TCONS_00003049 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003049
Unique NameTCONS_00003049
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length160

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003049 ID=TCONS_00003049|Name=TCONS_00003049|organism=Clytia hemisphaerica|type=transcript|length=160bp
tgaattgtttcatttttattcggTATCGAACGGAGCCGCCACGTGTGGAT
AGGGTGTTAACATCTTTGCAAAATCATAATTTAAGCAGAGCAAAATACAT
CTCATCTTAGTAAACTAGTCTggtaattaatcatgtcagagggcgggaac
ataaaaaGCG
Run BLAST on NCBI

transcript from alignment at sc0000024:565367..565526

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003049 ID=TCONS_00003049|Name=TCONS_00003049|organism=Clytia hemisphaerica|type=transcript|length=160bp|location=Sequence derived from alignment at sc0000024:565367..565526 (Clytia hemisphaerica)
CGCtttttatgttcccgccctctgacatgattaattaccAGACTAGTTTA
CTAAGATGAGATGTATTTTGCTCTGCTTAAATTATGATTTTGCAAAGATG
TTAACACCCTATCCACACGTGGCGGCTCCGTTCGATAccgaataaaaatg
aaacaattca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001680XLOC_001680Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003049-exon-sc0000024-1491911889:565367..565526TCONS_00003049-exon-sc0000024-1491911889:565367..565526Clytia hemisphaericaexon
TCONS_00003049-exon-sc0000024-1510915933:565367..565526TCONS_00003049-exon-sc0000024-1510915933:565367..565526Clytia hemisphaericaexon
TCONS_00003049-exon-sc0000024-1575043694:565367..565526TCONS_00003049-exon-sc0000024-1575043694:565367..565526Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000024supercontigsc0000024:565367..565526 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003049 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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