TCONS_00003135 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003135
Unique NameTCONS_00003135
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3635

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003135 ID=TCONS_00003135|Name=TCONS_00003135|organism=Clytia hemisphaerica|type=transcript|length=3635bp
atcctctctaaatcgaaatctattggaattaatagggtattttcttattc
ctaatgaactaaNCATGTCAAACTACATGAAGCAGAACGTGCAGCAGAGG
CCCAAGAAAATAAAGACCAAAGAGTTGTAGAGCAACCACCCTCGCCATCA
GATGATATAGTAAAAGAGCCTCCAGATGAAGAGAATTCAAACGGTGAAAA
CAAAAAGCTGCAAGATTCCAGTGATTCAGAGGAAGCGCGTGATATAACTG
AACAGCTGACTGAACCCATTCATCGACAAGACAGCAAAACAATTGATGAT
AGAGAGATAACAATGGATAACACATTGTCAACAACAATTGAAAGAAGTGA
TGGCGTGATAGAACAAAATGGTTCTGATGCTGGTGAGGATGATTTGGATG
TCAGGCATGCAGTAAATGATGTTGATGAAAGAAATGTCgaaaaaaacgat
caaaatgATGTGAGATCACCTTCACCCTGTGTCTCAGAAGAAATCCCTCA
TCCATCACCAAGACAACCAGAAGAGGACGAAGATGAAAAACCGATTCAAA
AAATGGATGAAGAGGGGTATGTTGAAGATAAAAGACAGATTGAAGCAGAG
GACAACAATATGGAAAGAAACGGTGTTAAAGAGGATGAAATTGAAGCTAA
GAGCGGTGTTGATAGTGATGCTGGCGATGACAAAGAAAAGAGTGAAGAAG
TGGATAAACCAATTACGTCAATTCTTCACGAAGAAGAGGCATTAGATTAT
GAAgattttgaagaagaagaaaatattgttcaagAGAAAATGCCACAAAT
CGACGGTGAAGAGGAGGAAGATcacaaagaagaagaaaaggaagaccAAA
ATAAcgaagaagagaaagaagaaaaagacgAAGAAATGGAGGAAGGGGAA
GTCGAATCACCGACTGTCAAAACACAAGAAGAAAAAGTAGAGAAACCTCA
ACCGaaacctGTACAGTTGAAGAAAGGTCGTGTTTCGTTGGCAGCTTCAA
CAGAGACGGCCGAGGAGAGGGCAGCCAGACGTAAACGTCGATGGGGCTCA
ACTACTTTGAAAAATTCATCTGCTCCCGTCAGTTCTGATTCTATCAAGAA
ATTGATACCGAATGTCACAGTGGATGCACAAGATGTCCCAGAGACTTTAG
ATTATGGTTCAGATAGTGCAGCTGATTTGGATAAGAAGATGCGGACGGTC
AAGCTAGACTCTGGTAAAAAAGTCACCTTAAAAAATACTAACAGGGCTGA
TACTTCTGACCCCGTAGTTATCGAACTCGATAAAGCCTCACGAAGTGCCA
CTACTACTGACGACAAAATCTCAATCAAAAGTTGTTATGAAAATGTTGAA
TTTCTACGCGAAATTTCGACAACTATTCAAAGTTTAATAATTACTTGAAT
ACTGCTTTAAAAATGAACTACGTTACACTGcagtatgaaaaaatatttat
gtgaagaaattcaaaatgtgAGTGGGATACCGTCGAGAGAGCTGTTACTT
TCCTTGATATGAACAATGCTACTGGAAAGTaaccaaaaagaaaattgtCA
GAGAGAGTCAACACTCTGATTACTACATGAAACCCCCACAACGTCACTTT
TTTATGAACTATGCTATACTAAGTGTCCATCTATATCGTCAATTGCTCAA
TGATATCCTTGCTGGGTTGCCAAATTATGACAACCGAAACTCTTCATCTA
GTGGTGTTACGCAATGGTCCAACAATCCTGGAAAGTATCAATGCCCTTCG
TTCCTGTAttgctgaaattttgaattgtgaACTACGTTTTGTTTTGCTGC
AAAATGTTGGATTGTAAACTACGAATTGTCTTGCTGTGGAATTTGTTTGA
TCGTAGTACTATTTTTTCTGGAACTGAACTTTGCATGCTGAATTTGGAGA
TTGTTTTTGTGTCGTTAGTTAAGAGTTATGTATTGCTGTTTACAATTTTA
TCCTGACTCAAGAAGAAGAAAGTTTCCTGCATACATCAATGAGCATCGTA
TAATACCAAATCTACACCAATGAACTACATTTTGATTTCGCTGTTTTGGT
TGGATTTTGTGGGCAACAAGTCGGTTATTCAAGAGAAATGATCTTCAATG
AACTATGTCTAAACAATAGATCATTTTCATACCAGGCAGACGACAAGCTA
ATAATCATAAACGAAGTCACAACTGAAAGCTGCATAACTGCGAAAGCATT
CTTTATGAACTACGAAACTACAAGAATTGCTTACAAACaaagtcattaat
aaataccGTTCAAAACGCCTGAAGAAGTATTTCAAATTCCATGGAATAAT
ATCTCTTAAAGTGTCTCAGCCAATCTTATGAACAATGTCTATAACAAGAT
TGCAGCTGTCATATTTACACGTTATACAAAAAGTTATGATTGAGTTCACG
GACCTTCTAACTGACCTAGATTGAGAGAGAGCAGAGTTTTTGACGGTGGC
AAATAAAGCTCCCAACGCGAGATTTCAATTGCCATGTTTTCtctaagatt
tttcaattcagCAAATGTCTAACCGACGCAAACTCGGCATCAACTACTCC
TAAAAAGAGACCACGAGTCTCGATATCCCTAGATCTTCAAGAGGAGGATC
AATTGGAATCTCGGGATGATCGAGACAGATCACCAAGCCCACCAATGAAT
GACGTTTCAGTGTATTTAATGATCATCAATTTGGTTCGACCCTTCACCAA
CAACCAATTGAAAGCCTTGATTTCGAAGACGGGAACGATTGAAGATAATG
GATTTTGGATCAATTCAATCAAATCACATTGTTACGTAAAGCTTTCAACG
ATAGAAGAAGCAACGAACACTCGCAAAGCATTACATAATTTGAAATGGCC
TTCTGGGAATCCCAAATTGATGAAGGTGGATTTTGCTGTCATGAATGAGA
TGTACCGCGAAACGACCGGACAACTCGGTGAGCGACCGAAAGTAGTCGTC
GAAATTAACGACGAAGAATCGGCTGACGACGTCGTCTTTACAAAGCGTCG
GCAACGTGTTGCTGAAAACCGACGAAAAAGTACCGGCGACGAACGAGAGA
CGACAGAGAAGAAACGAGAGAAAAGTCCTGTCAAATTATTGGATGACTTA
TTTCGAAAAACGAAAGCTCAACCTAGTATATATTGGTTACCGCTGACAGA
TGAAGAAatcaagaaaaagaaagaacgCGACGCTGCAAACGCAAAAGGTA
CGCGCGATCGTGGTCAAGCGGACGAACGAAGACGCTCACCCGAAAGACGA
AATAGATCACCTGAACGTCGAGTGCGTTCTCCAGTACGTAGAAATCGTTC
GCCTGACAGACGCTCCGGTCGTAGTTGGAGGTAGCCGGCTCACCGTGACA
ATAAGGAATCAAGTCTTTTTATGACAGGTATCAATGTCTGTTTTAGAGAT
GTAAATAACCTGAAGTCTGAGCTACTACTCTTAGAGAAACAATGATCGTA
AGATGAATCTTAACGGCGTGCGGACGATTGAATTACCGCATGGAATGTCC
GCGGTTTTATtcccttttttatattttggaatgtaaatgtaaataaaaat
ggATCTTAACACTAAATTGAACAATTTTTAGTAAAATTGGGctaaagaca
aaaagaaaatgattattttaTATTATCTTTTAAAG
Run BLAST on NCBI

transcript from alignment at sc0000025:961699..972865+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003135 ID=TCONS_00003135|Name=TCONS_00003135|organism=Clytia hemisphaerica|type=transcript|length=11167bp|location=Sequence derived from alignment at sc0000025:961699..972865+ (Clytia hemisphaerica)
atcctctctaaatcgaaatctattggaattaatagggtattttcttattc
ctaatgaactaaNCATGTCAAACTACATGAAGCAGAACGTGCAGCAGAGG
CCCAAGGTAAGTGTTTTTATAAAGCAAACTATTTTACACTCCAAAAAGTC
ATGATCTCTAGTATTATAAACAGACAATCATACAGTTTTTGAGTATTCTC
AATTCTCACCATGATATTTTAAGCCTTATCcaattttaataatttatacA
GCTCCCTTTCTCTGAATACGctcaaaaagaaaatcttatgtcaaaaagaa
aaaaagttttctccaATCTTAACAATAGNaatagtccatttcaatattta
ttgttctaagttagatattttaacgaaaatgtttgacctaccttttgggg
ttagttgacctacaatttgggggcCTTTGTAACTCGACAtaaaaagtttg
tcaaattatataaaacttttttgttgtactttcataacatgaaagtatta
cctgagagatgattaatgttggcattttaagcttttacTACGTGTCCCAG
ACCANAACCTTTCATCAATGGGTCTGTTAAAGCTTTCTTTGAAGAGAAAA
CCTTATTGAGTAGTTATTTatcaatttgtttttcttttgaaatgtcTTAT
CTTATCAGaatattttgattaattttatctactttctaaTTTGGAGtatt
cttttttaaatgttgTTTGGAATTTACTTTATGACTTTATGTTTAATTCA
TTGCATAGAAAATAAAGACCAAAGAGTTGTAGAGCAACCACCCTCGCCAT
CAGATGATATAGTAAAAGAGCCTCCAGATGAAGAGAATTCAAACGGTGAA
AACAAAAAGCTGCAAGGTTAGCTTTGGATAGCCGNATTTTAACACAGAat
cttcaacctacaaaataaaaacaactttcttgtctcttcttttcgtcctt
tcttttacttttcatcatttgtagcactataaaattaatatctttgttaa
ttttttgtcagagtatatttctaaagtatgaatttcacttagagaacaaa
actttccgatgaatactgaaatttcgctctcagcaaccgaatcttttcac
ctacattcttgGGGCTAAgagcgaaaaaatccaattttcagaataccaaa
agctctttagaatattgttttggcaaaaaatatttctaaaatttcctgtt
ataattaattcaattgaaaaaatatcaacattttactataaCTAGATTTA
AAGCCCATAGTTCgaccccccccctttcttaaggggggggatgacacctt
ccaaaaaagtgaagaatcagggggatcagaaattttcattaaaaaggggg
ggatagcaaggaggggggatcgtttaagaaggggggcttacatatattgt
aagttattttccagcactgttatgaaatttggtctgcatgaaaggaagtt
ctttattttcactaaaaagtggtatatatttgccagacttaatttttctt
tactgtttcccctccctttttaccataaaaaatttagcccaaaacccttg
ggggataggcatttttaaaggttgtgGGGATGTCAAAAaggggggatcat
ttaagaaggggggggggtcagacccctttccgcactatgaagccataaaa
ccaaacctacattctgggggttataacgatAATTATAAGTCAacttcaaa
gaccaaagaaattagcctatctatcaaaagtaatgaaactaacccctggg
aaaggattttgggagttcaaatttcgtttaaaacattcaatattttttta
aatgcaaatctacatctctcaggtctgattcaaatttcacctacattctc
ggggtcaggtgctgtaatattttgattatttttataatcagccaacttgt
ttcattgttttcaactagtcggaactaactatcatctgttttcaagtggc
aagtggaatgttatagtaggaatcggaatcttacgtgatcctacggtaag
ggtctcaaaatcagaactgatgaagtctaggtttgaaaggactattttgc
aagtataagctttaaaacgacGCTTTTACAAGGAGGACGAGAGCAAATGC
TTGCTTTGTTTGATTACCTATGTTGTGTGGGAAATGCGCAAGGCTCAGAA
GGTTTCGATTTCGAACTCGAAAAgaatacaattttcaaaaaagaattccG
GAAACAATGTTGTTAGTACCACTATTCAGCTGGACATTTATTCTAAATAG
TTCAATAGAGATATCTTTGAAATTAGCCTCGATCCCTTTAAGAGGGCGCA
ATGGCGGGCGTGTGGTGCGAGAAAACAGCAGCAAAGCGCCTGTGTTGGCC
GTGTgataagtatttgcaaaaagctgtttGCCCCTCGCAGGGGTCTGCTC
ACCACCGTNNGCAATTTTAGATACCCTGTCAGTAATTCTGCAacactgaa
aaaggtaccctgaccagcggcacgtccccgtacctatttttgcctaagtg
ccccccccggggccgaaataattttattttgaagcaagTTGTACAAAAAT
GATAGGTATTGTAATGTCTTGTGAACTGAGTTCaggcaattaaaatttta
attgaaatggTGATGACAAAATATAATATAACACACATGTTATTGTATGC
TTGAATGTTTACCATAGATTCCAGTGATTCAGAGGAAGCGCGTGATATAA
CTGAACAGCTGACTGAACCCATTCATCGACAAGACAGCAAAACAATTGAT
GATAGAGAGATAACAATGGATAACACATTGTCAACAACAATTGAAAGAAG
TGATGGCGTGATAGAACAAAATGGTTCTGATGCTGGTGAGGATGATTTGG
ATGTCAGGCATGCAGTAAATGATGTTGATGAAAGAAATGTCgaaaaaaac
gatcaaaatgATGGTATAGTTTTGAATTTAATAAGTAACCTTTTATTGTT
TGAATATTAATTTCTAAAATATAGACTTCTCTCTAGtttagacagccaac
ttttTGCCATGGCTATTTTAATTTGCTTCAGTATGCAAAAAGTGTACACA
AATATGACAATTAAAAGCTTTGTTTAGAAAAGATTGacagaagtcattgc
attggcGCCAAAGGAGGGAAATGCAGTATTTACTTTTTATAGACAcccaa
tattttggccatttgaATTCGTAGGGGGGGAAATTGGCCGTCTAAAAAAT
TTCTTCTCACTTGCAAAGTAGTCATGGCGCATACTGTACCTAAAAAATAC
CTCacacaattttcaaaactttcaagtTGAATTATGTTTTGTTATGAATT
AtgaagtttttgtaaaaaagctgATTATTTTATTTCCATTTAATTTAAGT
GAGGGCTGTAGTGAGATCACCTTCACCCTGTGTCTCAGAAGAAATCCCTC
ATCCATCACCAAGACAACCAGAAGAGGACGAAGATGAAAAACCGATTCAA
AAAATGGATGAAGAGGGGTATGTTGAAGATAAAAGACAGATTGAAGCAGA
GGACAACAATATGGAAAGAAACGGTGTTAAAGAGGATGAAATTGAAGCTA
AGAGCGGTGTTGATAGTGATGCTGGCGATGACAAAGAAAAGTATAAACCC
ACCattattcatatttttttcaaacatcaGATTTCAAACATTGTCTTTCT
ATATTTTAAAAGTGATTGCTAAAACAATGCTTGTGTTTTGGTATCAAGGG
GTCCTGCCCTGTTTTTTCGAGTACAAATGGCAGTAAAAAAGATACTTATA
ATTCTTTGCTTTTAAACAAATACTTTTGCTATATGTAAAAATTCTTTTAT
AATCTAATTCCTTCGTTTTTTTAGGAGTGAAGAAGTGGATAAACCAATTA
CGTCAATTCTTCACGAAGAAGAGGCATTAGATTATGAAgattttgaagaa
gaagaaaatattgttcaaggtaaaataatatttcaataaaaaaagttttc
ttcaaaaagccctttttttgtagttttttttgtaatggacgggaatttta
tacacgatacgtaTCCCATATAtcaaacatatcagaggggatgtgagAAT
CCTATATTTCCTCACATGCAAGGATGACGAGATATAATTGTTGTGAAATG
TAAATAATGATTGCATTCTAAGAACAGATACAACAAATTCCTTACTCAGC
TGACTTGCATTTAAACAGATCTTATTTTTTGAGTCAGTCATTTGTATGGG
CTACTTAGTATTGGTACtttagtatttattttttttgtatttaggTTTTG
CACTCTATTTTTAAGTATAATAGGGTATCAAGCTTAAAATACCTCAGTTG
TGCTctagaaataagaacatgattttaaagaacaatttaaagctcaaaat
gtcaaaaaaaagaactTCCAAACGTCGCCAAAAAATCtactgtttttttt
aaagagtgtAATTCCTTTTACTTCATCCTAAGGTTTGGGTCAGAAAAGTC
TTTTATTATCTCTTTATCTTGAAAgaatatatttcttttttctattgatA
AGCTCTGGAAGTAGCTTGGGGATTATTATATTGATTTCTCTTTTATTAGC
AATTCTTTCTTCCAAAACTAGCAAGCAAACAAAAAGAGAAgaataaaaat
cttgaaatgaaaaataaaggaaaagtTGAGAAACCCAGAGTTTTACTTAT
AATGAATTTCTACTACGAACATGGAAAACCTTGTCTGATTACTGTCTTCA
ATTTTATATTCGACGACTTGAGTTTGTTTAGTATTTGACAttgtttttgt
tcaaaaaatattttcgggcAGCATATAGAGGCTTGTTTAGAATAGGCCAA
GACTCGTTTGTCGTTTGTATCCCTTAAAAAGCAACTTTTTGTGTCACACA
GAGAAAATGCCACAAATCGACGGTGAAGAGGAGGAAGATcacaaagaaga
agaaaaggaagaccAAAATAAcgaagaagagaaagaagaaaaagacgAAG
AAATGGAGGAAGGGGAAGTCGAATCACCGACTGTCAAAACACAAGAAGAA
AAAGTAGAGAAACCTCAACCGGTCAGTTGTCCATCCCTCTGTCTATATAT
CTTTTCGTTTCAGAAATTCGTCTACAGGCTATCTCAAATATAATCTACAG
CAGaaacaaaaaaggctgtaacttctGATTAAGTAGAATCAAAAAGCGAC
TTTGTGCTCATTGAAAAGGTATTCAGAAtatttcatagatttttttgaGA
CATACATTCAGTTGGAGTTTTTGTATCTCCTTAGATTCTTTCTGATTCCC
TTTCTAAAAAGATTATTATTAAGGAAAGTCACTAAAAAGTGTTATTCACC
TTTCGGAaccattttcttatttttttttagaaacctGTACAGTTGAAGAA
AGGTCGTGTTTCGTTGGCAGGTAAGATTGATctggaaaattttgagtttg
aaaGCTAAAATTGATACAGCGCTCATCCTCTACCTAACAAGAAGATGTCT
GtttttatcattattacatGGGATACCAAGTTATCTCTTgacattgaaat
atttattttgatttctaGCTTCAACAGAGACGGCCGAGGAGAGGGCAGCC
AGACGTAAACGTCGATGGGGCTCAACTACTTTGAAAAATTCATCTGCTCC
CGTCAGTTCTGATTCTATCAAGGTAAAGAAATCAACCACCACTTTAGTCG
ATCAAACCATTTATTCCTTTGCTTAAAATGTATACGCCTAAACGATTGTT
GTACTGgaggaaaattacaaaatggtAATTTTTTATTGTCCAATACACAA
TTACAATCTATTACAATGACTTCTggcattacatcatggacccaaaagct
gattggttgtaagagACGTAAAATCAgacaatacgtcactttcaaccaat
caactgttgggtccgtggaagacattgcaatggtgtatatcatgaattaa
cCCTTGCTACACGGGGGTTGGGATCAAGATTCCCAGGGTTGGATGACGTC
AACAATTTGCATAATCTGAGCTTGTTATTGTAATGACTTTAGACAAATGA
CGTCAACCCTAGTAAACGGGAACTGAAAACCTCACCTTCTTTCGAATTTT
ACAGTAATGAgttctttattttattatttgtaaCAGAAATTGATACCGAA
TGTCACAGTGGATGCACAAGATGTCCCAGAGACTTTAGATTATGGTTCAG
ATAGTAAGTTACACTTAAAGCATAAACATTCTTTTCATATGCGTAGGTTA
TGCGTTAAAACAGCTCTTTGGCCTGTGTTGCCATATGTGATATTTTAAGG
CTGGGTCAAACATAAAAACATATCTAACGTCATTCTCGACTTTTAGGTGC
AGCTGATTTGGATAAGAAGATGCGGACGGTCAAGCTAGACTCTGGTAAAA
AAGTCACCTTAAAAAATACTAACAGGGCTGATACTTCTGACCCCGTAGTT
ATCGAACTCGATAAAGGTTTGTGTACATTGTATGATTTTGTAAGGCTTCT
TTTACATGTTATTGTGTTTTTTTGGGACTCAAGCTCTCAGTCATTTACAC
TCACGATTGCGTTCTTTTGTGTCGTatgcaataaaaaattctaaaaaaag
acAATATTCCAGCGAAATGTATTTGTCTTGAAAGATATCCTTTAACACAG
TTTACGATGACTGAGAGTTTGTCGTCCAGGGATGATGACTTTCATTATTA
TGTCTGTATAATGTTGAACTTGTTTTCTTGCGTTGTAAAGCCTCACGAAG
TGCCACTACTACTGACGACAAAATCTCAATCAAAAGTTGTTATGAAAATG
TTGAATTTCTACGCGAAATTTCGACAACTATTCAAAGTTTAATAATTACT
TGAATACTGCTTTAAAAATGAACTACGTTACACTGcagtatgaaaaaata
tttatgtgaagaaattcaaaatgtgAGTGGGATACCGTCGAGAGAGCTGT
TACTTTCCTTGATATGAACAATGCTACTGGAAAGTaaccaaaaagaaaat
tgtCAGAGAGAGTCAACACTCTGATTACTACATGAAACCCCCACAACGTC
ACTTTTTTATGAACTATGCTATACTAAGTGTCCATCTATATCGTCAATTG
CTCAATGATATCCTTGCTGGGTTGCCAAATTATGACAACCGAAACTCTTC
ATCTAGTGGTGTTACGCAATGGTCCAACAATCCTGGAAAGTATCAATGCC
CTTCGTTCCTGTAttgctgaaattttgaattgtgaACTACGTTTTGTTTT
GCTGCAAAATGTTGGATTGTAAACTACGAATTGTCTTGCTGTGGAATTTG
TTTGATCGTAGTACTATTTTTTCTGGAACTGAACTTTGCATGCTGAATTT
GGAGATTGTTTTTGTGTCGTTAGTTAAGAGTTATGTATTGCTGTTTACAA
TTTTATCCTGACTCAAGAAGAAGAAAGTTTCCTGCATACATCAATGAGCA
TCGTATAATACCAAATCTACACCAATGAACTACATTTTGATTTCGCTGTT
TTGGTTGGATTTTGTGGGCAACAAGTCGGTTATTCAAGAGAAATGATCTT
CAATGAACTATGTCTAAACAATAGATCATTTTCATACCAGGCAGACGACA
AGCTAATAATCATAAACGAAGTCACAACTGAAAGCTGCATAACTGCGAAA
GCATTCTTTATGAACTACGAAACTACAAGAATTGCTTACAAACaaagtca
ttaataaataccGTTCAAAACGCCTGAAGAAGTATTTCAAATTCCATGGA
ATAATATCTCTTAAAGTGTCTCAGCCAATCTTATGAACAATGTCTATAAC
AAGATTGCAGCTGTCATATTTACACGTTATACAAAAAGTTATGATTGAGT
TCACGGACCTTCTAACTGACCTAGATTGAGAGAGAGCAGAGTTTTTGACG
GTGGCAAATAAAGCTCCCAACGCGAGATTTCAATTGCCATGTTTTCtcta
agatttttcaattcagCAAATGTCTAACCGACGCAAGTAAGGATTGAAGA
GACCTCCTACtagtataaatttttatttcgttTCAGGGCCTTGACCTAGC
TAACCTTAAAGCCCTTGCTTTTTGGAACTTCTCCTCAAATCTCCCATTTT
CCGGGTTTGAATTCGCGTTGATGCCTTTTATCCAGGTGTTGACTTCCCTT
TGACAATGTGTGAGGTTTTCATGACCCCTTTTTTTACTGATCCTTGAAAA
CATCCGTAGCTTCACGCTTGATTTTCTTCATTGATTTTTTAATGCGAAGT
CTCCCAAAATTTTATTTGCGTATTCTTGATGCCTATATCGTAGGAAACTT
ATCTTTCTATTCCCAATTCGAATGCCAATATCTTCTTTCTTTCACACAGA
CTCGGCATCAACTACTCCTAAAAAGAGACCACGAGTCTCGATATCCCTAG
ATCTTCAAGAGGAGGATCAATTGGAATCTCGGGATGATCGAGACAGATCA
CCAAGCCCACCAATGAATGACGTTTCAGTGTATTTAATGATCATCAATTT
GGTTCGACCCTTCACCAACAACCAATTGAAAGCCTTGATTTCGAAGACGG
GAACGATTGAAGATAATGGATTTTGGATCAATTCAATCAAATCACATTGT
TACGTAAAGGTATGTGTCCATCTCTGTGAATACgcattatatcaatgcag
tcaaaacatgcgattcctcgaaaaagttcacatgattttattcccatgtt
acttgttTTACAACTTACaactgataactttattagtgtcaatgaATTCG
AACCAAtaagaaataaatgtcatgtaatcagcacataaaaatttcgagta
aaagcgtgatttgtcttcagactttaattttgcaaccttttGTATTGATT
TAATTTTCTTGACGTTACCCTACCATGGTATTAAACGTTAGCTATTTGAA
CAATTACGACAACGGTCTTTTCCCTGAAGAGTTGGAACAAAATGAGAATG
ATGATTTTAGATTAAGCAGGATTAAGTTCAGTTGAAAAGCATCAATTAAT
TTGGCTTGGGAATCTGTGCATTTGACATATTTTGTTCTATGATTTCTAGA
CcccttgaatatttttataccACCATGATTgcattttatttctattctcg
TAGCTTTCAACGATAGAAGAAGCAACGAACACTCGCAAAGCATTACATAA
TTTGAAATGGCCTTCTGGGAATCCCAAATTGATGAAGGTGGATTTTGCTG
TCATGAATGAGGTGAGATCTAAGATATTCTACCCTTAACATGTAAATTTT
TTCCTATTATTATTTGTTCCTCGAAATGCTTCATTCAATCGATACAATCa
tcttttacaattttacatCGAAACATTATCAAGCTCGACTCCTTCAGTTC
CATCATTATTGACTGAGACTCTTAGAGGGTGAGTTTTATATGGATGTGGT
GACCGAAAATTAAATCGGATTTTTCGGATTAGGTATCAGTACACTAATAT
TAcaggtaccttatcggggaaaaaaatgtcggagttttatttagtcgggt
tttttttcgtcaggaaaaaatttcgtcacctagaggcattttcgtcactt
ttccccgaccaaaatttcaaattcgtcactttcacccgactaaattgtcc
aaaagaaatggtttccttcactagctcgaaaatggatcttgtaattcgac
gtttaaatcactaatttcggtaaataaaggtgtaaaaaaattagatttaa
attttggtTGCGGTATAAAATTTTGGGTAAATGTTTGGGTTCGGGATAAA
AAAAATCGGGTAccagttttggtcgggtgataaaatgtcttggaaatatt
tcgtcggggaaaaatttcgtcaccccatcaaaattttcgtcactttcccc
cgacattttttcccccgataaggCAACTCGAACTCGAACAGGAAGtctaa
tttgttcgagttacagaaagatttgaattattGACTTTGACAGAGAATCA
GTTCAAATTAGCCAGATTtcatagaagttcgaattagccaGATTCCACTG
TATGCTTACTgaactttgaaaagaaaattatttatgaAGTCATCttctga
ttttcattttcaatttcattttgattttttcatgtcAGATGTACCGCGAA
ACGACCGGACAACTCGGTGAGCGACCGAAAGTAGTCGTCGAAATTAACGA
CGAAGAATCGGCTGACGACGTCGTCTTTACAAAGCGTCGGCAACGTGTTG
CTGAAAACCGACGAAAAAGTACCGGCGACGAACGAGAGACGACAGAGAAG
AAACGAGAGAAAAGTCCTGTCAAATTATTGGATGACTTATTTCGAAAAAC
GAAAGCTCAACCTAGTATATATTGGTTACCGCTGACAGATGAAGAAGTAA
GCACGTCTCTTTTACAATCCCAAAATCGGTGTTTTAAAAATGACTCTTCA
TTGCCAATCTGGGTTTATCATTAGGGGAGGGTCAAGGTTCAAGCTCTTTC
ACTTTCTTGAGTCAAGTTgaacattttacaagaatttttgtcattggatt
ggtcgttaactattcaaacaaaaacttttattatatttttctaaagaacg
cgtcatctctattgttttgaataaccaattatgtgagcatcttataaaaa
cttcaacaCAACTGACTTTCTTGGAGTTGTTAAGCCACAAAATTTTGTAC
CTTTGTAACCCTTGTTTTGATATTATAATGTTACAGTTGCTTCTTTCTCA
TTCatatgacaaatttttttttttttctatttaattcagatcaagaaaaa
gaaagaacgCGACGCTGCAAACGCAAAAGGTACGCGCGATCGTGGTCAAG
CGGACGAACGAAGACGCTCACCCGAAAGACGAAATAGATCACCTGAACGT
CGAGTGCGTTCTCCAGTACGTAGAAATCGTTCGCCTGACAGACGCTCCGG
TCGTAGTTGGAGGTAGCCGGCTCACCGTGACAATAAGGAATCAAGTCTTT
TTATGACAGGTATCAATGTCTGTTTTAGAGATGTAAATAACCTGAAGTCT
GAGCTACTACTCTTAGAGAAACAATGATCGTAAGATGAATCTTAACGGCG
TGCGGACGATTGAATTACCGCATGGAATGTCCGCGGTTTTATtccctttt
ttatattttggaatgtaaatgtaaataaaaatggATCTTAACACTAAATT
GAACAATTTTTAGTAAAATTGGGctaaagacaaaaagaaaatgattattt
taTATTATCTTTTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001738XLOC_001738Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003135-exon-sc0000025-1491911889:961699..961804TCONS_00003135-exon-sc0000025-1491911889:961699..961804Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1510915933:961699..961804TCONS_00003135-exon-sc0000025-1510915933:961699..961804Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1575043694:961699..961804TCONS_00003135-exon-sc0000025-1575043694:961699..961804Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1491911889:962457..962564TCONS_00003135-exon-sc0000025-1491911889:962457..962564Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1510915933:962457..962564TCONS_00003135-exon-sc0000025-1510915933:962457..962564Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1575043694:962457..962564TCONS_00003135-exon-sc0000025-1575043694:962457..962564Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1491911889:964366..964611TCONS_00003135-exon-sc0000025-1491911889:964366..964611Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1510915933:964366..964611TCONS_00003135-exon-sc0000025-1510915933:964366..964611Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1575043694:964366..964611TCONS_00003135-exon-sc0000025-1575043694:964366..964611Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1491911889:965060..965288TCONS_00003135-exon-sc0000025-1491911889:965060..965288Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1510915933:965060..965288TCONS_00003135-exon-sc0000025-1510915933:965060..965288Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1575043694:965060..965288TCONS_00003135-exon-sc0000025-1575043694:965060..965288Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1491911889:965523..965617TCONS_00003135-exon-sc0000025-1491911889:965523..965617Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1510915933:965523..965617TCONS_00003135-exon-sc0000025-1510915933:965523..965617Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1575043694:965523..965617TCONS_00003135-exon-sc0000025-1575043694:965523..965617Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1491911889:966550..966719TCONS_00003135-exon-sc0000025-1491911889:966550..966719Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1510915933:966550..966719TCONS_00003135-exon-sc0000025-1510915933:966550..966719Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1575043694:966550..966719TCONS_00003135-exon-sc0000025-1575043694:966550..966719Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1491911889:967029..967068TCONS_00003135-exon-sc0000025-1491911889:967029..967068Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1510915933:967029..967068TCONS_00003135-exon-sc0000025-1510915933:967029..967068Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1575043694:967029..967068TCONS_00003135-exon-sc0000025-1575043694:967029..967068Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1491911889:967217..967320TCONS_00003135-exon-sc0000025-1491911889:967217..967320Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1510915933:967217..967320TCONS_00003135-exon-sc0000025-1510915933:967217..967320Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1575043694:967217..967320TCONS_00003135-exon-sc0000025-1575043694:967217..967320Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1491911889:967785..967851TCONS_00003135-exon-sc0000025-1491911889:967785..967851Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1510915933:967785..967851TCONS_00003135-exon-sc0000025-1510915933:967785..967851Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1575043694:967785..967851TCONS_00003135-exon-sc0000025-1575043694:967785..967851Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1491911889:967995..968114TCONS_00003135-exon-sc0000025-1491911889:967995..968114Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1510915933:967995..968114TCONS_00003135-exon-sc0000025-1510915933:967995..968114Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1575043694:967995..968114TCONS_00003135-exon-sc0000025-1575043694:967995..968114Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1491911889:968389..969634TCONS_00003135-exon-sc0000025-1491911889:968389..969634Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1510915933:968389..969634TCONS_00003135-exon-sc0000025-1510915933:968389..969634Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1575043694:968389..969634TCONS_00003135-exon-sc0000025-1575043694:968389..969634Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1491911889:969998..970257TCONS_00003135-exon-sc0000025-1491911889:969998..970257Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1510915933:969998..970257TCONS_00003135-exon-sc0000025-1510915933:969998..970257Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1575043694:969998..970257TCONS_00003135-exon-sc0000025-1575043694:969998..970257Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1491911889:970752..970859TCONS_00003135-exon-sc0000025-1491911889:970752..970859Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1510915933:970752..970859TCONS_00003135-exon-sc0000025-1510915933:970752..970859Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1575043694:970752..970859TCONS_00003135-exon-sc0000025-1575043694:970752..970859Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1491911889:971737..971994TCONS_00003135-exon-sc0000025-1491911889:971737..971994Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1510915933:971737..971994TCONS_00003135-exon-sc0000025-1510915933:971737..971994Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1575043694:971737..971994TCONS_00003135-exon-sc0000025-1575043694:971737..971994Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1491911889:972388..972865TCONS_00003135-exon-sc0000025-1491911889:972388..972865Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1510915933:972388..972865TCONS_00003135-exon-sc0000025-1510915933:972388..972865Clytia hemisphaericaexon
TCONS_00003135-exon-sc0000025-1575043694:972388..972865TCONS_00003135-exon-sc0000025-1575043694:972388..972865Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:961699..972865 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.50136e-09	9.55634e-07	1.59193e-06	4.33742e-07	3.11974	1.70195	2.39117	2.84198	1.60734	1.68656	1.16301	0.993947	1.45615	1.87152	0	2.14717e-09	1.71465e-08	1.2088e-09	6.7698e-09	1.62065e-07	2.80149e-08	0.00136651	3.22013e-08	1.44407e-09	1.64269	1.53449	2.48367e-05	0	1.36269e-08	0.000361865
Blast
[Close]
BLAST of TCONS_00003135 vs. Swiss-Prot (Human)
Match: ACINU (Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens GN=ACIN1 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 4.191e-23
Identity = 44/83 (53.01%), Postives = 58/83 (69.88%), Query Frame = 2 
Query: 2654 VSVYLMIINLVRPFTNNQLKALISKTGTIEDNGFWINSIKSHCYVKLSTIEEATNTRKALHNLKWPSGNPKLMKVDFAVMNEM 2902
            +S  + I NLVRPFT  QLK L+ +TGT+ +  FWI+ IKSHC+V  ST+EEA  TR ALH +KWP  NPK +  D+A  +E+
Sbjct: 1010 ISNIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFLCADYAEQDEL 1092
The following BLAST results are available for this feature:
BLAST of TCONS_00003135 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACINU4.191e-2353.01Apoptotic chromatin condensation inducer in the nu... [more]
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