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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002263 ID=TCONS_00002263|Name=TCONS_00002263|organism=Clytia hemisphaerica|type=transcript|length=492bp
GTTAGAAAACAAGGCGCTCAAGATCCAGAATTTTTGAGCAGAACAATTTT
GAACTGAAATTTTATCATGAGTTATCTATGCAATCTGTGTTTCATTGTAA
CATACTGTATAGGACTAACACGCGCATGTGTGATGAGTATTGGTGGAACA
TATTACGAGCGTAAACCAATTCAACAGGGTGTTTTCCCTNAACACGCGCA
TGTGTGATGAGTATTGATGGAACATATTACGAGCGTAAACCAATTCAACA
GGGTGTTTTCCCTGTACAGAACACATTTAGTACGTATGTAGGACAGTCAT
CTCGAAAATATGTGCACCAATTTTATACAAGCAGTGTGATACATTGTCTC
GGTGAATGCAGTAGATACAAAGTTGATGTCCTCATGGTAGGTTCGATGTG
TTCTTGCATTGCCAGTAGAAGCAGTTCAACCAATGATCAACTCTTTCGAT
CACCTGAAGGAAATAAACTAGATAGAGCCAATTTGATGGAAG Run BLAST on NCBI transcript from alignment at sc0000019:609674..612016+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002263 ID=TCONS_00002263|Name=TCONS_00002263|organism=Clytia hemisphaerica|type=transcript|length=2343bp|location=Sequence derived from alignment at sc0000019:609674..612016+ (Clytia hemisphaerica)
GTTAGAAAACAAGGCGCTCAAGATCCAGAATTTTTGAGCAGAACAATTTT
GAACTGAAATTTTATCATGAGTTATCTATGCAATCTGTGTTTCATTGTAA
CATACTGTATAGGACTAACACGCGCATGTGTGATGAGTATTGGTGGAACA
TATTACGAGCGTAAACCAATTCAACAGGGTGTTTTCCCTNAACACGCGCA
TGTGTGATGAGTATTGATGGAACATATTACGAGCGTAAACCAATTCAACA
GGGTGTTTTCCCTGTACAGAACACATTTAGTACGTATGTAGGACAGTCAT
CTCGAAAATATGTGCACCAATTTTATACAAGCAGTGTGATACATTGTCTC
GGTGAATGCAGTAGGTATGACGTGTATCAATTTTGACACCCCTGGTTCAC
TGACCTTATACGTAcaacttttcgaccgtagccgccaattgccgcgcgga
cagtatttttgcgaagcgaatttatgagcgaagcagttttgctatattgt
gtgcacgtacctttaacttatatcccaagcgaaaatttgctataaaattt
gctatataaatcacatcttcaaaccgatgattttatcaaaatgactaTGA
ATGGTTTGGCTGGAAGCCatgaaaactttctcggtttgatAGCTAGGACT
GCTAAAAAaagccgttttaaaatggtgtaccctagcagtgaatagcaaca
aaattaccggaagccgaaacacggacgtggttcttcggttttaaatgttt
attttgctgttaaatggaaaaaaaattagtttgaacggtgacagaaagga
tcttcatcattccttgacttttaacagcaagtatcgtatcaagtatcaaa
taagctcaatcaatgagaggtttttgtaAGTCGCACGGGGctggaggagt
gctcttttagtgaacggaacttaccttgcaaaaccaagtggatattctat
gataaagaagtacgaaGGTAAtaaaatttgtcgaatttgttaAGAAATAA
ATCAcaactgcccaagaaccaacaagccatatttttttgtaaatttttgt
ttttgttttatttttatgttttgttgatttcgacagacgattcgtgactC
GAATAAAAATAttcgatcgttcgacgaatatcgttcaattttattaaggc
accatttacactagaataactagaaggaaaaaaaagagcgatgcCCGGGC
GGCGGTGgatgttgtgccgccgtggattatgtggttaatttggggcatta
aggctatTACGaacctgtctctatagcggctttattagagagatttttag
agtgtctcttattttgctagcaacttgcgaattgaggtggagtctggatc
gcttcgcaacccttatacaatacggctagtttgtACGTTTTACCACTCCA
AAACCGTCTCAGTCTTTTTTTTACACCTATAGACAACagaaaaaggcatt
aaaaaaggattggatcgagtttagggggataattaaataattaagtagCA
CGCGCCTGACTGCGCcactacggtcgaaaagttgtattggatataaataa
tataaattgACACTTGTGGTAATCTTAGATACTTTTTGCAAGCTACGATC
GCTGACCTTTATATCCCTGctccaagctatatccgccatctttgatcgga
gttttcttgaaagttggtacccgcaaagaagccattgtagtgtttgacac
tttgcctaacgacaaaTGGCGCTACATTATTAGTGTACAAGTGAAACTAG
ATATAGCGCTCTCTTTGCGAGTACCAATTcccaaaaaactccgatcaaag
attttgcttgagcggcattgagtaacttggtccagggatatataaatgTC
AGTGTCTACGATGCATCGATTTTAAGTTATTATCCTCAGCTTTGCCTGTa
gcaaaagtgaaaagtaaattAACCAAAGCATCAAGCGTTTGTCAAGCTGG
AGCCCATCCCTTTTAGTacagttttttaaaattttgataccGCTTAAGAA
ATTGTATCAACATAAACTCAATACAATCAAAAAGTGGTTTTGAAAATAGC
TCTGGGTATACAAGATAACCCATttttaaaatgaataaaatcataaaatc
aagGTATAGTTAATTTAACCCTCGCACTTTTACTACAATTAAAGCCGTGA
TTAAAGCTACCTTAAGGATTACCACTTTGGCAGAAGGTTAAAATTGTTAT
TTCAATCTGTTATAGATACAAAGTTGATGTCCTCATGGTAGGTTCGATGT
GTTCTTGCATTGCCAGTAGAAGCAGTTCAACCAATGATCAACTCTTTCGA
TCACCTGAAGGAAATAAACTAGATAGAGCCAATTTGATGGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002263-exon-sc0000019-1491911889:609674..610037 | TCONS_00002263-exon-sc0000019-1491911889:609674..610037 | Clytia hemisphaerica | exon |
| TCONS_00002263-exon-sc0000019-1510915933:609674..610037 | TCONS_00002263-exon-sc0000019-1510915933:609674..610037 | Clytia hemisphaerica | exon |
| TCONS_00002263-exon-sc0000019-1575043694:609674..610037 | TCONS_00002263-exon-sc0000019-1575043694:609674..610037 | Clytia hemisphaerica | exon |
| TCONS_00002263-exon-sc0000019-1491911889:611889..612016 | TCONS_00002263-exon-sc0000019-1491911889:611889..612016 | Clytia hemisphaerica | exon |
| TCONS_00002263-exon-sc0000019-1510915933:611889..612016 | TCONS_00002263-exon-sc0000019-1510915933:611889..612016 | Clytia hemisphaerica | exon |
| TCONS_00002263-exon-sc0000019-1575043694:611889..612016 | TCONS_00002263-exon-sc0000019-1575043694:611889..612016 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019 | supercontig | sc0000019:609674..612016 + |
Blast
The following BLAST results are available for this feature:
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