TCONS_00003117 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003117
Unique NameTCONS_00003117
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3661

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003117 ID=TCONS_00003117|Name=TCONS_00003117|organism=Clytia hemisphaerica|type=transcript|length=3661bp
cggaTAGAAAATAAACATTAGAAATGTGTACAACATTTGTTGTAACTTTT
GGTGTATCAGCCATTGAAGGTCTTGCTGGCGGAGTCATCCAAAATTACAA
GCTCAATGATCTTCAAGTCACGCCAAGACACGAGGGCAAAGATGGTGACT
CTCGACTTACGCCCCTTATTTTGCGATCAAGCACTGAAATACGAGAAAGG
GCGTTGGAAGATTTCAGTAGTGATGATTGTTTATTCGAAGAATTTAGCCC
TCCTTCGAAGAGGGATTTTAAATATAGAGACTCATTTTTAGAAAGACCAG
GGCAAGATTTGGATCCTTGCTCTGATTGGCTAGGCCCAAAAAGAGAACAT
CGATCTGCGAACTGCAGTAACGATATAGATGTCTCTGTAAAGAGCACATA
TAGCAAAGAGCCTCCCGAATTCGCGGGTCACAGGAATGAACATTCTCTTT
TGAACAGTAGAGACTCGTGTCTGGAAAGCTCTAATAACAACACATTTCGC
ACTCTTGAGGGGCAGAAAAACCGAAATAATGATGATTTAGAAGCTGACGA
AGAGAGACACAAAAGCAATGATTCTTATGGTGAAAAATTATCTGACGAAG
AAGATAAATCGCTTAATGTTGATTTTAGTTGGAGAAACTATCGTCCAAAA
GGCAAATTAAGATGGCTTGCCACCTGTTTTCTATATTCTTTTTATATGGT
TGTGCTGTGTAGTTTCTTGGTGGCTGCTATCTCTGTTGGGATCATGTTTG
TGGATATTAATACTGCAGATGCTTGTTATTTTACACCGTGGCACCGTGTA
CCGTTAAACGTGCAACGTGTTCGTGTATCCGTGCAAGTGGTTCAAGGATG
GATTTTACAATTCTTCCATATTGGAGTTTTGATTTTCGTTTTCGGTTTCA
AACTGGTCGATCAACTTCATTTGCTACATTTGAACGTGATAGCAGCATTC
ATTGATTCAGTGTATCGTCTCTTTTTCCAAGTATATGATGTATACGATTG
GCCTCAACGAATGTTCCCTCTCAACGCCATCTTTGTTTGTGTTATGATTG
CCAATAGTTACACGTTAGCTAAACATTTTACAAACCAGCGTGGTCGAAAA
TTAATCATCACCTTCCAGCTTGGTTCACAGTTCATGCTTGGAGCAGCTAC
ACTATTTTTAACTTTCTATCTGCTTGTTCCATGGTTTGTCAAACTGGGAC
CTTTTCAACAAGCACTCGTTGCCGGAGTGTCGCCTATTTTTGGTGCTATC
AATAAAGCAATAAGCCGGATCGTGATCCAGAACGTCTCCAATATCAACCA
TCCTGGGACGTCTTATATGTTGGTTATTGCAGTTTATGCTGGTGCAGCTC
TTGTTTACCGAGCCCTTCAAGCAGAACTAGAATCGTCCGCCCTGTttctt
tttctgtgttttgcGCATGCCTTGATTGGATTCTTAGAGCGTTTATCAGT
TGTCCTTCGAGATCATTTTTACTTTTGGTTTTATAAGAAAGTTCTAAAGA
AAGAGCGTGATTATAACTCCTTTGTTGGTTCGTTTCGCACGCCGCGTACG
CAAAGGTTAGTTGCCGATCTCACCATTTGTAATATCATTCACGAAACTAA
TGCTCTAATCTATACCAACGCGTTTGTTCAGTTTTACTCACTACAGATTG
GGATTGATGGTCAAGAAAATGCTGTAGATGTCTATGATgttgtttcgaaa
tttttcaTACGCAGcttttctgccattttgattgAATATGTTTTCACAGC
TTTTGGAATTTTCATTCTTACCTGGTACATGAATATTCCCGTCATTCGTG
TCTGGCGGAAGAAATGGAAATCTATATTGGCAGGTAATCTATTCGTATGC
GCATGCTTGGTTATTTATTCCACTCAATATTTGCTTGTGGTTGTGGCAGA
CCGTTATCAACATACGATCCAATCAAAAAACGAAACAATGTCATGTGACC
TGTCAAACATACCGTTCTTCAAGAAGTGAAAGTGTCTATGTAAAATAACC
AGGGTGGCTAGGATCGACAGATGACGCAATGCGGGACATACATTCCAAGT
TTGATGTTCCCGTTCGACGAACGTTTGACTTCCAGAGGCTCATGTTGCCT
TCAAATGCCAATGAGTTATATAGCAGTTGATGTTCATGTTGATTTCAAAA
ATGGACTAAAATGGCAAAAGCTTTTTCTGTATTAAAGTATGGCTGGTACC
AACAGTATTATAGGATATCTACCAACAGTATTATAGGATATCTATTGAAC
AGTAATCTCAGAATGATTCTTACACCATCGATTTTCCAAttaataccggg
tgcgccacaaaaaagtttctctctttaaaacctttttattcgaaatctaa
aagttttaaaaggaCCATGCCTATTCcattagaaagaagaaagataaact
caaattttgatgcgtcattttttcaattcgattcattagatcgaaagtta
tgctcaattgaataaaaaaacgaACGGttaaaatcgacctatcaaattaa
acaagcataattacatgatgtatcagtatttttgttCCAGTGGTCAATAA
TGATAATTAGCtatctaaatgaccttttggtatataaaggaaggttgaaa
tacattaaaaggaagaaaattcgtcgaaaaaagccaacaaatcttgtaaa
attcataaaaatacatcaaattggGGTTTCGAGGTAcgtccagccttaca
tagactttagtCAGTCTACAaacaaaaatctgaggaaaatattggtaaaa
gtaaattaaaaagattttgatgaagattttaaacccatcAGCTTCAAAAT
TCATGTGTTTACAACTACTTAAAAATGANttttgatgaagattttaaacc
ctttcgacccatCAGCTTCAAAATTCATGTGTTTAACTActtaaaaatgc
ttttaataatgtaaagcctattgcgattgctagttttaaaataaaaataa
tttaacgttttcgggcactttctgaaagtaacttttttaatcaagtgagc
atacttttgatataatgaatcgaattgaaaaaatgactcatcaaaattta
agtttatctttcttctttccaatggaataggcatgtttttttttaatctt
cagattacgagaaaatcagtttcaaagagagaaacttttttgtggcgcac
ctgGTAGAACACtaaagttgacgctctctaattcgattttcaaaggaaat
tgaatttctattcaataatAAGGGAGAATATCGAATGGTAGAgcgtcaaa
ttagagagcgtcaactgtacgtAGGCCAACGCGAATGCGTTTATTTGTAA
CTCCTGTAGATAATGGCCCCCTAGCAAAAGGTGTACCCGCTACTTATTTA
GGAATTCAGTCATGTACAAAATAAGGTCGTAAAATTAAATACTATTTTCA
TAACATTTTCGAAAGAATTTCTTTACAATATGCACGCAAACAATTTTTCC
GTTAATCTTTATGCcctttatgaatatttttttctctaaatttcaATATT
TAGCCGAGTGCTCTTACGtataaaattataataaaagtTTGTAATTTCTA
ACACATCACCAAGGGTGAACTTTAAAGTCTTTCAAGAACACTGAAAAGTA
CGGTTGATTATGTTCGTTCATTCCATGGTGAATTGGGTGGTAAACACGAG
CCGCCCCATCT
Run BLAST on NCBI

protein sequence of TCONS_00003117-protein

>TCONS_00003117-protein ID=TCONS_00003117-protein|Name=TCONS_00003117-protein|organism=Clytia hemisphaerica|type=polypeptide|length=651bp
MCTTFVVTFGVSAIEGLAGGVIQNYKLNDLQVTPRHEGKDGDSRLTPLIL
RSSTEIRERALEDFSSDDCLFEEFSPPSKRDFKYRDSFLERPGQDLDPCS
DWLGPKREHRSANCSNDIDVSVKSTYSKEPPEFAGHRNEHSLLNSRDSCL
ESSNNNTFRTLEGQKNRNNDDLEADEERHKSNDSYGEKLSDEEDKSLNVD
FSWRNYRPKGKLRWLATCFLYSFYMVVLCSFLVAAISVGIMFVDINTADA
CYFTPWHRVPLNVQRVRVSVQVVQGWILQFFHIGVLIFVFGFKLVDQLHL
LHLNVIAAFIDSVYRLFFQVYDVYDWPQRMFPLNAIFVCVMIANSYTLAK
HFTNQRGRKLIITFQLGSQFMLGAATLFLTFYLLVPWFVKLGPFQQALVA
GVSPIFGAINKAISRIVIQNVSNINHPGTSYMLVIAVYAGAALVYRALQA
ELESSALFLFLCFAHALIGFLERLSVVLRDHFYFWFYKKVLKKERDYNSF
VGSFRTPRTQRLVADLTICNIIHETNALIYTNAFVQFYSLQIGIDGQENA
VDVYDVVSKFFIRSFSAILIEYVFTAFGIFILTWYMNIPVIRVWRKKWKS
ILAGNLFVCACLVIYSTQYLLVVVADRYQHTIQSKNETMSCDLSNIPFFK
K
Run BLAST on NCBI

transcript from alignment at sc0000025:712254..717295+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003117 ID=TCONS_00003117|Name=TCONS_00003117|organism=Clytia hemisphaerica|type=transcript|length=5042bp|location=Sequence derived from alignment at sc0000025:712254..717295+ (Clytia hemisphaerica)
cggaTAGAAAATAAACATTAGAAATGTGTACAACATTTGTTGTAACTTTT GGTGTATCAGCCATTGAAGGTCTTGCTGGCGGAGTCATCCAAAATTACAA GCTCAATGATCTTCAAGTCACGCCAAGACACGAGGGCAAAGATGGTGACT CTCGACTTACGCCCCTTATTTTGCGATCAAGCACTGAAATACGAGAAAGG GCGTTGGAAGATTTCAGTAGTGATGATTGTTTATTCGAAGAATTTAGCCC TCCTTCGAAGAGGGATTTTAAATATAGAGACTCATTTTTAGAAAGACCAG GGCAAGATTTGGATCCTTGCTCTGATTGGCTAGGCCCAAAAAGAGAACAT CGATCTGCGAACTGCAGTAACGATATAGATGTCTCTGTAAAGAGCACATA TAGCAAAGAGCCTCCCGAATTCGCGGGTCACAGGAATGAACATTCTCTTT TGAACAGTAGAGACTCGTGTCTGGAAAGCTCTAATAACAACACATTTCGC ACTCTTGAGGGGCAGAAAAACCGAAATAATGATGATTTAGAAGCTGACGA AGAGAGACACAAAAGCAATGATTCTTATGGTGAAAAATTATCTGACGAAG AAGATAAATCGCTTAATGTTGATTTTAGTTGGAGAAACTATCGTCCAAAA GGCAAATTAAGATGGCTTGCCACCTGTTTTCTATATTCTTTTTATATGGT TGTGCTGTGTAGTTTCTTGGTGGCTGCTATCTCTGTTGGGATCATGTTTG TGGATATTAATACTGCAGATGCTTGTTATTTTACACCGTGGCACCGTGTA CCGTTAAACGTGCAACGTGTTCGTGTATCCGTGCAAGTGGTGAGTAATTC TGTTATTATTACTATTAGGCttgtttattttatcatttCTGCGTAGTATA ATTAATATAAAAAAGTAAGGTCTTTTTGTCTGGTTAAAAATCACGATTGG ttacgctttttcttttataagaataacttctataagaatatcagggtgag gtttcgggtttaaaacaataagcctattgtttagaacaaaagaaaattaa gaataatgctcaccctcaacaaaagtacactattcttataaaaaaaagcg tgtactttcAGGAGGTCTTAAAAGATGAGTGTTTCAGTAATTTACACTTT GACTTTAGGTTTCGTTTTTGGACATTATAATACTATGATTTTAGGACTGA GATTAGTTTTGTTATTTCAACCGTGTAAAAAAGCTACTTGTGTAGAGATG ACCTGACCACTCAAAGTAAGAGAACCCAGGGaagggggcactgaccttga cggccgatgtagacgtgccgctggagttcaAAAAGTTGAcactgtcagat atgaatttttggtaaaatggtgACCTTGTCAAAACGAAAAAATGAAGCTa acaagtggcaaaaatgactaaaagtagacgaaaaaatgaaacttaattTT TACCCTGAAAGATTGTTCAAATAAGCAAAAGTGGACCCTgccagatacac atcttgaaaattagtagatTTTGGACCCTgttagatatcttcagagccta aaaaggggccctgaccagcggcacgtcccttacccaatttttattcctaa ttacccccccccccccccNNNNNNNNNNNTAGGCGCATTCTGGAAGGGAA ATGAGtggctttactttttcttgcctgggaaaggttagagattctactct accccttcgggctttaaactcaatgaccTGACCACTCAAAGTAAGGGACC TACCGGATTGAAGATCTAAGAGCAGTTCAACGTTGATTAGTAAAGCTTTC TCTTTTTAAGGTTCAAGGATGGATTTTACAATTCTTCCATATTGGAGTTT TGATTTTCGTTTTCGGTTTCAAACTGGTCGATCAACTTCATTTGCTACAT TTGAACGTGGTATgtaataacttttttattcattgtTACCAGGTTTTGCA TGGAACTCATTTTATACCATTTTATATCTTGGAAAGTGTGACCCGTCACA CACTGATATGCGTATGTGAAAGTTGAATCCTAGTTGAGAACCCTACCTGA AACATCCCTTGGATCTGAAGAATCAGGTTCACCGAGTTATAGGATATATT TTAAAACTCTAGTATGGTACGGTCACCagagaaatatttctttgattttt atggtatgaaggattcaaaaaaagattctaTCTGAGCGTAGATTACATTA CAAACTTAATGTCAGTTTTTTGGGTGTGCAGAGAAAGCctcattaaaaac ttttttttgagtgAAGTTCTTAGTATGCCTCGAGTTTGAGTTtcatttct tttctcttttacaTTATAGATAGCAGCATTCATTGATTCAGTGTATCGTC TCTTTTTCCAAGTATATGATGTATACGATTGGCCTCAACGAATGTTCCCT CTCAACGCCATCTTTGTTTGTGTTATGATTGCCAATAGTTACACGTTAGC TAAACATTTTACAAACCAGCGTGGTCGAAAATTAATCATCACCTTCCAGC TTGGTTCACAGTTCATGCTTGGAGCAGCTACACTATTTTTAACTTTCTAT CTGCTTGTTCCATGGTTTGTCAAACTGGGACCTTTTCAACAAGCACTCGT TGCCGGAGTGTCGCCTATTTTTGGTGCTATCAATAAAGCAATAAGCCGGA TCGTGATCCAGAACGTCTCCAATATCAACCATCCTGGGACGTCTTATATG TTGGTTATTGCAGTTTATGCTGGTGCAGCTCTTGTTTACCGAGCCCTTCA AGCAGAACTAGAATCGTCCGCCCTGTttctttttctgtgttttgcGCATG CCTTGATTGGATTCTTAGAGCGTTTATCAGTTGTCCTTCGAGATCATTTT TACTTTTGGTTTTATAAGAAAGTTCTAAAGAAAGAGCGTGATTATAACTC CTTTGTTGGTTCGTTTCGCACGCCGCGTACGCAAAGGTTAGTTGCCGATC TCACCATTTGTAATATCATTCACGAAACTAATGCTCTAATCTATACCAAC GCGTTTGTTCAGTTTTACTCACTACAGATTGGGATTGATGGTCAAGAAAA TGCTGTAGATGTCTATGATgttgtttcgaaatttttcaTACGCAGctttt ctgccattttgattgAATATGTTTTCACAGCTTTTGGAATTTTCATTCTT ACCTGGTACATGAATATTCCCGTCATTCGTGTCTGGCGGAAGAAATGGAA ATCTATATTGGCAGGTAATCTATTCGTATGCGCATGCTTGGTTATTTATT CCACTCAATATTTGCTTGTGGTTGTGGCAGACCGTTATCAACATACGATC CAATCAAAAAACGAAACAATGTCATGTGACCTGTCAAACATACCGTTCTT CAAGAAGTGAAAGTGTCTATGTAAAATAACCAGGGTGGCTAGGATCGACA GATGACGCAATGCGGGACATACATTCCAAGTTTGATGTTCCCGTTCGACG AACGTTTGACTTCCAGAGGCTCATGTTGCCTTCAAATGCCAATGAGTTAT ATAGCAGTTGATGTTCATGTTGATTTCAAAAATGGACTAAAATGGCAAAA GCTTTTTCTGTATTAAAGTATGGCTGGTACCAACAGTATTATAGGATATC TACCAACAGTATTATAGGATATCTATTGAACAGTAATCTCAGAATGATTC TTACACCATCGATTTTCCAAttaataccgggtgcgccacaaaaaagtttc tctctttaaaacctttttattcgaaatctaaaagttttaaaaggaCCATG CCTATTCcattagaaagaagaaagataaactcaaattttgatgcgtcatt ttttcaattcgattcattagatcgaaagttatgctcaattgaataaaaaa acgaACGGttaaaatcgacctatcaaattaaacaagcataattacatgat gtatcagtatttttgttCCAGTGGTCAATAATGATAATTAGCtatctaaa tgaccttttggtatataaaggaaggttgaaatacattaaaaggaagaaaa ttcgtcgaaaaaagccaacaaatcttgtaaaattcataaaaatacatcaa attggGGTTTCGAGGTAcgtccagccttacatagactttagtCAGTCTAC Aaacaaaaatctgaggaaaatattggtaaaagtaaattaaaaagattttg atgaagattttaaacccatcAGCTTCAAAATTCATGTGTTTACAACTACT TAAAAATGANttttgatgaagattttaaaccctttcgacccatCAGCTTC AAAATTCATGTGTTTAACTActtaaaaatgcttttaataatgtaaagcct attgcgattgctagttttaaaataaaaataatttaacgttttcgggcact ttctgaaagtaacttttttaatcaagtgagcatacttttgatataatgaa tcgaattgaaaaaatgactcatcaaaatttaagtttatctttcttctttc caatggaataggcatgtttttttttaatcttcagattacgagaaaatcag tttcaaagagagaaacttttttgtggcgcacctgGTAGAACACtaaagtt gacgctctctaattcgattttcaaaggaaattgaatttctattcaataat AAGGGAGAATATCGAATGGTAGAgcgtcaaattagagagcgtcaactgta cgtAGGCCAACGCGAATGCGTTTATTTGTAACTCCTGTAGATAATGGCCC CCTAGCAAAAGGTGTACCCGCTACTTATTTAGGAATTCAGTCATGTACAA AATAAGGTCGTAAAATTAAATACTATTTTCATAACATTTTCGAAAGAATT TCTTTACAATATGCACGCAAACAATTTTTCCGTTAATCTTTATGCccttt atgaatatttttttctctaaatttcaATATTTAGCCGAGTGCTCTTACGt ataaaattataataaaagtTTGTAATTTCTAACACATCACCAAGGGTGAA CTTTAAAGTCTTTCAAGAACACTGAAAAGTACGGTTGATTATGTTCGTTC ATTCCATGGTGAATTGGGTGGTAAACACGAGCCGCCCCATCT

Coding sequence (CDS) from alignment at sc0000025:712254..717295+

>TCONS_00003117 ID=TCONS_00003117|Name=TCONS_00003117|organism=Clytia hemisphaerica|type=CDS|length=5868bp|location=Sequence derived from alignment at sc0000025:712254..717295+ (Clytia hemisphaerica)
ATGTGTACAACATTTGTTGTAACTTTTGGTGTATCAGCCATTGAAGGTCT
TGCTGGCGGAGTCATCCAAAATTACAAGCTCAATGATCTTCAAGTCACGC
CAAGACACGAGGGCAAAGATGGTGACTCTCGACTTACGCCCCTTATTTTG
CGATCAAGCACTGAAATACGAGAAAGGGCGTTGGAAGATTTCAGTAGTGA
TGATTGTTTATTCGAAGAATTTAGCCCTCCTTCGAAGAGGGATTTTAAAT
ATAGAGACTCATTTTTAGAAAGACCAGGGCAAGATTTGGATCCTTGCTCT
GATTGGCTAGGCCCAAAAAGAGAACATCGATCTGCGAACTGCAGTAACGA
TATAGATGTCTCTGTAAAGAGCACATATAGCAAAGAGCCTCCCGAATTCG
CGGGTCACAGGAATGAACATTCTCTTTTGAACAGTAGAGACTCGTGTCTG
GAAAGCTCTAATAACAACACATTTCGCACTCTTGAGGGGCAGAAAAACCG
AAATAATGATGATTTAGAAGCTGACGAAGAGAGACACAAAAGCAATGATT
CTTATGGTGAAAAATTATCTGACGAAGAAGATAAATCGCTTAATGTTGAT
TTTAGTTGGAGAAACTATCGTCCAAAAGGCAAATTAAGATGGCTTGCCAC
CTGTTTTCTATATTCTTTTTATATGGTTGTGCTGTGTAGTTTCTTGGTGG
CTGCTATCTCTGTTGGGATCATGTTTGTGGATATTAATACTGCAGATGCT
TGTTATTTTACACCGTGGCACCGTGTACCGTTAAACGTGCAACGTGTTCG
TGTATCCGTGCAAGTGGTTCAAGGATGGATTTTACAATTCTTCCATATTG
GAGTTTTGATTTTCGTTTTCGGTTTCAAACTGGTCGATCAACTTCATTTG
CTACATTTGAACGTGATAGCAGCATTCATTGATTCAGTGTATCGTCTCTT
TTTCCAAGTATATGATGTATACGATTGGCCTCAACGAATGTTCCCTCTCA
ACGCCATCTTTGTTTGTGTTATGATTGCCAATAGTTACACGTTAGCTAAA
CATTTTACAAACCAGCGTGGTCGAAAATTAATCATCACCTTCCAGCTTGG
TTCACAGTTCATGCTTGGAGCAGCTACACTATTTTTAACTTTCTATCTGC
TTGTTCCATGGTTTGTCAAACTGGGACCTTTTCAACAAGCACTCGTTGCC
GGAGTGTCGCCTATTTTTGGTGCTATCAATAAAGCAATAAGCCGGATCGT
GATCCAGAACGTCTCCAATATCAACCATCCTGGGACGTCTTATATGTTGG
TTATTGCAGTTTATGCTGGTGCAGCTCTTGTTTACCGAGCCCTTCAAGCA
GAACTAGAATCGTCCGCCCTGTttctttttctgtgttttgcGCATGCCTT
GATTGGATTCTTAGAGCGTTTATCAGTTGTCCTTCGAGATCATTTTTACT
TTTGGTTTTATAAGAAAGTTCTAAAGAAAGAGCGTGATTATAACTCCTTT
GTTGGTTCGTTTCGCACGCCGCGTACGCAAAGGTTAGTTGCCGATCTCAC
CATTTGTAATATCATTCACGAAACTAATGCTCTAATCTATACCAACGCGT
TTGTTCAGTTTTACTCACTACAGATTGGGATTGATGGTCAAGAAAATGCT
GTAGATGTCTATGATgttgtttcgaaatttttcaTACGCAGcttttctgc
cattttgattgAATATGTTTTCACAGCTTTTGGAATTTTCATTCTTACCT
GGTACATGAATATTCCCGTCATTCGTGTCTGGCGGAAGAAATGGAAATCT
ATATTGGCAGGTAATCTATTCGTATGCGCATGCTTGGTTATTTATTCCAC
TCAATATTTGCTTGTGGTTGTGGCAGACCGTTATCAACATACGATCCAAT
CAAAAAACGAAACAATGTCATGTGACCTGTCAAACATACCGTTCTTCAAG
AAGTGAATGTGTACAACATTTGTTGTAACTTTTGGTGTATCAGCCATTGA
AGGTCTTGCTGGCGGAGTCATCCAAAATTACAAGCTCAATGATCTTCAAG
TCACGCCAAGACACGAGGGCAAAGATGGTGACTCTCGACTTACGCCCCTT
ATTTTGCGATCAAGCACTGAAATACGAGAAAGGGCGTTGGAAGATTTCAG
TAGTGATGATTGTTTATTCGAAGAATTTAGCCCTCCTTCGAAGAGGGATT
TTAAATATAGAGACTCATTTTTAGAAAGACCAGGGCAAGATTTGGATCCT
TGCTCTGATTGGCTAGGCCCAAAAAGAGAACATCGATCTGCGAACTGCAG
TAACGATATAGATGTCTCTGTAAAGAGCACATATAGCAAAGAGCCTCCCG
AATTCGCGGGTCACAGGAATGAACATTCTCTTTTGAACAGTAGAGACTCG
TGTCTGGAAAGCTCTAATAACAACACATTTCGCACTCTTGAGGGGCAGAA
AAACCGAAATAATGATGATTTAGAAGCTGACGAAGAGAGACACAAAAGCA
ATGATTCTTATGGTGAAAAATTATCTGACGAAGAAGATAAATCGCTTAAT
GTTGATTTTAGTTGGAGAAACTATCGTCCAAAAGGCAAATTAAGATGGCT
TGCCACCTGTTTTCTATATTCTTTTTATATGGTTGTGCTGTGTAGTTTCT
TGGTGGCTGCTATCTCTGTTGGGATCATGTTTGTGGATATTAATACTGCA
GATGCTTGTTATTTTACACCGTGGCACCGTGTACCGTTAAACGTGCAACG
TGTTCGTGTATCCGTGCAAGTGGTTCAAGGATGGATTTTACAATTCTTCC
ATATTGGAGTTTTGATTTTCGTTTTCGGTTTCAAACTGGTCGATCAACTT
CATTTGCTACATTTGAACGTGATAGCAGCATTCATTGATTCAGTGTATCG
TCTCTTTTTCCAAGTATATGATGTATACGATTGGCCTCAACGAATGTTCC
CTCTCAACGCCATCTTTGTTTGTGTTATGATTGCCAATAGTTACACGTTA
GCTAAACATTTTACAAACCAGCGTGGTCGAAAATTAATCATCACCTTCCA
GCTTGGTTCACAGTTCATGCTTGGAGCAGCTACACTATTTTTAACTTTCT
ATCTGCTTGTTCCATGGTTTGTCAAACTGGGACCTTTTCAACAAGCACTC
GTTGCCGGAGTGTCGCCTATTTTTGGTGCTATCAATAAAGCAATAAGCCG
GATCGTGATCCAGAACGTCTCCAATATCAACCATCCTGGGACGTCTTATA
TGTTGGTTATTGCAGTTTATGCTGGTGCAGCTCTTGTTTACCGAGCCCTT
CAAGCAGAACTAGAATCGTCCGCCCTGTttctttttctgtgttttgcGCA
TGCCTTGATTGGATTCTTAGAGCGTTTATCAGTTGTCCTTCGAGATCATT
TTTACTTTTGGTTTTATAAGAAAGTTCTAAAGAAAGAGCGTGATTATAAC
TCCTTTGTTGGTTCGTTTCGCACGCCGCGTACGCAAAGGTTAGTTGCCGA
TCTCACCATTTGTAATATCATTCACGAAACTAATGCTCTAATCTATACCA
ACGCGTTTGTTCAGTTTTACTCACTACAGATTGGGATTGATGGTCAAGAA
AATGCTGTAGATGTCTATGATgttgtttcgaaatttttcaTACGCAGctt
ttctgccattttgattgAATATGTTTTCACAGCTTTTGGAATTTTCATTC
TTACCTGGTACATGAATATTCCCGTCATTCGTGTCTGGCGGAAGAAATGG
AAATCTATATTGGCAGGTAATCTATTCGTATGCGCATGCTTGGTTATTTA
TTCCACTCAATATTTGCTTGTGGTTGTGGCAGACCGTTATCAACATACGA
TCCAATCAAAAAACGAAACAATGTCATGTGACCTGTCAAACATACCGTTC
TTCAAGAAGTGAATGTGTACAACATTTGTTGTAACTTTTGGTGTATCAGC
CATTGAAGGTCTTGCTGGCGGAGTCATCCAAAATTACAAGCTCAATGATC
TTCAAGTCACGCCAAGACACGAGGGCAAAGATGGTGACTCTCGACTTACG
CCCCTTATTTTGCGATCAAGCACTGAAATACGAGAAAGGGCGTTGGAAGA
TTTCAGTAGTGATGATTGTTTATTCGAAGAATTTAGCCCTCCTTCGAAGA
GGGATTTTAAATATAGAGACTCATTTTTAGAAAGACCAGGGCAAGATTTG
GATCCTTGCTCTGATTGGCTAGGCCCAAAAAGAGAACATCGATCTGCGAA
CTGCAGTAACGATATAGATGTCTCTGTAAAGAGCACATATAGCAAAGAGC
CTCCCGAATTCGCGGGTCACAGGAATGAACATTCTCTTTTGAACAGTAGA
GACTCGTGTCTGGAAAGCTCTAATAACAACACATTTCGCACTCTTGAGGG
GCAGAAAAACCGAAATAATGATGATTTAGAAGCTGACGAAGAGAGACACA
AAAGCAATGATTCTTATGGTGAAAAATTATCTGACGAAGAAGATAAATCG
CTTAATGTTGATTTTAGTTGGAGAAACTATCGTCCAAAAGGCAAATTAAG
ATGGCTTGCCACCTGTTTTCTATATTCTTTTTATATGGTTGTGCTGTGTA
GTTTCTTGGTGGCTGCTATCTCTGTTGGGATCATGTTTGTGGATATTAAT
ACTGCAGATGCTTGTTATTTTACACCGTGGCACCGTGTACCGTTAAACGT
GCAACGTGTTCGTGTATCCGTGCAAGTGGTTCAAGGATGGATTTTACAAT
TCTTCCATATTGGAGTTTTGATTTTCGTTTTCGGTTTCAAACTGGTCGAT
CAACTTCATTTGCTACATTTGAACGTGATAGCAGCATTCATTGATTCAGT
GTATCGTCTCTTTTTCCAAGTATATGATGTATACGATTGGCCTCAACGAA
TGTTCCCTCTCAACGCCATCTTTGTTTGTGTTATGATTGCCAATAGTTAC
ACGTTAGCTAAACATTTTACAAACCAGCGTGGTCGAAAATTAATCATCAC
CTTCCAGCTTGGTTCACAGTTCATGCTTGGAGCAGCTACACTATTTTTAA
CTTTCTATCTGCTTGTTCCATGGTTTGTCAAACTGGGACCTTTTCAACAA
GCACTCGTTGCCGGAGTGTCGCCTATTTTTGGTGCTATCAATAAAGCAAT
AAGCCGGATCGTGATCCAGAACGTCTCCAATATCAACCATCCTGGGACGT
CTTATATGTTGGTTATTGCAGTTTATGCTGGTGCAGCTCTTGTTTACCGA
GCCCTTCAAGCAGAACTAGAATCGTCCGCCCTGTttctttttctgtgttt
tgcGCATGCCTTGATTGGATTCTTAGAGCGTTTATCAGTTGTCCTTCGAG
ATCATTTTTACTTTTGGTTTTATAAGAAAGTTCTAAAGAAAGAGCGTGAT
TATAACTCCTTTGTTGGTTCGTTTCGCACGCCGCGTACGCAAAGGTTAGT
TGCCGATCTCACCATTTGTAATATCATTCACGAAACTAATGCTCTAATCT
ATACCAACGCGTTTGTTCAGTTTTACTCACTACAGATTGGGATTGATGGT
CAAGAAAATGCTGTAGATGTCTATGATgttgtttcgaaatttttcaTACG
CAGcttttctgccattttgattgAATATGTTTTCACAGCTTTTGGAATTT
TCATTCTTACCTGGTACATGAATATTCCCGTCATTCGTGTCTGGCGGAAG
AAATGGAAATCTATATTGGCAGGTAATCTATTCGTATGCGCATGCTTGGT
TATTTATTCCACTCAATATTTGCTTGTGGTTGTGGCAGACCGTTATCAAC
ATACGATCCAATCAAAAAACGAAACAATGTCATGTGACCTGTCAAACATA
CCGTTCTTCAAGAAGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001731XLOC_001731Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003117-proteinTCONS_00003117-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003117-exon-sc0000025-1491911889:712254..713092TCONS_00003117-exon-sc0000025-1491911889:712254..713092Clytia hemisphaericaexon
TCONS_00003117-exon-sc0000025-1510915933:712254..713092TCONS_00003117-exon-sc0000025-1510915933:712254..713092Clytia hemisphaericaexon
TCONS_00003117-exon-sc0000025-1575043694:712254..713092TCONS_00003117-exon-sc0000025-1575043694:712254..713092Clytia hemisphaericaexon
TCONS_00003117-exon-sc0000025-1491911889:714064..714162TCONS_00003117-exon-sc0000025-1491911889:714064..714162Clytia hemisphaericaexon
TCONS_00003117-exon-sc0000025-1510915933:714064..714162TCONS_00003117-exon-sc0000025-1510915933:714064..714162Clytia hemisphaericaexon
TCONS_00003117-exon-sc0000025-1575043694:714064..714162TCONS_00003117-exon-sc0000025-1575043694:714064..714162Clytia hemisphaericaexon
TCONS_00003117-exon-sc0000025-1491911889:714573..717295TCONS_00003117-exon-sc0000025-1491911889:714573..717295Clytia hemisphaericaexon
TCONS_00003117-exon-sc0000025-1510915933:714573..717295TCONS_00003117-exon-sc0000025-1510915933:714573..717295Clytia hemisphaericaexon
TCONS_00003117-exon-sc0000025-1575043694:714573..717295TCONS_00003117-exon-sc0000025-1575043694:714573..717295Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:712254..717295 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.747553 0.806197 0.756891 0.724647 0.0482532 0.141444 0.718805 0.685626 0.723061 1.14035 1.02607 0.448045 3.01062 2.54151 4.54285 6.23995 1.238 1.6962 3.92145 2.74201 0.654148 0.926991 3.09919 3.18738 2.01696 1.62445 0.733991 0.421779 1.74945 1.22499
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003117 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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