TCONS_00003138 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003138
Unique NameTCONS_00003138
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2056

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003138 ID=TCONS_00003138|Name=TCONS_00003138|organism=Clytia hemisphaerica|type=transcript|length=2056bp
GAGCAAATCAATAAACAAATCAATTACGTCAATATTTTTATCAAAATATT
TGACGTCAAATTATTCTTAAAGAACAACAGTGTTTGAAAAAAAAATTGTC
ATTTCTATATTGTAAGTAGTCTAGGCAAGCCAGACATTTTTGGTAGAAGA
AATTTTATATTATGACTTTGGATAACGACATTATGGGTTCAATGGATGTT
TCAATAAAGATGGTGTCAAAGCATGATTTGGATTTTAATGAACGACATCA
AAATTCAGTTCCAAAATACGAAGAAGCTATTATAAAGAAAGGTCAAATAG
AAGCCGTTATCGAGGAAGCTTTTGAACCGAGAAATACTGGTGACAAAGAA
TCAACTAAAGATCCAATAGATACTGTTCAGTACGCTTTGAACGTGGCCAG
CAAGGTGAATCAACAAATTCTAGAACTTGGAACTGTGAAAGAAAAACGTG
AAAAACTAGTCCAAAAATTTGAAGAGGCGCTTCAGAAGAAAAAAGAGGAG
AATATTTTTGTGAAGCCGGTTGATAAGTTGAAAATAACCGCTGGGAAACC
GATGGATTTTGACGATGCTTTGGAAACGGAGATGAGGCAGAAGACGAAAG
ATTTTAACAACAAATTGGACAAAATAGAGGGCCAATGGACCAGAAAAATC
GAGATGCTTGAAAATAAAGCAAAAGAAGCACTAGACAAGAAGTTTTATGT
CGAACAAAATCTAAATACTGTGCTTTTAAAAATGAACTTGATGGAATTTG
AATCATCAAAAAATCAAGAAATTATCACAGCTTTAAGAGTAGAAAATGCA
AAATTAAAGACTGAAAATGATGATTTGAAACTCAAATTGGTTGTCAAATC
TCAAGAAAAAGAAGCACAAGATGTTACGAAAGCTAAGCATGAAACGGCTG
AAGTAATTGAAAGCAGTGGCTCTGGTAGCGACCAGATTGAGACTAGATTA
CCAAATCAATCATTATTGGACACCGCCAAAGCTGAACAAAAAACAGTTCC
GAATACTAATGTTCGATTTTCAATTCCAGATGAGTCGCCTTGCAAACGAT
TGGAAACAAGAGTTGGACGCCCAATGAAAAAAGTGGACCAAAAAGATAGA
GAAGCAAATGCATGGAAGAGGGATTCTTCAAATAAAACTGCCTCTAAGCC
AAAAGCAGACAAAAAGGGAAGAAAGCAGACCAACGCCAAATTGCAAATTG
ATAAATACAAAAAGATAAGCAACAAGACTGTCGACCAATCGAAATACGGA
CAAAACAAGCCAAAACAAGAAGGAACAAAAGTGATTTCGCAAAAAGAAGT
TAGAACAGCATCAGCAACTTTAAACAAAAAGTGTGATCTAAAATGCAAAA
ACACTACGTTCAAGGAGTCGGCAGTTTTACAAAGAGACGTCAGATTCAGT
GAACCAAAGAAATCTCAAGATTTTCGCAACGGATCTATGACACTTACCAG
CATCTTCATAAAAGACGGAATAAAACAAATTAAGACACAGGTCCCAACTG
TTAAGAAACCACAAGTTCAATGTGATGCAAAACCAGCCAATAAAACCATC
CAAGAACAATCTAAACAAGCCAAGAAACTAGCTGTCTTCAAATACAACAA
AAATCCGAAGAAGCCGATAAAAAAATTCGCCAACGGACACCATTTTGAAT
CCAAGGAATGCTGGGATTAATTCTTAATTCAGTTTTTTAATTTTTAATCT
TTTTTTCTCTTCTATTTCTATTTCTTTCTTTTATAATAATCATTTTTTAA
ATAAATTCCAAAAACATAATCTTTATTTCAAATGTTTAATGATTGATCTA
AATTAGCGGGACCTGGGTGAATCCTTTTCAACTGATGGTGAAAAGGAAGG
ATAGTATCTTACTCCTCATACAAAATTACACAAATATTTATTGATCGATT
GTCGTTTGACGCTATGGAATTCTCAAAAATCATTTACACGAGAATGGTGT
AAAGCTAACTTATCAAACCTTTACATGAACGTACATACTTGCACTCATTT
GCGAATCTCCTGGCTTGTGATTATCACATTTTGCCCTTAGTAAGTTTTTA
TCTATT
Run BLAST on NCBI

protein sequence of TCONS_00003138-protein

>TCONS_00003138-protein ID=TCONS_00003138-protein|Name=TCONS_00003138-protein|organism=Clytia hemisphaerica|type=polypeptide|length=502bp
MTLDNDIMGSMDVSIKMVSKHDLDFNERHQNSVPKYEEAIIKKGQIEAVI
EEAFEPRNTGDKESTKDPIDTVQYALNVASKVNQQILELGTVKEKREKLV
QKFEEALQKKKEENIFVKPVDKLKITAGKPMDFDDALETEMRQKTKDFNN
KLDKIEGQWTRKIEMLENKAKEALDKKFYVEQNLNTVLLKMNLMEFESSK
NQEIITALRVENAKLKTENDDLKLKLVVKSQEKEAQDVTKAKHETAEVIE
SSGSGSDQIETRLPNQSLLDTAKAEQKTVPNTNVRFSIPDESPCKRLETR
VGRPMKKVDQKDREANAWKRDSSNKTASKPKADKKGRKQTNAKLQIDKYK
KISNKTVDQSKYGQNKPKQEGTKVISQKEVRTASATLNKKCDLKCKNTTF
KESAVLQRDVRFSEPKKSQDFRNGSMTLTSIFIKDGIKQIKTQVPTVKKP
QVQCDAKPANKTIQEQSKQAKKLAVFKYNKNPKKPIKKFANGHHFESKEC
WD
Run BLAST on NCBI

transcript from alignment at sc0000025:987407..990916+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003138 ID=TCONS_00003138|Name=TCONS_00003138|organism=Clytia hemisphaerica|type=transcript|length=3510bp|location=Sequence derived from alignment at sc0000025:987407..990916+ (Clytia hemisphaerica)
GAGCAAATCAATAAACAAATCAATTACGTCAATATTTTTATCAAAATATT
TGACGTCAAATTATTCTTAAAGAACAACAGTGTTTGAAAAAAAAATTGTC
ATTTCTATATTGTAAGTAGTCTAGGCAAGCCAGACATTTTTGGTAGAAGA
AATTTTATATTATGACTTTGGATAACGACATTATGGGTTCAATGGATGTT
TCAATAAAGATGGTGTCAAAGCATGATTTGGATTTTAATGAACGACATCA
AAATTCAGTTCCAAAATACGAAGAAGCTATTATAAAGAAAGGTCAAATAG
AAGCCGTTATCGAGGAAGCTTTTGAACCGAGAAATACTGGTGACAAAGAA
TCAACTAAAGATCCAATAGATACTGTTCAGTACGCTTTGAACGTGGCCAG
CAAGGTGAATCAACAAATTCTAGAACTTGGAACTGTGAAAGAAAAACGTG
AAAAACTAGTCCAAAAATTTGAAGAGGCGCTTCAGAAGAAAAAAGAGGAG
AATATTTTTGTGAAGCCGGTTGATAAGTTGAAAATAACCGCTGGGAAACC
GATGGATTTTGACGATGCTTTGGAAACGGAGATGAGGCAGAAGACGAAAG
ATTTTAACAACAAATTGGACAAAATAGAGGGCCAATGGACCAGAAAAATC
GAGATGCTTGAAAATAAAGCAAAAGAAGCACTAGACAAGAAGTTTTATGT
CGAACAAAATCTAAATACTGTGCTTTTAAAAATGAACTTGATGGAATTTG
AATCATCAAAAAATCAAGAAATTATCACAGCTTTAAGAGTAGAAAATGCA
AAATTAAAGACTGAAAATGATGATTTGAAACTCAAATTGGTTGTCAAATC
TCAAGAAAAAGAAGCACAAGATGTTACGAAAGCTAAGCATGAAACGGCTG
AAGTAATTGAAAGCAGTGGCTCTGGTAGCGACCAGATTGAGACTAGATTA
CCAAATCAATCATTATTGGACACCGCCAAAGCTGAACAAAAAACAGTTCC
GAATACTAATGTTCGATTTTCAATTCCAGATGAGTCGCCTTGCAAACGAT
TGGAAACAAGAGTTGGACGCCCAATGAAAAAAGTGGACCAAAAAGATAGA
GAAGCAAATGCATGGAAGAGGGATTCTTCAAATAAAACTGCCTCTAAGCC
AAAAGCAGACAAAAAGGTACAAGAATGAAAAATTTCATCGAATTGTTTTA
TTTAATCTTTCAATAATTCTATACTCCCTTGAAGACCAGGAAAAAATAGC
ATTAGAAAGGTTATGCATGGATAAGTTTAAGTAATATTACTTTCTCTTTG
ATCTTTTAACATGACAACACGCGAGGTGAAACTCGAGGTGGTCCAAAAAA
AACAAAAAAAAACGCCAATTTTGGTGCAATTTGGCAGAATTTATTTTGGC
GATTTAATAAAATTTCTAAATTTAGCGAGAATTAATTTTGGCGAACGACA
CTTTTTTGTTCAATATTTTAGCTGAAAACGAGGGGGAAAAAGGGTTTTTA
GGAGAAATAGAGAGTAAATTGAAAGAAAATTAAATTTGGCGAGAATTTAT
TTTGGCGAATGAAATATGAATTTCTTTCCGCCAAAATTTCTTCCCTTATG
GTATTAGCCAAAAGCTTTTTGGGTTTTGGGATTCTGCAGGAATGTGGATC
TCTACTAGGAGCCCTTTTCAGCTTGTACATTATTCAATCTCATAAAAAAA
GTTTTCCTCCAATCTTAGGGAAGAAAGCAGACCAACGCCAAATTGCAAAT
TGATAAATACAAAAAGATAAGCAACAAGACTGTCGACCAATCGAAATACG
GACAAAACAAGCCAAAACAAGAAGGAACAAAAGTGATTTCGCAAAAAGAA
GTTAGAACAGCATCAGCAACTTTAAACAAAAAGTGTGATCTAAAATGCAA
AAACACTACGTTCAAGGTAAGCCTTTTGGAGCGGTTTCTACTGTATTTCT
ATTTGGTTGCAGGATGCTCTTGAGGCCCATTTTCGCAACTATAAATGCTT
TTAGCGAGCACCCCGTCAGCACCTTGGACTGACTGCCTAATttccctcac
atggtatgggttcacccgggcgaaggttcattcacttgacTAGTGAACTG
CTGCGattgggaatcgaacctcagttcGTGCAGCAACCAAGATCAATGGC
CACTATACCAAAGTGCCTAACAGCAGTAAACCACCGGAAATGTCAATTAC
CTCTAATGAATCAACCCCACTTTCAAACCAATGAAAAAGGCTTCAAGACA
TCTGAGTCCGAATCAGTAACGTCtcaaaatttaaaggttttgtttttttt
ataagagtgatatcgtttgcttgtactcatcaattttaattcacaagctt
tttcatattgaattgacacgaatgtgttaacatttgtttgcttatataag
cataatataacaataggcagacactgtcctgatatgaaatatgtgcctga
tatgaaGCGGGAactattatataaaaataaagcctttaacccttttttat
tgatttcaaGGAGTCGGCAGTTTTACAAAGAGACGTCAGATTCAGTGAAC
CAAAGAAATCTCAAGATTTTCGCAACGGATCTATGACACTTACCAGCATC
TTCATAAAAGACGGAATAAAACAAATTAAGACACAGGTCCCAACTGTTAA
GAAGTAAGTAAAATTTCACATAGGTTTACACTTTCACAATTATTGCAATT
TTAGACTCTTTTCACCAAATTTTCTGCAAAGTAGGAAAATAAAAACCTCT
TTTTATAAATTTTGTTCCATAAAATGAATTGTTTTTTTGTAGAATTTGCC
AGTCTAAAAAATTAAACTCTTCTACTATCTTTATATTTGTGATAATTCAA
AATAATCAACTATCTATCTCCATCGAAAAACCCTCAAAAAAGCTTTGTTC
CCGTTCGAGTTCAAATTAGTGAGATTCGACGGTGAATAATTCTTTTTTTT
TGCGTTTTCAGACCACAAGTTCAATGTGATGCAAAACCAGCCAATAAAAC
CATCCAAGAACAATCTAAACAAGCCAAGAAACTAGCTGTCTTCAAATACA
ACAAAAATCCGAAGAAGCCGATAAAAAAATTCGCCAACGGACACCATTTT
GAATCCAAGGAATGCTGGGATTAATTCTTAATTCAGTTTTTTAATTTTTA
ATCTTTTTTTCTCTTCTATTTCTATTTCTTTCTTTTATAATAATCATTTT
TTAAATAAATTCCAAAAACATAATCTTTATTTCAAATGTTTAATGATTGA
TCTAAATTAGCGGGACCTGGGTGAATCCTTTTCAACTGATGGTGAAAAGG
AAGGATAGTATCTTACTCCTCATACAAAATTACACAAATATTTATTGATC
GATTGTCGTTTGACGCTATGGAATTCTCAAAAATCATTTACACGAGAATG
GTGTAAAGCTAACTTATCAAACCTTTACATGAACGTACATACTTGCACTC
ATTTGCGAATCTCCTGGCTTGTGATTATCACATTTTGCCCTTAGTAAGTT
TTTATCTATT

Coding sequence (CDS) from alignment at sc0000025:987407..990916+

>TCONS_00003138 ID=TCONS_00003138|Name=TCONS_00003138|organism=Clytia hemisphaerica|type=CDS|length=6036bp|location=Sequence derived from alignment at sc0000025:987407..990916+ (Clytia hemisphaerica)
ATGACTTTGGATAACGACATTATGGGTTCAATGGATGTTTCAATAAAGAT
GGTGTCAAAGCATGATTTGGATTTTAATGAACGACATCAAAATTCAGTTC
CAAAATACGAAGAAGCTATTATAAAGAAAGGTCAAATAGAAGCCGTTATC
GAGGAAGCTTTTGAACCGAGAAATACTGGTGACAAAGAATCAACTAAAGA
TCCAATAGATACTGTTCAGTACGCTTTGAACGTGGCCAGCAAGGTGAATC
AACAAATTCTAGAACTTGGAACTGTGAAAGAAAAACGTGAAAAACTAGTC
CAAAAATTTGAAGAGGCGCTTCAGAAGAAAAAAGAGGAGAATATTTTTGT
GAAGCCGGTTGATAAGTTGAAAATAACCGCTGGGAAACCGATGGATTTTG
ACGATGCTTTGGAAACGGAGATGAGGCAGAAGACGAAAGATTTTAACAAC
AAATTGGACAAAATAGAGGGCCAATGGACCAGAAAAATCGAGATGCTTGA
AAATAAAGCAAAAGAAGCACTAGACAAGAAGTTTTATGTCGAACAAAATC
TAAATACTGTGCTTTTAAAAATGAACTTGATGGAATTTGAATCATCAAAA
AATCAAGAAATTATCACAGCTTTAAGAGTAGAAAATGCAAAATTAAAGAC
TGAAAATGATGATTTGAAACTCAAATTGGTTGTCAAATCTCAAGAAAAAG
AAGCACAAGATGTTACGAAAGCTAAGCATGAAACGGCTGAAGTAATTGAA
AGCAGTGGCTCTGGTAGCGACCAGATTGAGACTAGATTACCAAATCAATC
ATTATTGGACACCGCCAAAGCTGAACAAAAAACAGTTCCGAATACTAATG
TTCGATTTTCAATTCCAGATGAGTCGCCTTGCAAACGATTGGAAACAAGA
GTTGGACGCCCAATGAAAAAAGTGGACCAAAAAGATAGAGAAGCAAATGC
ATGGAAGAGGGATTCTTCAAATAAAACTGCCTCTAAGCCAAAAGCAGACA
AAAAGGGAAGAAAGCAGACCAACGCCAAATTGCAAATTGATAAATACAAA
AAGATAAGCAACAAGACTGTCGACCAATCGAAATACGGACAAAACAAGCC
AAAACAAGAAGGAACAAAAGTGATTTCGCAAAAAGAAGTTAGAACAGCAT
CAGCAACTTTAAACAAAAAGTGTGATCTAAAATGCAAAAACACTACGTTC
AAGGAGTCGGCAGTTTTACAAAGAGACGTCAGATTCAGTGAACCAAAGAA
ATCTCAAGATTTTCGCAACGGATCTATGACACTTACCAGCATCTTCATAA
AAGACGGAATAAAACAAATTAAGACACAGGTCCCAACTGTTAAGAAACCA
CAAGTTCAATGTGATGCAAAACCAGCCAATAAAACCATCCAAGAACAATC
TAAACAAGCCAAGAAACTAGCTGTCTTCAAATACAACAAAAATCCGAAGA
AGCCGATAAAAAAATTCGCCAACGGACACCATTTTGAATCCAAGGAATGC
TGGGATTAAATGACTTTGGATAACGACATTATGGGTTCAATGGATGTTTC
AATAAAGATGGTGTCAAAGCATGATTTGGATTTTAATGAACGACATCAAA
ATTCAGTTCCAAAATACGAAGAAGCTATTATAAAGAAAGGTCAAATAGAA
GCCGTTATCGAGGAAGCTTTTGAACCGAGAAATACTGGTGACAAAGAATC
AACTAAAGATCCAATAGATACTGTTCAGTACGCTTTGAACGTGGCCAGCA
AGGTGAATCAACAAATTCTAGAACTTGGAACTGTGAAAGAAAAACGTGAA
AAACTAGTCCAAAAATTTGAAGAGGCGCTTCAGAAGAAAAAAGAGGAGAA
TATTTTTGTGAAGCCGGTTGATAAGTTGAAAATAACCGCTGGGAAACCGA
TGGATTTTGACGATGCTTTGGAAACGGAGATGAGGCAGAAGACGAAAGAT
TTTAACAACAAATTGGACAAAATAGAGGGCCAATGGACCAGAAAAATCGA
GATGCTTGAAAATAAAGCAAAAGAAGCACTAGACAAGAAGTTTTATGTCG
AACAAAATCTAAATACTGTGCTTTTAAAAATGAACTTGATGGAATTTGAA
TCATCAAAAAATCAAGAAATTATCACAGCTTTAAGAGTAGAAAATGCAAA
ATTAAAGACTGAAAATGATGATTTGAAACTCAAATTGGTTGTCAAATCTC
AAGAAAAAGAAGCACAAGATGTTACGAAAGCTAAGCATGAAACGGCTGAA
GTAATTGAAAGCAGTGGCTCTGGTAGCGACCAGATTGAGACTAGATTACC
AAATCAATCATTATTGGACACCGCCAAAGCTGAACAAAAAACAGTTCCGA
ATACTAATGTTCGATTTTCAATTCCAGATGAGTCGCCTTGCAAACGATTG
GAAACAAGAGTTGGACGCCCAATGAAAAAAGTGGACCAAAAAGATAGAGA
AGCAAATGCATGGAAGAGGGATTCTTCAAATAAAACTGCCTCTAAGCCAA
AAGCAGACAAAAAGGGAAGAAAGCAGACCAACGCCAAATTGCAAATTGAT
AAATACAAAAAGATAAGCAACAAGACTGTCGACCAATCGAAATACGGACA
AAACAAGCCAAAACAAGAAGGAACAAAAGTGATTTCGCAAAAAGAAGTTA
GAACAGCATCAGCAACTTTAAACAAAAAGTGTGATCTAAAATGCAAAAAC
ACTACGTTCAAGGAGTCGGCAGTTTTACAAAGAGACGTCAGATTCAGTGA
ACCAAAGAAATCTCAAGATTTTCGCAACGGATCTATGACACTTACCAGCA
TCTTCATAAAAGACGGAATAAAACAAATTAAGACACAGGTCCCAACTGTT
AAGAAACCACAAGTTCAATGTGATGCAAAACCAGCCAATAAAACCATCCA
AGAACAATCTAAACAAGCCAAGAAACTAGCTGTCTTCAAATACAACAAAA
ATCCGAAGAAGCCGATAAAAAAATTCGCCAACGGACACCATTTTGAATCC
AAGGAATGCTGGGATTAAATGACTTTGGATAACGACATTATGGGTTCAAT
GGATGTTTCAATAAAGATGGTGTCAAAGCATGATTTGGATTTTAATGAAC
GACATCAAAATTCAGTTCCAAAATACGAAGAAGCTATTATAAAGAAAGGT
CAAATAGAAGCCGTTATCGAGGAAGCTTTTGAACCGAGAAATACTGGTGA
CAAAGAATCAACTAAAGATCCAATAGATACTGTTCAGTACGCTTTGAACG
TGGCCAGCAAGGTGAATCAACAAATTCTAGAACTTGGAACTGTGAAAGAA
AAACGTGAAAAACTAGTCCAAAAATTTGAAGAGGCGCTTCAGAAGAAAAA
AGAGGAGAATATTTTTGTGAAGCCGGTTGATAAGTTGAAAATAACCGCTG
GGAAACCGATGGATTTTGACGATGCTTTGGAAACGGAGATGAGGCAGAAG
ACGAAAGATTTTAACAACAAATTGGACAAAATAGAGGGCCAATGGACCAG
AAAAATCGAGATGCTTGAAAATAAAGCAAAAGAAGCACTAGACAAGAAGT
TTTATGTCGAACAAAATCTAAATACTGTGCTTTTAAAAATGAACTTGATG
GAATTTGAATCATCAAAAAATCAAGAAATTATCACAGCTTTAAGAGTAGA
AAATGCAAAATTAAAGACTGAAAATGATGATTTGAAACTCAAATTGGTTG
TCAAATCTCAAGAAAAAGAAGCACAAGATGTTACGAAAGCTAAGCATGAA
ACGGCTGAAGTAATTGAAAGCAGTGGCTCTGGTAGCGACCAGATTGAGAC
TAGATTACCAAATCAATCATTATTGGACACCGCCAAAGCTGAACAAAAAA
CAGTTCCGAATACTAATGTTCGATTTTCAATTCCAGATGAGTCGCCTTGC
AAACGATTGGAAACAAGAGTTGGACGCCCAATGAAAAAAGTGGACCAAAA
AGATAGAGAAGCAAATGCATGGAAGAGGGATTCTTCAAATAAAACTGCCT
CTAAGCCAAAAGCAGACAAAAAGGGAAGAAAGCAGACCAACGCCAAATTG
CAAATTGATAAATACAAAAAGATAAGCAACAAGACTGTCGACCAATCGAA
ATACGGACAAAACAAGCCAAAACAAGAAGGAACAAAAGTGATTTCGCAAA
AAGAAGTTAGAACAGCATCAGCAACTTTAAACAAAAAGTGTGATCTAAAA
TGCAAAAACACTACGTTCAAGGAGTCGGCAGTTTTACAAAGAGACGTCAG
ATTCAGTGAACCAAAGAAATCTCAAGATTTTCGCAACGGATCTATGACAC
TTACCAGCATCTTCATAAAAGACGGAATAAAACAAATTAAGACACAGGTC
CCAACTGTTAAGAAACCACAAGTTCAATGTGATGCAAAACCAGCCAATAA
AACCATCCAAGAACAATCTAAACAAGCCAAGAAACTAGCTGTCTTCAAAT
ACAACAAAAATCCGAAGAAGCCGATAAAAAAATTCGCCAACGGACACCAT
TTTGAATCCAAGGAATGCTGGGATTAAATGACTTTGGATAACGACATTAT
GGGTTCAATGGATGTTTCAATAAAGATGGTGTCAAAGCATGATTTGGATT
TTAATGAACGACATCAAAATTCAGTTCCAAAATACGAAGAAGCTATTATA
AAGAAAGGTCAAATAGAAGCCGTTATCGAGGAAGCTTTTGAACCGAGAAA
TACTGGTGACAAAGAATCAACTAAAGATCCAATAGATACTGTTCAGTACG
CTTTGAACGTGGCCAGCAAGGTGAATCAACAAATTCTAGAACTTGGAACT
GTGAAAGAAAAACGTGAAAAACTAGTCCAAAAATTTGAAGAGGCGCTTCA
GAAGAAAAAAGAGGAGAATATTTTTGTGAAGCCGGTTGATAAGTTGAAAA
TAACCGCTGGGAAACCGATGGATTTTGACGATGCTTTGGAAACGGAGATG
AGGCAGAAGACGAAAGATTTTAACAACAAATTGGACAAAATAGAGGGCCA
ATGGACCAGAAAAATCGAGATGCTTGAAAATAAAGCAAAAGAAGCACTAG
ACAAGAAGTTTTATGTCGAACAAAATCTAAATACTGTGCTTTTAAAAATG
AACTTGATGGAATTTGAATCATCAAAAAATCAAGAAATTATCACAGCTTT
AAGAGTAGAAAATGCAAAATTAAAGACTGAAAATGATGATTTGAAACTCA
AATTGGTTGTCAAATCTCAAGAAAAAGAAGCACAAGATGTTACGAAAGCT
AAGCATGAAACGGCTGAAGTAATTGAAAGCAGTGGCTCTGGTAGCGACCA
GATTGAGACTAGATTACCAAATCAATCATTATTGGACACCGCCAAAGCTG
AACAAAAAACAGTTCCGAATACTAATGTTCGATTTTCAATTCCAGATGAG
TCGCCTTGCAAACGATTGGAAACAAGAGTTGGACGCCCAATGAAAAAAGT
GGACCAAAAAGATAGAGAAGCAAATGCATGGAAGAGGGATTCTTCAAATA
AAACTGCCTCTAAGCCAAAAGCAGACAAAAAGGGAAGAAAGCAGACCAAC
GCCAAATTGCAAATTGATAAATACAAAAAGATAAGCAACAAGACTGTCGA
CCAATCGAAATACGGACAAAACAAGCCAAAACAAGAAGGAACAAAAGTGA
TTTCGCAAAAAGAAGTTAGAACAGCATCAGCAACTTTAAACAAAAAGTGT
GATCTAAAATGCAAAAACACTACGTTCAAGGAGTCGGCAGTTTTACAAAG
AGACGTCAGATTCAGTGAACCAAAGAAATCTCAAGATTTTCGCAACGGAT
CTATGACACTTACCAGCATCTTCATAAAAGACGGAATAAAACAAATTAAG
ACACAGGTCCCAACTGTTAAGAAACCACAAGTTCAATGTGATGCAAAACC
AGCCAATAAAACCATCCAAGAACAATCTAAACAAGCCAAGAAACTAGCTG
TCTTCAAATACAACAAAAATCCGAAGAAGCCGATAAAAAAATTCGCCAAC
GGACACCATTTTGAATCCAAGGAATGCTGGGATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001739XLOC_001739Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003138-exon-sc0000025-1491911889:987407..988572TCONS_00003138-exon-sc0000025-1491911889:987407..988572Clytia hemisphaericaexon
TCONS_00003138-exon-sc0000025-1510915933:987407..988572TCONS_00003138-exon-sc0000025-1510915933:987407..988572Clytia hemisphaericaexon
TCONS_00003138-exon-sc0000025-1575043694:987407..988572TCONS_00003138-exon-sc0000025-1575043694:987407..988572Clytia hemisphaericaexon
TCONS_00003138-exon-sc0000025-1491911889:989125..989322TCONS_00003138-exon-sc0000025-1491911889:989125..989322Clytia hemisphaericaexon
TCONS_00003138-exon-sc0000025-1510915933:989125..989322TCONS_00003138-exon-sc0000025-1510915933:989125..989322Clytia hemisphaericaexon
TCONS_00003138-exon-sc0000025-1575043694:989125..989322TCONS_00003138-exon-sc0000025-1575043694:989125..989322Clytia hemisphaericaexon
TCONS_00003138-exon-sc0000025-1491911889:989917..990059TCONS_00003138-exon-sc0000025-1491911889:989917..990059Clytia hemisphaericaexon
TCONS_00003138-exon-sc0000025-1510915933:989917..990059TCONS_00003138-exon-sc0000025-1510915933:989917..990059Clytia hemisphaericaexon
TCONS_00003138-exon-sc0000025-1575043694:989917..990059TCONS_00003138-exon-sc0000025-1575043694:989917..990059Clytia hemisphaericaexon
TCONS_00003138-exon-sc0000025-1491911889:990368..990916TCONS_00003138-exon-sc0000025-1491911889:990368..990916Clytia hemisphaericaexon
TCONS_00003138-exon-sc0000025-1510915933:990368..990916TCONS_00003138-exon-sc0000025-1510915933:990368..990916Clytia hemisphaericaexon
TCONS_00003138-exon-sc0000025-1575043694:990368..990916TCONS_00003138-exon-sc0000025-1575043694:990368..990916Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003138-proteinTCONS_00003138-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:987407..990916 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.083174	0.208598	0.624923	1.05186	0	0.0614078	0.0609789	0.0462389	0.019209	0.0801982	0	0.102559	0.122274	0.0709213	0.121196	0.0947	0.0288392	0.0718163	0.0204189	0	0.0590274	0.077653	0.0220239	0.0721164	0.0206231	0.128839	0	0.109157	0.0213197	0.0480391
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003138 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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