|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002422 ID=TCONS_00002422|Name=TCONS_00002422|organism=Clytia hemisphaerica|type=transcript|length=1040bp
aaaatgttaagaacatttttagacttgaaactcaaaaagttaaggacATC
CGAtggcttcaaaaagttttttggatgttcttataaaaaaacgtttacta
TTTGCTATGGGTATTTTTCAGAATAAGGGAACTGGAATCTGGAATTTGCC
CACAGATAACGCCACATATGCAAGGCTATTTCTAGATGTTTTGGTCGGAA
AGCTGATGTAACTTTGACTCCCACACATCGTGAATTATTCCAGGCTTTTA
AGTTCGTTAAGAAGTCATAAAGGAAAAAGTCTTCTAGTCCCAGTCGATTG
TCTCTCTCGTTATACGGTAGTAGTAGCGACCGTAGTGGACCGTGCAGTta
tagagcatccggctacggtgcgcaaggttgtgggttcaaccccagTCGGG
TCATACTAAAGATTCCAAAATGATACTTGATgcttctctgcttgatgctc
aacaATTaggagaaggatcaagggtgaTTGGAGCAATGCGCAGGGAGAAA
GATCGGCACCCTCCCCAaccttcaggtagatagctatcgaaagagaagCA
TTCGGGCTGCCTCCGACTGCCGTCGTAGACGTCGTATACTACTCATAGTA
GGTTTGAAGGGGTTAAGGATTCTTTTATTTAGAAGGACAGATGGCAACTT
TCTTtgagaaaataattaaaaggtTTTTGGATTATCCCATTTGTCCTATT
CGGCCATATGATATATTTTTGTGACCTTTTAATAAGGTTTTTGAAGAGAA
CTACCGACGGTTTCCTGGGCGGCTGTCTTTTGTCACATTCATCTGTTTAA
TTTTACACGCTTTGTTTTTCTCTCGTGTGTAAGGTCAAAGAAATCCCATG
CTGGATGTTTTTGGACTGGATCAATCAAATCGTTGCTGTTATTGACAAAC
CCATCCAGGAATGCGTTCAACCGATTCTGAAAGGGGTTGCCAGAGCTTAT
CCACAAGCTCTCATGTATCCCTTAGGGGTTTGTAAAGATCAACTTGCTTT
TGATGGCACTGTTGAAGGGCAGAAGATGAGGAAATTCTTC Run BLAST on NCBI transcript from alignment at sc0000020:175239..176278+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002422 ID=TCONS_00002422|Name=TCONS_00002422|organism=Clytia hemisphaerica|type=transcript|length=1040bp|location=Sequence derived from alignment at sc0000020:175239..176278+ (Clytia hemisphaerica)
aaaatgttaagaacatttttagacttgaaactcaaaaagttaaggacATC
CGAtggcttcaaaaagttttttggatgttcttataaaaaaacgtttacta
TTTGCTATGGGTATTTTTCAGAATAAGGGAACTGGAATCTGGAATTTGCC
CACAGATAACGCCACATATGCAAGGCTATTTCTAGATGTTTTGGTCGGAA
AGCTGATGTAACTTTGACTCCCACACATCGTGAATTATTCCAGGCTTTTA
AGTTCGTTAAGAAGTCATAAAGGAAAAAGTCTTCTAGTCCCAGTCGATTG
TCTCTCTCGTTATACGGTAGTAGTAGCGACCGTAGTGGACCGTGCAGTta
tagagcatccggctacggtgcgcaaggttgtgggttcaaccccagTCGGG
TCATACTAAAGATTCCAAAATGATACTTGATgcttctctgcttgatgctc
aacaATTaggagaaggatcaagggtgaTTGGAGCAATGCGCAGGGAGAAA
GATCGGCACCCTCCCCAaccttcaggtagatagctatcgaaagagaagCA
TTCGGGCTGCCTCCGACTGCCGTCGTAGACGTCGTATACTACTCATAGTA
GGTTTGAAGGGGTTAAGGATTCTTTTATTTAGAAGGACAGATGGCAACTT
TCTTtgagaaaataattaaaaggtTTTTGGATTATCCCATTTGTCCTATT
CGGCCATATGATATATTTTTGTGACCTTTTAATAAGGTTTTTGAAGAGAA
CTACCGACGGTTTCCTGGGCGGCTGTCTTTTGTCACATTCATCTGTTTAA
TTTTACACGCTTTGTTTTTCTCTCGTGTGTAAGGTCAAAGAAATCCCATG
CTGGATGTTTTTGGACTGGATCAATCAAATCGTTGCTGTTATTGACAAAC
CCATCCAGGAATGCGTTCAACCGATTCTGAAAGGGGTTGCCAGAGCTTAT
CCACAAGCTCTCATGTATCCCTTAGGGGTTTGTAAAGATCAACTTGCTTT
TGATGGCACTGTTGAAGGGCAGAAGATGAGGAAATTCTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002422-exon-sc0000020-1491911889:175239..176278 | TCONS_00002422-exon-sc0000020-1491911889:175239..176278 | Clytia hemisphaerica | exon |
| TCONS_00002422-exon-sc0000020-1510915933:175239..176278 | TCONS_00002422-exon-sc0000020-1510915933:175239..176278 | Clytia hemisphaerica | exon |
| TCONS_00002422-exon-sc0000020-1575043694:175239..176278 | TCONS_00002422-exon-sc0000020-1575043694:175239..176278 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000020 | supercontig | sc0000020:175239..176278 + |
Blast
The following BLAST results are available for this feature:
|
