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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004445 ID=TCONS_00004445|Name=TCONS_00004445|organism=Clytia hemisphaerica|type=transcript|length=1318bp
CAGAGTATCAATGAAATGCGAAATCGTTCAATTTTGCATGCGAGAAAAAA
ATAAGGGATATTTCAGTGGAGTTAACAGTAAAAAGACAAAAGTCTTTATG
TTATTGTTGTCATCCAAAGTAGATGATTCGGAAAGAGAGAACGAGGAGAG
AaagtaaaatgaagaaaatgatgATGGACACCATGGTTAGTAGATATGGA
TTTCACCGCTATACGATTTGCACTAAAGTTTCGATAACTCAGGATGTGTG
ACAGAAGCAGGGATTCAACTCGTAATGTCAGTCTTTCCTTTGGAAATGGA
AATTTAATCTTAGGACAGTTTAAGGGAGGTGCACCACTCGTATACTAAGA
ACAAAGTAGACGAGTTTATGTCAGGCTCGGCGGAACAacgtggggaggct
gaaggctcaaaatgaaataaaactcgctggtaatttgagaaaaaatctca
aGAATGGGAGAGACTGTTACATCTTCAACCCCAGAcaatatcaaaaagaa
aaccAAGCTCGGTCCTCTCACACAAGAGCCTTACTctataaaaataagca
aaactttgtcAAGGTTGGTGATTACACATTCAGAACTTGACTGGGATCTG
TTACAAAGTTGGCTGTCCAGAACAGAAAGAGCAGAGACAGAACTAATACC
ATTACCCTGAAGATCTTAAAGGTTCTTTTAAGATCTTATCAAAAGCAAGA
ATCTTGACTGATCTTACAAAGTTCTTATCAAGAATCTGACCAAAATCTTT
CTAGATGAAAATCTTTCAAGATCTTGACAGGAACTTAAAAAGATAGGTAG
GAATCCTTGAAAAAGTTTCGTTTGAATTCTTAATTGAGATTTTGCCAAGA
TACTTTGACAATCTTGATAAATCCTTTTTGGATAAAcaattcaaagattt
tttaagattattgaaatatctttataagTTTTCATTAAGATTCTTGAAAG
GGTTTCAAgagttttatttgattttttggatTAAAAACGAGATGGACAAA
AGTTGTTGATTCGTTGTTTCGTTCCAGGTCTTATTCAACACTTTTTTCCA
TCGAAACGAAAAACGATGAAAAGACGTGGTCAAGGTGCAGGAAGACCGTT
AATCATATGGCAACcgatcaaaaaaagaaaaccaaagatGACAAGGAGGG
GCCCCCAAGGACGGTAGTGGTGAAGAAACAGATGACTTCCAACCTGcgta
aaatttaattttagttttttttcagattataACCTGTAAATATTTTAAAC
TAAATAGTGCATGATAGTTGATATATGAAATAATATATTGTATACTTGTG
TGAAAAAGATATACATAC Run BLAST on NCBI transcript from alignment at sc0000044:240284..241601 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004445 ID=TCONS_00004445|Name=TCONS_00004445|organism=Clytia hemisphaerica|type=transcript|length=1318bp|location=Sequence derived from alignment at sc0000044:240284..241601 (Clytia hemisphaerica)
GTATGTATATCTTTTTCACACAAGTATACAATATATTATTTCATATATCA
ACTATCATGCACTATTTAGTTTAAAATATTTACAGGTtataatctgaaaa
aaaactaaaattaaattttacgCAGGTTGGAAGTCATCTGTTTCTTCACC
ACTACCGTCCTTGGGGGCCCCTCCTTGTCatctttggttttctttttttg
atcgGTTGCCATATGATTAACGGTCTTCCTGCACCTTGACCACGTCTTTT
CATCGTTTTTCGTTTCGATGGAAAAAAGTGTTGAATAAGACCTGGAACGA
AACAACGAATCAACAACTTTTGTCCATCTCGTTTTTAatccaaaaaatca
aataaaactcTTGAAACCCTTTCAAGAATCTTAATGAAAActtataaaga
tatttcaataatcttaaaaaatctttgaattgTTTATCCAAAAAGGATTT
ATCAAGATTGTCAAAGTATCTTGGCAAAATCTCAATTAAGAATTCAAACG
AAACTTTTTCAAGGATTCCTACCTATCTTTTTAAGTTCCTGTCAAGATCT
TGAAAGATTTTCATCTAGAAAGATTTTGGTCAGATTCTTGATAAGAACTT
TGTAAGATCAGTCAAGATTCTTGCTTTTGATAAGATCTTAAAAGAACCTT
TAAGATCTTCAGGGTAATGGTATTAGTTCTGTCTCTGCTCTTTCTGTTCT
GGACAGCCAACTTTGTAACAGATCCCAGTCAAGTTCTGAATGTGTAATCA
CCAACCTTgacaaagttttgcttatttttatagAGTAAGGCTCTTGTGTG
AGAGGACCGAGCTTggttttctttttgatattgTCTGGGGTTGAAGATGT
AACAGTCTCTCCCATTCttgagattttttctcaaattaccagcgagtttt
atttcattttgagccttcagcctccccacgtTGTTCCGCCGAGCCTGACA
TAAACTCGTCTACTTTGTTCTTAGTATACGAGTGGTGCACCTCCCTTAAA
CTGTCCTAAGATTAAATTTCCATTTCCAAAGGAAAGACTGACATTACGAG
TTGAATCCCTGCTTCTGTCACACATCCTGAGTTATCGAAACTTTAGTGCA
AATCGTATAGCGGTGAAATCCATATCTACTAACCATGGTGTCCATcatca
ttttcttcattttacttTCTCTCCTCGTTCTCTCTTTCCGAATCATCTAC
TTTGGATGACAACAATAACATAAAGACTTTTGTCTTTTTACTGTTAACTC
CACTGAAATATCCCTTATTTTTTTCTCGCATGCAAAATTGAACGATTTCG
CATTTCATTGATACTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004445-exon-sc0000044-1491911889:240284..241601 | TCONS_00004445-exon-sc0000044-1491911889:240284..241601 | Clytia hemisphaerica | exon |
| TCONS_00004445-exon-sc0000044-1510915933:240284..241601 | TCONS_00004445-exon-sc0000044-1510915933:240284..241601 | Clytia hemisphaerica | exon |
| TCONS_00004445-exon-sc0000044-1575043694:240284..241601 | TCONS_00004445-exon-sc0000044-1575043694:240284..241601 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000044 | supercontig | sc0000044:240284..241601 . |
Blast
The following BLAST results are available for this feature:
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