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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003126 ID=TCONS_00003126|Name=TCONS_00003126|organism=Clytia hemisphaerica|type=transcript|length=1203bp
gtTTGAGGGTGAATTCTTTGTTCGTACGAGTTTTAACTTGGCCACGAACA
ATACTCCGAGTACACGACCACGCATACTACgacaaaaaagaagaacagtT
TCAAGCTATCCATGCCAAATATACAATGCCCGCAGGATACAAGTGAAGCC
ATCCGACAAAGACCAGCATTAAATCGAACGAAATCGGAAGATAGTCAAAC
GAGTGGTATTGATATGCGAATCTCAGAACAAGATCTCGGCTCGGATGCCG
AAAGTTTACCGTCTTGCGAAGAAAGCTTAACGAATTCCGAAAATAGTCCA
CCGAACAGCCCCGAACTTTTTAAACAGAAACAAGAAGTTAGCCGACGTGA
ATCTGCTCCTGCGAGTTTCAATATCAAGATTTTAGACGACATACAAGGTT
TGAATGAAATTAATGAGGAAAGATCGAGAGAATTTCATCGACGATATAGT
TCAGTCGAGGAACGAACAAGTCGTGTTCGATTTAATCTCGAGGAATCTtt
taaagaagaagaagaccATTATAGTAAacaatttgatgaaaatgaagagC
AGCCAAAATTTTCGGACATTGAAGGGTATAAGGTTGCTCCTTTAACTCAA
TATCCACGCAAAGTTTCAAGTCCTCCTTGTTTGTCATGTGATATCGAGGA
AGTGCGACAAGAATATCAACAGAACCAGCAAGTACCGACAGCACAACGAA
AAGACTCGTCGGACCGTTCTCGTAAATGTTCGGTATACTCTGATAATTCA
GGATCTATTCAGATTCTTCCAGGACAATCTGTACGAAAAGTTTCGTCGCA
AGAAAATTTAATTCGCGAAGAAGAAGAGTCGACGCCTATTGCACCTTTAC
GAAATAAATATGATCGTAAAATAAGTTTACAGGAACCTAAATTACGGAAA
GACTCACGTGTTGATAATCGTAAGTTGAGTCTCCAAGAGAACTCTAGCCG
ACGAAAATCGGTATGTATTGACGAGAAATCTACAAACGAAAACTCACGAA
AATTTAGTTTACAAATACCTCGAAGACGCCCCAGTTTTTCAGATCGTAAA
TTAAGCTTACAAGAACGTAAAAACTCAACACACGAGCGTAAAATGTCATC
GCACNTTGTCTCTTAAgcttttggtttgtttttgtggaatttaaTCTGTA
TTGATGGGGTattaagatttttgtaaggGCCCAGTCATAGTTTTCGGATA
TTC Run BLAST on NCBI transcript from alignment at sc0000025:770980..772675+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003126 ID=TCONS_00003126|Name=TCONS_00003126|organism=Clytia hemisphaerica|type=transcript|length=1696bp|location=Sequence derived from alignment at sc0000025:770980..772675+ (Clytia hemisphaerica)
gtTTGAGGGTGAATTCTTTGTTCGTACGAGTTTTAACTTGGTAATTGTCC
CTTGTCCGATTTTGCTGGCTTTAGTGTGTCTATGcttgctttttttattt
ttggacaatttcaaaatttctcttcaacaatttatTCATTTTGCATTAAG
CTTGTTAACATGCAATTTTCAAAATGCTGTTACTTTTATTGTTGATTAGC
AGTGTTAAGAGAATTGACAGCAATTTATCATTGCCAAAGTTAATTAACTG
AATGTACAACAacgaaaaattaatgaaatgaGTTTGTTAGTATTGCGGTA
TTAAACCAATAGGTGGTTGATTTAATTAATTCCACTTTGATTTGATTGCG
TTATCTTTATTCATTTGAATTGAGTCAAtcttgtattttcattttctgat
cTATATCGCAATTTGTTGAAATCTAATATATGCGGTCTGTTTAGCCGAGT
ATTTGATTTGTGTCTGCTTGGGATGTCGTAGATTTATTCATGCAGCATTT
TTGTAACTTTATAAATTTACTTTTCTTTGTCAGGCCACGAACAATACTCC
GAGTACACGACCACGCATACTACgacaaaaaagaagaacagtTTCAAGCT
ATCCATGCCAAATATACAATGCCCGCAGGATACAAGTGAAGCCATCCGAC
AAAGACCAGCATTAAATCGAACGAAATCGGAAGATAGTCAAACGAGTGGT
ATTGATATGCGAATCTCAGAACAAGATCTCGGCTCGGATGCCGAAAGTTT
ACCGTCTTGCGAAGAAAGCTTAACGAATTCCGAAAATAGTCCACCGAACA
GCCCCGAACTTTTTAAACAGAAACAAGAAGTTAGCCGACGTGAATCTGCT
CCTGCGAGTTTCAATATCAAGATTTTAGACGACATACAAGGTTTGAATGA
AATTAATGAGGAAAGATCGAGAGAATTTCATCGACGATATAGTTCAGTCG
AGGAACGAACAAGTCGTGTTCGATTTAATCTCGAGGAATCTtttaaagaa
gaagaagaccATTATAGTAAacaatttgatgaaaatgaagagCAGCCAAA
ATTTTCGGACATTGAAGGGTATAAGGTTGCTCCTTTAACTCAATATCCAC
GCAAAGTTTCAAGTCCTCCTTGTTTGTCATGTGATATCGAGGAAGTGCGA
CAAGAATATCAACAGAACCAGCAAGTACCGACAGCACAACGAAAAGACTC
GTCGGACCGTTCTCGTAAATGTTCGGTATACTCTGATAATTCAGGATCTA
TTCAGATTCTTCCAGGACAATCTGTACGAAAAGTTTCGTCGCAAGAAAAT
TTAATTCGCGAAGAAGAAGAGTCGACGCCTATTGCACCTTTACGAAATAA
ATATGATCGTAAAATAAGTTTACAGGAACCTAAATTACGGAAAGACTCAC
GTGTTGATAATCGTAAGTTGAGTCTCCAAGAGAACTCTAGCCGACGAAAA
TCGGTATGTATTGACGAGAAATCTACAAACGAAAACTCACGAAAATTTAG
TTTACAAATACCTCGAAGACGCCCCAGTTTTTCAGATCGTAAATTAAGCT
TACAAGAACGTAAAAACTCAACACACGAGCGTAAAATGTCATCGCACNTT
GTCTCTTAAgcttttggtttgtttttgtggaatttaaTCTGTATTGATGG
GGTattaagatttttgtaaggGCCCAGTCATAGTTTTCGGATATTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003126-exon-sc0000025-1491911889:770980..771019 | TCONS_00003126-exon-sc0000025-1491911889:770980..771019 | Clytia hemisphaerica | exon |
| TCONS_00003126-exon-sc0000025-1510915933:770980..771019 | TCONS_00003126-exon-sc0000025-1510915933:770980..771019 | Clytia hemisphaerica | exon |
| TCONS_00003126-exon-sc0000025-1575043694:770980..771019 | TCONS_00003126-exon-sc0000025-1575043694:770980..771019 | Clytia hemisphaerica | exon |
| TCONS_00003126-exon-sc0000025-1491911889:771513..772675 | TCONS_00003126-exon-sc0000025-1491911889:771513..772675 | Clytia hemisphaerica | exon |
| TCONS_00003126-exon-sc0000025-1510915933:771513..772675 | TCONS_00003126-exon-sc0000025-1510915933:771513..772675 | Clytia hemisphaerica | exon |
| TCONS_00003126-exon-sc0000025-1575043694:771513..772675 | TCONS_00003126-exon-sc0000025-1575043694:771513..772675 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025 | supercontig | sc0000025:770980..772675 + |
Blast
The following BLAST results are available for this feature:
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