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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002340 ID=TCONS_00002340|Name=TCONS_00002340|organism=Clytia hemisphaerica|type=transcript|length=418bp
TCCTATCCGTCATTGGGGAATATATCGTCACACACATTTATTTGAGATTT
GAATTGAAAACCTTATAGATTGTATcgaaaattggaaaactttgGATACA
AATTTACGAATAATTCCTATCCGTCATTTGGGGATATATCGTCACACAAT
TTGATTTGAGATTTGAGGATACAAATTTACGAATAATTCCTATCCGTCAT
TGGGGGATATATCGTCATACAAATTGATTTGAGATTTGAGGATACACATT
TACGAATAATTCCTATCCGTCATTGGGGGGATATATCGTCACACATTTGA
TTTGAGATTTGAGGATACAAATTCACGAATAATTCCTACCCGTCATTGGG
GAATATATCGTCATACATTGATTTGAGATTTGAATTGAAAACCTTTGAGA
CTTATATAGATTGTATTN Run BLAST on NCBI transcript from alignment at sc0000019:965170..966289- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002340 ID=TCONS_00002340|Name=TCONS_00002340|organism=Clytia hemisphaerica|type=transcript|length=1120bp|location=Sequence derived from alignment at sc0000019:965170..966289- (Clytia hemisphaerica)
TCCTATCCGTCATTGGGGAATATATCGTCACACATTTGATTTGAGAATTT
GATCTTTACACATTTGATTTAGGATTTGAGAACTTTGGAGTTACACATGA
TTTGGATACTTCAGACTTGATTGAGAATTTGAGATTTACGACTTAACGAA
CGGGAACAAAGTTTGATATTTTCTCGGCCCCATTGGAAATTTGGCCCCTA
CGACTAAAGAATATATCGAAAATTAGTTACTTGAACGTTGAGAATTGTAC
GTATTTAGAAAGCAAGAAATTTTGAATCGTCAAAATTGGGAAACTTTACT
GGAACTTNTGGAAATTTAATGAAATATTTATTGATTGAACTTATGCTGTT
GAACTTGGAACTCACACGGATACGATTTATGGATTTACATTTGATTTAGA
TACTTTTGAGATTTGGAATTTATCGAAAATTGGAGAACTTTGGATACAAA
TTTACGAATAATTCCTATCCGTCATTGGGGGAATATATCGTCACACATTG
ATTTGAGATTTGAATTTGAAAACTTTTGAGATTTAGATTGTATCGAAAAT
TGGAGAAGTTTGGATACAAATTCACGAATAATTCCTACCCGTCATTGGGG
AATATATCGTCATACATCGAATTGAGATTTGAATTGAAAACCTTTGAGAC
TTATATAGATTGTATCGAAAATTGGATAAGTTTGGATACAAATTCACGAA
TAATTCCTACCCGTCATTGGGGAATATATCGCCATACATTTATTTGAGAT
TTGAATTGAAAACCTTATAGATTGTATCGAAAATTGGAAAACTTTGGATA
CAAATTTACGAATAATTCCTATCCGTCATTTGGGGATATATCGTCACACA
ATTTGATTTGAGATTTGAGGATACAAATTTACGAATAATTCCTATCCGTC
ATTGGGGGATATATCGTCATACAAATTGATTTGAGATTTGAGGATACACA
TTTACGAATAATTCCTATCCGTCATTGGGGGGATATATCGTCACACATTT
GATTTGAGATTTGAGGATACAAATTCACGAATAATTCCTACCCGTCATTG
GGGAATATATCGTCATACATTGATTTGAGATTTGAATTGAAAACCTTTGA
GACTTATATAGATTGTATTN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002340-exon-sc0000019-1575043694:966257..966289 | TCONS_00002340-exon-sc0000019-1575043694:966257..966289 | Clytia hemisphaerica | exon |
| TCONS_00002340-exon-sc0000019-1575043694:965794..965795 | TCONS_00002340-exon-sc0000019-1575043694:965794..965795 | Clytia hemisphaerica | exon |
| TCONS_00002340-exon-sc0000019-1575043694:965170..965552 | TCONS_00002340-exon-sc0000019-1575043694:965170..965552 | Clytia hemisphaerica | exon |
| TCONS_00002340-exon-sc0000019-1510915933:966257..966289 | TCONS_00002340-exon-sc0000019-1510915933:966257..966289 | Clytia hemisphaerica | exon |
| TCONS_00002340-exon-sc0000019-1510915933:965794..965795 | TCONS_00002340-exon-sc0000019-1510915933:965794..965795 | Clytia hemisphaerica | exon |
| TCONS_00002340-exon-sc0000019-1510915933:965170..965552 | TCONS_00002340-exon-sc0000019-1510915933:965170..965552 | Clytia hemisphaerica | exon |
| TCONS_00002340-exon-sc0000019-1491911889:966257..966289 | TCONS_00002340-exon-sc0000019-1491911889:966257..966289 | Clytia hemisphaerica | exon |
| TCONS_00002340-exon-sc0000019-1491911889:965794..965795 | TCONS_00002340-exon-sc0000019-1491911889:965794..965795 | Clytia hemisphaerica | exon |
| TCONS_00002340-exon-sc0000019-1491911889:965170..965552 | TCONS_00002340-exon-sc0000019-1491911889:965170..965552 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019 | supercontig | sc0000019:965170..966289 - |
Blast
The following BLAST results are available for this feature:
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