TCONS_00002639 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002639
Unique NameTCONS_00002639
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2999

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002639 ID=TCONS_00002639|Name=TCONS_00002639|organism=Clytia hemisphaerica|type=transcript|length=2999bp
CTTGTTGTGTGAGAAAATGCACTGCACGCAAGAAATTATGTGATGTGATT
TTGTGAGTAAATTAAAAAGACAGAAAGCGGAACATATTTCTGGATTAGTA
AGTTTTGTCGACTAAATTACGGTAGGGCAAGAAGGAAACTAATTTTGTGT
CAGGCAAATTTAACAATGTTCCGCTATGTAACTTGTTACATGTGGTTAAT
TCTAATGACAAATACATTGAAAATATGTGCCCGTACAGAGTTCCCGCTTA
TTGAATTCTACAAATCGGTATGGAAGAATATTACAGTACCAGATGATTTA
ACCAATCTGAAAATCAATATGTTATGTAGTGTTGGTAGAAGTGATGATGG
GTGTTGCCAGTGTGGTGATGGTTGTTTTAAAAATGGGAATTGCTGTATTG
ATAAATTATGGGATACATCTAACCCGATACCTTTATCAGAATATATGACT
AAATTTCGTACGAGATATCGAGAAGAGAATACACAATGTCTTCCAGTCAT
GCCTTTTGCGAAAAAATATAAACAGACTTATTATTCAATGATTAACAGTT
GCAATATGGAGTTAGCAGATCAAAATGATATTAACCGTTGTTTTCATGAT
GGGGGACTTGAAGAGTTTGAAAGAGTCCCTGTTTATGGTGTCGATAGCAA
GCTATACAAAAATCGATATTGTGCTCGCTGTAATTTAGTTACTGGTTATA
AAACTGTCAATATAAAACTGTTTTGTCAAGCAGGACCAGGAAACGAGTTT
GCGGTTCGACCAGCACCAGAACCACAACCAGGGCCTGTTTTACCTGGTGT
AACAACCACAACCACCACTACCACCACTACCACCACTACACCTCCACCAC
AAGTTTTGAATCAATTCTCAAGTTGTACTGTCAGCATTGAAGGAATGGGA
AGTTGTTCATCTTCAGataatgctgaatcagcatatGCTTGTACTGATTC
TAAATACTCTGAAGACTGTAACATGTATCGTGGGAGATCAAATTCGGACA
GAAATATACATTgttatctttgtaatcaaaagACACCTAGTATTGATATT
GTACAAGCTATGGCTGAGAACGGTTATTGTGAAAGAAGTGCCCCTAGTGG
ACGTTTTACATGGTCTGTGACAATTTCTTTCTCAGCTGGAGCTACAAAAA
TTGAAACTAGTGGTAGCAGAAACGGTGGTAGCAGTTATGAATATTGCAAA
TCAGGAGAAATATATAGCATCAGTAAGGAACAATGTGTAGAGTTCTCATG
TGCTCCTGGCTACAGAATCGAAGGCACAGAGTGTGTGCAAGAAATCAATT
TTCGTAAAAGTATCAATGTATTGAATCCTGGTTATGGATCATGCTTGACT
GGATCTAACGCATCCTTGTATGTCATTTTCAACCAACAAGGAAGCATCGA
CTTAGAAAACTTTACGAGAGATTTTCAGAGGGATTTCAAAAACGAAAGAG
CAAGTTTCAACAATACTCAAATCAGGgTTTTGAAATGGGAAACACCCATA
ACTCCTTCATCATTCCCAGAGATTGAGGCAGTTCTAAAGAACACTTCACT
TCAAATCTGGAAACACAACATTAACATCACAATATCAACGACCAACATCG
AGACATTAAATGCGTTCGTTGGATTCGATTTATCCAAATACTCAAATCAA
GGAAAACTATGTGCTTCAAGTAGCGAGTATGATTTAAGCACTGGTAATTT
TACCAAAACCTGCAGGtttaaaatatcgaaaaatggACCAGTTTTAGATA
GACACGATTTAACCTTGATATCACATTTCACTCGAAACAATATCCATGAA
CAAATATATCATTGCAATTCGTATTACTTGTCACAATCGTGCCCACGAAT
AACAGTTACCAAAAATATCACCACATTCGATCCAATGACCAACCAACTTG
AACTCAAAACTGTTCAGAACGAAACCAAAATCTTGAATCACACTGAATTC
ATTCCAAAAGATCACCAGTCATTTTATATCTGTGCTTCTGAACAAAATCC
TTCCCCGACATCACAACTGAGTACCGGATTTCGGTATAATTGGCAGAAAC
CATTAAACGAAGCTGAATATTATATCAGTATAATGTTGGTGGTCATAAGC
ATAATTTTCGAACTCATTTTCATTCTCACAATGGCTTTATTCAGAGAACG
TCGTAACACGGGTAGCATTAACGTCTTATGCATGGTTTGCATAATCCTAA
TAGTAGATGTTACTTATCTTCTAGCTGTTACGTTGGGTGAACACTATTCG
TCCGCGTGTGAAGTTTTAGGAATCCTTCTACACTTAGGTCTTGTTTTGAT
TGGTTTATGGGCGACCGGTTTGGCTTTAGATATCGTGAGTACATTTTTAC
GGAAACATAAAAGTAGAGGAAGTCGGTTTGTGGGGAGAGTTTTCTTTGGA
AGATTATTGACATGTTTTTTAATCGCAATCATTCTTGTCGGTACCTGTGT
CgcattgaatgaaaaagatatcATTGATTTTAAGTATGGTATTAATAATA
TTTGCTGGATAGGAGGATACTACCCGAGATTATACTTTTATTTAATCCCG
ACAATTGTATTTTTTACAATCGGTGTCGTGTCTTTATCCTGTGTGTTGTG
TCATTTGTATCGCCAAGAGCAGGAGCAAAGGAAAAGTCTTAAAGATAGCG
GTAGAACAAACGTCGATTTAGTTGCAATCAGTATCAAACTATTAGTCTTA
CTGGGACTTGCTGAAATACTTGGACTcgtacaaattttcaaaacaaactt
aacTGAAGATGAACTTATTGTAAATTCGATTTTTGGTTTCTTGTATACAA
TCGTTAGAAGTGTCCGTGGTACTTTAGTATTTTGGCTTTACCTTGGCAAC
AAGAAAACATTGGATTTATATAAGAAAACAATGAAGACCAGCCAACATAG
TGACTCAGATGGACCTTATAAATTAACACAAATTACACGCTTAGGTGGTG
GAAATTCAGCAACTAGTTCTCCAGCTTTATCTTCGTTTGGAAGAGACTg
Run BLAST on NCBI

protein sequence of TCONS_00002639-protein

>TCONS_00002639-protein ID=TCONS_00002639-protein|Name=TCONS_00002639-protein|organism=Clytia hemisphaerica|type=polypeptide|length=944bp
MFRYVTCYMWLILMTNTLKICARTEFPLIEFYKSVWKNITVPDDLTNLKI
NMLCSVGRSDDGCCQCGDGCFKNGNCCIDKLWDTSNPIPLSEYMTKFRTR
YREENTQCLPVMPFAKKYKQTYYSMINSCNMELADQNDINRCFHDGGLEE
FERVPVYGVDSKLYKNRYCARCNLVTGYKTVNIKLFCQAGPGNEFAVRPA
PEPQPGPVLPGVTTTTTTTTTTTTTPPPQVLNQFSSCTVSIEGMGSCSSS
DNAESAYACTDSKYSEDCNMYRGRSNSDRNIHCYLCNQKTPSIDIVQAMA
ENGYCERSAPSGRFTWSVTISFSAGATKIETSGSRNGGSSYEYCKSGEIY
SISKEQCVEFSCAPGYRIEGTECVQEINFRKSINVLNPGYGSCLTGSNAS
LYVIFNQQGSIDLENFTRDFQRDFKNERASFNNTQIRVLKWETPITPSSF
PEIEAVLKNTSLQIWKHNINITISTTNIETLNAFVGFDLSKYSNQGKLCA
SSSEYDLSTGNFTKTCRFKISKNGPVLDRHDLTLISHFTRNNIHEQIYHC
NSYYLSQSCPRITVTKNITTFDPMTNQLELKTVQNETKILNHTEFIPKDH
QSFYICASEQNPSPTSQLSTGFRYNWQKPLNEAEYYISIMLVVISIIFEL
IFILTMALFRERRNTGSINVLCMVCIILIVDVTYLLAVTLGEHYSSACEV
LGILLHLGLVLIGLWATGLALDIVSTFLRKHKSRGSRFVGRVFFGRLLTC
FLIAIILVGTCVALNEKDIIDFKYGINNICWIGGYYPRLYFYLIPTIVFF
TIGVVSLSCVLCHLYRQEQEQRKSLKDSGRTNVDLVAISIKLLVLLGLAE
ILGLVQIFKTNLTEDELIVNSIFGFLYTIVRSVRGTLVFWLYLGNKKTLD
LYKKTMKTSQHSDSDGPYKLTQITRLGGGNSATSSPALSSFGRD
Run BLAST on NCBI

transcript from alignment at sc0000021:625289..628479+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002639 ID=TCONS_00002639|Name=TCONS_00002639|organism=Clytia hemisphaerica|type=transcript|length=3191bp|location=Sequence derived from alignment at sc0000021:625289..628479+ (Clytia hemisphaerica)
CTTGTTGTGTGAGAAAATGCACTGCACGCAAGAAATTATGTGATGTGATT TTGTGAGTAAATTAAAAAGACAGAAAGCGGAACATATTTCTGGATTAGTA AGTTTTGTCGACTAAATTACGGTAGGGCAAGAAGGAAACTAATTTTGTGT CAGGCAAATTTAACAATGTTCCGCTATGTAACTTGTTACATGTGGTTAAT TCTAATGACAAATACATTGAAAATATGTGCCCGTACAGAGTTCCCGCTTA TTGAATTCTACAAATCGGTATGGAAGAATATTACAGTACCAGATGATTTA ACCAATCTGAAAATCAATATGTTATGTAGTGTTGGTAGAAGTGATGATGG GTGTTGCCAGTGTGGTGATGGTTGTTTTAAAAATGGGAATTGCTGTATTG ATAAATTATGGGATACATCTAACCCGATACCTTTATCAGAATATATGACT AAATTTCGTACGAGATATCGAGAAGAGAATACACAATGTCTTCCAGTCAT GCCTTTTGCGAAAAAATATAAACAGACTTATTATTCAATGATTAACAGTT GCAATATGGAGTTAGCAGATCAAAATGATATTAACCGTTGTTTTCATGAT GGGGGACTTGAAGAGTTTGAAAGAGTCCCTGTTTATGGTGTCGATAGCAA GCTATACAAAAATCGATATTGTGCTCGCTGTAATTTAGTTACTGGTTATA AAACTGTCAATATAAAACTGTTTTGTCAAGCAGGACCAGGAAACGAGTTT GCGGTTCGACCAGCACCAGAACCACAACCAGGGCCTGTTTTACCTGGTGT AACAACCACAACCACCACTACCACCACTACCACCACTACACCTCCACCAC AAGTTTTGAATCAATTCTCAAGTTGTACTGTCAGCATTGAAGGAATGGGA AGTTGTTCATCTTCAGataatgctgaatcagcatatGCTTGTACTGATTC TAAATACTCTGAAGACTGTAACATGTATCGTGGGAGATCAAATTCGGACA GAAATATACATTgttatctttgtaatcaaaagACACCTAGTATTGATATT GTACAAGCTATGGCTGAGAACGGTTATTGTGAAAGAAGTGCCCCTAGTGG ACGTTTTACATGGTCTGTGACAATTTCTTTCTCAGCTGGAGCTACAAAAA TTGAAACTAGTGGTAGCAGAAACGGTGGTAGCAGTTATGAATATTGCAAA TCAGGAGAAATATATAGCATCAGTAAGGAACAATGTGTAGAGTTCTCATG TGCTCCTGGCTACAGAATCGAAGGCACAGAGTGTGTGCAAGAAATCAATT TTCGTAAAAGTATCAATGTATTGAATCCTGGTTATGGATCATGCTTGACT GGATCTAACGCATCCTTGTATGTCATTTTCAACCAACAAGGAAGCATCGA CTTAGAAAACTTTACGAGAGATTTTCAGAGGGATTTCAAAAACGAAAGAG CAAGTTTCAACAATACTCAAATCAGGGtatggaaaatattttagattttg caTTTGGCTGGATCTATATTTTTCTTGTTAGGCTCAAAATTTCACTAGTT AAAAGTAAATCTTCGCTAAATATTgttttctgacagggtccattttttAA GCTCTGTGCGTCGTGTGATCTGAATCGTCAATTTTCTAATACTAGACATG ttaattatttcattttaggTTTTGAAATGGGAAACACCCATAACTCCTTC ATCATTCCCAGAGATTGAGGCAGTTCTAAAGAACACTTCACTTCAAATCT GGAAACACAACATTAACATCACAATATCAACGACCAACATCGAGACATTA AATGCGTTCGTTGGATTCGATTTATCCAAATACTCAAATCAAGGAAAACT ATGTGCTTCAAGTAGCGAGTATGATTTAAGCACTGGTAATTTTACCAAAA CCTGCAGGtttaaaatatcgaaaaatggACCAGTTTTAGATAGACACGAT TTAACCTTGATATCACATTTCACTCGAAACAATATCCATGAACAAATATA TCATTGCAATTCGTATTACTTGTCACAATCGTGCCCACGAATAACAGTTA CCAAAAATATCACCACATTCGATCCAATGACCAACCAACTTGAACTCAAA ACTGTTCAGAACGAAACCAAAATCTTGAATCACACTGAATTCATTCCAAA AGATCACCAGTCATTTTATATCTGTGCTTCTGAACAAAATCCTTCCCCGA CATCACAACTGAGTACCGGATTTCGGTATAATTGGCAGAAACCATTAAAC GAAGCTGAATATTATATCAGTATAATGTTGGTGGTCATAAGCATAATTTT CGAACTCATTTTCATTCTCACAATGGCTTTATTCAGAGAACGTCGTAACA CGGGTAGCATTAACGTCTTATGCATGGTTTGCATAATCCTAATAGTAGAT GTTACTTATCTTCTAGCTGTTACGTTGGGTGAACACTATTCGTCCGCGTG TGAAGTTTTAGGAATCCTTCTACACTTAGGTCTTGTTTTGATTGGTTTAT GGGCGACCGGTTTGGCTTTAGATATCGTGAGTACATTTTTACGGAAACAT AAAAGTAGAGGAAGTCGGTTTGTGGGGAGAGTTTTCTTTGGAAGATTATT GACATGTTTTTTAATCGCAATCATTCTTGTCGGTACCTGTGTCgcattga atgaaaaagatatcATTGATTTTAAGTATGGTATTAATAATATTTGCTGG ATAGGAGGATACTACCCGAGATTATACTTTTATTTAATCCCGACAATTGT ATTTTTTACAATCGGTGTCGTGTCTTTATCCTGTGTGTTGTGTCATTTGT ATCGCCAAGAGCAGGAGCAAAGGAAAAGTCTTAAAGATAGCGGTAGAACA AACGTCGATTTAGTTGCAATCAGTATCAAACTATTAGTCTTACTGGGACT TGCTGAAATACTTGGACTcgtacaaattttcaaaacaaacttaacTGAAG ATGAACTTATTGTAAATTCGATTTTTGGTTTCTTGTATACAATCGTTAGA AGTGTCCGTGGTACTTTAGTATTTTGGCTTTACCTTGGCAACAAGAAAAC ATTGGATTTATATAAGAAAACAATGAAGACCAGCCAACATAGTGACTCAG ATGGACCTTATAAATTAACACAAATTACACGCTTAGGTGGTGGAAATTCA GCAACTAGTTCTCCAGCTTTATCTTCGTTTGGAAGAGACTg

Coding sequence (CDS) from alignment at sc0000021:625289..628479+

>TCONS_00002639 ID=TCONS_00002639|Name=TCONS_00002639|organism=Clytia hemisphaerica|type=CDS|length=5664bp|location=Sequence derived from alignment at sc0000021:625289..628479+ (Clytia hemisphaerica)
ATGTTCCGCTATGTAACTTGTTACATGTGGTTAATTCTAATGACAAATAC
ATTGAAAATATGTGCCCGTACAGAGTTCCCGCTTATTGAATTCTACAAAT
CGGTATGGAAGAATATTACAGTACCAGATGATTTAACCAATCTGAAAATC
AATATGTTATGTAGTGTTGGTAGAAGTGATGATGGGTGTTGCCAGTGTGG
TGATGGTTGTTTTAAAAATGGGAATTGCTGTATTGATAAATTATGGGATA
CATCTAACCCGATACCTTTATCAGAATATATGACTAAATTTCGTACGAGA
TATCGAGAAGAGAATACACAATGTCTTCCAGTCATGCCTTTTGCGAAAAA
ATATAAACAGACTTATTATTCAATGATTAACAGTTGCAATATGGAGTTAG
CAGATCAAAATGATATTAACCGTTGTTTTCATGATGGGGGACTTGAAGAG
TTTGAAAGAGTCCCTGTTTATGGTGTCGATAGCAAGCTATACAAAAATCG
ATATTGTGCTCGCTGTAATTTAGTTACTGGTTATAAAACTGTCAATATAA
AACTGTTTTGTCAAGCAGGACCAGGAAACGAGTTTGCGGTTCGACCAGCA
CCAGAACCACAACCAGGGCCTGTTTTACCTGGTGTAACAACCACAACCAC
CACTACCACCACTACCACCACTACACCTCCACCACAAGTTTTGAATCAAT
TCTCAAGTTGTACTGTCAGCATTGAAGGAATGGGAAGTTGTTCATCTTCA
GataatgctgaatcagcatatGCTTGTACTGATTCTAAATACTCTGAAGA
CTGTAACATGTATCGTGGGAGATCAAATTCGGACAGAAATATACATTgtt
atctttgtaatcaaaagACACCTAGTATTGATATTGTACAAGCTATGGCT
GAGAACGGTTATTGTGAAAGAAGTGCCCCTAGTGGACGTTTTACATGGTC
TGTGACAATTTCTTTCTCAGCTGGAGCTACAAAAATTGAAACTAGTGGTA
GCAGAAACGGTGGTAGCAGTTATGAATATTGCAAATCAGGAGAAATATAT
AGCATCAGTAAGGAACAATGTGTAGAGTTCTCATGTGCTCCTGGCTACAG
AATCGAAGGCACAGAGTGTGTGCAAGAAATCAATTTTCGTAAAAGTATCA
ATGTATTGAATCCTGGTTATGGATCATGCTTGACTGGATCTAACGCATCC
TTGTATGTCATTTTCAACCAACAAGGAAGCATCGACTTAGAAAACTTTAC
GAGAGATTTTCAGAGGGATTTCAAAAACGAAAGAGCAAGTTTCAACAATA
CTCAAATCAGGgTTTTGAAATGGGAAACACCCATAACTCCTTCATCATTC
CCAGAGATTGAGGCAGTTCTAAAGAACACTTCACTTCAAATCTGGAAACA
CAACATTAACATCACAATATCAACGACCAACATCGAGACATTAAATGCGT
TCGTTGGATTCGATTTATCCAAATACTCAAATCAAGGAAAACTATGTGCT
TCAAGTAGCGAGTATGATTTAAGCACTGGTAATTTTACCAAAACCTGCAG
GtttaaaatatcgaaaaatggACCAGTTTTAGATAGACACGATTTAACCT
TGATATCACATTTCACTCGAAACAATATCCATGAACAAATATATCATTGC
AATTCGTATTACTTGTCACAATCGTGCCCACGAATAACAGTTACCAAAAA
TATCACCACATTCGATCCAATGACCAACCAACTTGAACTCAAAACTGTTC
AGAACGAAACCAAAATCTTGAATCACACTGAATTCATTCCAAAAGATCAC
CAGTCATTTTATATCTGTGCTTCTGAACAAAATCCTTCCCCGACATCACA
ACTGAGTACCGGATTTCGGTATAATTGGCAGAAACCATTAAACGAAGCTG
AATATTATATCAGTATAATGTTGGTGGTCATAAGCATAATTTTCGAACTC
ATTTTCATTCTCACAATGGCTTTATTCAGAGAACGTCGTAACACGGGTAG
CATTAACGTCTTATGCATGGTTTGCATAATCCTAATAGTAGATGTTACTT
ATCTTCTAGCTGTTACGTTGGGTGAACACTATTCGTCCGCGTGTGAAGTT
TTAGGAATCCTTCTACACTTAGGTCTTGTTTTGATTGGTTTATGGGCGAC
CGGTTTGGCTTTAGATATCGTGAGTACATTTTTACGGAAACATAAAAGTA
GAGGAAGTCGGTTTGTGGGGAGAGTTTTCTTTGGAAGATTATTGACATGT
TTTTTAATCGCAATCATTCTTGTCGGTACCTGTGTCgcattgaatgaaaa
agatatcATTGATTTTAAGTATGGTATTAATAATATTTGCTGGATAGGAG
GATACTACCCGAGATTATACTTTTATTTAATCCCGACAATTGTATTTTTT
ACAATCGGTGTCGTGTCTTTATCCTGTGTGTTGTGTCATTTGTATCGCCA
AGAGCAGGAGCAAAGGAAAAGTCTTAAAGATAGCGGTAGAACAAACGTCG
ATTTAGTTGCAATCAGTATCAAACTATTAGTCTTACTGGGACTTGCTGAA
ATACTTGGACTcgtacaaattttcaaaacaaacttaacTGAAGATGAACT
TATTGTAAATTCGATTTTTGGTTTCTTGTATACAATCGTTAGAAGTGTCC
GTGGTACTTTAGTATTTTGGCTTTACCTTGGCAACAAGAAAACATTGGAT
TTATATAAGAAAACAATGAAGACCAGCCAACATAGTGACTCAGATGGACC
TTATAAATTAACACAAATTACACGCTTAGGTGGTGGAAATTCAGCAACTA
GTTCTCCAGCTTTATCTTCGTTTGGAAGAGACATGTTCCGCTATGTAACT
TGTTACATGTGGTTAATTCTAATGACAAATACATTGAAAATATGTGCCCG
TACAGAGTTCCCGCTTATTGAATTCTACAAATCGGTATGGAAGAATATTA
CAGTACCAGATGATTTAACCAATCTGAAAATCAATATGTTATGTAGTGTT
GGTAGAAGTGATGATGGGTGTTGCCAGTGTGGTGATGGTTGTTTTAAAAA
TGGGAATTGCTGTATTGATAAATTATGGGATACATCTAACCCGATACCTT
TATCAGAATATATGACTAAATTTCGTACGAGATATCGAGAAGAGAATACA
CAATGTCTTCCAGTCATGCCTTTTGCGAAAAAATATAAACAGACTTATTA
TTCAATGATTAACAGTTGCAATATGGAGTTAGCAGATCAAAATGATATTA
ACCGTTGTTTTCATGATGGGGGACTTGAAGAGTTTGAAAGAGTCCCTGTT
TATGGTGTCGATAGCAAGCTATACAAAAATCGATATTGTGCTCGCTGTAA
TTTAGTTACTGGTTATAAAACTGTCAATATAAAACTGTTTTGTCAAGCAG
GACCAGGAAACGAGTTTGCGGTTCGACCAGCACCAGAACCACAACCAGGG
CCTGTTTTACCTGGTGTAACAACCACAACCACCACTACCACCACTACCAC
CACTACACCTCCACCACAAGTTTTGAATCAATTCTCAAGTTGTACTGTCA
GCATTGAAGGAATGGGAAGTTGTTCATCTTCAGataatgctgaatcagca
tatGCTTGTACTGATTCTAAATACTCTGAAGACTGTAACATGTATCGTGG
GAGATCAAATTCGGACAGAAATATACATTgttatctttgtaatcaaaagA
CACCTAGTATTGATATTGTACAAGCTATGGCTGAGAACGGTTATTGTGAA
AGAAGTGCCCCTAGTGGACGTTTTACATGGTCTGTGACAATTTCTTTCTC
AGCTGGAGCTACAAAAATTGAAACTAGTGGTAGCAGAAACGGTGGTAGCA
GTTATGAATATTGCAAATCAGGAGAAATATATAGCATCAGTAAGGAACAA
TGTGTAGAGTTCTCATGTGCTCCTGGCTACAGAATCGAAGGCACAGAGTG
TGTGCAAGAAATCAATTTTCGTAAAAGTATCAATGTATTGAATCCTGGTT
ATGGATCATGCTTGACTGGATCTAACGCATCCTTGTATGTCATTTTCAAC
CAACAAGGAAGCATCGACTTAGAAAACTTTACGAGAGATTTTCAGAGGGA
TTTCAAAAACGAAAGAGCAAGTTTCAACAATACTCAAATCAGGgTTTTGA
AATGGGAAACACCCATAACTCCTTCATCATTCCCAGAGATTGAGGCAGTT
CTAAAGAACACTTCACTTCAAATCTGGAAACACAACATTAACATCACAAT
ATCAACGACCAACATCGAGACATTAAATGCGTTCGTTGGATTCGATTTAT
CCAAATACTCAAATCAAGGAAAACTATGTGCTTCAAGTAGCGAGTATGAT
TTAAGCACTGGTAATTTTACCAAAACCTGCAGGtttaaaatatcgaaaaa
tggACCAGTTTTAGATAGACACGATTTAACCTTGATATCACATTTCACTC
GAAACAATATCCATGAACAAATATATCATTGCAATTCGTATTACTTGTCA
CAATCGTGCCCACGAATAACAGTTACCAAAAATATCACCACATTCGATCC
AATGACCAACCAACTTGAACTCAAAACTGTTCAGAACGAAACCAAAATCT
TGAATCACACTGAATTCATTCCAAAAGATCACCAGTCATTTTATATCTGT
GCTTCTGAACAAAATCCTTCCCCGACATCACAACTGAGTACCGGATTTCG
GTATAATTGGCAGAAACCATTAAACGAAGCTGAATATTATATCAGTATAA
TGTTGGTGGTCATAAGCATAATTTTCGAACTCATTTTCATTCTCACAATG
GCTTTATTCAGAGAACGTCGTAACACGGGTAGCATTAACGTCTTATGCAT
GGTTTGCATAATCCTAATAGTAGATGTTACTTATCTTCTAGCTGTTACGT
TGGGTGAACACTATTCGTCCGCGTGTGAAGTTTTAGGAATCCTTCTACAC
TTAGGTCTTGTTTTGATTGGTTTATGGGCGACCGGTTTGGCTTTAGATAT
CGTGAGTACATTTTTACGGAAACATAAAAGTAGAGGAAGTCGGTTTGTGG
GGAGAGTTTTCTTTGGAAGATTATTGACATGTTTTTTAATCGCAATCATT
CTTGTCGGTACCTGTGTCgcattgaatgaaaaagatatcATTGATTTTAA
GTATGGTATTAATAATATTTGCTGGATAGGAGGATACTACCCGAGATTAT
ACTTTTATTTAATCCCGACAATTGTATTTTTTACAATCGGTGTCGTGTCT
TTATCCTGTGTGTTGTGTCATTTGTATCGCCAAGAGCAGGAGCAAAGGAA
AAGTCTTAAAGATAGCGGTAGAACAAACGTCGATTTAGTTGCAATCAGTA
TCAAACTATTAGTCTTACTGGGACTTGCTGAAATACTTGGACTcgtacaa
attttcaaaacaaacttaacTGAAGATGAACTTATTGTAAATTCGATTTT
TGGTTTCTTGTATACAATCGTTAGAAGTGTCCGTGGTACTTTAGTATTTT
GGCTTTACCTTGGCAACAAGAAAACATTGGATTTATATAAGAAAACAATG
AAGACCAGCCAACATAGTGACTCAGATGGACCTTATAAATTAACACAAAT
TACACGCTTAGGTGGTGGAAATTCAGCAACTAGTTCTCCAGCTTTATCTT
CGTTTGGAAGAGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001428XLOC_001428Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002639-proteinTCONS_00002639-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002639-exon-sc0000021-1491911889:625289..626764TCONS_00002639-exon-sc0000021-1491911889:625289..626764Clytia hemisphaericaexon
TCONS_00002639-exon-sc0000021-1510915933:625289..626764TCONS_00002639-exon-sc0000021-1510915933:625289..626764Clytia hemisphaericaexon
TCONS_00002639-exon-sc0000021-1575043694:625289..626764TCONS_00002639-exon-sc0000021-1575043694:625289..626764Clytia hemisphaericaexon
TCONS_00002639-exon-sc0000021-1491911889:626957..628479TCONS_00002639-exon-sc0000021-1491911889:626957..628479Clytia hemisphaericaexon
TCONS_00002639-exon-sc0000021-1510915933:626957..628479TCONS_00002639-exon-sc0000021-1510915933:626957..628479Clytia hemisphaericaexon
TCONS_00002639-exon-sc0000021-1575043694:626957..628479TCONS_00002639-exon-sc0000021-1575043694:626957..628479Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:625289..628479 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.966419 0.706808 0.460728 0.323977 24.2648 17.9955 20.2394 22.6058 7.67234 21.9004 9.50769 12.3645 13.379 10.8027 3.81969 3.53345 3.64653 3.9039 8.77281 12.9851 0.909799 0.88154 2.47859 2.2534 1.16047 1.49871 14.1233 9.45306 2.46992 2.61711
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000832GPCR_2_secretin-like
IPR017981GPCR_2-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007166cell surface receptor signaling pathway
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0004888 transmembrane signaling receptor activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002639 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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