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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002370 ID=TCONS_00002370|Name=TCONS_00002370|organism=Clytia hemisphaerica|type=transcript|length=927bp
TAGGGGATTGTTAAACTTGGTCCTGGTCTTTTATCAGAGAACatattttt
ttcacaatgatCAATTCACAACATGCAACCATTGGTCAGACGGTCACTTC
GCGCAAATTGTTTTTACGCCTATTTACatctaatttttttcaataaaaag
gctCTCACTTCACgtacaaaaaaaatataaatcacTGCATCTGAGATGAT
TCCTATCGGATAAAAAGCTGCTGCTATTCTCAAGATGTACGGTCTTTTAA
TCTTTAGCAAGATGCAAATGTAGTACCCGACGTCTGGTATAGCGATGAAC
AATACAAACGTTGTTAGAAGCCAAACTGGCACCAAAATTGTCTTTTTGTG
TCGCAACATGTCTTTACGACGGCGATTCCTGATGTTACTAGAAATTGTTG
ATTCTTTACGAACCCTTTGAGCAAGACTACGCTCTAATTTCAATGTCTTT
GCTTGTGATTGAGATGTTGATTTTTGGACAACAGTATTTGCCATGGAATA
TTTCCTGGTTGTTTGGATTTTAGGTTGTGACGGGCGAATGATCTCGGAAA
GTTTTCTAATAGGATTCAGTTTTGGTTGTGGAGTCGCTATTTCGGCTGTT
TCTCCGATATCAGAAAGTTGTCTTGTTATACTGAGCTTCGGTTTCCAGCC
TATACTGATGCTTGAGAATCGCCTAATGGAAATGTCATCTCTGGAGAGAG
GCAATGGTAATTCATGGACACTTGTCTTATCTGATTCCTCTTCAAAGGAT
TTTTCGCGATAACAAGATACTCTCCATATGATGTACGCGTAAATaacaat
caaaaaaataatgaaaaaaatttccaaagggAACCAAAGATACATTGAGA
ATATAGCAAGGGTGTGTTCCAAATTCTGCAGTGTCAACAAAAATGTGATC
GTTGCTGACAAAGATATTGTAAGACAG Run BLAST on NCBI protein sequence of TCONS_00002370-protein >TCONS_00002370-protein ID=TCONS_00002370-protein|Name=TCONS_00002370-protein|organism=Clytia hemisphaerica|type=polypeptide|length=268bp
CLTISLSATITFLLTLQNLEHTLAIFSMYLWFPLEIFFIIFLIVIYAYII
WRVSCYREKSFEEESDKTSVHELPLPLSRDDISIRRFSSISIGWKPKLSI
TRQLSDIGETAEIATPQPKLNPIRKLSEIIRPSQPKIQTTRKYSMANTVV
QKSTSQSQAKTLKLERSLAQRVRKESTISSNIRNRRRKDMLRHKKTILVP
VWLLTTFVLFIAIPDVGYYICILLKIKRPYILRIAAAFYPIGIISDAVIY
IFFVREVRAFLLKKIRCK Run BLAST on NCBI transcript from alignment at sc0000019:199142..200068 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002370 ID=TCONS_00002370|Name=TCONS_00002370|organism=Clytia hemisphaerica|type=transcript|length=927bp|location=Sequence derived from alignment at sc0000019:199142..200068 (Clytia hemisphaerica)
CTGTCTTACAATATCTTTGTCAGCAACGATCACATTTTTGTTGACACTGC
AGAATTTGGAACACACCCTTGCTATATTCTCAATGTATCTTTGGTTccct
ttggaaatttttttcattatttttttgattgttATTTACGCGTACATCAT
ATGGAGAGTATCTTGTTATCGCGAAAAATCCTTTGAAGAGGAATCAGATA
AGACAAGTGTCCATGAATTACCATTGCCTCTCTCCAGAGATGACATTTCC
ATTAGGCGATTCTCAAGCATCAGTATAGGCTGGAAACCGAAGCTCAGTAT
AACAAGACAACTTTCTGATATCGGAGAAACAGCCGAAATAGCGACTCCAC
AACCAAAACTGAATCCTATTAGAAAACTTTCCGAGATCATTCGCCCGTCA
CAACCTAAAATCCAAACAACCAGGAAATATTCCATGGCAAATACTGTTGT
CCAAAAATCAACATCTCAATCACAAGCAAAGACATTGAAATTAGAGCGTA
GTCTTGCTCAAAGGGTTCGTAAAGAATCAACAATTTCTAGTAACATCAGG
AATCGCCGTCGTAAAGACATGTTGCGACACAAAAAGACAATTTTGGTGCC
AGTTTGGCTTCTAACAACGTTTGTATTGTTCATCGCTATACCAGACGTCG
GGTACTACATTTGCATCTTGCTAAAGATTAAAAGACCGTACATCTTGAGA
ATAGCAGCAGCTTTTTATCCGATAGGAATCATCTCAGATGCAgtgattta
tattttttttgtacGTGAAGTGAGagcctttttattgaaaaaaattagat
GTAAATAGGCGTAAAAACAATTTGCGCGAAGTGACCGTCTGACCAATGGT
TGCATGTTGTGAATTGatcattgtgaaaaaaatatGTTCTCTGATAAAAG
ACCAGGACCAAGTTTAACAATCCCCTA Coding sequence (CDS) from alignment at sc0000019:199142..200068 >TCONS_00002370 ID=TCONS_00002370|Name=TCONS_00002370|organism=Clytia hemisphaerica|type=CDS|length=807bp|location=Sequence derived from alignment at sc0000019:199142..200068 (Clytia hemisphaerica)
TGTCTTACAATATCTTTGTCAGCAACGATCACATTTTTGTTGACACTGCA
GAATTTGGAACACACCCTTGCTATATTCTCAATGTATCTTTGGTTccctt
tggaaatttttttcattatttttttgattgttATTTACGCGTACATCATA
TGGAGAGTATCTTGTTATCGCGAAAAATCCTTTGAAGAGGAATCAGATAA
GACAAGTGTCCATGAATTACCATTGCCTCTCTCCAGAGATGACATTTCCA
TTAGGCGATTCTCAAGCATCAGTATAGGCTGGAAACCGAAGCTCAGTATA
ACAAGACAACTTTCTGATATCGGAGAAACAGCCGAAATAGCGACTCCACA
ACCAAAACTGAATCCTATTAGAAAACTTTCCGAGATCATTCGCCCGTCAC
AACCTAAAATCCAAACAACCAGGAAATATTCCATGGCAAATACTGTTGTC
CAAAAATCAACATCTCAATCACAAGCAAAGACATTGAAATTAGAGCGTAG
TCTTGCTCAAAGGGTTCGTAAAGAATCAACAATTTCTAGTAACATCAGGA
ATCGCCGTCGTAAAGACATGTTGCGACACAAAAAGACAATTTTGGTGCCA
GTTTGGCTTCTAACAACGTTTGTATTGTTCATCGCTATACCAGACGTCGG
GTACTACATTTGCATCTTGCTAAAGATTAAAAGACCGTACATCTTGAGAA
TAGCAGCAGCTTTTTATCCGATAGGAATCATCTCAGATGCAgtgatttat
attttttttgtacGTGAAGTGAGagcctttttattgaaaaaaattagatG
TAAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002370-exon-sc0000019-1491911889:199142..200068 | TCONS_00002370-exon-sc0000019-1491911889:199142..200068 | Clytia hemisphaerica | exon |
| TCONS_00002370-exon-sc0000019-1510915933:199142..200068 | TCONS_00002370-exon-sc0000019-1510915933:199142..200068 | Clytia hemisphaerica | exon |
| TCONS_00002370-exon-sc0000019-1575043694:199142..200068 | TCONS_00002370-exon-sc0000019-1575043694:199142..200068 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019 | supercontig | sc0000019:199142..200068 . |
Blast
The following BLAST results are available for this feature:
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