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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003299 ID=TCONS_00003299|Name=TCONS_00003299|organism=Clytia hemisphaerica|type=transcript|length=310bp
ttcttaacttttttcgtttttatcagtttgagttatttatatatcaatac
ttttctttttctaaaatgacagatattacatatcttcactatatatatat
gATGCGAAAAAGGACTTAAAtggtatatttgaaaaatgactGTCCGCATC
CAATATTAGAAAGACCCAAACAGATGTGCTTGAAAGGGCACTTTTGGGCA
TTGTCCACGAACGTAGAAGATATGGCAAGAAACCAGATGAAGAAGATTCA
GATACAAGAAGACAGCTTAATTTTTATAAGAATCAGCCAGGAACATCGCA
AGCTGCACAA Run BLAST on NCBI transcript from alignment at sc0000026:235..2170- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003299 ID=TCONS_00003299|Name=TCONS_00003299|organism=Clytia hemisphaerica|type=transcript|length=1936bp|location=Sequence derived from alignment at sc0000026:235..2170- (Clytia hemisphaerica)
TTCTTAACTTTTTTCGTTTTTATCAGTTTGAGTTATTTATATATCAATAC
TTTTCTTTTTCTAAAATGACAGATATTACATATCTTCACTATATATATAT
GATGCGAAAAAGGACTTAAATGGTATATTTGAAAAATGACTGTCCGCATC
CAATATTAGAAAGACCCAAACAGATGTGCTTGAAAGGGCACTTTTGGGCA
TTGTCCACGAACGTAGAAGATATGGCAAGGTATGATTTTTGATTGTTTGT
CCTTGAAACAACTGAATATATTACATTATCAATGAAACATTGTGCCAATT
TTAAGGCATTAGTTTTAGAGCTTATTTGTACTCTCCATAAATTTTTTCAG
ACCAGGTCGGGTAAGAATCTTGATAAAATTTAAGGGGGAGTAGTAAGAGT
TGTTTTTTTATAGTAAAGGGGTGATTTTGAGTTTGAGGAGGGGGTGGTGG
CTAAAATTCATGNACAGTAAAGGGGTGATTTTGAGTTTAAGGAGGGGGTG
GTGGCTAAAGTTCACAAAGTCAAATGCTGATTTAACACTTTTTGTTTTAT
TGTTTTTATTATTTGCTCTAAAAAGTAAGTTGGCACAAAGTCAAATGCTG
ATTTAACACTTTTTGTTTTATTGTTTTTATTATTTGCTCTAAAAAGTAAG
TTGGAGCAGTCTATGATCAAGCGTTTAAAAAAAAAGCATAGTAGTTCCAT
TAGTAAAGCATAAATTAGTAATCCTGCTTTTGAGTTTAAATATTAAAACA
ACTCCTTCTATTATTTCAGAAACCAGATGAAGAAGATTCAGATACAAGAA
GACAGCTTAATTTTTATAAGGTATTAATAGAACTAAACTTTTTATATTGT
TGTAGTTTTTATTTGTGTGTTTAAACAAAAATACCAGCAGTCCTTTTATC
TATGTTTTATTTTTAAGACTAAAAACACAATTAAAAATGTAAATCTAACA
TCACCACCATTGGTCACCATGGAGGCTGGGGTCAAAAGAATATTATAAAA
AGTCTTTAAAAAGGAAATTTTCATAAAGATTTCTGTGAGACAAAATGACC
GGTTAGTGTAAAACGCAGGTCACAGGTCACATGTCACGGGTCACAGGTCA
GTGTTGACAGGTCAGCTTCAAGTACTGTAAAACACAAAGAAAATGTTTCA
AAAACAGTTGTTAATGTCAAAAATATAATTCCAAAGGTATTTTATTGATC
TAGAACTATTTTAAAGCAAAAAATCTATCCACGTGCTTACCACATGCTTT
TGTGTTTTATGCTGCGTATAACACGGACCTGTAATACTTGTATTATATAT
TACACCTATATCACACATGTAATAAAAATTATCTTTTAAATGTTATATGC
ATGTTACGTATGTTAAATACAAAGAATACGTTTTAAAAAACATTGATCTC
ACTTTTGCTTTAAAAAGCTTCCTAACAGGAAAATAGCTATTACACAATCA
CTATGTCACATCTCATTTTATCTCATGCATCACCATGGGTATGATAACAA
GAATTGATGAAAATAGCATCAATGGGATTATATTTTATAAATATATGTTT
CAATATTTTTATCCCCTGCTTTGTATTTTTGATAAAATGACGTCACTATT
TTCATATCTCTAAAACAGTCTTCTAAATAACATATTTTGATATTATATTT
CCATTACACATAATATCTTCAGGAACTTATGTTATGAGTTGTATGTTACG
AGTGTGTTACAGTTTTCCGGTCCGTAATTTGTATGACCTGTGACCTGTGA
CCTGTGACCTGTGACCTGTGTTTTACACTAACCGCAAAATGACTTTGAAT
TTGAACACTGAACGACACTGAAAAGATGTATTTGCTTGCAAAATAATTTA
AAAAATTATAAGATTCAGAAGTCCTTTCACAGTCACATTTGCTTGTCAAC
ATTTAGAATCAGCCAGGAACATCGCAAGCTGCACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003299-exon-sc0000026-1575043694:1942..2170 | TCONS_00003299-exon-sc0000026-1575043694:1942..2170 | Clytia hemisphaerica | exon |
| TCONS_00003299-exon-sc0000026-1575043694:1351..1401 | TCONS_00003299-exon-sc0000026-1575043694:1351..1401 | Clytia hemisphaerica | exon |
| TCONS_00003299-exon-sc0000026-1575043694:235..264 | TCONS_00003299-exon-sc0000026-1575043694:235..264 | Clytia hemisphaerica | exon |
| TCONS_00003299-exon-sc0000026-1510915933:1942..2170 | TCONS_00003299-exon-sc0000026-1510915933:1942..2170 | Clytia hemisphaerica | exon |
| TCONS_00003299-exon-sc0000026-1510915933:1351..1401 | TCONS_00003299-exon-sc0000026-1510915933:1351..1401 | Clytia hemisphaerica | exon |
| TCONS_00003299-exon-sc0000026-1510915933:235..264 | TCONS_00003299-exon-sc0000026-1510915933:235..264 | Clytia hemisphaerica | exon |
| TCONS_00003299-exon-sc0000026-1491911889:1942..2170 | TCONS_00003299-exon-sc0000026-1491911889:1942..2170 | Clytia hemisphaerica | exon |
| TCONS_00003299-exon-sc0000026-1491911889:1351..1401 | TCONS_00003299-exon-sc0000026-1491911889:1351..1401 | Clytia hemisphaerica | exon |
| TCONS_00003299-exon-sc0000026-1491911889:235..264 | TCONS_00003299-exon-sc0000026-1491911889:235..264 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000026 | supercontig | sc0000026:235..2170 - |
Blast
The following BLAST results are available for this feature:
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