TCONS_00004290 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004290
Unique NameTCONS_00004290
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length141

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004290 ID=TCONS_00004290|Name=TCONS_00004290|organism=Clytia hemisphaerica|type=transcript|length=141bp
CCCATTTTCGATATAAAATGCCTTGAAAAGTGGTATCCTTGCAATGGTAG
GTGTCTTTCAAAACACTCAAATatgtatacccctgtctcaaaaatctggg
ggggggggatttcccAACAAACATTTCTGGAAACCACAAGC
Run BLAST on NCBI

transcript from alignment at sc0000041:408056..408293-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004290 ID=TCONS_00004290|Name=TCONS_00004290|organism=Clytia hemisphaerica|type=transcript|length=238bp|location=Sequence derived from alignment at sc0000041:408056..408293- (Clytia hemisphaerica)
CCCATTTTCGATATAAAATGCCTTGAAAAGTGGTATCCTTGCAATGGTAG
GTGTCTTTCAAAACACTCAAATATGTATACCCCTGTCTCAAAAATCTGGG
GGGGGGGGATTTCCCAACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNATGAAGTCCCCTGTCTCAAAAATCTGGGGGGGG
GGGATTTCCCAACAAACACATTTCTGGAAACCACAAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002381XLOC_002381Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004290-exon-sc0000041-1575043694:408174..408293TCONS_00004290-exon-sc0000041-1575043694:408174..408293Clytia hemisphaericaexon
TCONS_00004290-exon-sc0000041-1575043694:408056..408076TCONS_00004290-exon-sc0000041-1575043694:408056..408076Clytia hemisphaericaexon
TCONS_00004290-exon-sc0000041-1510915933:408174..408293TCONS_00004290-exon-sc0000041-1510915933:408174..408293Clytia hemisphaericaexon
TCONS_00004290-exon-sc0000041-1510915933:408056..408076TCONS_00004290-exon-sc0000041-1510915933:408056..408076Clytia hemisphaericaexon
TCONS_00004290-exon-sc0000041-1491911889:408174..408293TCONS_00004290-exon-sc0000041-1491911889:408174..408293Clytia hemisphaericaexon
TCONS_00004290-exon-sc0000041-1491911889:408056..408076TCONS_00004290-exon-sc0000041-1491911889:408056..408076Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000041supercontigsc0000041:408056..408293 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004290 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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