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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003510 ID=TCONS_00003510|Name=TCONS_00003510|organism=Clytia hemisphaerica|type=transcript|length=1659bp
gttttgtttcAAATTGACTAATCAACAGTTGTCTTAAAACAagatcaaat
tttctcaaattaatACCTCACGAACAACAGgtctaagaaagaaaaagcgc
gcgattttacaaatttgggAATAATCAAGGAATTTCTTCACcgttttcat
cttcgttttcttTCAGCTCAAAAGATGAtagacaaaaattttttaataaa
atgtaCTGAAGCTTTTTCTTTGTTATACATATCTCTTTAATATGTAACGG
AAGATTGCCCCACCCCCGTGTGACGTCATGTCGCACAAAAGGAGTCAAAT
TCCGTTAGAAAAagttacgcatatcaagaacaTAATCCTAACGATGATAT
ATAATCAAATGTAAAAGAGTATAAGAAGAGTATAGTCCTAACGATAATGT
ATAATCAAATGTAATAAAAGAGTATTAAGTCTGATAACGTAATGATTTGA
ACCCCGTGACGCCATCTTTATACCATATATGATGAAATTCATTGCGTAAT
CATACTTATACGCATATCAAGATTGAGAAGAGTGTACTCTTTCTATACGA
AATTTGCTttgaaatattaacaaaattccAAATTTAGCTTACCGGACAAT
CCCCCCAGTAAACTTCCTAAATTTACTGAAAGAACGATATAATTGTAATT
TAATGGGGGGATTCACCGGGGAATTGTTTTTCTGAATGAGTTTCTGCAGc
tgtaaaaatcaacaaaagcaATCGAAACTTTTTTCGTCCTATGTACGATA
CAGTGTGTTNGAAGTAAGCACGCTCTAACAAGCTCAAGTAAGCTAAGCAA
GTCACTTTTGCGATTTACGATTTTGCGATTTACGATCGACTTTAAACTTG
GTGTATTGGTCCATGAAGTCATCCAATTCTTGTGTTATTTCTTTTGGCAC
CTTGGTATCTTCAAACAAAAAGTATTGGAGCACGCTGTAAGCGAGCTCCA
GTTGTTTGGGGTAATCAACATCCATCACGTAATAATATGCCAGCATCACT
TTAGAAGCCAATGCTAGGCCTTTATGTAACGGGACCTTGCATAGACAGGC
ACCAGCCAAAAAAAGAGAGAACGAATCATCGTCTTGGATGATGACTATTT
GAGTTATCTTCGAAACAACATCAAGTTTGGCaggattctaaaaaagaaaa
attatggtGGTAGATTTGAgggaatacacgcttttttataagaatatcag
ggtgaaaattggccaaatcgtaagaataccctccaGGGTGGGTTTCATag
attttaataagaatatagTCGTTTTCTATTTGGTAACAAAGACAACTGAG
TTTTTTTATTCAGCTTAGATTGAAATTTTTCGgtagaaatataattttag
ttTTTACGTGCACTAAAAAGTGCCACTCTCAATAAggtcatttctcatgt
ttgtatgAAGGTCAAGTCTGAAAATGTAAGactacgttaagaatatttca
cccttaattttggctattttcttAAGTATATATAGTGCAGGGGCTTATGT
ATTCTCGTGTGCACAGGTTTGTTAAAAGCAAACCAACTTTTGATCTGGTG
CCCTGACCCCTCAAGGATCAAGAAAATCTTGGGATACAAAATTCTAACAC
CCCTGTTGCCatggaaaatgacgtcattggttaccatAGCAACAAAAATT
AAAGtcgtc Run BLAST on NCBI transcript from alignment at sc0000028:943432..945169- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003510 ID=TCONS_00003510|Name=TCONS_00003510|organism=Clytia hemisphaerica|type=transcript|length=1738bp|location=Sequence derived from alignment at sc0000028:943432..945169- (Clytia hemisphaerica)
GTTTTGTTTCAAATTGACTAATCAACAGTTGTCTTAAAACAAGATCAAAT
TTTCTCAAATTAATACCTCACGAACAACAGGTCTAAGAAAGAAAAAGCGC
GCGATTTTACAAATTTGGGAATAATCAAGGAATTTCTTCACCGTTTTCAT
CTTCGTTTTCTTTCAGCTCAAAAGATGATAGACAAAAATTTTTTAATAAA
ATGTACTGAAGCTTTTTCTTTGTTATACATATCTCTTTANTTCAGCTCAA
AAGATGATAGACAAAAATTTTTTAATAAAATGTACTGAAGCTTTTTCTTT
GTTATACATATCTCTTTAATATGTAACGGAAGATTGCCCCACCCCCGTGT
GACGTCATGTCGCACAAAAGGAGTCAAATTCCGTTAGAAAAAGTTACGCA
TATCAAGAACATAATCCTAACGATGATATATAATCAAATGTAAAAGAGTA
TAAGAAGAGTATAGTCCTAACGATAATGTATAATCAAATGTAATAAAAGA
GTATTAAGTCTGATAACGTAATGATTTGAACCCCGTGACGCCATCTTTAT
ACCATATATGATGAAATTCATTGCGTAATCATACTTATACGCATATCAAG
ATTGAGAAGAGTGTACTCTTTCTATACGAAATTTGCTTTGAAATATTAAC
AAAATTCCAAATTTAGCTTACCGGACAATCCCCCCAGTAAACTTCCTAAA
TTTACTGAAAGAACGATATAATTGTAATTTAATGGGGGGATTCACCGGGG
AATTGTTTTTCTGAATGAGTTTCTGCAGCTGTAAAAATCAACAAAAGCAA
TCGAAACTTTTTTCGTCCTATGTACGATACAGTGTGTTNGAAGTAAGCAC
GCTCTAACAAGCTCAAGTAAGCTAAGCAAGTCACTTTTGCGATTTACGAT
TTTGCGATTTACGATCGACTTTAAACTTGGTGTATTGGTCCATGAAGTCA
TCCAATTCTTGTGTTATTTCTTTTGGCACCTTGGTATCTTCAAACAAAAA
GTATTGGAGCACGCTGTAAGCGAGCTCCAGTTGTTTGGGGTAATCAACAT
CCATCACGTAATAATATGCCAGCATCACTTTAGAAGCCAATGCTAGGCCT
TTATGTAACGGGACCTTGCATAGACAGGCACCAGCCAAAAAAAGAGAGAA
CGAATCATCGTCTTGGATGATGACTATTTGAGTTATCTTCGAAACAACAT
CAAGTTTGGCAGGATTCTAAAAAAGAAAAATTATGGTGGTAGATTTGAGG
GAATACACGCTTTTTTATAAGAATATCAGGGTGAAAATTGGCCAAATCGT
AAGAATACCCTCCAGGGTGGGTTTCATAGATTTTAATAAGAATATAGTCG
TTTTCTATTTGGTAACAAAGACAACTGAGTTTTTTTATTCAGCTTAGATT
GAAATTTTTCGGTAGAAATATAATTTTAGTTTTTACGTGCACTAAAAAGT
GCCACTCTCAATAAGGTCATTTCTCATGTTTGTATGAAGGTCAAGTCTGA
AAATGTAAGACTACGTTAAGAATATTTCACCCTTAATTTTGGCTATTTTC
TTAAGTATATATAGTGCAGGGGCTTATGTATTCTCGTGTGCACAGGTTTG
TTAAAAGCAAACCAACTTTTGATCTGGTGCCCTGACCCCTCAAGGATCAA
GAAAATCTTGGGATACAAAATTCTAACACCCCTGTTGCCATGGAAAATGA
CGTCATTGGTTACCATAGCAACAAAAATTAAAGTCGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003510-exon-sc0000028-1575043694:944942..945169 | TCONS_00003510-exon-sc0000028-1575043694:944942..945169 | Clytia hemisphaerica | exon |
| TCONS_00003510-exon-sc0000028-1575043694:943432..944862 | TCONS_00003510-exon-sc0000028-1575043694:943432..944862 | Clytia hemisphaerica | exon |
| TCONS_00003510-exon-sc0000028-1510915933:944942..945169 | TCONS_00003510-exon-sc0000028-1510915933:944942..945169 | Clytia hemisphaerica | exon |
| TCONS_00003510-exon-sc0000028-1510915933:943432..944862 | TCONS_00003510-exon-sc0000028-1510915933:943432..944862 | Clytia hemisphaerica | exon |
| TCONS_00003510-exon-sc0000028-1491911889:944942..945169 | TCONS_00003510-exon-sc0000028-1491911889:944942..945169 | Clytia hemisphaerica | exon |
| TCONS_00003510-exon-sc0000028-1491911889:943432..944862 | TCONS_00003510-exon-sc0000028-1491911889:943432..944862 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000028 | supercontig | sc0000028:943432..945169 - |
Blast
The following BLAST results are available for this feature:
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