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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003239 ID=TCONS_00003239|Name=TCONS_00003239|organism=Clytia hemisphaerica|type=transcript|length=1334bp
AGAGAGCATGCAGGGAAAGTGAAGGTGAAGCGAACCTCGAGAAATGGCAA
ATCAAGCAAGGATAAAACAACACCAGCTGCGATTATTATTCCACTTGAAG
AGACTATTTTAAAACATGGTGAATTTAAATGCATATTACATGCCACAGAC
CCAGCAGGTGCTCTCAAGAAATATCCAAGATTAACATCTCAAGAGTACGT
CAACTTTGAATTCGATGAGATTACATTAGAAACCATCAAAGAGGCATGTA
ATAAACATTTCAGACACAAGTCTGAAAAAGTCTTGCCACCTGGTATGACA
TGTGATCTTTTAACATCTGATCTTGGTCCGTCGTGTGAAAAGTTGAGCCA
TTTAGAGGAAAAACTTGCCCATGTCAGGTACATAAAAATCCAAGACCGAT
CCAATGCCAATGGAAATAATGAATATGAAAGTACTCGCCATAGCACTATC
ACTACTACTCAATCTACTACTAACAAGATGATTGGCCCCTCTCACAACTT
CCCTACCAGCATTAAATTGccgaaaatattgaaaagtgcACCACcaccta
aaattttaaaatcaaaaatggtGGCACCACCTAAAAGTCTTGGGGTATCC
TCCANAAATGCACTTGCTTCAAATTTTGCAGCTCAGATGAAAAACGAATT
GCCCAATGATTATCTCTGTATGGAGTACAATAGTCTGATGCTTGGTACAG
TAATGGAAACAAAAGAGATAGCCACGGTGGAAAGATTCATTTAAGGTCAA
TTCCTTAAGTATGTGAACAATGATGGTAATGTTATTCCAACCAATAGGCT
TATGCAAGACATGGCAGAAGCATTCAGTCACTTCACTTTTGCAAAATCAA
ACAGTCAACTTATGGTTTTAGATATTCAAGGGTCAAATGAAATTATGTTT
GATCCAGAGGTTGCTACAGTTGGGGATACCTATGATGAAAACGGATCTCT
TAATTTTTGTATGGGGAATATGTCCAAGGAGGCTATAGTAACATTTTTTC
GTATGCACAAGTGTGGGACATTGTGTCAACTATTGAAAATAGACAGTTTG
AAAATAGTTGATGTTAATGAATAGGTTGCAAAGTGACTGATAAAAAAAGT
TgagatttttttacaaaagttgtTGAGATTTGTTAATGACAATTGTTGAG
ATTTGTTTTAACTTACACAAGGACGATTGATGAAAGTTTTGTCTAAAAAA
AATGTGCAATTTTAATACACTGAAACGTTgcgttattttttgtttttaaa
ttcatctACCCTACTTGTGCTGTTTATATTGATATCATAAGTTATGACCT
TGCTTTGCCAAGCCCTAGGAGAAAGGCCTGTTTC Run BLAST on NCBI protein sequence of TCONS_00003239-protein >TCONS_00003239-protein ID=TCONS_00003239-protein|Name=TCONS_00003239-protein|organism=Clytia hemisphaerica|type=polypeptide|length=247bp
REHAGKVKVKRTSRNGKSSKDKTTPAAIIIPLEETILKHGEFKCILHATD
PAGALKKYPRLTSQEYVNFEFDEITLETIKEACNKHFRHKSEKVLPPGMT
CDLLTSDLGPSCEKLSHLEEKLAHVRYIKIQDRSNANGNNEYESTRHSTI
TTTQSTTNKMIGPSHNFPTSIKLPKILKSAPPPKILKSKMVAPPKSLGVS
SXNALASNFAAQMKNELPNDYLCMEYNSLMLGTVMETKEIATVERFI Run BLAST on NCBI transcript from alignment at sc0000025:707437..708770 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003239 ID=TCONS_00003239|Name=TCONS_00003239|organism=Clytia hemisphaerica|type=transcript|length=1334bp|location=Sequence derived from alignment at sc0000025:707437..708770 (Clytia hemisphaerica)
GAAACAGGCCTTTCTCCTAGGGCTTGGCAAAGCAAGGTCATAACTTATGA
TATCAATATAAACAGCACAAGTAGGGTagatgaatttaaaaacaaaaaat
aacgcAACGTTTCAGTGTATTAAAATTGCACATTTTTTTTAGACAAAACT
TTCATCAATCGTCCTTGTGTAAGTTAAAACAAATCTCAACAATTGTCATT
AACAAATCTCAacaacttttgtaaaaaaatctcAACTTTTTTTATCAGTC
ACTTTGCAACCTATTCATTAACATCAACTATTTTCAAACTGTCTATTTTC
AATAGTTGACACAATGTCCCACACTTGTGCATACGAAAAAATGTTACTAT
AGCCTCCTTGGACATATTCCCCATACAAAAATTAAGAGATCCGTTTTCAT
CATAGGTATCCCCAACTGTAGCAACCTCTGGATCAAACATAATTTCATTT
GACCCTTGAATATCTAAAACCATAAGTTGACTGTTTGATTTTGCAAAAGT
GAAGTGACTGAATGCTTCTGCCATGTCTTGCATAAGCCTATTGGTTGGAA
TAACATTACCATCATTGTTCACATACTTAAGGAATTGACCTTAAATGAAT
CTTTCCACCGTGGCTATCTCTTTTGTTTCCATTACTGTACCAAGCATCAG
ACTATTGTACTCCATACAGAGATAATCATTGGGCAATTCGTTTTTCATCT
GAGCTGCAAAATTTGAAGCAAGTGCATTTNTGGAGGATACCCCAAGACTT
TTAGGTGGTGCCaccatttttgattttaaaattttaggtgGTGGTgcact
tttcaatattttcggCAATTTAATGCTGGTAGGGAAGTTGTGAGAGGGGC
CAATCATCTTGTTAGTAGTAGATTGAGTAGTAGTGATAGTGCTATGGCGA
GTACTTTCATATTCATTATTTCCATTGGCATTGGATCGGTCTTGGATTTT
TATGTACCTGACATGGGCAAGTTTTTCCTCTAAATGGCTCAACTTTTCAC
ACGACGGACCAAGATCAGATGTTAAAAGATCACATGTCATACCAGGTGGC
AAGACTTTTTCAGACTTGTGTCTGAAATGTTTATTACATGCCTCTTTGAT
GGTTTCTAATGTAATCTCATCGAATTCAAAGTTGACGTACTCTTGAGATG
TTAATCTTGGATATTTCTTGAGAGCACCTGCTGGGTCTGTGGCATGTAAT
ATGCATTTAAATTCACCATGTTTTAAAATAGTCTCTTCAAGTGGAATAAT
AATCGCAGCTGGTGTTGTTTTATCCTTGCTTGATTTGCCATTTCTCGAGG
TTCGCTTCACCTTCACTTTCCCTGCATGCTCTCT Coding sequence (CDS) from alignment at sc0000025:707437..708770 >TCONS_00003239 ID=TCONS_00003239|Name=TCONS_00003239|organism=Clytia hemisphaerica|type=CDS|length=744bp|location=Sequence derived from alignment at sc0000025:707437..708770 (Clytia hemisphaerica)
TTAAATGAATCTTTCCACCGTGGCTATCTCTTTTGTTTCCATTACTGTAC
CAAGCATCAGACTATTGTACTCCATACAGAGATAATCATTGGGCAATTCG
TTTTTCATCTGAGCTGCAAAATTTGAAGCAAGTGCATTTNTGGAGGATAC
CCCAAGACTTTTAGGTGGTGCCaccatttttgattttaaaattttaggtg
GTGGTgcacttttcaatattttcggCAATTTAATGCTGGTAGGGAAGTTG
TGAGAGGGGCCAATCATCTTGTTAGTAGTAGATTGAGTAGTAGTGATAGT
GCTATGGCGAGTACTTTCATATTCATTATTTCCATTGGCATTGGATCGGT
CTTGGATTTTTATGTACCTGACATGGGCAAGTTTTTCCTCTAAATGGCTC
AACTTTTCACACGACGGACCAAGATCAGATGTTAAAAGATCACATGTCAT
ACCAGGTGGCAAGACTTTTTCAGACTTGTGTCTGAAATGTTTATTACATG
CCTCTTTGATGGTTTCTAATGTAATCTCATCGAATTCAAAGTTGACGTAC
TCTTGAGATGTTAATCTTGGATATTTCTTGAGAGCACCTGCTGGGTCTGT
GGCATGTAATATGCATTTAAATTCACCATGTTTTAAAATAGTCTCTTCAA
GTGGAATAATAATCGCAGCTGGTGTTGTTTTATCCTTGCTTGATTTGCCA
TTTCTCGAGGTTCGCTTCACCTTCACTTTCCCTGCATGCTCTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003239-exon-sc0000025-1491911889:707437..708770 | TCONS_00003239-exon-sc0000025-1491911889:707437..708770 | Clytia hemisphaerica | exon |
| TCONS_00003239-exon-sc0000025-1510915933:707437..708770 | TCONS_00003239-exon-sc0000025-1510915933:707437..708770 | Clytia hemisphaerica | exon |
| TCONS_00003239-exon-sc0000025-1575043694:707437..708770 | TCONS_00003239-exon-sc0000025-1575043694:707437..708770 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025 | supercontig | sc0000025:707437..708770 . |
Blast
The following BLAST results are available for this feature:
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