|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002748 ID=TCONS_00002748|Name=TCONS_00002748|organism=Clytia hemisphaerica|type=transcript|length=718bp
GCTTTAAACGGATCTTACACAATCTCCAAACATGCCATCGAAGCTTTCTC
ATACTGCTTAATGGAAGAGGTCGTCCATGATGGAATCTCTGTGCACATAA
TTTGTCCAACTGGTCAAAAAACTAACATCGTCGTTCCTGAGATACAACGC
AAACAATGGGAGGATGATTTCAATAAACAAAATGATGATATCAAACAAAG
ATATGgcccaaatttgaccaaatttttgaacGACGCATTTGCTCGGCAAG
CTAAAGTACCCGAAGGAACTGCTCAAGTCGTATCGAAAGTCAATCACGCT
ATCATGTCATCTAACCCTCACATCAAATACGTCGTTGGACCTTTATCGTG
GACCTACCAAATTCTAGCATGTTTACCTGTCTCTTATTTTCAATCGGCTG
CACATTCTATTTTCCCTCAGCTTAAACCCGTGATCGATCGGTTTGGACAA
AGATAAATTCTACTACTAAATTCTATATTGAAGTATTCACAATACACGGC
TGAGAAGCTTTCAACCTCACTGAACTTCAATCTCAAATGCCATAttattt
aaatctttttttgtggATTTAGGGTACAGATTTATAAAACCCGAAAAGAT
AGAtatcgtgctttaagccattgcaggcaaaaaaatattggaaaaatatt
gttgctattttgtttttgcttttcgaaaacccgtgaagcttctgattggt
caagtgctgaaattctat Run BLAST on NCBI transcript from alignment at sc0000021:1068655..1069694- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002748 ID=TCONS_00002748|Name=TCONS_00002748|organism=Clytia hemisphaerica|type=transcript|length=1040bp|location=Sequence derived from alignment at sc0000021:1068655..1069694- (Clytia hemisphaerica)
GCTTTAAACGGATCTTACACAATCTCCAAACATGCCATCGAAGCTTTCTC
ATACTGCTTAATGGAAGAGGTCGTCCATGATGGAATCTCTGTGCACATAA
TTTGTCCAACTGGTCAAAAAACTAACATCGTCGTTCCTGAGATACAACGC
AAACAATGGGAGGATGATTTCAATAAACAAAATGATGATATCAAACAAAG
ATATGGCCCAAATTTGACCAAATGTAAGTTTTGTTTTTATTTTATCTCTG
AAAAGCAGGTATGAAAATTGTAAAGTAACATTGTGAAATATTTTGATCGA
TGTATATTTGCATGCCAAGAAGTGTAAGGCTTCAGTGTCATAAACCAGTG
ATTCGCGGCTCAAATCCCCACGGTTTTCATGTTCAGTTCTTAAATAGCCA
AGCAAGCTGGCTGTGGAATACGTCAAAACAATTGTCTGAAACAACTGTCT
AAAAGTCCTAGATCACTCTGGGCCATCCAAGTGAAATATCGACCCTATCT
TACCAATATCTTTAAATGAATGGAATCTTTATTTATTTTTTATAGTTTTG
AACGACGCATTTGCTCGGCAAGCTAAAGTACCCGAAGGAACTGCTCAAGT
CGTATCGAAAGTCAATCACGCTATCATGTCATCTAACCCTCACATCAAAT
ACGTCGTTGGACCTTTATCGTGGACCTACCAAATTCTAGCATGTTTACCT
GTCTCTTATTTTCAATCGGCTGCACATTCTATTTTCCCTCAGCTTAAACC
CGTGATCGATCGGTTTGGACAAAGATAAATTCTACTACTAAATTCTATAT
TGAAGTATTCACAATACACGGCTGAGAAGCTTTCAACCTCACTGAACTTC
AATCTCAAATGCCATATTATTTAAATCTTTTTTTGTGGATTTAGGGTACA
GATTTATAAAACCCGAAAAGATAGATATCGTGCTTTAAGCCATTGCAGGC
AAAAAAATATTGGAAAAATATTGTTGCTATTTTGTTTTTGCTTTTCGAAA
ACCCGTGAAGCTTCTGATTGGTCAAGTGCTGAAATTCTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002748-exon-sc0000021-1575043694:1069472..1069694 | TCONS_00002748-exon-sc0000021-1575043694:1069472..1069694 | Clytia hemisphaerica | exon |
| TCONS_00002748-exon-sc0000021-1575043694:1068655..1069149 | TCONS_00002748-exon-sc0000021-1575043694:1068655..1069149 | Clytia hemisphaerica | exon |
| TCONS_00002748-exon-sc0000021-1510915933:1069472..1069694 | TCONS_00002748-exon-sc0000021-1510915933:1069472..1069694 | Clytia hemisphaerica | exon |
| TCONS_00002748-exon-sc0000021-1510915933:1068655..1069149 | TCONS_00002748-exon-sc0000021-1510915933:1068655..1069149 | Clytia hemisphaerica | exon |
| TCONS_00002748-exon-sc0000021-1491911889:1069472..1069694 | TCONS_00002748-exon-sc0000021-1491911889:1069472..1069694 | Clytia hemisphaerica | exon |
| TCONS_00002748-exon-sc0000021-1491911889:1068655..1069149 | TCONS_00002748-exon-sc0000021-1491911889:1068655..1069149 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000021 | supercontig | sc0000021:1068655..1069694 - |
Blast
The following BLAST results are available for this feature:
|
