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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003220 ID=TCONS_00003220|Name=TCONS_00003220|organism=Clytia hemisphaerica|type=transcript|length=1016bp
TGAAATGATGGTTTTTTAGAagcatttcattttcattgttttgatagtgg
aaaagaaaagatttgcaCTTAAAGGTGGTTAACAATTATATTGATGACAC
AGTGGATGGATTATAACGACTTGATATAAATATCAGTAGAGAAACTTGAA
CAAAACACACACCATTCTACATCAGTCAACATGAGGGAAAAGTGGAAGAA
GAAACGTATGAGACGCCTGAAGAGAAAACGCCGAAAGATGCGAGCCagat
ctaaataaataaatccacAATCAATCTACATTCTTTTTTGCAAACTATGG
TGAAAATTATTTGACACACAAATACCGACACTTAATCATCATTAAAAATA
CATTGTGAAGATGTACGACAAGAATTACTTTATCAACTCAATACCCTGAT
CAACGCACAAATCTAACTACCATACCATGAAACTATTATAAACTTTCAAA
TAACTGACCGAGGTACGGCATTGACAAACGCACGGTTTTTGTAACGCAGA
AGATTTTCATGAGCAATGCAGACTGGAAATTCTTTTTCACAAGGATTCGA
CCTACCACGAAAAGCAGAATACGAATCGAGACAACGTTAATAATTTCCAG
AGGATAGGAATACCTTTCACTGTATTTTAGCTTATTTAAAAACAGATTTG
ATGTGAGATGCGAGATATTTGTCACGAAGCACCGtggttattttgatttg
attgtttttgttttataaattcgtagggaaaacatttttaaattttttta
ttcatagtTTTGCTAAGAAATGAGGATTGATTAAAAATTTATATTGTtct
gtatttcaaaaaattagtgCAAGAATTAATTTTCTTAGATTCTAGGTAAC
AACATTGCCGTAGAATTTTCAGTTTGGCGATAATTGAATATTTTCCTTTT
GCTAATACAGTGGAGTGcatttaactcgaatgtctccttaacacACGAAC
AAGCTTAAGGGTCTctcttgaacaaatttgtgttcctcgcCTTGTTCGAA
TTATGAAGACTAAATT Run BLAST on NCBI transcript from alignment at sc0000025:223208..224223 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003220 ID=TCONS_00003220|Name=TCONS_00003220|organism=Clytia hemisphaerica|type=transcript|length=1016bp|location=Sequence derived from alignment at sc0000025:223208..224223 (Clytia hemisphaerica)
AATTTAGTCTTCATAATTCGAACAAGgcgaggaacacaaatttgttcaag
agAGACCCTTAAGCTTGTTCGTgtgttaaggagacattcgagttaaatgC
ACTCCACTGTATTAGCAAAAGGAAAATATTCAATTATCGCCAAACTGAAA
ATTCTACGGCAATGTTGTTACCTAGAATCTAAGAAAATTAATTCTTGcac
taattttttgaaatacagaACAATATAAATTTTTAATCAATCCTCATTTC
TTAGCAAAactatgaataaaaaaatttaaaaatgttttccctacgaattt
ataaaacaaaaacaatcaaatcaaaataaccaCGGTGCTTCGTGACAAAT
ATCTCGCATCTCACATCAAATCTGTTTTTAAATAAGCTAAAATACAGTGA
AAGGTATTCCTATCCTCTGGAAATTATTAACGTTGTCTCGATTCGTATTC
TGCTTTTCGTGGTAGGTCGAATCCTTGTGAAAAAGAATTTCCAGTCTGCA
TTGCTCATGAAAATCTTCTGCGTTACAAAAACCGTGCGTTTGTCAATGCC
GTACCTCGGTCAGTTATTTGAAAGTTTATAATAGTTTCATGGTATGGTAG
TTAGATTTGTGCGTTGATCAGGGTATTGAGTTGATAAAGTAATTCTTGTC
GTACATCTTCACAATGTATTTTTAATGATGATTAAGTGTCGGTATTTGTG
TGTCAAATAATTTTCACCATAGTTTGCAAAAAAGAATGTAGATTGATTgt
ggatttatttatttagatctGGCTCGCATCTTTCGGCGTTTTCTCTTCAG
GCGTCTCATACGTTTCTTCTTCCACTTTTCCCTCATGTTGACTGATGTAG
AATGGTGTGTGTTTTGTTCAAGTTTCTCTACTGATATTTATATCAAGTCG
TTATAATCCATCCACTGTGTCATCAATATAATTGTTAACCACCTTTAAGt
gcaaatcttttcttttccactatcaaaacaatgaaaatgaaatgctTCTA
AAAAACCATCATTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003220-exon-sc0000025-1491911889:223208..224223 | TCONS_00003220-exon-sc0000025-1491911889:223208..224223 | Clytia hemisphaerica | exon |
| TCONS_00003220-exon-sc0000025-1510915933:223208..224223 | TCONS_00003220-exon-sc0000025-1510915933:223208..224223 | Clytia hemisphaerica | exon |
| TCONS_00003220-exon-sc0000025-1575043694:223208..224223 | TCONS_00003220-exon-sc0000025-1575043694:223208..224223 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025 | supercontig | sc0000025:223208..224223 . |
Blast
The following BLAST results are available for this feature:
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