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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002869 ID=TCONS_00002869|Name=TCONS_00002869|organism=Clytia hemisphaerica|type=transcript|length=835bp
tttttggttaacATCTCTTATCAGAAGCATACGCATATTCTGAGTCTTTT
TGATTGACAGAATCCATATTTCCGTAATACGGTTCTTTAATATTCTGTCC
CTTTCCGTAATACAAGTTTCCGGTCTCTCGGTCATGACTTTGGTTGTTAA
TTGGTTTGATATCTTTCAGCTGGCTCATCCTGAGCATCTTTGGCGTATCA
TAGTCGGAGTTACCTGTATTTGTAATTTTCCCCGGAGGTTGATATCCAGT
ATTTAGATCGCTGACTGTTCCGTATAGATGTGGGTCTTCGGGCTCTGTTT
CTTCGTAGAGATTGTAGGTCGGAACTTGTGGAGATATCATGTTCTTGTTT
TGATATTGGGGAGTTAATGGTTTGTCAGTAGAAGCGTACAAATGTTCTGT
CTGTGGATGTTGAGATGATGGAATACTTGCATTACTAAATTGTGGAGATA
ATTGCTTATCCACAACTGCATATCCAGCCTGTTGGGTATCAGTTGTAGCA
CATAAATTCCCTGGTGAAGGAAATATGGTCTGATCAGTAACACCAGCATA
GAGATGACCCGAAACTTGACTTTGTGGAGGTAACCCAACGTTTAATTCAG
CTTCAGATTTTGGATTTAACAGGTTCGTAGCAGTGCTATACATGTTGTTT
TGACTTTCAAGAGTTGAGTTTGCACCGTGTAAAGTACCATACTCTACTCC
ATACATATCATTTTCGTTTTGTAGATAACCCGCCTgtgatatttcatttt
cagtgtaTAGACTGTTGACTTTCACATCCCCCATGCTGGACGCTTCGTAG
TATAAATTTTCTTTCCCTTTCAAAGTTGTGTCCTG Run BLAST on NCBI transcript from alignment at sc0000023:390251..391153- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002869 ID=TCONS_00002869|Name=TCONS_00002869|organism=Clytia hemisphaerica|type=transcript|length=903bp|location=Sequence derived from alignment at sc0000023:390251..391153- (Clytia hemisphaerica)
TTTTTGGTTAACATCTCTTATCAGAAGCATACGCATATTCTGAGTCTTTT
TGATTGACAGAATCCATATTTCCGTAATACGGTTCTTTAATATTCTGTCC
CTTTCCGTAATACAAGTTTCCGGTCTCTCGGTCATGACTTTGGTTGTTAA
TTGGTTTGATATCTTTCAGCTGGCTCATCCTGAGCATCTTTGGCGTATCA
TAGTCGGAGTTACCTGTATTTGTAATTTTCCCCGGAGGTTGATATCCAGT
ATTTAGATCGCTGACTGTTCCGTATAGATGTGGGTCTTCGGGCTCTGTTT
CTTCGTAGAGATTGTAGGTCGGAACTTGTGGAGATATCATGTTCTTGTTT
TGATATTGGGGAGTTAATGGTTTGTCAGTAGAAGCGTACAAATGTTCTGT
CTGTGGATGTTGAGATGATGGAATACTTGCATTACTAAATTGTGGAGATA
ATTGCTTATCCACAACTGCATATCCAGCCTGTTGGGTATCAGTTGTAGCA
CATAAATTCCCTGGTGAAGGAAATATGGTCTGATCAGTAACACCAGCATA
GAGATGACCCGAAACTTGACTTTGTGGAGGTAACCCAACGTTTAATTCAG
CTTCAGATTTTGGATTTAACAGGTTCGTAGCAGTGCTATACATGTTGTTT
NGCCAAAGTTTAATTCAGCTTCAGATTTTGGATTTAACAGGTTCGTAGCA
GTGCTATACATGTTGTTTTGACTTTCAAGAGTTGAGTTTGCACCGTGTAA
AGTACCATACTCTACTCCATACATATCATTTTCGTTTTGTAGATAACCCG
CCTGTGATATTTCATTTTCAGTGTATAGACTGTTGACTTTCACATCCCCC
ATGCTGGACGCTTCGTAGTATAAATTTTCTTTCCCTTTCAAAGTTGTGTC
CTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002869-exon-sc0000023-1575043694:390513..391153 | TCONS_00002869-exon-sc0000023-1575043694:390513..391153 | Clytia hemisphaerica | exon |
| TCONS_00002869-exon-sc0000023-1575043694:390251..390444 | TCONS_00002869-exon-sc0000023-1575043694:390251..390444 | Clytia hemisphaerica | exon |
| TCONS_00002869-exon-sc0000023-1510915933:390513..391153 | TCONS_00002869-exon-sc0000023-1510915933:390513..391153 | Clytia hemisphaerica | exon |
| TCONS_00002869-exon-sc0000023-1510915933:390251..390444 | TCONS_00002869-exon-sc0000023-1510915933:390251..390444 | Clytia hemisphaerica | exon |
| TCONS_00002869-exon-sc0000023-1491911889:390513..391153 | TCONS_00002869-exon-sc0000023-1491911889:390513..391153 | Clytia hemisphaerica | exon |
| TCONS_00002869-exon-sc0000023-1491911889:390251..390444 | TCONS_00002869-exon-sc0000023-1491911889:390251..390444 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023 | supercontig | sc0000023:390251..391153 - |
Blast
The following BLAST results are available for this feature:
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