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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002634 ID=TCONS_00002634|Name=TCONS_00002634|organism=Clytia hemisphaerica|type=transcript|length=2620bp
gggaaattatattgttcctgAGCTTAAAATATCCATTGGGGATGTTTTTG
AATAGCAATTTGGATAAAATGGGgttaaaattcaataaaagtcaatttcc
cagtggggctgaaattgttgGGTATTTTGTCcaccgggacgaaattttgg
ccaaatttttcagtggggctggggtccaaGCTGGTCCCATGGTACAGGGC
AATAAATAATGTGCAAATAGTGAATGTGAGCATATTGATGTGCCTTGATT
GACAAGTTAGATTTCAATTCTCTCATTAAAGAAATCAGTTTTCACGTCCT
GaaaattggaataaaaatgaaaatatttttccatataTCAAAGCATTgtc
caaaacaaaatttctaaatgcggGGCAAACTTAGgaatttactttttctt
gcttgaaaaagtcaaagattcctctctagccccttTGGGGCTCAATATGA
TATCAAGGCTGTGTCGCATTTGTCTGGACACGCATTGTTACTAGAATGTT
CTTGAAATTGACAAATCACTACAAAGGAAGCTTAAGCCATAAAAGGAAGT
TAGCCTTAGCGTGTCCAAATTCTGGGGTGACTATCCCACAGTTCCTCCTT
CTGCTCTTCGCTATAATCCGGTCTCTTGACGACTTCATTACAGTTCTATT
ACTGAACAGCTAAAGAATGCAGACGTTGAGAAGTAAAAAACACATAACAA
CAACGTAGCTAATGAAATTATGCGGAACTGTTTGGTCTAATTTGGAAAGC
TAGACAATATTTTGCTAAAATAGAGAATTTTGGCATTCCTTTTCCTTTAT
GTATACCAAATGCGCCATGTGACTAATCTAATTTTTGAGCCGCAATGAAT
AACGGTATATCGGACTTTTTTTTAACATAATCAGTTTTTTTCGTTTAATT
GTTTATTTCAATCCGTTATTCCGTGTCTTGAGTAAGCATTTTTTCCTTCC
TCTTTTCTCTTTATTACATTTAGTGAATAGTTGACGGATTAATTTAAGGT
ATATAAAGGCCCTCCATTCATTCATAACATACCTACACTGACAAGACTAC
AAATACAAAAAACCATTGATAACAAAACACACTCAATGAATTTAATAGTA
ATAGTATagattacaaaataaaaacatgtacaaatctggtcagtaaaata
cacgaaaaacaacacaaaaagtaTTGTATTTAACCTATTTAACACGTTGT
CTAGTgctattttgttttattatcaTTACATATTTTTTAGACGGTAGACA
AAATTTCTGGCATTTTGATTTGAAGAGCTGGTTCGGTTGTTGCGAAAGGT
GAATATGGCAAACCAATTTATTGGAACACTACTTCTTTGTTTACAATTAT
TCAAAGTACACCTTGCTTGTGGGCCTGGCTCTGGCACTTCACGAGGCCGA
CTTCGCGACCACAATATTAAAGGAAATCGTTTACCAGATGTACCAGAGTT
TTCTACAGCTGCCAGTGGACCATTCCCGGGTGCTAAACACCGTACTGATC
CAGGATTGGTCGATATTTTGTCTACTGATATTGTTTTTAAAGATAAATCG
TACAATGCTAATGCAAGAAAATCGATAAAGACTTGTCACAGTTCATTGAA
AAAACTTGCTGGTGTTGTCAAACGCTTCTGGAAAAACAAATACAAAGTCT
ACGTCCTAGAGGGTTACTTACCCtacggaaaaaaatcattatataAACAT
GGAAAACATTCTTTACATTATGCTGGCCAAGCTTTTGATATTTCACTGAC
CAACTCCCCTGAGAATACCGATGACCGGCTCGGCGAAGTCGTTCCTGAAC
ATACCTTGAGGACCCTTGCTGGTTTGGCGTATTACAATGCACAATTTACG
TTCGTTCAATTGAAGAAAAACCATCTGCATGTCTCTTGTGACTCAACAGG
ACACGAAGTTTCAAGAGGGCGTTGTTTCAGTGGTGAAAGCTCTGTAAGAA
CTCCATCCAAAACCATCGCTATGAAAGATCTCAAAATTGGGGATTCTGTT
TTAACAATGAACCCAAATGGTCAGCCAACGTTTAGTGAAGTTACCATGAT
GTTGCATAAAGATGGAACAAGATATGTCGAGGACTTTGTCAATATTGAAA
CCAATTCCGGAAAATCGATCACCTTGAGCCCGTATCATTTGATTCAAACA
TTAGAAACTGGATATGTTTTCAGTAAAGATGttaaaatcaatcaaacatT
ACAAACTTATGATGATTCGAAGAATACATTCCAACTCAGTCAAGTTCGTA
ATATTTCTTTCGATACTGCAGGAGTTGGTATATACGCTCCGTTAACCAAT
GAAGGTACTATCATCGTTGACGATGTCTTCGCATCTTGTTATGCTCTGTT
CCCTTCACATAGTGTCTCCCATGCTGTTTTCTGGGTCTGGAGACAGATAT
ACCCATTCCTGGCAAACTCATCTGAAATTTCCTCCAAAACGACCCAACAA
ACTTACCATTGGTATGCCGACTTTCTAAGACAATCAATGAATTATTTAAA
TATCTTCCCCTATCTATTGTAATGAATTCAGAAAAAGAGTGTATCTAAAA
TATGACAGATGTAAATAttataaatataatataaatacaGTGCACGATAT
TATTAGGATCCTAATTTTCA Run BLAST on NCBI protein sequence of TCONS_00002634-protein >TCONS_00002634-protein ID=TCONS_00002634-protein|Name=TCONS_00002634-protein|organism=Clytia hemisphaerica|type=polypeptide|length=405bp
MANQFIGTLLLCLQLFKVHLACGPGSGTSRGRLRDHNIKGNRLPDVPEFS
TAASGPFPGAKHRTDPGLVDILSTDIVFKDKSYNANARKSIKTCHSSLKK
LAGVVKRFWKNKYKVYVLEGYLPYGKKSLYKHGKHSLHYAGQAFDISLTN
SPENTDDRLGEVVPEHTLRTLAGLAYYNAQFTFVQLKKNHLHVSCDSTGH
EVSRGRCFSGESSVRTPSKTIAMKDLKIGDSVLTMNPNGQPTFSEVTMML
HKDGTRYVEDFVNIETNSGKSITLSPYHLIQTLETGYVFSKDVKINQTLQ
TYDDSKNTFQLSQVRNISFDTAGVGIYAPLTNEGTIIVDDVFASCYALFP
SHSVSHAVFWVWRQIYPFLANSSEISSKTTQQTYHWYADFLRQSMNYLNI
FPYLL Run BLAST on NCBI transcript from alignment at sc0000021:576888..582133+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002634 ID=TCONS_00002634|Name=TCONS_00002634|organism=Clytia hemisphaerica|type=transcript|length=5246bp|location=Sequence derived from alignment at sc0000021:576888..582133+ (Clytia hemisphaerica)
gggaaattatattgttcctgAGCTTAAAATATCCATTGGGGATGTTTTTG
AATAGCAATTTGGATAAAATGGGgttaaaattcaataaaagtcaatttcc
cagtggggctgaaattgttgGGTATTTTGTCcaccgggacgaaattttgg
ccaaatttttcagtggggctggggtccaaGCTGGTCCCATGGTACAGGGC
AATAAATAATGTGCAAATAGTGAATGTGAGCATATTGATGTGCCTTGATT
GACAAGTTAGATTTCAATTCTCTCATTAAAGAAATCAGTTTTCACGTCCT
GaaaattggaataaaaatgaaaatatttttccatataTCAAAGCATTgtc
caaaacaaaatttctaaatgcggGGCAAACTTAGgaatttactttttctt
gcttgaaaaagtcaaagattcctctctagccccttTGGGGCTCAATATGA
TATCAAGGCTGTGTCGCATTTGTCTGGACACGCATTGTTACTAGAATGTT
CTTGAAATTGACAAATCACTACAAAGGAAGCTTAAGCCATAAAAGGAAGT
TAGCCTTAGCGTGTCCAAATTCTGGGGTGACTATCCCACAGTTCCTCCTT
CTGCTCTTCGCTATAATCCGGTCTCTTGACGACTTCATTACAGTTCTATT
ACTGAACAGCTAAAGAATGCAGACGTTGAGAAGTAAAAAACACATAACAA
CAACGTAGCTAATGAAATTATGCGGAACTGTTTGGTCTAATTTGGAAAGC
TAGACAATATTTTGCTAAAATAGAGAATTTTGGCATTCCTTTTCCTTTAT
GTATACCAAATGCGCCATGTGACTAATCTAATTTTTGAGCCGCAATGAAT
AACGGTATATCGGACTTTTTTTTAACATAATCAGTTTTTTTCGTTTAATT
GTTTATTTCAATCCGTTATTCCGTGTCTTGAGTAAGCATTTTTTCCTTCC
TCTTTTCTCTTTATTACATTTAGTGAATAGTTGACGGATTAATTTAAGGT
ATATAAAGGCCCTCCATTCATTCATAACATACCTACACTGACAAGACTAC
AAATACAAAAAACCATTGATAACAAAACACACTCAATGAATTTAATAGTA
ATAGTATagattacaaaataaaaacatgtacaaatctggtcagtaaaata
cacgaaaaacaacacaaaaagtaTTGTATTTAACCTATTTAACACGTTGT
CTAGTgctattttgttttattatcaTTACATATTTTTTAGACGGTAGACA
AAATTTCTGGCATTTTGATTTGAAGAGCTGGTTCGGTTGTTGCGAAAGGT
GAATATGGCAAACCAATTTATTGGAACACTACTTCTTTGTTTACAATTAT
TCAAAGTACACCTTGCTTGTGGGCCTGGCTCTGGCACTTCACGAGGCCGA
CTTCGCGACCACAATATTAAAGGAAATCGTTTACCAGATGTACCAGAGTT
TTCTACAGCTGCCAGTGGACCATTCCCGGGTGCTAAACACCGTACTGATC
CAGGATTGGTCGATATTTTGTCTACTGATATTGTTTTTAAAGATAAATCG
TACAATGCTAATGCAAGAAAATCGATAAAGgtattcttttataaaaaggc
TTTAAATCACAAAAATCTTTAGTAGGAAATAACTGATATTCGGAAATATT
TCTTATTATTCTTAAAGAAATGTTGCAACTAGTATAGTACATTCTGGTGT
TTTTTAAAGTTCTTATAGTTTGTATAGATAAGGCACGGTTAGTAAGACTT
CCATTTCAACACAACCCCAGAGCCATTTTCACCActgtttgattttactg
atggacgagATACATTCAACACAATATGCCATTTCATGAAAGTTCAACGA
CTACCTCGTTTTGAAAGCATTGCCAAGGTATATTAATTACATCCCTTGAA
TATTCAACTGCTTCTTTAATAAAATTGAGGGGACTGGGTAAGAAATTGAC
CCCAACCATCaatttctttccatttttttccTTAGACTTGTCACAGTTCA
TTGAAAAAACTTGCTGGTGTTGTCAAACGCTTCTGGAAAAACAAATACAA
AGTCTACGTCCTAGAGGGTTACTTACCCtacggaaaaaaatcattatata
AACATGGAAAACATTCTTTACATTATGCTGGCCAAGCTTTTGATATTTCA
CTGACCAACTCCCCTGAGAATACCGATGACCGGCTCGGCGAAGTCGTTCC
TGAACATACCTTGAGGACCCTTGCTGGTTTGGCGTATTACAATGCACAAT
TTACGTTCGTTCAATTGAAGAAAAACCATCTGCATGTCTCTTGTGACTCA
ACAGGTAAAATGTCTTgcatttgattttattcaagGCCGTTGTAGTGGAG
GGACCGGAATACTGGTAttcttttcatgaattaccgaCCGGCCAAATATT
TCTCTAATACCGGTTAAAAATGTtctgaagggtactatgatacTGGATTT
CCGATCATTTTGCCGTGAATTACCAAAATATTGGCCAACGGAGACTCGAA
ACCCAATTTCATATCATTAATTTCGACTGAACGTTTCAATACGCAGGAAG
GTCTAATAGAATCAACATGGAATTCATTCATCTAAATTACGGAGAGTTAG
TGAAGACAGTAAAGATGAGAAATACAGACTGAGTCTACTGATAAAGATCT
TCGTGTAGGAAATCACGAATCTCTCTCGTGATAGTTGAAATACTTTGAAT
TTCATAAGGAATGTGATGGATGGTGCTGTTTTTCAAATCGTACGAGCAAC
ATACTTACAAATCAAGTTGAATTGAGTCCGTAATCTATTCGGTGCAGGCT
TTTTTTACATAGttggcgctctctaattcgacgctctactattcgatagg
ctcatGAAAATCGTattcccttgaagatcgaataagatagcgtcaactgt
acttcaaaatgaaattcccCCAAAAAAAAGATCATTTCAAATTATTACTT
TAAATTTCTGTGGGCgaattaatttcattaaaagtttgTGCACCTACCGA
AAGGCTAAACTAGATGCAAGTACATTAAAATTAAATACTTTCTATTGGGT
TTGAAAGGTCACTCTCGATCTTCTTCAGTTTTTACAATAtggaaaaattc
taaaaacaagtTTATGAGGAGGTCATTGAAAATCAAGGGGTCAGTGAATC
GAGGCAAAAAATTATGTTAGCGTACATGCATGTAAAAAGAATTTagtcca
aaaaaattgatttagtCTAAAAAATTGATTTAGTCTAAAAAATCCATAGA
GTCTCGAAAATTCCTGGCTAAAAAACGGAATTCTTTTTGGAATAGCGGCG
TCatggtttttattttgacaacATTTTTGTCCTTTTTAATGGCACACTAT
CGCCACAGGGATAGTGTAAGAATTTTCGATCCCAGGACAGTAGCTATAGT
CTCACTAAAGTgacaaaattatatttcaagtTTTGCATTATGTAATACAT
TCTaaaagaaaagagaagaaaatcaGTCAGTCAAAGTCAGGACATTCAGG
TTGCTTTTAGGCGTGTCCCTTTGTTAGGGTTAGGTTCGTTAGGTTCccac
caaattttctttttcaaaatataatcatGTATTTATGCGCCAAATTTCAT
GACTTTCAACCAAATGCtgtatttcttataaaattaagATATAACCGAGT
AGACTACACACGTGTCAATTTTACGGAACATTATACCATTATGTAAGGCG
TGCCAATTAAAGGATTAACATTTTGGTGTAAATTTACGGTTATTTAACGG
TTCTCACGCCGTTAATTTAAAGTTAAATATAATCCTTTGAAATAGTACTC
GAAATTACCACAAATATACTAAATTGCTAACACTGTGGTATTCATTTAGT
TGCCGCCTATATAACCACTGAAAGCATATTAAGTATATTGACTCGTGTTT
AAAGTTGTGCACTTAATGATAAATTAGCGGTCAAAGGATTATAGCAAATT
TACTTGGATTAGATTGGTTGAAACAAAGAATTGTTCCCGTTAAAGGACAA
TATTTATCctatctcctaccatttgcttacacagcatttctTAAACAAAA
GAGAGAACAACCTTCTCATCTGCCAGCGTCAGGCAAGcacaaaattttct
attttgcttTATCACCATAGAGACGCGTATTCTTCCTATAACTGAAGGAA
ATATATCTTTAACTCGCGCGATTTGTAACATctacaacacccctgcctct
gtgACCCAGTAGGATCTTCCCTATTGGCTACACTAATGAGAAAACATCTC
CCAAATAGCACATTTTTTCTTCCCACTGCAGAAATATCTTCACCCCTCAA
TTTTAAACAGAACAATTATGTTTGACTATGATCTAAATTAAGATTCACAA
AAAATTAGGAGGATCTAACCCGAGTTCAATACCTCCAATAAAAGTTAAGA
CTCGACTGTTTTGAGTTTTAGACTATTTTACACTGCATCGATAATTAAAC
TATAAGTAATAATATtgatcaacaacaacaagacttaaaacttatttata
acttttaatgttttctttcattCAGGACACGAAGTTTCAAGAGGGCGTTG
TTTCAGTGGTGAAAGCTCTGTAAGAACTCCATCCAAAACCATCGCTATGA
AAGATCTCAAAATTGGGGATTCTGTTTTAACAATGAACCCAAATGGTCAG
CCAACGTTTAGTGAAGTTACCATGATGTTGCATAAAGATGGAACAAGATA
TGTCGAGGACTTTGTCAATATTGAAACCAATTCCGGAAAATCGATCACCT
TGAGCCCGTATCATTTGATTCAAACATTAGAAACTGGATATGTTTTCAGT
AAAGATGttaaaatcaatcaaacatTACAAACTTATGATGATTCGAAGAA
TACATTCCAACTCAGTCAAGTTCGTAATATTTCTTTCGATACTGCAGGAG
TTGGTATATACGCTCCGTTAACCAATGAAGGTACTATCATCGTTGACGAT
GTCTTCGCATCTTGTTATGCTCTGTTCCCTTCACATAGTGTCTCCCATGC
TGTTTTCTGGGTCTGGAGACAGATATACCCATTCCTGGCAAACTCATCTG
AAATTTCCTCCAAAACGACCCAACAAACTTACCATTGGTATGCCGACTTT
CTAAGACAATCAATGAATTATTTAAATATCTTCCCCTATCTATTGTAATG
AATTCAGAAAAAGAGTGTATCTAAAATATGACAGATGTAAATAttataaa
tataatataaatacaGTGCACGATATTATTAGGATCCTAATTTTCA Coding sequence (CDS) from alignment at sc0000021:576888..582133+ >TCONS_00002634 ID=TCONS_00002634|Name=TCONS_00002634|organism=Clytia hemisphaerica|type=CDS|length=3654bp|location=Sequence derived from alignment at sc0000021:576888..582133+ (Clytia hemisphaerica)
ATGGCAAACCAATTTATTGGAACACTACTTCTTTGTTTACAATTATTCAA
AGTACACCTTGCTTGTGGGCCTGGCTCTGGCACTTCACGAGGCCGACTTC
GCGACCACAATATTAAAGGAAATCGTTTACCAGATGTACCAGAGTTTTCT
ACAGCTGCCAGTGGACCATTCCCGGGTGCTAAACACCGTACTGATCCAGG
ATTGGTCGATATTTTGTCTACTGATATTGTTTTTAAAGATAAATCGTACA
ATGCTAATGCAAGAAAATCGATAAAGACTTGTCACAGTTCATTGAAAAAA
CTTGCTGGTGTTGTCAAACGCTTCTGGAAAAACAAATACAAAGTCTACGT
CCTAGAGGGTTACTTACCCtacggaaaaaaatcattatataAACATGGAA
AACATTCTTTACATTATGCTGGCCAAGCTTTTGATATTTCACTGACCAAC
TCCCCTGAGAATACCGATGACCGGCTCGGCGAAGTCGTTCCTGAACATAC
CTTGAGGACCCTTGCTGGTTTGGCGTATTACAATGCACAATTTACGTTCG
TTCAATTGAAGAAAAACCATCTGCATGTCTCTTGTGACTCAACAGGACAC
GAAGTTTCAAGAGGGCGTTGTTTCAGTGGTGAAAGCTCTGTAAGAACTCC
ATCCAAAACCATCGCTATGAAAGATCTCAAAATTGGGGATTCTGTTTTAA
CAATGAACCCAAATGGTCAGCCAACGTTTAGTGAAGTTACCATGATGTTG
CATAAAGATGGAACAAGATATGTCGAGGACTTTGTCAATATTGAAACCAA
TTCCGGAAAATCGATCACCTTGAGCCCGTATCATTTGATTCAAACATTAG
AAACTGGATATGTTTTCAGTAAAGATGttaaaatcaatcaaacatTACAA
ACTTATGATGATTCGAAGAATACATTCCAACTCAGTCAAGTTCGTAATAT
TTCTTTCGATACTGCAGGAGTTGGTATATACGCTCCGTTAACCAATGAAG
GTACTATCATCGTTGACGATGTCTTCGCATCTTGTTATGCTCTGTTCCCT
TCACATAGTGTCTCCCATGCTGTTTTCTGGGTCTGGAGACAGATATACCC
ATTCCTGGCAAACTCATCTGAAATTTCCTCCAAAACGACCCAACAAACTT
ACCATTGGTATGCCGACTTTCTAAGACAATCAATGAATTATTTAAATATC
TTCCCCTATCTATTGTAAATGGCAAACCAATTTATTGGAACACTACTTCT
TTGTTTACAATTATTCAAAGTACACCTTGCTTGTGGGCCTGGCTCTGGCA
CTTCACGAGGCCGACTTCGCGACCACAATATTAAAGGAAATCGTTTACCA
GATGTACCAGAGTTTTCTACAGCTGCCAGTGGACCATTCCCGGGTGCTAA
ACACCGTACTGATCCAGGATTGGTCGATATTTTGTCTACTGATATTGTTT
TTAAAGATAAATCGTACAATGCTAATGCAAGAAAATCGATAAAGACTTGT
CACAGTTCATTGAAAAAACTTGCTGGTGTTGTCAAACGCTTCTGGAAAAA
CAAATACAAAGTCTACGTCCTAGAGGGTTACTTACCCtacggaaaaaaat
cattatataAACATGGAAAACATTCTTTACATTATGCTGGCCAAGCTTTT
GATATTTCACTGACCAACTCCCCTGAGAATACCGATGACCGGCTCGGCGA
AGTCGTTCCTGAACATACCTTGAGGACCCTTGCTGGTTTGGCGTATTACA
ATGCACAATTTACGTTCGTTCAATTGAAGAAAAACCATCTGCATGTCTCT
TGTGACTCAACAGGACACGAAGTTTCAAGAGGGCGTTGTTTCAGTGGTGA
AAGCTCTGTAAGAACTCCATCCAAAACCATCGCTATGAAAGATCTCAAAA
TTGGGGATTCTGTTTTAACAATGAACCCAAATGGTCAGCCAACGTTTAGT
GAAGTTACCATGATGTTGCATAAAGATGGAACAAGATATGTCGAGGACTT
TGTCAATATTGAAACCAATTCCGGAAAATCGATCACCTTGAGCCCGTATC
ATTTGATTCAAACATTAGAAACTGGATATGTTTTCAGTAAAGATGttaaa
atcaatcaaacatTACAAACTTATGATGATTCGAAGAATACATTCCAACT
CAGTCAAGTTCGTAATATTTCTTTCGATACTGCAGGAGTTGGTATATACG
CTCCGTTAACCAATGAAGGTACTATCATCGTTGACGATGTCTTCGCATCT
TGTTATGCTCTGTTCCCTTCACATAGTGTCTCCCATGCTGTTTTCTGGGT
CTGGAGACAGATATACCCATTCCTGGCAAACTCATCTGAAATTTCCTCCA
AAACGACCCAACAAACTTACCATTGGTATGCCGACTTTCTAAGACAATCA
ATGAATTATTTAAATATCTTCCCCTATCTATTGTAAATGGCAAACCAATT
TATTGGAACACTACTTCTTTGTTTACAATTATTCAAAGTACACCTTGCTT
GTGGGCCTGGCTCTGGCACTTCACGAGGCCGACTTCGCGACCACAATATT
AAAGGAAATCGTTTACCAGATGTACCAGAGTTTTCTACAGCTGCCAGTGG
ACCATTCCCGGGTGCTAAACACCGTACTGATCCAGGATTGGTCGATATTT
TGTCTACTGATATTGTTTTTAAAGATAAATCGTACAATGCTAATGCAAGA
AAATCGATAAAGACTTGTCACAGTTCATTGAAAAAACTTGCTGGTGTTGT
CAAACGCTTCTGGAAAAACAAATACAAAGTCTACGTCCTAGAGGGTTACT
TACCCtacggaaaaaaatcattatataAACATGGAAAACATTCTTTACAT
TATGCTGGCCAAGCTTTTGATATTTCACTGACCAACTCCCCTGAGAATAC
CGATGACCGGCTCGGCGAAGTCGTTCCTGAACATACCTTGAGGACCCTTG
CTGGTTTGGCGTATTACAATGCACAATTTACGTTCGTTCAATTGAAGAAA
AACCATCTGCATGTCTCTTGTGACTCAACAGGACACGAAGTTTCAAGAGG
GCGTTGTTTCAGTGGTGAAAGCTCTGTAAGAACTCCATCCAAAACCATCG
CTATGAAAGATCTCAAAATTGGGGATTCTGTTTTAACAATGAACCCAAAT
GGTCAGCCAACGTTTAGTGAAGTTACCATGATGTTGCATAAAGATGGAAC
AAGATATGTCGAGGACTTTGTCAATATTGAAACCAATTCCGGAAAATCGA
TCACCTTGAGCCCGTATCATTTGATTCAAACATTAGAAACTGGATATGTT
TTCAGTAAAGATGttaaaatcaatcaaacatTACAAACTTATGATGATTC
GAAGAATACATTCCAACTCAGTCAAGTTCGTAATATTTCTTTCGATACTG
CAGGAGTTGGTATATACGCTCCGTTAACCAATGAAGGTACTATCATCGTT
GACGATGTCTTCGCATCTTGTTATGCTCTGTTCCCTTCACATAGTGTCTC
CCATGCTGTTTTCTGGGTCTGGAGACAGATATACCCATTCCTGGCAAACT
CATCTGAAATTTCCTCCAAAACGACCCAACAAACTTACCATTGGTATGCC
GACTTTCTAAGACAATCAATGAATTATTTAAATATCTTCCCCTATCTATT
GTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002634-exon-sc0000021-1491911889:576888..578467 | TCONS_00002634-exon-sc0000021-1491911889:576888..578467 | Clytia hemisphaerica | exon |
| TCONS_00002634-exon-sc0000021-1510915933:576888..578467 | TCONS_00002634-exon-sc0000021-1510915933:576888..578467 | Clytia hemisphaerica | exon |
| TCONS_00002634-exon-sc0000021-1575043694:576888..578467 | TCONS_00002634-exon-sc0000021-1575043694:576888..578467 | Clytia hemisphaerica | exon |
| TCONS_00002634-exon-sc0000021-1491911889:578873..579191 | TCONS_00002634-exon-sc0000021-1491911889:578873..579191 | Clytia hemisphaerica | exon |
| TCONS_00002634-exon-sc0000021-1510915933:578873..579191 | TCONS_00002634-exon-sc0000021-1510915933:578873..579191 | Clytia hemisphaerica | exon |
| TCONS_00002634-exon-sc0000021-1575043694:578873..579191 | TCONS_00002634-exon-sc0000021-1575043694:578873..579191 | Clytia hemisphaerica | exon |
| TCONS_00002634-exon-sc0000021-1491911889:581413..582133 | TCONS_00002634-exon-sc0000021-1491911889:581413..582133 | Clytia hemisphaerica | exon |
| TCONS_00002634-exon-sc0000021-1510915933:581413..582133 | TCONS_00002634-exon-sc0000021-1510915933:581413..582133 | Clytia hemisphaerica | exon |
| TCONS_00002634-exon-sc0000021-1575043694:581413..582133 | TCONS_00002634-exon-sc0000021-1575043694:581413..582133 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000021 | supercontig | sc0000021:576888..582133 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007275 | multicellular organism development |
| GO:0007267 | cell-cell signaling |
| GO:0006508 | proteolysis |
| GO:0016539 | intein-mediated protein splicing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008233 | peptidase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007267 |
cell-cell signaling |
| biological_process |
GO:0016539 |
intein-mediated protein splicing |
| biological_process |
GO:0007275 |
multicellular organism development |
| biological_process |
GO:0006508 |
proteolysis |
| molecular_function |
GO:0008233 |
peptidase activity |
Blast
BLAST of TCONS_00002634 vs. Swiss-Prot (Human)
Match: DHH (Desert hedgehog protein OS=Homo sapiens GN=DHH PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.469e-33 Identity = 112/393 (28.50%), Postives = 182/393 (46.31%), Query Frame = 3
Query: 1365 ACGPGSGTSRGRLRDHN------IKGNRLPDVPEFSTAASGPFPGAKHRTDPGLVDIL---STDIVFKDKSYNANARKSIKTCHSSLKKLAGVVKRFWKNKYKVYVLEGYLPYGKKSLYKHGKHSLHYAGQAFDISLTNSPENTDDRLGEVVPEHTLRTLAGLAYYNAQFTFVQLK-KNHLHVSCDSTGHEVSR-GRCFSGESSVRTPS-KTIAMKDLKIGDSVLTMNPNGQPTFSEVTMMLHKDGTRYVEDFVNIETN-SGKSITLSPYHLIQTL--------ETGYVFSKDVKINQTLQTYDDSKNTFQLSQVRNISFDTAGVGIYAPLTNEGTIIVDDVFASCYALFPSHSVSHAVFWVWRQIYPFLANSSEISSKTTQQT-YHWYADFL 2477
+CGPG G GR R + +P VPE + ASGP G R D++ + DI+FKD+ + R + C + LA V W ++ V EG+ G H + SLHY G+A DI+ ++ N L + E A F +V + +NH+HVS + R G CF G ++VR S + +++L GD VL + +G+ + V + L +D R FV +ET + + L+P+HL+ + VF++ ++ ++ + + ++V ++ + A VG++APLT GT++V+DV ASCYA+ SH +H F R ++ A + + Q T HWY+ L
Sbjct: 22 SCGPGRGPV-GRRRYARKQLVPLLYKQFVPGVPERTLGASGPAEGRVARGSERFRDLVPNYNPDIIFKDEENSGADRLMTERCKERVNALAIAVMNMWPG-VRLRVTEGWDEDGH-----HAQDSLHYEGRALDITTSDRDRNKYGLLARLAVE-------------AGFDWVYYESRNHVHVSVKADNSLAVRAGGCFPGNATVRLWSGERKGLRELHRGDWVLAADASGRVVPTPVLLFLDRDLQRRA-SFVAVETEWPPRKLLLTPWHLVFAARGPAPAPGDFAPVFARRLRAGDSVLA--PGGDALRPARVARVAREEA-VGVFAPLTAHGTLLVNDVLASCYAVLESHQWAHRAFAPLRLLH---ALGALLPGGAVQPTGMHWYSRLL 387
The following BLAST results are available for this feature:
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