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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003323 ID=TCONS_00003323|Name=TCONS_00003323|organism=Clytia hemisphaerica|type=transcript|length=1245bp
CCAGCATATCAACAATACCAAGGCTACAAATACTACAAATCTGAAGAAGG
CAAAGACTTCAAGACTGAAGCCAAAGAAACCCAAGGAACCGTTTTCTCAT
ACGTTCTCAAACTTGATGAGACCATCCAAGGAATTGAGAAACCCGATGGT
ACTAAAGCATTCCCTGCCAAGACTTGCCAAGATTTACAAATGTGCCACCC
AGATGTCGAAACAGACGAATACTGGTTGGATCCAAACGGAGGTTCATCAT
GGGACAAATTCCCAGCACGTTGTGACTTTGATAACAAGAAACACGAGACA
TGCGTGCCACCGCACAAAGCTACTTTCGACAAGAAAGAATGGGTCACCAG
TGGTACTGATAAATGGACCTGGTTCTTACGCGATCTTGCCATCTCTGATG
ACttCGACTTCCCAGCCAACAATGTTCAATTGAGATACATGCGCTTGAAC
AGCATGACTGTCCGACAAAACATCACCTATCACTGCAAGAACTCACACGC
CCATACCGACAGCTTCGGAAACACCAAACCATTTGTTAAAGTCATGAGTA
ACGATTTGTTAGAAGTCTCTACTGACTCACACCACAAGAACAAGTTGAGA
GTTGTCAAAGATGAATGTAATAAGAAGGACGGAAAATGGCACAAGACTGT
CTTTGAATATACTTCAAAGGTCGGTGATAGACTGCCAATCAGAGATATTG
CAGTATTTGATGTAGCTGACAAGGGAGAAGAGTTCGGAATCGAACTTGGA
CCAGTTTGCTTTTCTTGAAGAAAATGACTTTCTTTGAGAGAGCAAGAATG
AAGAATGATAGAGATTCTTTATCTCTTCATTATATGATTGAGGTCTGGTC
CTTGTTTTGTTGCTGATTAAACCAGAGCTTNGAATGATAGAGATTCTTTA
TCTCTTCATTATATGATTGAGGTCTGGTCCTTGTTTTGTTGCTGATTTAA
CCAGAGCTAGCCAAGATGGTTAGCCTGGAGGAAGAGTTTATTACACATAC
CAAATCACACATTTTAAGGACCAGATCATAATTTTATATAACAATTACAA
ACACACATTATTGTACAGAAGTTTTTTAATAAACTACGtagataattttt
tgaaaaaatataatgcGCGCGCGATGGGAAAATGCAAACTGGCTAAAACA
CAGGGGggtaaattaaaaaatatgaatatgcaaaaaatattaaaaaatat
taattaaatGTGTCATTTCTTCGTCACCTATCCCTAAGATCAgcc Run BLAST on NCBI transcript from alignment at sc0000026:304087..319271- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003323 ID=TCONS_00003323|Name=TCONS_00003323|organism=Clytia hemisphaerica|type=transcript|length=15185bp|location=Sequence derived from alignment at sc0000026:304087..319271- (Clytia hemisphaerica)
CCAGCATATCAACAATACCAAGGCTACAAATACTACAAATCTGAAGAAGG
CAAAGACTTCAAGACTGAAGCCAAAGAAACCCAAGGAACCGTTTTCTCAT
ACGTTCTCAAACTTGATGAGACCATCCAAGGAATTGAGAAACCCGATGGT
ACTAAAGCATTCCCTGCCAAGACTTGCCAAGATTTACAAATGTGCCACCC
AGATGTCGAAACAGGTACTTAAAAAACTTATTTTCTTTGTTGTAGAGACA
CCTCCCGTAGCACAGGGTAAAGGTCTAAAAGAAAACCTTAAAATTATGTC
TCTCTGCTTTATGTTCACAAGCTAAGGGTATTTTGGAAAATCCTCATTCA
TTTCCTGTAGGCTGTTATAAGGAGGCCTCTTTCTAAAAATTGTTCTCCTG
ACATTCTTGTCCATGGTTGATAAGATCGGATGGATTGAAAAATCAATCAT
TTCCCTTACTCTTTCAGACGAATACTGGTTGGATCCAAACGGAGGTTCAT
CATGGGACAAATTCCCAGCTCGTTGTGACTTTGATAACAAGAAACACGAG
ACATGCGTGCCACCGCACAAAGCTACTTTCGACAAGAAAGAATGGGTCAC
CAGTGGTACTGATAAATGGACCTGGTTCTTACGCGATCTTGCCATCTCTG
ATGACGTAAGTACCCACACTTTGAAGGTTAAGTGAAAACCAGGCCAGTTA
AAACTTTTTTGTGACTAAATAATTTCTTCCTAAGCGGCAAATCTAATCAA
GGAATAATCGAGTTTGTGCCATTTAATTTTCAAACTTTTTCTTTGCCAAT
GTACAATGTTAGAAAACCTTAATATCTTATATTTTTTGCTATAGTTCACC
TACCCAGCCAACAATGTTCAATTGAGATACATGCGCTTGAACAGCATGAC
TGTCCGACAAAACATCACCTATCACTGCAAGAACTCACACGCCCATACTG
ACAGCTTCGGAAACACCAAACCATTTGTTAAAGTCATGAGCAACGATTTG
TTAGAAGTCTCTACTGACTCACACCACAAGAACAAGTTGAGAGTTGTCAA
AGATGAATGTAATAAGAAGGACGGAAAATGGCACAAGACTGTCTTTGAAT
ATACTTCAAAGGTCGGTGATAGANATTTGTTAGAAGTCTCTACTGACTCA
CACCACAAGAACAAGTTGAGAGTTGTCAAAGATGAATGTAATAAGAAGGA
CGGAAAATGGCACAAGACTGTCTTTGAATACACTTCAAAGGTTGGTGACA
GATTGCCAATCAGAGATATTGCAGTATTTGATGTTGCTGACAAGGGAGAA
GAGTTCGGAATCGAACTTGGACCAGTTTGCTTTTCTTGAAGAAAATAACT
TTCTTTGAGAGAGCAAGACTGAAGAATGATAGAGATTCTTTATCTCTTCA
TTAAATGATTGAGGTCTGGTCCTTGTTTTGTTGTTGATTAAACCAGGGCC
AGTCCCAAGGTTTCTTTACAATTAAACTTCAGATCACACAAATCTTAAGG
ACCAGATTTTCAAGCTCAACAAAATCATTCAAAGTTTTGTTTTTAAACTT
AACTTATAAATTCTTTGTACAGAATTTTTTAGAATTTTATACATGTTACA
TATTTTATTTTTTTTGAAAAAATTATAATGCACGCGCGATGGGAAAATGC
AAACCGGCTAAAACACAGGGGGGTAAATTANTGAAAAAATTATAATGCGC
GCGCGATGGGAAAATGCAAACCGGCTAAAACACAGGGGGGTAAATTAAAA
AAATAAATGCAAAAAATACCAAAAATATATATGAAATCTATTGTTGTTAT
TTATCTAGAGGTCANAAATACCAAAAATATATATGAAATCTATTGTTGTT
ATTTATTTAGAGGTCAAAATTGGCTCAAAATGGGCTTTAGGCAACCCAAT
AGAAAATCTTGGACAGGGATTGATCTTACTGACCTTACAAAAAGACTTTA
TTAAGAATTTGGTGACCGCATCTGACCCACAAAGAATTATGAGGGTTGTT
AACAAAGTTTTGACTTGGCGACAAAAGGACAAACAGTCTCTGAAAGTCCA
TGTAAACATAGAAAACAAAGGAGATATTGAATTTTGTTTAAAATCTTGTT
TACTCCACAAACAAGATGGGTTTCCTGCTGTTCACAAAAGACTGTGTTGT
TTTCATCATTGCTTAGTTATGGGGGTGGTTCTGAGTAATAGCTTTTAGAA
TAGACACTCAAGTGTTTGCTTTACGAGTCAACACGGAGAACAAAAGTCAA
ATGTCGTTCTTCATTGTTTAGATCAGTCGGAAGTGATGCTTTTCTTTTGT
TCGACTGTCATTTCATTGTATGACGAATTTTGACGAGCTAAACATCAATT
CTTAAATTGACGGCAACAAAAAATTTGTAAAGACGCTAAAAAAAACAAGC
ACTCCCTCCATCTGGTATGTTTTCTGTTCAAAATGCAGTGAAAATAGAGT
GATTATGCAGCTGCTATGGAGAGTCTGTTTGATTTAAGCTTAAGAATAAG
GTTTACGAGAACAGTTGACTTCGCTGTGCTATTTAACTTTAGTGACCCTG
TCATATTTTCGGATTAGCCAATCAAAACAAGGGATATGAACAATAGGATA
GTGTTTCAAGGATTCCATAAAGCTTACCCGTGGAAAGTGAATGAGATAGA
GTAGGAAAGGCGAGGAGTGGTTCAAAGAGCAACCTTACTTTGAATTAATA
CGATCGTTGTGGAAAGAGCTGGGACTGGTTAGTTGCTTGCACCTACGGTG
ATCGAAGCAGGCTTTTGGCCAGCCAGCATACAAAAATGCGCTTTTCCACT
GGCGAACGACAACTTTGGTTGTTGTTCATAGCTGTATTCAGCACGCTCGC
AAACGCTCAAGAAGGTAAGTTAGTTTCAAAGCTATATGATTAATAATTGG
AGTAAAAGACTAGACCTTTAGTCTAAAGGTTCACGACTAGAAATGTAATA
CCTAAAGGGAATAAATTTTCTAAGCAAAAAGTCAAGGTCTTATATATCTT
CTTATATTTGTCTTAATGATATTAAGTAAGGGGAAGTAAAGGAAGAAATC
TCAAGGGTTGGAACCAAAATATAAAATAATGATTACATACTAAGGAAGAA
TTTTTCTATCAGAAACCCGAAGAAAGACCATAGCCAAAAAGATTCTATCA
GATATTTCTGAGAATCTAGAGAAAATCTTTGCGGTTTTGAGCGTCTTAAT
TCGAGATTTATGATTTCAAAACTGAAAATAAGACACAACAAATTTATTTT
TAGAATTACTATGTAAAAGAGACCATTCTTATACTTTACATCTCCTTGAC
AACAATGTATTATGAAATGACACGATTTTTGACTGACATACAGTAAATCA
AGAGCCGAAATGATTTTAAATCGTGATATTTTTTTATTATGAGCTGCTAA
AAGAGACTAATAAAAAAAGGCCATAAATCACGAAGTTAACCGAAGGGTAA
TTTTTAATGCAAAATCTTAAAATCTGATGCCCAGTTAAGCTAAAACTCGA
ACTTGTTTGAAACTTTAAAACAAATAAACTAAGGTTTTTCTGAAGTTAAA
GGTCTCGAAATGAAGGGTAGAAATTTTTTCTTGTACACGTTTTTTTATAA
GAACATCCAAAATTTTTGAAGCCTTTGGATGTTTTGTGTTTAAAGCCTAA
AATGTTCTTAACATGTTCTTATTTTGACCATTTTGTGAGAATTTTGGTCC
ATTTTCCCGAGATATTGGGTATTTTATATAGTCCGCAAAGCCTTAAATGT
TCTTAACATGTTCTTAAAATTTTGGCCGTAGAAGTCTTGTGTTCTTATAA
AAAAACGTGCAATGCTCATGTTGCTGTTGCATCATGGCCTAGCGAATTTA
TTTCTAAACGGACGGCAGATAATTTCAAAAGGAGGAAATCAGCACACTTG
ACATTTTCTTTCCTTGAAAAGGTCATATTACTCGTTAAGTAACAGAGGGA
AAAATTTTTTAAGCAAAACACGCCTGTCTAGAAATTTTTTTCTTACGAAG
TATCGGAAACACGTAGCTTCAATTTATGCATCAATGTGTTAAACAAGTTT
TATGTTAGATCATTATGAGCTAGTGTCTGGAATAAATACTGGTCGAAGCA
AAGATTTTTGTTTCAGACAGGTTTTTTTTTGTATAACAAATTAGCCCAAA
CTTTTATACTCTCATTGAATACTTTGCCAAAAATGCGCCATTTTTCAGCC
TGTGCTGGAAGCACTGCAATAAAATTTGTGAAGAATAACAGATAAAAAAA
CAATAAAATTCAGAAAATTCTGATTAGAATTGGGTGTAAATTCAAATTTC
GAATCTCATTTACGAGCCAAAAGAAAAGAAGTTTAGGCATTTTTCTCATT
TGAAAGAAATTCGAACACCAAATATATCTTATGTGTCAAATCATTTGAAA
GATAGGGAAATAAACAAAATAGAGAAGACAATAAACGTTTTTTGTAATAA
CATCCAAAAGATTGGGTTCTTATCTTTGTGAGTTTTAAGCCTAAAAATGT
TCTTATTTTCACCTTGTTGAGGTACTTTGTCCATTTTCCGAAGAAATCGG
GTGTTTTAGAGTCTGCAAAGCCTTGAAATGTTCTTAGCTTGTTCTTAATA
ATTTGGCCATCAAAGCCTTAGATTCTTATATAATTTGTTCTTATAAAAAA
CGTGTAAATCATTAACACTGTTTGGTGACTTCAACCTTGTGTAAACAAAA
CAGTTGATGGAGAAAGAAAGATATTCAAGTGTTTGAAAAAGGGGTTCACT
ATGGCTGTGTTTACATTATAAACATTGGGTCATTCCATTCCACTCTGTTT
ACATTGTCAACATTCTTACTATACCCCAATACACGTTTTTTTTATAAGAA
CATACTATATAAGAACATAAGGCTTCGAGGCCCAAAAATTTAAGAACATT
CTAAGAACATTCTAAGGCTTTGGGGACTTAAAAACATGCATTTTCTTAAG
AAATTACACCAAATGCTCAAAAAATGCTGAAAATAAGAACATTTTAAGAA
CATTTTTAGGCTTCAAATCAAAAAAACTAAGAACATCCGAAGGCTTTGAG
AATTTTTGACGTTCTTATAAAAAAAAAACGTGTACTGTCAGTTGATAGAA
TTATGAAAGGAAAGGCGCCTCAAACCTTTCTTTATCCCCTCAAATTAGAC
AATAATTTTAGCACCTTAGGAAGCTTATGGCCTTTCTGACATTCGGTATA
CTTTTAAATAATGATGTCAGGAAACATGACCGATAGTTTGTGGCATTTTG
ATTTCTACTGGACTCATACACGTTTTATATATAAGAATGAAGTATATAAG
AACATAAGACCAAATTGCAGCCTACAGAAAATTTTGAGAAACTTAAAAAC
TTTAGAATAGCATTAAAAGAATTCGAAATTTTTCGACACTTATAAAAAAA
CGTGTAAACATGTTTTTCAAGTTTAAAGGGGTTAAAACGAATGACTAATT
TTCTCCATTCTGATTATATTTTACAGCGGGGAAACCAGGAGAATGTCCAG
TGATTGATACAGATTCGAAAGCGGAATGTCCACCGTTGACTGCAGGTTTG
AACAGTTGCTTATTGGACACTGATTGTCCCGGATCACAAAAATGTTGTAC
TGATGGTTGTACTTTGGTTTGTACCACTGTTGTCGTTCCAACAAGACCTA
CACCCATCAAAGGGGAACCAGGAGATCCAGGTGAACCAGGAGAAGATGTA
AGAATGATTTATTTTTTATCAGGCCTTGGTAATATAAAAATCTTAAGTAT
GCAAGGATCTTGCTTATTTTAGGTTTTATCCACACTGTAAAAATACAAAT
TTCTCTTTTGAAAAATATACTGGACTATCAAAAGCTTGACAAATACTTAA
ATAGGGTTAATTTCGCGGATGGCACTTTTGGGTGGCAATATTTTAACGAT
TTTGTACATTATAAGCAACTCTTTGATGCTGTAAACATTCAAACAGTGTT
TCTTTGACATTTTTCTAGTTTTGTTTAGAAATATTTCGCGGATAAGGTCT
TTTCAAATTTCCATTGGGATTTAATTTCGTGGATAACACCCAAATCCGCG
AAATTTAACCCCCGCCAAAATTAATCCAATTAAAGTAGATCATTAAATTA
ATTGGCATACAAATTTTTAGGGACCTAATGGACAAAAAGGCCCAGATGGA
AGGCGAGGTTTTGGTGGAGTCAAAGGATTGAAAGGAACCAGTGGAAAACA
AGGACAAAAAGGAAAACGCGGCAGACCTGGACCCCCAGGACCACCAGCTG
GCACTGGCACCGGCCCAGTTGGGCCAGTAAGTTTGAGAATTCAGAATTTC
ACACTAGAGACCAGACTCGATAACCTAACATTAACTTAAACCAAAAAATC
GCTGAACATTTTCCAAAATATTTTGATACATTTCCATCATTACGTCGATG
GAATTTTAAACGCTTACTGATCGACAATATATTGCTGTAGTCTAGGCAGG
CTTCGACCAGTTTCACTATAATAAGTTCAATCCTGTACCTTAAACATTAC
TGTTGGGAATTTAGACTCCAGAGTTTATGAAATACAACATCTCCACATCA
GAACTAATTTTGAGACTTGTTTTATAGCTCGGAGAGAAAGGCGGCAATGG
GGACGAAAAAGGTCCTGGACCAAATGCTGGAGGTGAATTTGATAACCTTA
ATGAAAATGGTTTTGTCACACCAAAAGAAGGGCCACCAGGACCATTAGGG
CCAAAAGGACGCGAAGGTCCCCGAGGACCATATGGAGAACGCGGAGAGCC
AGGACTTCCTGGAGAAGCTGGCGGTGCTGGCGAAAAAGGAGAACTTGGTC
CAACCGGATCTGCTGGAGAAGCTGGTCGCGATGGAATCAATGTAAGTAAC
GTATGGGACAAAAAAATTGCTTTGGAGCTTCCTTTCTAAAGGAGGGAGGA
TGTTGAAATTCTTCATTTAGATGACAAAAACCGATTTAAAATTTGAAAAC
ATAACTATTGTCAATTTTTATTGAAGAAAATGACTGAGAAGGAATGATTT
CTATTAAAACTCAAAGAACTTCTTTTTGATATACTTCAAAATTGGAAACG
CAAATATAAGATGAAGGAGTGAATGAATGAATAAATAACCTTTTTTATTA
GGGTGAACGTGGAGACCCAGGAAGAATCGGCCAAACTGGACCAAGAGGAA
GTCAAGGAGACCGAGGACCCCAAGGCGTCCGTGGAGCTGCCGGTTACAAA
GGATTGAAGGGAGATCGCGGAGAGACTGGTGAAAAAGGAGGCACTGGAAT
TGAAGGAGATAAAGGAATAGCTGGAGACAATGGTCTGGATGGTGATAGTG
GACCACGAGGACCACAAGGTTTACAAGGTTCCCCAGGACCTGCTGGAACA
TCAGGACCAACTGGACCTAAGGGACCACTTGGATCGACTGGACCTCCAGG
ACCACCAGTAAGTATTAGTTACTTAAATTCCCTTCACTTTTGACGTCAAA
AAGAAACATTCTCGAATTGTATTTCATTATTTACAATATTTCCGCAGTTA
AATCCTAAAAACGAGAAAATTAGATTGAAATAAATTTTGGCCAGATAAAA
ATGTAACACCAATGGCAAGATATCCTGAATATTAACTATTCCATAACTAT
TTTCAGGGACCTGCAGGATTACCAGGAACACCAGGAAAAGCAGGTGTCGA
TGGGGCCAAAGGAGAAGATGGAGCTTTCGGATCAAGAGGTGAACGTGGAG
AACAAGGAATCCGTGGAGTGACTGGAGATGCTGGACCAAAGGGAGATGTT
GGTCAACCTGGTGCCCGTGGCCGAGATGGTAGACAAGGGAAGAAGGGAAG
CCAAGGTATGGCTGGNATAGCTGGAGACAATGGTCTGGATGGTGATAGTG
GACCACGAGGACCACAAGGTTTACAAGGTTCCCCAGGACCTGCTGGAACA
TCAGGACCAACTGGACCTAAGGGACCACTTGGATCGACTGGACCTCCAGG
ACCACCAGTAAGTATTAGTTACTTAAATTCCCTTCACTTTTGACGTCAAA
AAGAAACATTCTCGAATTGTATTTCATTATTTACAATATTTCCGCAGTTA
AATCCTAAAAACGAGAAAATTAGATTGAAATAAATTTTGGCTAGATAAAA
ATGTAACACCAATGGCAAGATATCCTGAATATTAACTATTCCATAACTAT
TTTCAGGGACCTGCAGGATTACCAGGAACGCCAGGAGAAGCAGGTGTCGA
TGGGGCCAAAGGAGAAGATGGAGCTTTCGGATCAAGAGGTGAACGTGGAG
AACAAGGAATCCGTGGAGTGACTGGAGATGCTGGACCAAAGGGAGATGTT
GGTCAACCTGGTGCCCGTGGCCGAGATGGTAGACAAGGGAAGAAGGGAAG
CCAAGGTATGGCTGGACCTCAAGGACAACGAGGACCCCCAGGTACTCGAG
GACTTCAAGGTTTAAGAGGACCCGACGGAAGTATTGGAGGAACTGGTACC
CGAGGAGAACCAGGAGAACAAGGTGGTCTTGGTCTAGCAGGTCTCAAAGG
AACTCGTGGAGATCCAGGACCACCAGGAAACCCAGGACCAGCTGGAGGAC
CAGGGAAACGAGGAAAAGCTGGTCGGGATGGGCCTAATGGGCCCGCAGGA
CCTGATGGCGAACGTGGACAACAAGGTTTACCAGGAAGCCCTGGAGACCC
AGGAACCCCAGGACCAAAAGGGCAACAAGGAGACCGTGGAGAGATCGGTA
AACGAGGATTGAAAGGATCATCTGGAGGACCAGGAGAGCCAGGAGAAGTT
GGACCACAGGGAGATCGTGGACCATCAGGGCCACCAGGAAAATCAGGAAG
ACCAGGAAAATCTGGACAACGTGGTGTCCCAGGAAAAGACGGAAGGCCAG
GACTGATGGGACAACAAGGACGACGCGGTCTTGTCGGATCACAAGGTCTT
CAAGGACCAAAAGGAGCCAGAGGACCATCTGGAGGAATTGGTGAACCAGG
AAGCGTTGGGCTTAAAGGTAATACTGGAGACAAAGGACAAAAAGGAGCCC
AAGGACAAGCTGGACCTCAAGGTATCGATGGCGCTGCTGGAGAATTGGGT
GCTCCTGGAGCCCCTGGAAATGCAGGAAGAACAGGACCACCGGGACCCGT
CGGAGAAGCCGGTGCCCCAGGCCGTGATGGAGAACCAGGAAAAGATGGAC
TTCGAGGAGACAATGGAAAAACAGGAGAACAAGGTCCAAGAGGTCCACCT
GGAGCTAACGGACCAACTGGCCTGAGAGTAAGTCGAACTTTTACTTGTTA
CCAAACCCAAATAATCTATAAGTTATCTGAAAAATGAGCTTTTTCTCGAA
AAGTTACTGAGAGTCCTTGGCTAGACCTTAACGAAGCCTTATTTGCCAAA
ATAAAAAAATCATAGGTCATATAAATCATTTCAACAATTTCTTTCCTTCT
AGGGATCGCCTGGATTGAATGGAGAAAGTGGAGAACCAGGAGCAGAAGGA
ATCCCAGGAGAAAAAGGACCTTCTGGACCAAACGGAGTCACTGGATCTCC
AGGAGCACCAGGTGCCCAAGGATCTCCAGGAATGAGAGGACCCGATGGAT
CAAAAGGAGAACATGTAAGCAGTTTTCAAATATATAAATCTTAATCTCAA
GGAAAAAAGTGAAAACCAGGGAAATTTATCTTTCAATCATCTTTCAATTG
AGTCCTCTAGAGCAATCGAATTCACAGAGGCTAGTTATCACCACCTATAC
TAACAACTGTACGTAACTTTGCGTAAAATCTGCCAGCAAGGAAAAAACAT
TCGATTTTGAAAATTCAATTTTTCAGACAAATCGAATGTCTCGTCCATAA
TGGCGTAAACTTTGAAACTTTCCAACCTAGACGAAACTCAATTCATCTTT
CTTTCCCATTTTCAGGGTTCCAGAGGGCCAAAAGGACAACCAGGAGAAAA
TGGCAAAAATGGACAAAGAGGAGCTGATGGATTACCAGGACCAGCTGGAC
CTTCAGGAGAAACTGGACCTAAGGGAGAAACCGGACGACCAGGAGCTAAC
GGACTTCAAGGAAAACGTGGAAAACCAGGATCACAAGGAAACCCAGGATC
ATCTGGATTACCAGGAGAGCCAGGATCTATTGGATTAAGAGGAGGAGATG
GCTCCAAGGGAGAGCGAGGACCTCGTGGAGATAAGGGTGTTTCTGGCAAA
TCTGGACCACCTGGACCTGACGGAGATATTGGTCAAATTGGGCAGATAGG
ATCGGATGGTAACAAAGGATCGAAAGGCCCAAGAGGATCAGCTGTAAGTA
TAAAACCAATATTTATGAAGTGCTATATCCACAGTACAACTACCATCTGC
ATCTTTGCCTGTCTTGCTGNATGAAGTGCTATATCCATAGTACAACTACC
ATCTGTATCTTTGCCTGTCTTGCTGTTTTTGTATCTTCATCCGTACATTT
CGATAGCCAACCGTAGTGCAGTGGTAGAGCATCCCACTACGGTTCGCAAG
GTTGTGGGTTCAACCCCCAGCCGGGTCATACCAAAGATTTTCAAAATGGT
ACCTGATGCCTATCTGCTTGATGCTCAACAATTAAAAGAAGGATCAAGGG
TAAAGTTGAGCAATCCAGGGAGAAAGAGTGGCGCCCTCCCTTACCTTCGG
GTAGACAGCTATCGAAAGAGGAGCCTCCGGGTCGCCTCCGACTGCGGTCG
CAAACTCACTTACTTTTACTTGATAACTCTAAAAGGGAAAAATCTTACCA
AGGAATGTTATGCAATAACTGATGTGATATTTTCAGCACCTTCNCCTATC
TGCTTGATGCTCAGCAATTAAAAGATCAAGGCTAAAGTTGAGCAATCCAG
GGAGAAAGAGTGACGCCCTCCCCTACCTTCGGGCAGAGGTCTAAAGAGGA
GCCTTCGGGTCGCCTCCGACTGCGGTCGCAAACTTACTTACTCTTACTTG
ATAACTCTAAAAACCTTACCAAAGAATGTTATGCAATAACTGATGTGATA
CCTTTTAAAACAATCTTAAATTACATTTTAGGGTAACCAAGGAGCACCAG
GTATCCCAGGAAACCGTGGACGACGTGGGCCAACTGGAAACCGAGGACGT
TCTGGACCACCAGGACCCTCAGGGCGTGATGGATCAAAAGGATCTCCAGG
AGAAGCTGGATTACCAGGACGACCAGGAGACAATGGTGCACCAGGAATGG
CAGGAAAGGACGGAAGCAATGGAGATCCAGGAGATGATGGTATCCCTGGT
ATTCAAGGAACAATGGGTGCTGCTGGACCAATAGGCGCCCGTGGATCCCC
AGGACGTGTTGGTATGCCAGGATTTCCAGGATCTCAAGGAAAATCCGGTG
AAAAGGGAGAACCAGGAGTTGCTGGAACCGCAGGAAAGGCTGGAAAGAAA
GGACCTCCAGGACCACAAGGTGTCGCCGGTGCTACCGGATTCCCAGGAAA
ACCAGGAAAAGACGTAAGGACCCTTTAACTTTCTTTTCTATACTTCAAAG
CTATTTCAATGGAAAGTATTTCTGAACTTACTTGGTTTAATACGTTTACT
TAATGTTTAATAATACTTGCGATCAATCATAACCTCATACGAGATAAAGG
ACATCAATAAATTTCCATTTTCAGGGAGCTGGTGGAAAAGATGGAAAAGC
AGGAGGCCCTGGTGAAGTTGGAACAAAAGGTGATGCAGGAACACCCGGAT
ATCCCGGATCACCGGGAACGGCAGGTATGCCCGGAATCGCTGGAGCTGCT
GGTACTAAAGGCAAGAGCGGATCGAAAGGAATGGCTGTAAGTTGATGATA
TGAACTTTTGGAATTTTCAAAAATTTAATTGTTGGTCCTATATTTACAAG
ATACAGAATTCATATAAATTAAGCTTGAACCAGACAGACAACATGAGTAG
ACATAGAACATTATATAAATTTGCCCCAACAAATCGNGCAGGTATGCCCG
GAATCGCTGGAGCTGCTGGTACTAAAGGCAAGAGCGGATCAAAAGGAATG
GCTGTAAGTTGATGATATGAACTTTTGGAATTTTCAAAAGTTTAATTGTT
GGTCCTATATTTACAAGATACAGAATTTATATAAATTATTAAAGGTAAGA
GCTTAGAGGCTTGAACCAGACAGACAACATGGTTAGACATAGAACATTTT
ATAAATTTTCCCCAACAAATCGAGGTAGGGAGGGGGAGAAATAAACCACA
TTAAAGACTGATAATCGGAAGATCCTAAAGATATCCACTATGTGAAAATC
TCGAATTTGATTACTTTTCTCTAGGGACGAGATGGAGCTAAAGGAAGCAA
AGGTCTCCAAGGACGAGATGGAACCATTGGCAACAGAGGTGCCAAGGGAA
ACAAAGGAAATAACGGAGATACAGGAGAAAAGGGAGACAAAGGATGGAGA
GGTATGACTGGCCCAACTGGTCTTCCAGGACCCATTGGTATGCAAGGAGA
AGTCGGTGTCGATGGACCAAAAGGAGCCTCCGGACCCGCCGGAGATGATG
GACCAAGAGGACGCGCTGGACGCGAAGGACCACCCGGAGGACTCGGAGAT
GCTGGACCAGAAGGAATTAAAGGATCCAATGGACCACGAGGACGAGGCGG
TGAAGACGGTATTCCAGGACCTTCTGGACCACCCGGACCTCCAGGACCCC
CAGGATTGCCAGGAGGTTTTGGTGCCGGTGGTTTAACTTTGCCTCCGTTT
GGCGGGAACACGGAGAAAGGACCAGCATACCAACAATACCAAGGCTACAA
ATACTACAAATCTGAAGAAGGCAAAGACTTCAAGACTGAAGCCAAAGAAA
CACAAGGAACCGTTTTCTCATACGTTCTCAAACTTGATGAGACCATCCAA
GGAATTGAGAAACCCGATGGTACTAAAGCATTCCCTGCCAAGACTTGCCA
AGATTTACAAATGTGCCACCCAGATGTCGAAACAGGTACTTAAANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTAAAATACAATCCTTATTGACTTGAAGCTTTAG
TAGGCCTTTCAAAGTAACTGAAGTGATATTGGAACAAAATAATCAGCGCT
TAGAGACAACTCTGCTTTTTGGTAAATAAGAGCTTGAAAAGAGTCACATA
TTACAGTTTGAACTATTTTTCAAAAGATATGAACTGGATTTTTTACTATA
TACAAAGCTTTATTTATATTCTAAAGTTGGTTAAAGCATAGGTTAAAGGT
TTTATTTTTAAAACAGTAATTTATGTGCTTCGAGGAATGAATTATGAATG
TGTCTGTAATAAAACACACAAAGGTGTACATTAAAAATACTTCCGTTAAG
TTAAGAATTATAATTCTTCTTCCTACTTCAGACGAATACTGGTTGGATCC
AAACGGAGGTTCATCATGGGACAAATTCCCAGCACGTTGTGACTTTGATA
ACAAGAAACACGAGACATGCGTGCCACCGCACAAAGCTACTTTCGACAAG
AAAGAATGGGTCACCAGTGGTACTGATAAATGGACCTGGTTCTTACGCGA
TCTTGCCATCTCTGATGACGTAAGTACCCACACTTTGAAAGTTTTAAGTG
AAAATCACACTTGATTCAAATTAACTATTTTCTAGCAATTCCTCAGCCCG
AGGCTCCAAAATTAGGAAAAAAAAGATAAATATTCCTCCAAGGAATAAAA
GTTTTTTCAGTAAGATCCAATCATTTTCAAAGATATAAACTTTAAGGCAA
TAAATAAATTTAGGGGCTGCTTTTATGGAGGTGGGCTGGACCGGCTAGCT
GAGGTGGAATGGTGGAATTTTCGAACGTTACGTCACAGTTTTTGACGAAC
CAAATGGCTAAAAACAGATCACGTGACGTTCGAAAATCCATCCCACCCCA
CATAGCCGGACCAGCCTGTCTCCACATGAACAGCTCCTAACAGATAATGA
GTTTAAGAGGTCCTCTGAAGATGAAGATATCGACTTACAAAGAAGGGTTG
GTCTAGTCCAAACCCTATTGAAGTTCAGCTAAATCTTTCTGAATCAGACT
TATTAGTCGTTTTCATTTTCGACTAAAAGATCTGTATCTTTAAATTTCTA
AACTGCATGAACGATCTAACATGTATATTCCTTCAACCTCTGAGAGACTT
TTCAATCAAAGCTCCTTTTTTTATTTTCTAGTTCGACTTCCCAGCCAACA
ATGTTCAATTGAGATACATGCGNTCTGAGAGACTTTTCAATCAAAGCTCC
TTTTCTTATTCTCTAGTTCGACTTCCCAGCCAACAATGTTCAATTGAGAT
ACATGCGCTTGAACAGCATGACTGTCCGACAAAACATCACCTATCACTGC
AAGAACTCACACGCACATACTNAGATACATGCGCTTGAACAGCATGACTG
TCCGACAAAACATCACCTATCACTGCAAGAACTCACACGCCCATACCGAC
AGCTTCGGAAACACCAAACCATTTGTTAAAGTCATGAGTAACGATTTGTT
AGAAGTCTCTACTGACTCACACCACAAGAACAAGTTGAGAGTTGTCAAAG
ATGAATGTAATAAGAAGGACGGAAAATGGCACAAGACTGTCTTTGAATAT
ACTTCAAAGGTCGGTGATAGACTGCCAATCAGAGATATTGCAGTATTTGA
TGTAGCTGACAAGGGAGAAGAGTTCGGAATCGAACTTGGACCAGTTTGCT
TTTCTTGAAGAAAATGACTTTCTTTGAGAGAGCAAGAATGAAGAATGATA
GAGATTCTTTATCTCTTCATTATATGATTGAGGTCTGGTCCTTGTTTTGT
TGCTGATTAAACCAGAGCTTNGAATGATAGAGATTCTTTATCTCTTCATT
ATATGATTGAGGTCTGGTCCTTGTTTTGTTGCTGATTTAACCAGAGCTAG
CCAAGATGGTTAGCCTGGAGGAAGAGTTTATTACACATACCAAATCACAC
ATTTTAAGGACCAGATCATAATTTTATATAACAATTACAAACACACATTA
TTGTACAGAAGTTTTTTAATAAACTACGTAGATAATTTTTTGAAAAAATA
TAATGCGCGCGCGATGGGAAAATGCAAACTGGCTAAAACACAGGGGGGTA
AATTAAAAAATATGAATATGCAAAAAATATTAAAAAATATTAATTAAATG
TGTCATTTCTTCGTCACCTATCCCTAAGATCAGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003323-exon-sc0000026-1575043694:319058..319271 | TCONS_00003323-exon-sc0000026-1575043694:319058..319271 | Clytia hemisphaerica | exon |
| TCONS_00003323-exon-sc0000026-1575043694:305703..305890 | TCONS_00003323-exon-sc0000026-1575043694:305703..305890 | Clytia hemisphaerica | exon |
| TCONS_00003323-exon-sc0000026-1575043694:305055..305090 | TCONS_00003323-exon-sc0000026-1575043694:305055..305090 | Clytia hemisphaerica | exon |
| TCONS_00003323-exon-sc0000026-1575043694:304087..304893 | TCONS_00003323-exon-sc0000026-1575043694:304087..304893 | Clytia hemisphaerica | exon |
| TCONS_00003323-exon-sc0000026-1510915933:319058..319271 | TCONS_00003323-exon-sc0000026-1510915933:319058..319271 | Clytia hemisphaerica | exon |
| TCONS_00003323-exon-sc0000026-1510915933:305703..305890 | TCONS_00003323-exon-sc0000026-1510915933:305703..305890 | Clytia hemisphaerica | exon |
| TCONS_00003323-exon-sc0000026-1510915933:305055..305090 | TCONS_00003323-exon-sc0000026-1510915933:305055..305090 | Clytia hemisphaerica | exon |
| TCONS_00003323-exon-sc0000026-1510915933:304087..304893 | TCONS_00003323-exon-sc0000026-1510915933:304087..304893 | Clytia hemisphaerica | exon |
| TCONS_00003323-exon-sc0000026-1491911889:319058..319271 | TCONS_00003323-exon-sc0000026-1491911889:319058..319271 | Clytia hemisphaerica | exon |
| TCONS_00003323-exon-sc0000026-1491911889:305703..305890 | TCONS_00003323-exon-sc0000026-1491911889:305703..305890 | Clytia hemisphaerica | exon |
| TCONS_00003323-exon-sc0000026-1491911889:305055..305090 | TCONS_00003323-exon-sc0000026-1491911889:305055..305090 | Clytia hemisphaerica | exon |
| TCONS_00003323-exon-sc0000026-1491911889:304087..304893 | TCONS_00003323-exon-sc0000026-1491911889:304087..304893 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000026 | supercontig | sc0000026:304087..319271 - |
Blast
BLAST of TCONS_00003323 vs. Swiss-Prot (Human)
Match: CO2A1 (Collagen alpha-1(II) chain OS=Homo sapiens GN=COL2A1 PE=1 SV=3) HSP 1 Score: 172.555 bits (436), Expect = 5.271e-46 Identity = 89/227 (39.21%), Postives = 132/227 (58.15%), Query Frame = 1
Query: 112 LDETIQGIEKPDGTKAFPAKTCQDLQMCHPDVETDEYWLDPNGGSSWDKFPARCDFDNKKHETCVPPHKATFDKKEWVTSGTD--KWTWFLRDL------AISDDFDFPAN-NVQLRYMRLNSMTVRQNITYHCKNSHAHTD-SFGNTKPFVKVMSNDLLEVSTDSHHKNKLRVVKDECNKKDGKWHKTVFEYTSKVGDRLPIRDIAVFDVADKGEEFGIELGPVCF 762
L+ I+ I P+G++ PA+TC+DL++CHP+ ++ +YW+DPN G + D C+ + ETCV P+ A KK W +S + K WF + + DD P NVQ+ ++RL S QNITYHCKNS A+ D + GN K + + ++ +E+ + + + +KD C K GKW KTV EY S+ RLPI DIA D+ +EFG+++GPVCF
Sbjct: 1262 LNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG--ETCVYPNPANVPKKNWWSSKSKEKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRLLSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTALKDGCTKHTGKWGKTVIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCF 1486
The following BLAST results are available for this feature:
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