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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003216 ID=TCONS_00003216|Name=TCONS_00003216|organism=Clytia hemisphaerica|type=transcript|length=1394bp
CGCTGATTTCAAAAGTGTATTCAAATCTTTCATATCTTTTTGGACCAAAA
GTTACAGCCCAAAAAAAAAGGTCCAATTGGtgataaattgataaaaatgg
tCGAAATGGACATTTTTCAAGGAGCTAtaatctatattataatacgctca
AATCcgaactctcccattctcgtATGAAGCTAGCGACTATTTTAGCTAGC
GACTTTTAAACATCCAGCAATTATTTTTCGCACCTTTTCTGTATTTTCAA
TTGGGCAATTTTAGCCTTAAAATGAAAGTCGTGAAACtataatctttctt
ttttttcataatcttcttttttgaacatttttaggaGCGTTTCGAAATTG
CATACCCATTAtatgtttctttttcattttgaaatatctaatatCTAATA
TCTATTCGCTAGATGacaataaagtaaaacagggccaaatttggaggttc
ttggcaCTTGTTggccaaaaatggtcaaaaaatggtcaaaatcttaaaaa
agtggattagTTTAAATTCTtgcattttatactttttgtcttaaaatctc
gctggaaaggctcacttttgaaatttattttgcttgATCATGAGGCACAA
TCCTATTCCTAAGAGTTAGAccaaaatgacgatttctaactcaaactggg
cattacaggagggttTCGCCCTCTTATATAGCCAATATTAATATCAATTA
TATGTCCAATATACTCGACACTGGTACTTAAAGGAAATAGAATATACAAG
AAACCGTTTTTACCTATTCCTCTAAGAAGCGAAAAATAcatttaatttct
caaaataacTTAAGTCCCCGGACAAAGTCCTTTTTTAAGGCGCTGAAAGA
TATACCGTCGTTTTGTTTAAAATAAGACCCCCATTTTTCTAAGGGAAAAA
GACCAGGACCTCGGGTAGTTGAAAATAAGCTTCGGAAATTTAGGCAGTTC
CGTGAGTAAACACAATATTTTCCGTACTTTTAGAAACAAAAGCTTTCCAA
AATGATAAGAATgaaatcttagtgcggaaatgggatgaaaatatgaaaat
attagGTTCTCATTCAATCGccattctcgcccgaacttagAATTCTGAAA
ACCGTTGAAATgcacaaaaatctcaaaatattttaaccTTGATTGTAGTA
TCAACACCTTTGTTTTAAAGAATGAACCTGATGCTTTACATTTAGTGTTG
TTTTAAAACCATCCCTAAATAAAAAGAGGTTTAACTTGGCTAAACAAGTT
TAAACCAGAATTACCTTAAAGATTATTTCTCTGTAGGTATTCCGAATCGA
AAACCTGAAatatatcttcaaaaaaattccaaCGTTCTAACTTCACATCA
ATAAACATCGCAGAACGAAACAAATAATCTAACCAACAATTTCC Run BLAST on NCBI transcript from alignment at sc0000025:119793..121186 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003216 ID=TCONS_00003216|Name=TCONS_00003216|organism=Clytia hemisphaerica|type=transcript|length=1394bp|location=Sequence derived from alignment at sc0000025:119793..121186 (Clytia hemisphaerica)
GGAAATTGTTGGTTAGATTATTTGTTTCGTTCTGCGATGTTTATTGATGT
GAAGTTAGAACGttggaatttttttgaagatatatTTCAGGTTTTCGATT
CGGAATACCTACAGAGAAATAATCTTTAAGGTAATTCTGGTTTAAACTTG
TTTAGCCAAGTTAAACCTCTTTTTATTTAGGGATGGTTTTAAAACAACAC
TAAATGTAAAGCATCAGGTTCATTCTTTAAAACAAAGGTGTTGATACTAC
AATCAAggttaaaatattttgagatttttgtgcATTTCAACGGTTTTCAG
AATTctaagttcgggcgagaatggCGATTGAATGAGAACctaatattttc
atattttcatcccatttccgcactaagatttcATTCTTATCATTTTGGAA
AGCTTTTGTTTCTAAAAGTACGGAAAATATTGTGTTTACTCACGGAACTG
CCTAAATTTCCGAAGCTTATTTTCAACTACCCGAGGTCCTGGTCTTTTTC
CCTTAGAAAAATGGGGGTCTTATTTTAAACAAAACGACGGTATATCTTTC
AGCGCCTTAAAAAAGGACTTTGTCCGGGGACTTAAgttattttgagaaat
taaatgTATTTTTCGCTTCTTAGAGGAATAGGTAAAAACGGTTTCTTGTA
TATTCTATTTCCTTTAAGTACCAGTGTCGAGTATATTGGACATATAATTG
ATATTAATATTGGCTATATAAGAGGGCGAaaccctcctgtaatgcccagt
ttgagttagaaatcgtcattttggTCTAACTCTTAGGAATAGGATTGTGC
CTCATGATcaagcaaaataaatttcaaaagtgagcctttccagcgagatt
ttaagacaaaaagtataaaatgcaAGAATTTAAActaatccactttttta
agattttgaccattttttgaccatttttggccAACAAGtgccaagaacct
ccaaatttggccctgttttactttattgtCATCTAGCGAATAGATATTAG
atattagatatttcaaaatgaaaaagaaacataTAATGGGTATGCAATTT
CGAAACGCtcctaaaaatgttcaaaaaagaagattatgaaaaaaaagaaa
gattataGTTTCACGACTTTCATTTTAAGGCTAAAATTGCCCAATTGAAA
ATACAGAAAAGGTGCGAAAAATAATTGCTGGATGTTTAAAAGTCGCTAGC
TAAAATAGTCGCTAGCTTCATacgagaatgggagagttcgGATTtgagcg
tattataatatagattaTAGCTCCTTGAAAAATGTCCATTTCGaccattt
ttatcaatttatcaCCAATTGGACCTTTTTTTTTGGGCTGTAACTTTTGG
TCCAAAAAGATATGAAAGATTTGAATACACTTTTGAAATCAGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003216-exon-sc0000025-1491911889:119793..121186 | TCONS_00003216-exon-sc0000025-1491911889:119793..121186 | Clytia hemisphaerica | exon |
| TCONS_00003216-exon-sc0000025-1510915933:119793..121186 | TCONS_00003216-exon-sc0000025-1510915933:119793..121186 | Clytia hemisphaerica | exon |
| TCONS_00003216-exon-sc0000025-1575043694:119793..121186 | TCONS_00003216-exon-sc0000025-1575043694:119793..121186 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025 | supercontig | sc0000025:119793..121186 . |
Blast
The following BLAST results are available for this feature:
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