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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003230 ID=TCONS_00003230|Name=TCONS_00003230|organism=Clytia hemisphaerica|type=transcript|length=1087bp
TGTTGTTCTATTATTATTCTGTTATTATGTAATGTTAGATATAATACAGT
CAGGAGTACATTCAACATGAACCCGACTAGATGTATTTGACTGGAAAGGA
TAACGAAAAGATAAGACAGGAATTCCAATTTAATTCCTGTAATTCCAAGG
AAGTTAATCAAAAGATGGCTGATGCCTGCatccaaaaaacaacaaactta
CGTTGAAGCTTGGTTACTTCATTCATGCCAACATGACACAACTATTTGAT
TCATATTAAGATTTGCTCGAAGTATTAAGCGAACAATCAATAACTAACAA
CTTTTTTACCAGAAAAACAAGACAAATCAATATGAAATGGTTGGTGACAA
TGGTGTTTTGAATCATGCTGGCGGATGATTATGATCTTCATGCAAGTTTT
TACTACCATTGTTTACATTGATGTTATTCAACATTATTGTGCCATGCCAA
CATGATGCATGAAACACCGTGAAACTTATTGAACTTTTATATGAGTATGA
CAATCTGATTATCATATCAGCTTTGGGTAGAATTTTATCACAGATGTATA
TATGTATTGTATGAATTCCTTATTGATATACAGTTAAACAAAATTGATAT
atggcaaaaacaaaacagagcaAACGTTGGATTGGTCAGGTCACGCTATA
aaagtcaaactttcaagtCAATATCATTATCATATCCAATCAAACAGAAT
GGACAATCAAATTGAATTGCAAATTTCCTGAAGAAACTCTATATAGATTT
GATTGCACTTTTGGTATCATTTGAAGGTCTAAAGGTCCAGGCAAATGGAA
TGCTTAAAAACGACCAAAGATATTTGAGATATGTGACCCTCCATGTAGCG
ATTCGTTCGATTACCGATAACTTTACAGATTTTACAGCTAACAGTCATTG
TTTACCAATATCTAGATTGGTTTAGGCcacaatcacaaataacttgtgtt
tgtCGTCCNACCTCTATATATAAGGTAGTTGTAACAggaaaaatagtaca
aaaagcGTCCAATATCAGATTCAGACATAAAGAAAATGTACCTCGCAATT
ACGTAAATTAAACACAGTCAGATAAAAAATTCACAAG Run BLAST on NCBI transcript from alignment at sc0000025:574511..575597 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003230 ID=TCONS_00003230|Name=TCONS_00003230|organism=Clytia hemisphaerica|type=transcript|length=1087bp|location=Sequence derived from alignment at sc0000025:574511..575597 (Clytia hemisphaerica)
CTTGTGAATTTTTTATCTGACTGTGTTTAATTTACGTAATTGCGAGGTAC
ATTTTCTTTATGTCTGAATCTGATATTGGACgctttttgtactatttttc
cTGTTACAACTACCTTATATATAGAGGTNGGACGacaaacacaagttatt
tgtgattgtgGCCTAAACCAATCTAGATATTGGTAAACAATGACTGTTAG
CTGTAAAATCTGTAAAGTTATCGGTAATCGAACGAATCGCTACATGGAGG
GTCACATATCTCAAATATCTTTGGTCGTTTTTAAGCATTCCATTTGCCTG
GACCTTTAGACCTTCAAATGATACCAAAAGTGCAATCAAATCTATATAGA
GTTTCTTCAGGAAATTTGCAATTCAATTTGATTGTCCATTCTGTTTGATT
GGATATGATAATGATATTGacttgaaagtttgactttTATAGCGTGACCT
GACCAATCCAACGTTtgctctgttttgtttttgccatATATCAATTTTGT
TTAACTGTATATCAATAAGGAATTCATACAATACATATATACATCTGTGA
TAAAATTCTACCCAAAGCTGATATGATAATCAGATTGTCATACTCATATA
AAAGTTCAATAAGTTTCACGGTGTTTCATGCATCATGTTGGCATGGCACA
ATAATGTTGAATAACATCAATGTAAACAATGGTAGTAAAAACTTGCATGA
AGATCATAATCATCCGCCAGCATGATTCAAAACACCATTGTCACCAACCA
TTTCATATTGATTTGTCTTGTTTTTCTGGTAAAAAAGTTGTTAGTTATTG
ATTGTTCGCTTAATACTTCGAGCAAATCTTAATATGAATCAAATAGTTGT
GTCATGTTGGCATGAATGAAGTAACCAAGCTTCAACGtaagtttgttgtt
ttttggatGCAGGCATCAGCCATCTTTTGATTAACTTCCTTGGAATTACA
GGAATTAAATTGGAATTCCTGTCTTATCTTTTCGTTATCCTTTCCAGTCA
AATACATCTAGTCGGGTTCATGTTGAATGTACTCCTGACTGTATTATATC
TAACATTACATAATAACAGAATAATAATAGAACAACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003230-exon-sc0000025-1491911889:574511..575597 | TCONS_00003230-exon-sc0000025-1491911889:574511..575597 | Clytia hemisphaerica | exon |
| TCONS_00003230-exon-sc0000025-1510915933:574511..575597 | TCONS_00003230-exon-sc0000025-1510915933:574511..575597 | Clytia hemisphaerica | exon |
| TCONS_00003230-exon-sc0000025-1575043694:574511..575597 | TCONS_00003230-exon-sc0000025-1575043694:574511..575597 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025 | supercontig | sc0000025:574511..575597 . |
Blast
The following BLAST results are available for this feature:
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