTG
ATTTTTTAAAGTATTTGCACGTTTTTTATTCAGTTCTTTCTATAGATTGT
AAAAGTTGCAAGATTTGCCATAGCCTAGCCCTACGGCAAAAAGTTTCAGT
TTTAATGACTGCAGTTTTTGAGAAATTTCATGCTTTTCATTGTTTGATCT
GTCAAAGTTGAACTTAAGGGAATCACCTTTTCAGTAATGACTCTAAAAAG
ACGATTCCTTAAATGCCATGACAGAAAATACAAGTAATAACTTGCACGAA
TCAAGACGAAAAGGATTGTGGGATTGAATTTCGGTCAACTGTTAAAAGTA
ATAATTATGACGTTTGTATAGCGGTGTGCTATTGAAATCTTTCTCATATG
ACATATGTTAGAGTGTTCTGTGGGTCACATATACTTCACGCACAAATAAT
TCGAAAGAATATAACACTCAAAAAGAGCTCTCTTTATCCTTTTACAATAG
GGATTACACATCCCCGTATGGATGCACCACTGGAGTGACTTTTGGTTTCT
GGTTGCGACCTCTCTGGAAAACAACAGGAGGATCATTCAATTACCTCATT
CAGGGAAAAGCAACCAAACAAGGATTAACTTTTAATTCAGTTACCAACAG
TGACATCCGGTAAGATATCAAGATTCCCTAAAATTCCTACAGCAAGTATC
ACAAGTATACTACACTGTGACGACGAACCACGATTCTTTTGAGCACGCAT
CCAACAAACGAGATTAAAAGTCAGTCCTGGCAGTTTAGATTTCAGGTATC
CCCTTTGTTGAGTAGGTCTATTTTGGGAAAATAAACCCTCTGGATTGTTT
TTTCATTTTTTCACATGAATTAGTTTTTCTCATTCTATGACTACCTTGGA
TTTTTCGACCTTGTTTTACTGACCACCCTGGGTTTTCAACCTCATTTTAC
TGACATCCCTGGACTTTTACACTTGAAAAACTACCCCTTTGGATTTTTAA
GAACACTCTACTCGTCACACCTCCTCAACATAGGAGGGTACCAGACTATT
TCTCAAATAACCCATTATGTGTCACAACACTTTGCAACTAACACCATGGA
TTTCTAAATTCAAGGACGGTAGCAGATGTCCTTTGACGTAAAAATCCTAT
GGCCTCAAAATATAGATGTCCCTGTATTGTGACGTCAATTGGTTTACAAA
AATCTAATTTTAAATTGGCATGATTTTTATCACTGATAGATGTTGATACA
ATACTTAAACCCTTTTGGCAACTGCTTGGCAAGCAGTATTAGCATCGTCA
AAAGAGAGCCAAGGGACTAGGTCCGAGTTTGTGAATTTCAAAGAAATTTT
TGTTGGGTGATTTCGGTCATCGTTTATTAGGGGAAAAATTGACGAAATGA
CGTAACCAAATCCCAGCTGACATAGAATGTCCATCTAATGTCAACTTGAC
GTCCCTAACGTCCGTATAACGTTAAATGAACGTTCAAACAACGTTGTGTT
ATTGTTGGGATTGAAACTCCGCTACTCTATACTTACTTTGTACCAGAGTG
TATCTCAAGTATATCGTTTGGTACTCTATGCGCATTGTCTTTCTGAAAAT
AATTTCCGTACGGAAACTTCTGTGCTGAAGGAGATATCGGGTCTGTGTAC
GGACTACTATACACTAATTCTGTTTCATAGTCTTCATATCGAAACATCAA
GCACACGACACATGTGCACCTTACCATTTGCAACCTATAAACCCAACTGG
TTCAAAGCATGGACTTTTATTGCAGTGACCTGGGACCCTACAAACAGAAA
ATGGTGAGTGATTTTGGAGACGTCAGGTTTAGCAATAACAACAGATAGAT
ACTTTAACAAGACAAATTTTAAGAGGTTTAATTTTGCGTTTTGGCGGAAA
TTAATTACAAGTAAGTAATTTTAGTAGTAGCCTTATAAAGCAATGCGAGT
GAAGATGATTCTCGTCATGATATCTTCACATCACTCAAAATGTATCTCTC
ACAGTTGATGATTATACATTTCACGATAGAAAAAATTAACTCCAGTCGGA
ATAGACACTCGATCTGAAAACTACCATACACGTTTTTTGTTTATAAGAAC
ATCCAAAATTTTTGAAGCCTGCGGATGTTCTTAACTTTTTGAGTTTTGAG
CCTAAAAACTTTCTTAGCATGTTCTTATTTTCAATATTTTTTAGGCATTT
TTGTCCCATATTCCTAAGAAACTGGGAAGAGCCCCAAAAGCCTTAAAATG
TTCTCAACTTGTTCTTAACATTTTGGCCATCGAAGCCTTATGTTCTTATA
TAGTTTGTTCTTATTAAAAAAAGTGTATGTGCGAATAAAAAGATGAGAAT
GTATTTTTAGAGTAGCATTTCGTTGTTTCTAAATAGTGTTTATAAATAGA
CCTTATCGGAGTTTTTGATTTTTCTAAAAAAGTAATGCATTGTGGGATTG
TTTCGAGTGTATTACAATAGAAATCTCCTAGGAATTCCTCGAGAGAATTC
TATTTTAATACATTCGAAACAATCCCACAATGCATCGCTTTTTTAGAAAA
ATCAAAAACTCCGATAAGGTCTATTGTCGGACTTTCTTTCTTTTTATGTC
AATCAGGGAATGCATCATGGACAATCACATCATTCAAATAACAAGCTCAT
CAGTGACCTCATCTTCGAATGGTCCGATCGTTTTCGGCAATCAAGGAAGC
GATGAAACTAAATTTTTGATAGACGATGTCGTATACTATCCTCTGTATTC
AACTCCCGAAATGATTTCTGCTGTAATGGACTTGAGTAAGTACTGTAAAT
AATTGGCCATCCCAGTTCCTTAGTTCACTTACGAAAATTTATGTCGCAAA
TTAAATTGCATCAGCCCCCCCCCCCCCTTAAAGGGGTTTTTTAAAACCAA
AACATTTTGAGAAACTTTGAAGTTAAGAAAGCAGAATTAAGTCTCTAAGT
TAAACATTTCGCAATCACAAACCTACACTATTTTCCAATTGTGCGCCTTC
AGGCCCGAGACTTCAGCCTCCCAACTTTGAGAAAATGAATTTTTTTTCTC
AAATATCTAGCGAATTTATCTCGTTTTGAGCCTTCAGCCTTCCAAATTTT
ATGGTTGTACCGCTGGGTCTGGGCCTTATACTTATCTAATTTATTTCCTT
GTCATTTTCAGCGAAATCAGGACGAAATTAATGGTAACAAACTAAATGAA
GCGGCATAAAGGAAATTCTTTAAAACAATATACCAGAAAAAGTTCATTTG
AAGTCATCCAATAAGCTGGATAAAGACAAAATGTGTGAAGGAGAAAACAT
TGGATCGATTGTTACATTTGTTTTGGACAGAAAGAGGCCCATCTGATTGG
GCTTTTCCAGAAATAGACCATGCCAAAAACCGTTAACCCCCTAGATATCC
GATATCCTCAATTCCTCAATTCACGCAGAAGATGCAATTTTTGGTCAATT
TTAGACCAAAATGTGGCGAAAAGTGGAACTTGCGCATGAAATATCTCGAG
TTAGGTAATGAAATCGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001132XLOC_001132Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002174-exon-sc0000018-1575043694:956490..956526TCONS_00002174-exon-sc0000018-1575043694:956490..956526Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1575043694:953172..953556TCONS_00002174-exon-sc0000018-1575043694:953172..953556Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1575043694:952752..952869TCONS_00002174-exon-sc0000018-1575043694:952752..952869Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1575043694:951477..951678TCONS_00002174-exon-sc0000018-1575043694:951477..951678Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1575043694:943818..943976TCONS_00002174-exon-sc0000018-1575043694:943818..943976Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1575043694:942674..942796TCONS_00002174-exon-sc0000018-1575043694:942674..942796Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1575043694:941692..941870TCONS_00002174-exon-sc0000018-1575043694:941692..941870Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1575043694:940959..941315TCONS_00002174-exon-sc0000018-1575043694:940959..941315Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1510915933:956490..956526TCONS_00002174-exon-sc0000018-1510915933:956490..956526Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1510915933:953172..953556TCONS_00002174-exon-sc0000018-1510915933:953172..953556Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1510915933:952752..952869TCONS_00002174-exon-sc0000018-1510915933:952752..952869Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1510915933:951477..951678TCONS_00002174-exon-sc0000018-1510915933:951477..951678Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1510915933:943818..943976TCONS_00002174-exon-sc0000018-1510915933:943818..943976Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1510915933:942674..942796TCONS_00002174-exon-sc0000018-1510915933:942674..942796Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1510915933:941692..941870TCONS_00002174-exon-sc0000018-1510915933:941692..941870Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1510915933:940959..941315TCONS_00002174-exon-sc0000018-1510915933:940959..941315Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1491911889:956490..956526TCONS_00002174-exon-sc0000018-1491911889:956490..956526Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1491911889:953172..953556TCONS_00002174-exon-sc0000018-1491911889:953172..953556Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1491911889:952752..952869TCONS_00002174-exon-sc0000018-1491911889:952752..952869Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1491911889:951477..951678TCONS_00002174-exon-sc0000018-1491911889:951477..951678Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1491911889:943818..943976TCONS_00002174-exon-sc0000018-1491911889:943818..943976Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1491911889:942674..942796TCONS_00002174-exon-sc0000018-1491911889:942674..942796Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1491911889:941692..941870TCONS_00002174-exon-sc0000018-1491911889:941692..941870Clytia hemisphaericaexon
TCONS_00002174-exon-sc0000018-1491911889:940959..941315TCONS_00002174-exon-sc0000018-1491911889:940959..941315Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:940959..956526 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000541067	0.00112678	0.000727498	0.00114965	0.000274298	0.000151145	0.000247641	0.000886789	0.000113696	0.000619621	0.00148884	0.0995051	8.40723	6.06349	0.00514683	1.96024	0.000696111	0.00047175	5.71915	13.068	0.562033	0.560477	4.75529e-07	0.000634742	0	0	0.106064	0.000168873	0.000503306	0.00184621
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002174 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top