|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002672 ID=TCONS_00002672|Name=TCONS_00002672|organism=Clytia hemisphaerica|type=transcript|length=3709bp tctcagaaatttatAGAGAATGTagttaaaaaagaagaagaaaaggaaga ccTGACAGGCTGATATCAATATGTCTTCAACTAATTCTCTATCAAGCGTA TCCACTCAAACTTTCCTCACTTCACTGGATTCAACGGATCTGAAAGCCAT AGAAGACACTTTTCATTCCTTTAGTGGGAAAAATTTGGTTAACAAGTCAG AATTTGGTGTTATGTTATCACAGGCGTTAAATAAAGGAACTTTAGTGGAT TACTACCAATTATTTGATATGGTTGATATTTCACGCGAGGGCTTAATCAA CTGGGATCGATTCTCGAATTATTTGTTATTAGAATATTATGAACGTGAAG ATCGAATCAAAACAACACAAGTTCCACAATGGCAAGACATTAGAAGTATA CCGACCTCACATAAGAATTCCATatgttgtattttacagaacacgAATAA CGGCTTTCGTTATTGCACAGTTAGTAAGGATGGTCTAGTCAGTGTTTTTA CCGATCGCCATGAAGTGAAACGCACCTGTCAAATACATACAAACCCTGAA GAAATTCGAAGTAAAGACTTATGGGTCACTGATGCCACACTTATgccaaa cataaacaaaatagCTTTTGCAACAACCAgccgtgaaatttggatttatG ATATGTCTTTAAACAATGAATTTGTTTGCCAGTATAAAATCACTGGTTTG AAGTTTATACCTCTCTGTATCAACTATTGgagcaataaaaacaataataa tagTGCTTTGTTAACGTTTGGTGATACAGGTGGTTTTATACATGCTAtat ttttcaactcaacaacGTCTACATTATTTGATAAACCGTGGAAATCAGAA CAAAGTCAAGAAGTGTGTTTCCAAGTTAACATTGGTACTATACTAAGTGG TAGGTTTGCATCTGCTTCTTGTTTACATTATAAAGCACATTCAGCCTGGG TACGCCAaatcatgtttataccattgcTAGATTGTTTTCTCACATGCTCA ACAACTTCAAACGATTCAATCGTTCTTGCTTGGCTTGGTAAATCACGCAA GGATGTTCGATTGACTGAATTTAAAATCCCACTTGGTATAAATGGTTTCG ATTATCAAGAAAGTATGAACCTAATCGCCTCAGCTGGTATCAATAATCAT GTTTGTTTATGGAATCCATATGTTGTTTCCAAACCGATTGGGATACTCCG TGGTCACATGCAAGTGATTGTCGCTGTTCAGTTCATTCATAATAAATATC AACTGGTCAGTTTATCTAAAGATAAAGTTCTGAGAATATGGGATGTCAAT TTGCAAATTTGCATTCAACGTCTAACTGGAATCTTTCCAAAAGGTCCTGA CGTTAATATTCTCATGCACTATGACCAAGAAGCTTCAGCACTATTCAGTA CGTTCAATTACCATTTCCAAGTGTTGAAAATGAAACGCGAAGTGAAACAT CGTGTGGTTAGTCACGATTCGTCTGTCACAGAAGCTATTTACAATGAGAA ATATGGTCACGTGATTAGCGTGGACGAATCATCTTGCATCACTATTTGGT TTCTGAATACTGGTCAAAAGGTCAAACAAATCAGCGAAGCGCATGGTGAA GCAGAACTAACCACCGTCTGTCTCGACCACACACAAACTAGAATCTTGAC CGCAGGAACGGATGGAGTTATCAAAATCTGGGACATCAACGGTAATTGTC ATCACATCTTAGTTGTTGAGAAAGGAAACCCATGTGAAATTACACAGATC GTGTATTTAAAACGTATGATCTTAGCTATCGGTTGGAGTCGTATTCTATG TTATTTTCCTTCAACACAACTGAAGACTTATTATGTCTATCCGGctgatt ggaaaggtaaacaggAGCATTTTGACGATATCTTATCGGCTGATTTCTCA GAGCCTCGTACCTTAGTAACTGCCAGTTACGATGGAGATATTGTATTTTG GAATACAAACACGCAGAACTCGATTCGAAAAATCACTAACGAAAATAAAT CAAGACTGGGGAATCGATTACCGCCTTTATCGCCTCGTAAAAGTCGTCAG GAGAGACGCAACGAGTCTAGCATGTCTACAAAAAGTAACAAATTGTTAAC ACCTCACTCTCCGCTGAGATCCGCATGCCTCGATGAAAACACAGCATCCT CAATCACTGTAACTTCGATCGCttatctgaaaaaaagaaacaccaacAGC CCAAGAACTGCAGATCTTTACTCTTGTCATTCAGATGGCCGTGTCAGATT CTGGAATAGTCTAACGTGTGAAAATCTTGGATCGTTTGCGGTCTACGAGC AGTTTGGATCTTTAGTCTCGTGTATAAACTCAACAAACGAACTTTTATGC GTCGGTGGTGAAAACGGAACATGCAAAATATTCTTCATCGATGATTTTCT GAACGACAAAAAACATGACGTCACCATACCTCTACATTCCGACGCAAACG AACATGAACCACCACAACTATTGGCCATGTTTTCAACCCACACTGATGTC ATCACCTCAGTTAAATTCATCGAACGAAACGgtaaaattcttcttttatc gTCGTCTACAGATTGTTCAGTGGCCATTCATTCTCTTGATTTCTTGATCG GTATATTTGGTCAAAAGGATCACTGGAATGTGAATGATGTACCAGGGATT TCTGTCAATGATNCTTTGGTCAAAAGGAGCACTGGAATGTGAATGATGTA CCAGGGATTTTGGTCAATGATTGGATCACCAAAAGACAGAACGATATCAA CAGACGGACGAGCATTCAACATGATTTCGATTGTGACGCTGACAACGAAG AAGAACTTGAATcACTCGAAAAAGAATCTGAAATCGTAATTGAAGTACCG AGCAACAACAAAACAAATGCTACAAAGGACGAAAAACCATACAGTAACAC TACTACAACTGAGTTTTGGAATCAGCCTGAAATCCAACAAGTAGTCGATG AAATCAACAAATCAAAGCTGgattcaaatcaaaacaacaatcgaaccaat cgtcTTCCAATTGATGGCAAACGGAATTGCTCATATAGTTCTTTGGCAAC CAAACAAATGGCCAACATTAAGGAACTTGAAAAACCAGAATTCGTTTTAC ACCCTGAACgttattttcttgaaaaagacGATAAGAATACTTTGGATATA TTTTCAGATGCTCCAAAGGAATACACTCACGATGTCAAGTTAAAACATGA TGAGAAAAGTATTTTCCCGAAATATATTTTAGATATGGATATGAAAATGA GAACTGCTCATAAATTAATGGTCACCAAACAACCGACCAAATTGAGTTTA CACCGTGGTGGTAAAAATATGTCAAGACGTTCAACTTTGTTGAGTACTCA AAGGAACAATACCTCAGATAATGGTTTCGGTGATTGAGTGTTGTTGAACC AAATTATTGAGATTACCCCCTGGATACCCGGAGGGgctacttaggcaaat ggagggtatggTATGTGCCgtccttaagggtaccttttttggatttccaa agtcccgctaagggtcggaaaaaccagaaaatcaaattttagtcccgcta agggtcggagaaataggaaaattttacttttcacttctgaaagatcgaaa tttggtcaaaattgtcccagtaagggtcgtaaaatttacaaaattttcct gttatctcctttttagtcccggtaagggtccaagggtcgaaagttgggcg gtacccccc Run BLAST on NCBI protein sequence of TCONS_00002672-protein >TCONS_00002672-protein ID=TCONS_00002672-protein|Name=TCONS_00002672-protein|organism=Clytia hemisphaerica|type=polypeptide|length=873bp
MSSTNSLSSVSTQTFLTSLDSTDLKAIEDTFHSFSGKNLVNKSEFGVMLS QALNKGTLVDYYQLFDMVDISREGLINWDRFSNYLLLEYYEREDRIKTTQ VPQWQDIRSIPTSHKNSICCILQNTNNGFRYCTVSKDGLVSVFTDRHEVK RTCQIHTNPEEIRSKDLWVTDATLMPNINKIAFATTSREIWIYDMSLNNE FVCQYKITGLKFIPLCINYWSNKNNNNSALLTFGDTGGFIHAIFFNSTTS TLFDKPWKSEQSQEVCFQVNIGTILSGRFASASCLHYKAHSAWVRQIMFI PLLDCFLTCSTTSNDSIVLAWLGKSRKDVRLTEFKIPLGINGFDYQESMN LIASAGINNHVCLWNPYVVSKPIGILRGHMQVIVAVQFIHNKYQLVSLSK DKVLRIWDVNLQICIQRLTGIFPKGPDVNILMHYDQEASALFSTFNYHFQ VLKMKREVKHRVVSHDSSVTEAIYNEKYGHVISVDESSCITIWFLNTGQK VKQISEAHGEAELTTVCLDHTQTRILTAGTDGVIKIWDINGNCHHILVVE KGNPCEITQIVYLKRMILAIGWSRILCYFPSTQLKTYYVYPADWKGKQEH FDDILSADFSEPRTLVTASYDGDIVFWNTNTQNSIRKITNENKSRLGNRL PPLSPRKSRQERRNESSMSTKSNKLLTPHSPLRSACLDENTASSITVTSI AYLKKRNTNSPRTADLYSCHSDGRVRFWNSLTCENLGSFAVYEQFGSLVS CINSTNELLCVGGENGTCKIFFIDDFLNDKKHDVTIPLHSDANEHEPPQL LAMFSTHTDVITSVKFIERNGKILLLSSSTDCSVAIHSLDFLIGIFGQKD HWNVNDVPGISVNDXLVKRSTGM Run BLAST on NCBI transcript from alignment at sc0000021:291812..298330- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002672 ID=TCONS_00002672|Name=TCONS_00002672|organism=Clytia hemisphaerica|type=transcript|length=6519bp|location=Sequence derived from alignment at sc0000021:291812..298330- (Clytia hemisphaerica) TCTCAGAAATTTATAGAGAATGTAGTTAAAAAAGAAGAAGAAAAGGAAGA
CCTGACAGGCTGATATCAATATGTCTTCAACTAATTCTCTATCAAGCGTA
TCCACTCAAACTTTCCTCACTTCACTGGATTCAACGGATCTGAAAGCCAT
AGAAGACACTTTTCATTCCTTTAGTGGGAAAAATTTGGTTAACAAGTCAG
AATTTGGTGTTATGTTATCACAGGCGTTAAATAAAGGAACTTTAGTGGAT
TACTACCAATTATTTGATATGGTTGATATTTCACGCGAGGGCTTAATCAA
CTGGGATCGATTCTCGAATTATTTGTTATTAGAATATTATGAACGTGAAG
ATCGAATCAAAACAACACAAGTTCCACAATGGCAAGACATTAGAAGTATA
CCGACCTCACATAAGAATTCCATATGTTGTATTTTACAGAACACGAATAA
CGGCTTTCGTTATTGCACAGTTAGTAAGGATGGTCTAGTCAGTGTTTTTA
CCGATCGCCATGAAGTGAAACGCACCTGTCAAATACATACAAACCCTGAA
GAAATTCGAAGTAAAGACTTATGGGTCACTGATGCCACACTTATGCCAAA
CATAAACAAAATAGCTTTTGCAACAACCAGCCGTGAAATTTGGATTTATG
ATATGTCTTTAAACAATGAATTTGTTTGCCAGTATAAAATCACTGGTTTG
AAGTTTATACCTCTCTGTATCAACTATTGGAGCAATAAAAACAATAATAA
TAGTGCTTTGTTAACGTTTGGTGATACAGGTGGTTTTATACATGCTATAT
TTTTCAACTCAACAACGTCTACATTATTTGATAAACCGTGGAAATCAGAA
CAAAGTCAAGAAGTGTGTTTCCAAGTTAACATTGGTACTATACTAAGTGG
TAGGTTTGCATCTGCTTCTTGTTTACATTATAAAGCACATTCAGCCTGGG
TACGCCAAATCATGTTTATACCATTGCTAGATTGTTTTCTCACATGCTCA
ACAACTTCAAACGATTCAATCGTTCTTGCTTGGCTTGGTAAATCACGCAA
GGATGTTCGATTGACTGAATTTAAAATCCCACTTGGTATAAATGGTTTCG
ATTATCAAGAAAGTATGAACCTAATCGCCTCAGCTGGTATCAATAATCAT
GTTTGTTTATGGAATCCATATGTTGTTTCCAAACCGATTGGGATACTCCG
TGGTCACATGCAAGTGATTGTCGCTGTTCAGTTCATTCATAATAAATATC
AACTGGTCAGTTTATCTAAAGATAAAGTTCTGAGAATATGGGATGTCAAT
TTGCAAATTTGCATTCAACGTCTAACTGGAATCTTTCCAAAAGGTAATTT
CTACTTTTTTTATGTAAATCTAAATTCTCTAATTCTACTGCTTTGCCAGT
TACGTAACTTCTGACATTATGGAATCATACGCTTGATATGCACAAGGGAT
CGCCGCTACACATTTGTCGAACGTTTGCTTCAATATTTACGAAAATAATT
TAAATAATAACGAAAAACTGTTACAATATTGTCTAAAAGGTTATGAAGGT
TTTCTTAAACAAAGTATAATGTTTAAAATGTTTGGTAATGATTTGAATCG
GGCCAGGACTAGTTTGCTTGAAAATATTCGTTTTTTTTTTGTTTTTTTTT
GAAGATGAATGATTTTATATTTGGGTATTCAATAAAGCCAAACTTTGATC
GGAATATAGGGCTGTGAATGACTTTTCTTGTTCTTAATCTTAATATAATT
AAAGTGCTTATCCCATTGAAAAACTAGTAAGTAATCTTGCCTTTCCAGTT
CGTTCTAAAGCAATCTTCCTGTATTTTCCTGGAAAGGTCCTGACGTTAAT
ATTCTCATGCACTATGACCAAGAAGCTTCAGCACTATTCAGTACGTTCAA
TTACCATTTCCAAGTGTTGAAAATGAAACGCGAAGTGAAACATCGTGTGG
TTAGTCACGATTCGTCTGTCACAGAAGCTATTTACAATGAGAAATATGGT
CACGTGATTAGCGTGGACGAATCATCTTGCATCACTATTTGGTTTCTGAA
TACTGGTCAAAAGGTATTTAGAATATTCTTGTTTTTTATTGTTAAAATAT
ACTAGTCAGGTTGCTGAACGACTTTTTTAGAAATCTTTGTGTGAGGAATC
TAAAACATTTTGGAACTTGTTATAAACACCTAAAGATTCACAAAAAAGTT
TTACTGGCCATTTCCTATCCACCTCCTTTCACTCGTTTCAAGGTCTTTTT
TAAGATTTTGTGACGTCATCAGGGTGGTCAAACTAAGGTGAAATTTGAAC
CTCCACAAATATGGCCATGTTATACATTGTTGGATTGGAAATTTGATGTA
GATTTGAAAAAAGGTTTATCTCATAGGGTAAAAATCAAGTGAAAAAGAGT
TATTAATGCAGAAAGTGAGCAAATGACGTCATAGTTAATTTTTTTTTAAA
CATCACCATAACAATCGACTATATATACATTGCACTTTCGCTTATTCCAA
CTTNCTTACAACATCACCATAACAATCGACTATATATACATTGCACTCTC
GCTTATTCCAACTTCCATTATTCGAATCCTTAACTAAAAAGTCTGTCCAG
ATATAATTGGCAGTGGAAACAAGAATACCTGTAACTTTTGATAGTCATAA
ATATAATTATGGAAATCTTTTTTGTTTGTTTTAGAGAATCAAAAGCGCTA
TATTTGAATGTATTTTTGGTTGAAAAATTTGCGATTTTTAGCGGTTAAAT
TTGCGATTGTAAAAATTGAGCTTTTTTGCTACTTATGCTATAACGTTCAT
TTTTACACCAGTGGTAGTTCAACCTTAGGTTAAGAAGTTTGTTAAGTTTC
AAGGCGAACAGAAAAGTCCTTCGGAAGATATGAGACCCGAAATACCCCTT
GGTAGCACTTTTCTGTGAAATATCAAATCTCCAACTTATTACTAAAAACG
GGGGTAGTGATTATGATAAAACAGTTTTTCGATCATAACACATTTTACGA
TCTCTTTAATGACCTCATAGCCAAACTGTGATTAATGTTTTGTGAATTAG
CAAAGTTCTTTTAATGACTTAAAAATAACAAAGGCAATATTTCACTTCGT
TTCGAAATAATCAATGATACCAATAATACCAATGCACAACACTTAAAACA
CTTTCCAACTTTTAATTGCACTGTTCAAAAAAGATAACATAACCCCCGTT
TTTAGTAATAAGTTGGAGATTTGATATTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACTACCA
CTGGTGTAAAAATGAACGTTATAGCATAAGTAGAAAAAAAGCTCAATTTT
TACAATCGCAAATTTAACCGCTAAAAATCGCAAATTTTTCAAACAAAAAA
AATTTCCATAATTATATTTGACTATCAAAAGTTACAAGCATTTTTGTTTC
CACTGCCAATTATATCTGGACAGACTTTTTAATTCTCAGTCCCTGTCATA
AAGAAAACCTCGTAAAATACTTTATATGATACGAATCTTTCTGTAATTCG
AGAAAATTCAAGTTCCCATTCGAGCTCGAATTAGCGAGAGTCGATGGCTC
ACCACTAAGGTTTTTTAACACTGTTGGATCTACGAAGCCACCGCCTAATT
TTGGTGATTTCGAAATCCAGGTCAAATGATAATGATAATCTCCTAGTTTT
TAGTAAATTTTACAATGGTTCTCATAACATAGCCAAAAGAAATTATCACC
AAAATAAAACCACTTTTAAGCACTCGATAATACTAAAACTTTGATGATTG
ATATTCTTTTAAACATTTCACTCGAATTTGGAAACATTTTATTAAAACCT
ACCAAGTCACTTCATCTTGGTAGGAACAATACAAGGGACTGGGACCACAA
AATACGTACAAGGTTCCGTCCTTGAAAATTTTGCCCACATTCTCCATAGT
TTCTGTCCTCATTTCTCTAAAGGTCAAACAAATCAGCGAAGCGCATGGTG
AAGCAGAACTAACCACCGTCTGTCTCGACCACACACAAACTAGAATCTTG
ACCGCAGGAACGGATGGAGTTATCAAAATCTGGGACATCAACGGTAATTG
TCATCACATCTTAGTTGTTGAGAAAGGAAACCCATGTGAAATTACACAGA
TCGTGTATTTAAAACGTATGATCTTAGCTATCGGTTGGAGTCGTATTCTA
TGTTATTTTCCTTCAACACAACTGAAGACTTATTATGTCTATCCGGCTGA
TTGGAAAGGTAAACAGGAGCATTTTGACGATATCTTATCGGCTGATTTCT
CAGAGCCTCGTACCTTAGTAACTGCCAGTTACGATGGAGATATTGTATTT
TGGAATACAAACACGCAGAACTCGATTCGAAAAATCACTAACGAAAATAA
ATCAAGACTGGGGAATCGATTACCGCCTTTATCGCCTCGTAAAAGTCGTC
AGGAGAGACGCAACGAGTCTAGCATGTCTACAAAAAGTAACAAATTGTTA
ACACCTCACTCTCCGCTGAGATCCGCATGCCTCGATGAAAACACAGCATC
CTCAATCACTGTAACTTCGATCGCTTATCTGAAAAAAAGAAACACCAACA
GCCCAAGAACTGCAGATCTTTACTCTTGTCATTCAGATGGCCGTGTCAGA
TTCTGGAATAGTCTAACGTGTGAAAATCTTGGATCGTTTGCGGTCTACGA
GCAGTTTGGATCTTTAGTCTCGTGTATAAACTCAACAAACGAACTTTTAT
GCGTCGGTGGTGAAAACGGAACATGCAAAATATTCTTCATCGATGATTTT
CTGAACGACAAAAAACATGACGTCACCATACCTCTACATTCCGACGCAAA
CGAACATGAACCACCACAACTATTGGCCATGTTTTCAACCCACACTGATG
TCATCACCTCAGTTAAATTCATCGAACGAAACGGTAAAATTCTTCTTTTA
TCGTCGTCTACAGATTGTTCAGTGGCCATTCATTCTCTTGATTTCTTGAT
CGGTATATTTGGTCAAAAGGATCACTGGAATGTGAATGATGTACCAGGGA
TTTCTGTCAATGATNCTTTGGTCAAAAGGAGCACTGGAATGTGAATGATG
TACCAGGGATTTTGGTCAATGATTGGATCACCAAAAGACAGAACGATATC
AACAGACGGACGAGCATTCAACATGATTTCGATTGTGACGCTGACAACGA
AGAAGAACTTGAATGTAACCCTTTTTCCTTGTCATGTTTTTCTTTATAGG
TGCTGCCTGATTTTTTTGATTTTTTGTCATTATCATAAAGAATGATACCG
AAGATTTCTTAAATCTTGCTAGAAAGCTTCATTATCTATACTGCCTTGTC
GGGCCGCATTATATCGGCCCTAATTGTAGTTTTTTTTTTGCCTATGGCTT
TTGGTAGAATGAAGGCCACCTTAAGAAGGGAAAAAGGAGCCAATGTTTTA
AGGGGGTTAAAATGTGCTCCTAAAGAAAGACTTTATACTTTGACGTGGTT
ACTAAGGTACATCCTGGTTATACAGAAATATAAATAAACATGGTTGATTT
ACTTTCTTGTTTATTTTTCTAGCACTCGAAAAAGAATCTGAAATCGTAAT
TGAAGTACCGAGCAACAACAAAACAAATGCTACAAAGGACGAAAAACCAT
ACAGTAACACTACTACAACTGAGTTTTGGAATCAGCCTGAAATCCAACAA
GTAGTCGATGAAATCAACAAATCAAAGCTGGATTCAAATCAAAACAACAA
TCGAACCAATCGTCTTCCAATTGATGGCAAACGGAATTGCTCATATAGTT
CTTTGGCAACCAAACAAATGGCCAACATTAAGGAACTTGAAAAACCAGAA
TTCGTTTTACACCCTGAACGTTATTTTCTTGAAAAAGACGATAAGAATAC
TTTGGATATATTTTCAGATGCTCCAAAGGAATACACTCACGATGTCAAGT
TAAAACATGATGAGAAAAGTATTTTCCCGAAATATATTTTAGATATGGAT
ATGAAAATGAGAACTGCTCATAAATTAATGGTCACCAAACAACCGACCAA
ATTGAGTTTACACCGTGGTGGTAAAAATATGTCAAGACGTTCAACTTTGT
TGAGTACTCAAAGGAACAATACCTCAGATAATGGTTTCGGTGATTGAGTG
TTGTTGAACCAAATTATTGAGATTACCCCCTGGATACCCGGAGGGGCTAC
TTAGGCAAATGGAGGGTATGGTATGTGCCGTCCTTAAGGGTACCTTTTTT
GGATTTCCAAAGTCCCGCTAAGGGTCGGAAAAACCAGAAAATCAAATTTT
AGTCCCGCTAAGGGTCGGAGAAATAGGAAAATTTTACTTTTCACTTCTGA
AAGATCGAAATTTGGTCAAAATTGTCCCAGTAAGGGTCGTAAAATTTACA
AAATTTTCCTGTTATCTCCTTTTTAGTCCCGGTAAGGGTCCAAGGGTCGA
AAGTTGGGCGGTACCCCCC Coding sequence (CDS) from alignment at sc0000021:291812..298330- >TCONS_00002672 ID=TCONS_00002672|Name=TCONS_00002672|organism=Clytia hemisphaerica|type=CDS|length=7866bp|location=Sequence derived from alignment at sc0000021:291812..298330- (Clytia hemisphaerica) GTCAAACAAATCAGCGAAGCGCATGGTGAAGCAGAACTAACCACCGTCTG TCTCGACCACACACAAACTAGAATCTTGACCGCAGGAACGGATGGAGTTA TCAAAATCTGGGACATCAACGGTAATTGTCATCACATCTTAGTTGTTGAG AAAGGAAACCCATGTGAAATTACACAGATCGTGTATTTAAAACGTATGAT CTTAGCTATCGGTTGGAGTCGTATTCTATGTTATTTTCCTTCAACACAAC TGAAGACTTATTATGTCTATCCGGCTGATTGGAAAGGTAAACAGGAGCAT TTTGACGATATCTTATCGGCTGATTTCTCAGAGCCTCGTACCTTAGTAAC TGCCAGTTACGATGGAGATATTGTATTTTGGAATACAAACACGCAGAACT CGATTCGAAAAATCACTAACGAAAATAAATCAAGACTGGGGAATCGATTA CCGCCTTTATCGCCTCGTAAAAGTCGTCAGGAGAGACGCAACGAGTCTAG CATGTCTACAAAAAGTAACAAATTGTTAACACCTCACTCTCCGCTGAGAT CCGCATGCCTCGATGAAAACACAGCATCCTCAATCACTGTAACTTCGATC GCTTATCTGAAAAAAAGAAACACCAACAGCCCAAGAACTGCAGATCTTTA CTCTTGTCATTCAGATGGCCGTGTCAGATTCTGGAATAGTCTAACGTGTG AAAATCTTGGATCGTTTGCGGTCTACGAGCAGTTTGGATCTTTAGTCTCG TGTATAAACTCAACAAACGAACTTTTATGCGTCGGTGGTGAAAACGGAAC ATGCAAAATATTCTTCATCGATGATTTTCTGAACGACAAAAAACATGACG TCACCATACCTCTACATTCCGACGCAAACGAACATGAACCACCACAACTA TTGGCCATGTTTTCAACCCACACTGATGTCATCACCTCAGTTAAATTCAT CGAACGAAACGGTAAAATTCTTCTTTTATCGTCGTCTACAGATTGTTCAG TGGCCATTCATTCTCTTGATTTCTTGATCGGTATATTTGGTCAAAAGGAT CACTGGAATGTGAATGATGTACCAGGGATTTCTGTCAATGATNCTTTGGT CAAAAGGAGCACTGGAATGTGAGTCCTGACGTTAATATTCTCATGCACTA TGACCAAGAAGCTTCAGCACTATTCAGTACGTTCAATTACCATTTCCAAG TGTTGAAAATGAAACGCGAAGTGAAACATCGTGTGGTTAGTCACGATTCG TCTGTCACAGAAGCTATTTACAATGAGAAATATGGTCACGTGATTAGCGT GGACGAATCATCTTGCATCACTATTTGGTTTCTGAATACTGGTCAAAAGA TGTCTTCAACTAATTCTCTATCAAGCGTATCCACTCAAACTTTCCTCACT TCACTGGATTCAACGGATCTGAAAGCCATAGAAGACACTTTTCATTCCTT TAGTGGGAAAAATTTGGTTAACAAGTCAGAATTTGGTGTTATGTTATCAC AGGCGTTAAATAAAGGAACTTTAGTGGATTACTACCAATTATTTGATATG GTTGATATTTCACGCGAGGGCTTAATCAACTGGGATCGATTCTCGAATTA TTTGTTATTAGAATATTATGAACGTGAAGATCGAATCAAAACAACACAAG TTCCACAATGGCAAGACATTAGAAGTATACCGACCTCACATAAGAATTCC ATATGTTGTATTTTACAGAACACGAATAACGGCTTTCGTTATTGCACAGT TAGTAAGGATGGTCTAGTCAGTGTTTTTACCGATCGCCATGAAGTGAAAC GCACCTGTCAAATACATACAAACCCTGAAGAAATTCGAAGTAAAGACTTA TGGGTCACTGATGCCACACTTATGCCAAACATAAACAAAATAGCTTTTGC AACAACCAGCCGTGAAATTTGGATTTATGATATGTCTTTAAACAATGAAT TTGTTTGCCAGTATAAAATCACTGGTTTGAAGTTTATACCTCTCTGTATC AACTATTGGAGCAATAAAAACAATAATAATAGTGCTTTGTTAACGTTTGG TGATACAGGTGGTTTTATACATGCTATATTTTTCAACTCAACAACGTCTA CATTATTTGATAAACCGTGGAAATCAGAACAAAGTCAAGAAGTGTGTTTC CAAGTTAACATTGGTACTATACTAAGTGGTAGGTTTGCATCTGCTTCTTG TTTACATTATAAAGCACATTCAGCCTGGGTACGCCAAATCATGTTTATAC CATTGCTAGATTGTTTTCTCACATGCTCAACAACTTCAAACGATTCAATC GTTCTTGCTTGGCTTGGTAAATCACGCAAGGATGTTCGATTGACTGAATT TAAAATCCCACTTGGTATAAATGGTTTCGATTATCAAGAAAGTATGAACC TAATCGCCTCAGCTGGTATCAATAATCATGTTTGTTTATGGAATCCATAT GTTGTTTCCAAACCGATTGGGATACTCCGTGGTCACATGCAAGTGATTGT CGCTGTTCAGTTCATTCATAATAAATATCAACTGGTCAGTTTATCTAAAG ATAAAGTTCTGAGAATATGGGATGTCAATTTGCAAATTTGCATTCAACGT CTAACTGGAATCTTTCCAAAAGGTCAAACAAATCAGCGAAGCGCATGGTG AAGCAGAACTAACCACCGTCTGTCTCGACCACACACAAACTAGAATCTTG ACCGCAGGAACGGATGGAGTTATCAAAATCTGGGACATCAACGGTAATTG TCATCACATCTTAGTTGTTGAGAAAGGAAACCCATGTGAAATTACACAGA TCGTGTATTTAAAACGTATGATCTTAGCTATCGGTTGGAGTCGTATTCTA TGTTATTTTCCTTCAACACAACTGAAGACTTATTATGTCTATCCGGCTGA TTGGAAAGGTAAACAGGAGCATTTTGACGATATCTTATCGGCTGATTTCT CAGAGCCTCGTACCTTAGTAACTGCCAGTTACGATGGAGATATTGTATTT TGGAATACAAACACGCAGAACTCGATTCGAAAAATCACTAACGAAAATAA ATCAAGACTGGGGAATCGATTACCGCCTTTATCGCCTCGTAAAAGTCGTC AGGAGAGACGCAACGAGTCTAGCATGTCTACAAAAAGTAACAAATTGTTA ACACCTCACTCTCCGCTGAGATCCGCATGCCTCGATGAAAACACAGCATC CTCAATCACTGTAACTTCGATCGCTTATCTGAAAAAAAGAAACACCAACA GCCCAAGAACTGCAGATCTTTACTCTTGTCATTCAGATGGCCGTGTCAGA TTCTGGAATAGTCTAACGTGTGAAAATCTTGGATCGTTTGCGGTCTACGA GCAGTTTGGATCTTTAGTCTCGTGTATAAACTCAACAAACGAACTTTTAT GCGTCGGTGGTGAAAACGGAACATGCAAAATATTCTTCATCGATGATTTT CTGAACGACAAAAAACATGACGTCACCATACCTCTACATTCCGACGCAAA CGAACATGAACCACCACAACTATTGGCCATGTTTTCAACCCACACTGATG TCATCACCTCAGTTAAATTCATCGAACGAAACGGTAAAATTCTTCTTTTA TCGTCGTCTACAGATTGTTCAGTGGCCATTCATTCTCTTGATTTCTTGAT CGGTATATTTGGTCAAAAGGATCACTGGAATGTGAATGATGTACCAGGGA TTTCTGTCAATGATNCTTTGGTCAAAAGGAGCACTGGAATGTGAGTCCTG ACGTTAATATTCTCATGCACTATGACCAAGAAGCTTCAGCACTATTCAGT ACGTTCAATTACCATTTCCAAGTGTTGAAAATGAAACGCGAAGTGAAACA TCGTGTGGTTAGTCACGATTCGTCTGTCACAGAAGCTATTTACAATGAGA AATATGGTCACGTGATTAGCGTGGACGAATCATCTTGCATCACTATTTGG TTTCTGAATACTGGTCAAAAGATGTCTTCAACTAATTCTCTATCAAGCGT ATCCACTCAAACTTTCCTCACTTCACTGGATTCAACGGATCTGAAAGCCA TAGAAGACACTTTTCATTCCTTTAGTGGGAAAAATTTGGTTAACAAGTCA GAATTTGGTGTTATGTTATCACAGGCGTTAAATAAAGGAACTTTAGTGGA TTACTACCAATTATTTGATATGGTTGATATTTCACGCGAGGGCTTAATCA ACTGGGATCGATTCTCGAATTATTTGTTATTAGAATATTATGAACGTGAA GATCGAATCAAAACAACACAAGTTCCACAATGGCAAGACATTAGAAGTAT ACCGACCTCACATAAGAATTCCATATGTTGTATTTTACAGAACACGAATA ACGGCTTTCGTTATTGCACAGTTAGTAAGGATGGTCTAGTCAGTGTTTTT ACCGATCGCCATGAAGTGAAACGCACCTGTCAAATACATACAAACCCTGA AGAAATTCGAAGTAAAGACTTATGGGTCACTGATGCCACACTTATGCCAA ACATAAACAAAATAGCTTTTGCAACAACCAGCCGTGAAATTTGGATTTAT GATATGTCTTTAAACAATGAATTTGTTTGCCAGTATAAAATCACTGGTTT GAAGTTTATACCTCTCTGTATCAACTATTGGAGCAATAAAAACAATAATA ATAGTGCTTTGTTAACGTTTGGTGATACAGGTGGTTTTATACATGCTATA TTTTTCAACTCAACAACGTCTACATTATTTGATAAACCGTGGAAATCAGA ACAAAGTCAAGAAGTGTGTTTCCAAGTTAACATTGGTACTATACTAAGTG GTAGGTTTGCATCTGCTTCTTGTTTACATTATAAAGCACATTCAGCCTGG GTACGCCAAATCATGTTTATACCATTGCTAGATTGTTTTCTCACATGCTC AACAACTTCAAACGATTCAATCGTTCTTGCTTGGCTTGGTAAATCACGCA AGGATGTTCGATTGACTGAATTTAAAATCCCACTTGGTATAAATGGTTTC GATTATCAAGAAAGTATGAACCTAATCGCCTCAGCTGGTATCAATAATCA TGTTTGTTTATGGAATCCATATGTTGTTTCCAAACCGATTGGGATACTCC GTGGTCACATGCAAGTGATTGTCGCTGTTCAGTTCATTCATAATAAATAT CAACTGGTCAGTTTATCTAAAGATAAAGTTCTGAGAATATGGGATGTCAA TTTGCAAATTTGCATTCAACGTCTAACTGGAATCTTTCCAAAAGGTCAAA CAAATCAGCGAAGCGCATGGTGAAGCAGAACTAACCACCGTCTGTCTCGA CCACACACAAACTAGAATCTTGACCGCAGGAACGGATGGAGTTATCAAAA TCTGGGACATCAACGGTAATTGTCATCACATCTTAGTTGTTGAGAAAGGA AACCCATGTGAAATTACACAGATCGTGTATTTAAAACGTATGATCTTAGC TATCGGTTGGAGTCGTATTCTATGTTATTTTCCTTCAACACAACTGAAGA CTTATTATGTCTATCCGGCTGATTGGAAAGGTAAACAGGAGCATTTTGAC GATATCTTATCGGCTGATTTCTCAGAGCCTCGTACCTTAGTAACTGCCAG TTACGATGGAGATATTGTATTTTGGAATACAAACACGCAGAACTCGATTC GAAAAATCACTAACGAAAATAAATCAAGACTGGGGAATCGATTACCGCCT TTATCGCCTCGTAAAAGTCGTCAGGAGAGACGCAACGAGTCTAGCATGTC TACAAAAAGTAACAAATTGTTAACACCTCACTCTCCGCTGAGATCCGCAT GCCTCGATGAAAACACAGCATCCTCAATCACTGTAACTTCGATCGCTTAT CTGAAAAAAAGAAACACCAACAGCCCAAGAACTGCAGATCTTTACTCTTG TCATTCAGATGGCCGTGTCAGATTCTGGAATAGTCTAACGTGTGAAAATC TTGGATCGTTTGCGGTCTACGAGCAGTTTGGATCTTTAGTCTCGTGTATA AACTCAACAAACGAACTTTTATGCGTCGGTGGTGAAAACGGAACATGCAA AATATTCTTCATCGATGATTTTCTGAACGACAAAAAACATGACGTCACCA TACCTCTACATTCCGACGCAAACGAACATGAACCACCACAACTATTGGCC ATGTTTTCAACCCACACTGATGTCATCACCTCAGTTAAATTCATCGAACG AAACGGTAAAATTCTTCTTTTATCGTCGTCTACAGATTGTTCAGTGGCCA TTCATTCTCTTGATTTCTTGATCGGTATATTTGGTCAAAAGGATCACTGG AATGTGAATGATGTACCAGGGATTTCTGTCAATGATNCTTTGGTCAAAAG GAGCACTGGAATGTGAGTCCTGACGTTAATATTCTCATGCACTATGACCA AGAAGCTTCAGCACTATTCAGTACGTTCAATTACCATTTCCAAGTGTTGA AAATGAAACGCGAAGTGAAACATCGTGTGGTTAGTCACGATTCGTCTGTC ACAGAAGCTATTTACAATGAGAAATATGGTCACGTGATTAGCGTGGACGA ATCATCTTGCATCACTATTTGGTTTCTGAATACTGGTCAAAAGATGTCTT CAACTAATTCTCTATCAAGCGTATCCACTCAAACTTTCCTCACTTCACTG GATTCAACGGATCTGAAAGCCATAGAAGACACTTTTCATTCCTTTAGTGG GAAAAATTTGGTTAACAAGTCAGAATTTGGTGTTATGTTATCACAGGCGT TAAATAAAGGAACTTTAGTGGATTACTACCAATTATTTGATATGGTTGAT ATTTCACGCGAGGGCTTAATCAACTGGGATCGATTCTCGAATTATTTGTT ATTAGAATATTATGAACGTGAAGATCGAATCAAAACAACACAAGTTCCAC AATGGCAAGACATTAGAAGTATACCGACCTCACATAAGAATTCCATATGT TGTATTTTACAGAACACGAATAACGGCTTTCGTTATTGCACAGTTAGTAA GGATGGTCTAGTCAGTGTTTTTACCGATCGCCATGAAGTGAAACGCACCT GTCAAATACATACAAACCCTGAAGAAATTCGAAGTAAAGACTTATGGGTC ACTGATGCCACACTTATGCCAAACATAAACAAAATAGCTTTTGCAACAAC CAGCCGTGAAATTTGGATTTATGATATGTCTTTAAACAATGAATTTGTTT GCCAGTATAAAATCACTGGTTTGAAGTTTATACCTCTCTGTATCAACTAT TGGAGCAATAAAAACAATAATAATAGTGCTTTGTTAACGTTTGGTGATAC AGGTGGTTTTATACATGCTATATTTTTCAACTCAACAACGTCTACATTAT TTGATAAACCGTGGAAATCAGAACAAAGTCAAGAAGTGTGTTTCCAAGTT AACATTGGTACTATACTAAGTGGTAGGTTTGCATCTGCTTCTTGTTTACA TTATAAAGCACATTCAGCCTGGGTACGCCAAATCATGTTTATACCATTGC TAGATTGTTTTCTCACATGCTCAACAACTTCAAACGATTCAATCGTTCTT GCTTGGCTTGGTAAATCACGCAAGGATGTTCGATTGACTGAATTTAAAAT CCCACTTGGTATAAATGGTTTCGATTATCAAGAAAGTATGAACCTAATCG CCTCAGCTGGTATCAATAATCATGTTTGTTTATGGAATCCATATGTTGTT TCCAAACCGATTGGGATACTCCGTGGTCACATGCAAGTGATTGTCGCTGT TCAGTTCATTCATAATAAATATCAACTGGTCAGTTTATCTAAAGATAAAG TTCTGAGAATATGGGATGTCAATTTGCAAATTTGCATTCAACGTCTAACT GGAATCTTTCCAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00002672-exon-sc0000021-1575043694:296988..298330 | TCONS_00002672-exon-sc0000021-1575043694:296988..298330 | Clytia hemisphaerica | exon |
TCONS_00002672-exon-sc0000021-1575043694:296268..296494 | TCONS_00002672-exon-sc0000021-1575043694:296268..296494 | Clytia hemisphaerica | exon |
TCONS_00002672-exon-sc0000021-1575043694:293067..294308 | TCONS_00002672-exon-sc0000021-1575043694:293067..294308 | Clytia hemisphaerica | exon |
TCONS_00002672-exon-sc0000021-1575043694:291812..292708 | TCONS_00002672-exon-sc0000021-1575043694:291812..292708 | Clytia hemisphaerica | exon |
TCONS_00002672-exon-sc0000021-1510915933:296988..298330 | TCONS_00002672-exon-sc0000021-1510915933:296988..298330 | Clytia hemisphaerica | exon |
TCONS_00002672-exon-sc0000021-1510915933:296268..296494 | TCONS_00002672-exon-sc0000021-1510915933:296268..296494 | Clytia hemisphaerica | exon |
TCONS_00002672-exon-sc0000021-1510915933:293067..294308 | TCONS_00002672-exon-sc0000021-1510915933:293067..294308 | Clytia hemisphaerica | exon |
TCONS_00002672-exon-sc0000021-1510915933:291812..292708 | TCONS_00002672-exon-sc0000021-1510915933:291812..292708 | Clytia hemisphaerica | exon |
TCONS_00002672-exon-sc0000021-1491911889:296988..298330 | TCONS_00002672-exon-sc0000021-1491911889:296988..298330 | Clytia hemisphaerica | exon |
TCONS_00002672-exon-sc0000021-1491911889:296268..296494 | TCONS_00002672-exon-sc0000021-1491911889:296268..296494 | Clytia hemisphaerica | exon |
TCONS_00002672-exon-sc0000021-1491911889:293067..294308 | TCONS_00002672-exon-sc0000021-1491911889:293067..294308 | Clytia hemisphaerica | exon |
TCONS_00002672-exon-sc0000021-1491911889:291812..292708 | TCONS_00002672-exon-sc0000021-1491911889:291812..292708 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000021 | supercontig | sc0000021:291812..298330 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00002672 vs. Swiss-Prot (Human)
Match: WDR49 (WD repeat-containing protein 49 OS=Homo sapiens GN=WDR49 PE=2 SV=1) HSP 1 Score: 410.994 bits (1055), Expect = 3.482e-127 Identity = 216/541 (39.93%), Postives = 311/541 (57.49%), Query Frame = 2
Query: 1025 LAWLGKSRKDVRLTEFKIPLGINGFDYQESMNLIASAGINNHVCLWNPYVVSKPIGILRGHMQVIVAVQFIHNKYQLVSLSKDKVLRIWDVNLQICIQRLTGIFPKGPDVNILMHYDQEASALFSTFNYHFQVLKMKREVKHRVVSHDSSVTEAIYNEKYGHVISVDESSCITIWFLNTGQKVKQISEAHGEAELTTVCLDHTQTRILTAGTDGVIKIWDINGNCHHILVVEKGNPCEITQIVYLKRMILAIGWSRILCYFPSTQLKTYYVYPADWKGKQEHFDDILSADFSEPRTLVTASYDGDIVFWNTNTQNSIRKITNENKSRLGNRLPPLSPRKSRQERRNESSMSTKSNKLLTPHSPLRSACLDENTASSITVTSIAYLKKR-NTNSPRTADLYSCHSDGRVRFWNSLTCENLGSFAVYEQFGSLVSCINSTNELLCVGGENGTCKIFFIDDF-LNDKKHDVTIPLHSDANEHEPPQLLAMFSTHTDVITSVKFIERNGKILLLSSSTDCSVAIHSL-DFLIGIFGQKDHWNVND 2638
+AW KS+K + +T F I GI+ FDY +NLIA+AGINN VCLWNPYVVSKP+G+L GH ++AVQF + QL S SKDKVLR+WD+ Q+ IQR+ FPK D L H+D+ LF +FN +L MK E RV SH+ +VT +YN VIS D S ++ W ++TGQK+KQ + HG AE++T+ LD +TR+LT TDG +KIWD NG CHH L V + +I+QI+ LK+ IL GW R + F +++ P +WKG +H DDIL A F P+TLVT SYDG+IV WN +T+N+ + + + L ++L P+K R++ S + HS + +T V + +LK R NT A+L SC G VRFW+ + L F + GS++ + N L G +G KI+ I+++ LN K+ +T + P L+ F H D I+S++ E G++L++SSS DCS+ + + + + IFGQ HW++ +
Sbjct: 1 MAWREKSKKRLNMTSFNIAQGIHAFDYHSRLNLIATAGINNKVCLWNPYVVSKPVGVLWGHSASVIAVQFFVERKQLFSFSKDKVLRLWDIQHQLSIQRIACSFPKSQDFRCLFHFDEAHGRLFISFNNQLALLAMKSEASKRVKSHEKAVTCVLYNSILKQVISSDTGSTVSFWMIDTGQKIKQFTGCHGNAEISTMALDANETRLLTGSTDGTVKIWDFNGYCHHTLNVGQDGAVDISQILILKKKILVTGWERAITVFRPQNFNQFFIQPEEWKGGIQHHDDILCAAFLPPQTLVTGSYDGEIVLWNNSTENAHHVLHPDYQRLLKSKL-DTKPQKLLSAGRSQPSHP------MADHSTTGVRNFEIDTEGKNAVMRLCFLKARKNTAVTGGANLVSCGGSGYVRFWDIYKKQLLAEFLAHSGVGSIIMSTDKMNRYLTTGDLDGWLKIWNIEEYCLNSSKNKIT----------KAPTLIRSFQPHEDRISSLEMCEPGGQLLIISSSADCSICVTGVCNAPVWIFGQAKHWHIEN 524
The following BLAST results are available for this feature:
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