TCONS_00004576 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004576
Unique NameTCONS_00004576
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2183

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004576 ID=TCONS_00004576|Name=TCONS_00004576|organism=Clytia hemisphaerica|type=transcript|length=2183bp
AGCGGATATACTCCTCAATTATCGCAAGAGAAACAGTTTTCACAGTATAT
ATCttcaatatatattttttagtagttttcttaaaattgtttcatctcTC
CCTTGGTGTCAATTTATGAGTTAATGGTTCATTATCGTTGGTTAGTGCGG
AAATTCCGTGGCTGGAGGTCAATGTCGAGTTACAACTgcaatgaaaaaga
aatggaaTCCCAGAAAGtggaaaaaactgaaaatgttgGCAACGACAAAG
AGGAACTCTTTAATACTTTCTATAATAGTGTCACTTTGCATGGATTCAAA
TTCTTATTCGAGAAGAGCTCAATGCTTCGTAAGGGTGTTTGGTTTCTAAT
CATCATGGTTGCTTTTATGTGTTCTATTGCTTTATTCTTTGACCTCGTGG
GTGATTTTCTTGAACGCAAAACGAACATTGATACTATTGAATATTATGAA
GAAAACCATGAATTTccaacactgaccatttgtccTTACGACTCACAGTc
taaacaaaaattaaacaatTTAACAGTCAATTACACTAAGGCTGATTTTC
TGGACCTCGTCCAACGTATTTCACAACCAACCAGCGAGAATCTTTCTCTT
ACACCGgaaatccaaaattttctaaaagagTTAGACACACGTAATGTTAA
AAACTACATGGAGCTATTAAGTATGTATAATATGGACTTCAAAGATCTCA
TCGATAACagagtatatttgaacaatGAAACCTGTCAATATTACAGCAAA
TATTGCAGTAAACAGGACTTCGAGACGGTCATTTGGAATAACCATCAAAC
CTGTATCGAATTCAATTCATTCATTTCCGGTAAACCGAGTCTTGTTGTTG
GTAAAATCGATAATCGGTTCCGAGGATTTCAATTGTATTTGGATCTCGGA
CAAACGTCTTATTTTCGGACAGCTGATTTGCACGGTGTCATGGTGATGAT
TAACAAGTTTGGAAATGCCCATCATTTGCTACCAGATAAGTCGTACGTTA
GTGTCAAACCAGGCGAGATGGCTTTCATTAAATTGAAAGAATATGAGTCA
TCACTGCTACCACCTCCTTACCATTCGAACTGTGGTACCAGAGAGTATCA
TTTAATCAACAAGAAAAGACCATATACCAACACTCTGTGTAAATTTGATT
GTATAACCAATCATgtgtaccaaaaatgtggctGCGTGGGGGATGAAATG
AAACATATCAAAAAACGAAGTGTGAAATTATGCACACTTGAAAAAATGAT
TTGCTACAACTATTACAAAGCATTGTTTATGGAAAAAAAGtacaaagatt
gtttcaacCAATGTCCTCAAGAATGCACTCAAACAACATATAAAGTGAAA
AAAGCCACAGTAATGATCGGTAGCGATGAAGTGTACAAAAACATCCAGAG
AACTGTCCCCTCGAAAGCCAACATGACCCTGACTGAGATTAAAGAATATT
TCAGagaGAATATTGTTGGTATACatgtttcattttttgataatatCATC
ATCAAAGAAAAGATGATACCTTCAGTTCGATGGACCTGTCTAATCGcatC
GGTTGGAGGAGGAGTTGGTTTGGGACTTGGTTTTAGTTTCATTACAGCGT
TCGAATTCGTTTTCTTTATTTATGATTACATTAAACTTTCATTGAGAAGG
GTCATGTCAAGCAGAAAAGAAAGACGAGACGTTATTCAAGTCGTCAAAAT
GAATATGAACGCCGATTGAATGGATAGATCTATTGATTTAAAAGCTCTGA
AGGGCTAGATCcgaaactcttggatgggaaataaagctACTTATTTACCA
TCCAAAACACGTAACGCTTGTGTTCATTTTCtcgcttgagaaaggttgaa
gattcctctctagcccctcgggcttcaaactcaatggatACACCTTGCTA
TCCTTAAAACATGAGAAGACTGGGTCAAGTTTACTAAGAAAAGTTGACGT
CAAAATCTGTATGAATTAACATCAATGCAACAACTTTAGATATCTGACGC
AAATGAACACATTCGTCATtcgtgtagaagaatgaaaaggCGATAGTTGG
AAAACtatataccttattacacgaatatccAACAGTGTcagacaatttca
aaaagtataaaaagaagcataacccaaaaataaacatttccttggatttt
taaataaaaaacaacaagaaaatagagTCGATG
Run BLAST on NCBI

protein sequence of TCONS_00004576-protein

>TCONS_00004576-protein ID=TCONS_00004576-protein|Name=TCONS_00004576-protein|organism=Clytia hemisphaerica|type=polypeptide|length=531bp
MVHYRWLVRKFRGWRSMSSYNCNEKEMESQKVEKTENVGNDKEELFNTFY
NSVTLHGFKFLFEKSSMLRKGVWFLIIMVAFMCSIALFFDLVGDFLERKT
NIDTIEYYEENHEFPTLTICPYDSQSKQKLNNLTVNYTKADFLDLVQRIS
QPTSENLSLTPEIQNFLKELDTRNVKNYMELLSMYNMDFKDLIDNRVYLN
NETCQYYSKYCSKQDFETVIWNNHQTCIEFNSFISGKPSLVVGKIDNRFR
GFQLYLDLGQTSYFRTADLHGVMVMINKFGNAHHLLPDKSYVSVKPGEMA
FIKLKEYESSLLPPPYHSNCGTREYHLINKKRPYTNTLCKFDCITNHVYQ
KCGCVGDEMKHIKKRSVKLCTLEKMICYNYYKALFMEKKYKDCFNQCPQE
CTQTTYKVKKATVMIGSDEVYKNIQRTVPSKANMTLTEIKEYFRENIVGI
HVSFFDNIIIKEKMIPSVRWTCLIASVGGGVGLGLGFSFITAFEFVFFIY
DYIKLSLRRVMSSRKERRDVIQVVKMNMNAD
Run BLAST on NCBI

transcript from alignment at sc0000045:817656..826634-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004576 ID=TCONS_00004576|Name=TCONS_00004576|organism=Clytia hemisphaerica|type=transcript|length=8979bp|location=Sequence derived from alignment at sc0000045:817656..826634- (Clytia hemisphaerica)
AGCGGATATACTCCTCAATTATCGCAAGAGAAACAGTTTTCACAGTATAT
ATCTTCAATATATATTTTTTAGTAGTTTTCTTAAAATTGTTTCATCTCTC
CCTTGGTGTCAATTTATGAGTTAATGGTTCATTATCGTTGGTTAGTGCGG
AAATTCCGTGGCTGGAGGTCAATGTCGAGTTACAACTGCAATGAAAAAGA
AATGGAATCCCAGAAAGTGGAAAAAACTGAAAATGTTGGCAACGACAAAG
AGGAACTCTTTAATACTTTCTATAATAGTGTCACTTTGCATGGATTCAAA
TTCTTATTCGAGAAGAGCTCAATGCTTCGTAAGGGTGTTTGGTTTCTAAT
CATCATGGTTGCTTTTATGTGTTCTATTGCTTTATTCTTTGACCTCGTGG
GTGATTTTCTTGAACGCAAAACGAACATTGATACTATTGAATATTATGAA
GAAAACCATGAATTTCCAACACTGACCATTTGTCCTTACGACTCACAGTC
TAAACAAAAATTAAACAATTTAACAGTCAATTACACTAAGGCTGATTTTC
TGGACCTCGTCCAACGTATTTCACAACCAACCAGCGAGAATCTTTCTCTT
ACACCGGAAATCCAAAATTTTCTAAAAGAGTTAGACACACGTAATGTTAA
AAACTACATGGAGCTATTAAGTATGTATAATATGGACTTCAAAGATCTCA
TCGATAACAGAGTATATTTGAACAATGAAACCTGTCAATATTACAGCAAA
TATTGCAGTAAACAGGACTTCGAGACGGTCATTTGGAATAACCATCAAAC
CTGTATCGAATTCAATTCATTCATTTCCGGTAAACCGAGTCTTGTTGTTG
GTAAAATCGATAATCGGTTCCGAGGATTTCAATTGTATTTGGATCTCGGA
CAAACGTCTTATTTTCGGACAGCTGATTTGCACGGTGTCATGGTGATGAT
TAACAAGTTTGGAAATGCCCATCATTTGCTACCAGATAAGTCGTACGTTA
GTGTCAAACCAGGCGAGATGGCTTTCATTAAATTGAAAGAATATGAGGTC
AGTATGTGATTTAAAGGCTAAGAGTTCACGTTTTTATAAGAACATCCACA
ATTTTTGAAGCCTTAGTCTGTTGTTAACTTTTTGAGTTTAAAGCCTAAAA
ATGTTCTTAACATGTTCTTATTTTCACCATTTCATTAGTATTTTTGTCCA
TTTTTCTAAGAAATTGGATGTTTTAGGGTCCTCGAAGCCTTAAAATACTC
TTAACTTGCTCTTTTTTGCCATCGTAGCCTTATGTTCTTATATAGTTTGT
TCTTATAAAAAAAACGTGCATCTCCTCTGCGAAGAATCCATATTACTCAC
ACTTAACATTTTTTAGAAAAACGATTCGAGCCTTTAAACCACTTCTACTA
GTTGCAGTCTTCGCCGAAAAATCTTTCTTGGTGATGGTGAACTTAAATTG
AAGATGAAAGCTAATCATGGGTGATTAGGAGGACTCTATACTTTGTTTCA
TCATTAGGGAACCGCCTATTATGACGTTTTTTCAATAAAAATATTTTCAG
TAAATCAAGTCGTCCCCACGTAATCAAGGCTACTGATGGGCGTCAGTGAA
TACCCTGCTGTAGGCTTATGCGAGTTCTCTCTCTAAGAAGAAAGGATGTA
TTACTTTAAAGTACTGACTCACCATGAAAACCATTTTTCTAGACGTTGAT
ATAGCTTAAGAAAAATCACGAACATCTAAGAAAAACCCCAAAGCCAAAGA
AAATTTTCCCCGGAATGAGTTTACAGTCGGTAGAGTTTGCCAGTCTTCGA
AACTCTCTCGCCGCCATTTTTTTCTGTCTAACGCCAAAACGTTTATATTC
TTTCCGCCTTTGCTTTCCCTGTAACGAATGATATAACATCATCTAGCATT
TTTCATGTAGAAATTCTGTACAATGACATTTTATCATTGACTTTTAGTCA
TCACTGCTACCACCTCCTTACCATTCGAACTGTGGTACCAGAGAGTATCA
TTTAATCAACAAGAAAAGACCATATACCAACACTCTGTGTAAATTTGATT
GTATAACCAATCATGTGTACCAAAAATGTGGCTGCGTGGGGGATGAAATG
AAACATATCAAAAAACGAAGTGAGTCATTGATTTATTAAAGTTATTACAT
TTAAACAACCCTCGCTTATACTTATTATGTTTTTATACACCCCCTTTTCA
CAGACCCACTGGGACCACTTCCCATTGGAAAATTGGTGCTCCAATTTTTG
TCCCGAAAATAATCAAATAAACAAATCCTCACTGCAAAATATTATGTTAT
TTCTCCATCCCCACTGAATTTTTGTGACGTGAAAGCAATAGAATTCAAAT
CCCTAGTCATAAAAAAAAAAAAAAGTTGAAATATTAACCCCATCGAATTT
CAGTCCATTATTTTTACCCCACTGGCTGAATAAACCCTACCGGGTCTGCG
AGAAGGGGGTATTCTGTGTTCAAGTCGAAAAGAGACATCTAAGTTCTGAA
CTTTCTGCTGAAAACTACGAAAAGAATAGATAAGGGAGCGGTCATAAAGT
ATCTACTAGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTTTTTTGAGGGTTTAGGGGGGGGGTTCCAATTTTTTTTTTGGGA
AACTCAAGAGAAAATGTAGGAAGTCTAATTTCATAGTTTTACGTTTGAAG
ATATAAAAAATTTTTCGGCCTTACGGCCCACAACTCATAATTTATCTTAT
TGGATACATGTACATTTCATATTGCCATTATTTGGCCATCGTCGCCTTGC
CCTTATTGGTTTGTAACATTGAGCTAGGTGAGGGAAGTAGATTAGTGGCT
CTCACAGCTCATCCGAGTGGTTTGAAAAAGTACTTCCTAAAAGAAATTTG
TCAAAACAGAGTGTCTTTTAGCTAAAATGGTGGTGAAAAATATTGAAATT
CAAAACGCCTTAACATTTCAAATTACAAAAAACTAATTCCAAGTTTCTGG
ACTCAAAGATTCCGGGCGTTACTTTCAACGATAATGCTCTTACAGTTTAA
CATTTTCACTTAATAATGGAGGGCGCAAATAAGGACAAAAAATACCAGGG
GCGCCAATTTCATAGTTTGCACCCAGAAAATTAAGCCAGGTCGCTACTGT
TATACTTTAACTTAACAGGGCTAAACTATCTCCCTTACCTTATTTTGACA
TAAAAAACTGTCATACAAACAAATAATACTCTTTGTCTCTTTGTACNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGG
GGTGCGAATTTTTATTTGGATTTTTCAAAATATCCTCAACCCCTCTCTAG
TAGATACTTTATGACCGCTCCCTAAGGTAAAAAAGGAGAAAATAGAGACT
GTCTAAACCAATGAAGTATAAGCCTGAAGGGCTAGCGAATCTCTCACCTT
TCTCAGGCAAGAAAAAGTGAAGCCTTAAAAAATGCCCTTTATTTTCGATG
ACGGATTGAATCTAGCTTTTCTTTTGTTTTCGAGTGATATTTTTTTCGAA
ATCAAGTGGTAAATTTTAGTTTCAATCTACAATTTGTGTAGAAGGTGGGT
CTCAAGGCCGCCCAACTTTGTTGGCTCCAAATCCTACCAAGGAGATTCAA
TTCTAGCCCTTCGGGTTTATATTTCATTGGTCTAAACTAGTTTTTATATA
CGCACTACTTGAGTTTTTTGAGTGGGTAGAAATAAAAATATTTTTTGTGC
TGTGTGTGTTAACCCTTTAACGACCGATGACGAGATATATCGTCATCGCG
TTCCGTGCTAAAAATACTGATGACGAGATATCTCGCATATGCACATTATG
TTCCAAGTATACCAAGGAATTAAAATTCGTAAAATATTTTATGTCCAGCT
TCTAAAATAAAATATAAAATTGCAAAAAAAAGTTATTTTTTATTTCAATC
ATGCTGATATGAGTCTTTTTTGTGATTCTTGACAATTTTCTCTATGTCAT
TTTGTCTTATAACATTTTAGTTGTGTACTTCTTTTTTGCAGTCAGATACA
AAAATTTAATATCATATGTGGAATATTACACGCATTATAAACGACTCCAG
TCTATTTTAATGATGAATTTTTCCCAAATTTCATGTTTTTTTATTGACGA
GTTATCTCGTCTCGCAGTCGTGAATCCCTAAAGTACTTTTTGCCGAATTG
ATTCGTCATTCAGTCTTTTTGGCACGGGTCGTAAAAAAGTCGCGGTATTT
TACCAACCACCTAGGAAGAAAGGCTCGGTATATTAAGAACAGTCAGTTCA
AAAAGCCGCGGCATTTAAGGCACGGAAAAATAAAAAAAGCAGTCGTTAAA
GGGTTAATTTTTTTTAATCAGAGAAATACGTTTTTTTGACTTTTTTATGT
TGTATTTTTGTCATATGTTTTTGCTTTTTACTCCTTGATTATTTTTTCAG
TTTTTCTTTCTCACTATCACTACAACATCTTTCGATTTTTTTTCGAACAG
CTTGAAAAAACATAAATTTTTCCCATCTTAGGTGTGAAATTATGCACACT
TGAAAAAATGATTTGCTACAACTATTACAAAGGTAATTAATCTTTTTTCA
ATGTTTGAAAAGTTTCTCTGGTTAAATTTAATCTCTATATAGTACTGCAC
GTTTTTTTTGTAAGAACCTCCAAAAATTTTGTAGCCTTTGGATGTTCTTA
ACTTTTTGAGTTTCTAGACTGAAAATGTTCTTAGCTTGTTCTTATTCTCC
CTATTATGTGAGTATTTCTATCTATTTTCCTAAGTAAGAAATCGGGTGTT
TTAGACTCCCTAAAGCGTTGAAATGTTCTTAACTTGTTCTTCACATTTTT
GGCCGTCGAAGCCTTACTGTATGTTCTTTAATAAGTTTCATGCGTGCCAC
AAAAACTACGCTCCCACAAAGCACATGCTTATGGAAGCACAAGTTAGTAC
AGGGTGTCCGGGAAAAAAGTATCGAGCTCGAACATGATTCTGAGTAGAAG
GTTGTTGCGTGTGTTTAAGAAAATGTGAGAACTAGTTCGAGAGCTATCGG
CCTTTTTGTTAGGTCATAAGCCTCAGAATTTTAACCATCCTCAACGTGTT
CGCCGTATCGAAAACTGTCAAAAAAGTTTTACAGATCGAACACTAGCGGT
CTCTTTAATCTCCACGAGCCCAAAAAAGAGGTCAGAAAAGGGCTTGAAAT
TAGGTCTCATGGCTGTAACTTTAAATTCTGCTGGTAGTTAGTATATATAT
GGTGAAGATCAGAGATCTGACCTCAAGGAGAGAAAGTGTTGAAAATACTA
AATAAAATAAAGATGACATAAAAAGGGACTAATATTTTTATAATTATACG
TTTTTTTCCATTTTTTTCCATTTTTCTAAATATATAAATCAAACCAATCA
AACATTCTGTCAAGAACTGAGAATTTTATGCGAAAAAGAACCAACAAACC
GATAGACATAAAGTTTAAAAAGCCAAGCAGAAAAACAAAACAGCAATCAC
ATAAACACAAACACCAAAATCCACTCAAAAACCCAACCAATGCAATCTGG
AGTCCCCGACTTGCGACAGGTGCAGCGGCTTTAAACATGTTTTAAGGACG
TCCTCCCCCAGATTCCATAACCCTGAACCGACCCGCAGTCGTATATAGTA
ATAATTTTAGTCACCTCGTCAAAATTTAGTCACTAAGGGCCGACTAATAA
TTAAGACCGACTAAAAATTTGGGCAATTTCTAAATTTACAAGCAGATGGA
AAATAGAAGAAAGCTTAAAATACTGGAAAATAAGGAAAGCTAATTATAAA
CTTTTAATTTGGCCCAAATTTTTAGTCGGCCTTGATTTCAGTCGGCCAAA
TTTTTAGTCAGCCTAAATTTTTAGTCGGCCCAAATTTTTAGTCGGCCCTA
ATTTTAGTCACCAAGCCAAAATTTATTCACTTAGGGCCGACTAAGTTTTG
GCCGATAAGGTAAGACCAATTTAATTATCCCAAATTATTAACGCTTTCTT
TACACGTTTGAATGTCGTAGTTAACTATTTTCTAATTTCTTATCATGTGT
AGCATTCAGAATAATTATACATTGCCACATGTTGAATTAGAAAAACTACG
GTAAAAAAATGCCCTTAGTTTCGGGATTTTCAAATCTTGAACTAGGAGTA
GCTCAAGTCTTTGAGTTTAAAAGCCCGAAGAGCTGGTAGAAGAGAGGAAA
TCTTCAGCCTTTTCCAAGTAAGATAAAATTCTTAAGATTTGCATTGCATT
TGGGAAGACAGATTGAATCGATTATTTTTTCCGTTTTCACGCGAGTTTTC
TTTCGAAAGCTGGCAATAATTATTACTATCAACCCGCCGAATGTAAAGAC
CATACAGGTAATGGATATCGGATTCTTTTCACCCAATGAATTCTTCTCTA
GTCCTTTGAAATATGAAATCAATGACTGTAGCTACTTCTAGTAGCTCTAG
CAGTACTCAGAGAGCTCCACTTAGAGGCTGCGTCTTGCACAATTTTGCGA
CATAGAAATAGAATATTAGAGGAAATTAGTTCACTTTTACAATTTTGTGT
CTGTTTTAGCATTGTTTATGGAAAAAAAGTACAAAGATTGTTTCAACCAA
TGTCCTCAAGAATGCACTCAAACAACATATAAAGTGAAAAAAGCCACAGT
AATGATCGGTAGCGATGAAGTGTACAAAAACATCCAGAGAACTGTCCCCT
CGAAAGCCAACATGACCCTGACTGAGATTAAAGAATATTTCAGGTACATA
TTTTTAGTTGGTAATTTGGGTTTTTGTCAACAAAAAATAATCAAATTACA
TTTTAACAGTTCAGTCCTGGAATTGTAAGCAACAAATACAAACCTTTTTT
GTTCATCGCGGAAGAATCCAGGATTGATAATACTTTGGTTACTATTTTCT
ATACAGAAATGCTGATTAGCTCTATTCTCTACTTACTCAGGACTTTAAAT
TTATCATTGCTGCTCCTGACGCGGCTTTTATCTTAACCAATTTGGTGGGT
GGTGGATCAGTGAGACGCGGGCTTTTTCATTCAGATCGAGTTTTATTTTT
CTTTCAGAGAGAATATTGTTGGTATACATGTTTCATTTTTTGATAATATC
ATCATCAAAGAAAAGATGATACCTTCAGTTCGATGGACCTGTCTAATCGG
TAAGCCCCCTTTCCATGTTTCGCTTGTTTACCTGACGAATCACTATCTAA
GAGAAAAGCCCAAAGCCGAAGAAAATTCGCAAACGGGGTTTTTTGCCAAA
AAGAGTTTCCAGTCAGTACAGTTGCCGTTTCTTCGAAACTCTCCCGCCGA
TTTTTTTCCGCCATAACGCCATACCGCCATATTTTCCCGCTTTTACTATC
ACTGTAATGGACGATAACATCGTGTATACCTGTTAGTCACTTATAATCTC
TCTCTATCTACCTGTTTTAAAATAGTTACCAGTGCATCATGGCAGCACTA
GATGTGTTTATAATCTGTTCGAATTAAAGGAAATTTCGAGTTATGGAGTA
AGAGGTTTATAAGTTGTTGTTAAACTGAAGGGACCATAGTTAAGGAGACA
TTCGAGCAAAGAAACTCTCACTGAAATCACCCCTTTGTGTACATTTAAAT
GAGTGAATTCGAAGAGATTTCATGGGGCTTTATGATGTCAGACATTAAAT
TTTCAAAAATAAACACTGATAATTTTTGTTTTTCTTTTTTAGCATCGGTT
GGAGGAGGAGTTGGTTTGGGACTTGGTTTTAGTTTCATTACAGCGTTCGA
ATTCGTTTTCTTTATTTATGATTACATTAAACTTTCATTGAGAAGGGTCA
TGTCAAGCAGAAAAGAAAGACGAGACGTTATTCAAGTCGTCAAAATGAAT
ATGAACGCCGATTGAATGGATAGATCTATTGATTTAAAAGCTCTGAAGGG
CTAGATCCGAAACTCTTGGATGGGAAATAAAGCTACTTATTTACCATCCA
AAACACGTAACGCTTGTGTTCATTTTCTCGCTTGAGAAAGGTTGAAGATT
CCTCTCTAGCCCCTCGGGCTTCAAACTCAATGGATACACCTTGCTATCCT
TAAAACATGAGAAGACTGGGTCAAGTTTACTAAGAAAAGTTGACGTCAAA
ATCTGTATGAATTAACATCAATGCAACAACTTTAGATATCTGACGCAAAT
GAACACATTCGTCATTCGTGTAGAAGAATGAAAAGGCGATAGTTGGAAAA
CTATATACCTTATTACACGAATATCCAACAGTGTCAGACAATTTCAAAAA
GTATAAAAAGAAGCATAACCCAAAAATAAACATTTCCTTGGATTTTTAAA
TAAAAAACAACAAGAAAATAGAGTCGATG

Coding sequence (CDS) from alignment at sc0000045:817656..826634-

>TCONS_00004576 ID=TCONS_00004576|Name=TCONS_00004576|organism=Clytia hemisphaerica|type=CDS|length=9576bp|location=Sequence derived from alignment at sc0000045:817656..826634- (Clytia hemisphaerica)
CATCGGTTGGAGGAGGAGTTGGTTTGGGACTTGGTTTTAGTTTCATTACA
GCGTTCGAATTCGTTTTCTTTATTTATGATTACATTAAACTTTCATTGAG
AAGGGTCATGTCAAGCAGAAAAGAAAGACGAGACGTTATTCAAGTCGTCA
AAATGAATATGAACGCCGATTGAAGAGAATATTGTTGGTATACATGTTTC
ATTTTTTGATAATATCATCATCAAAGAAAAGATGATACCTTCAGTTCGAT
GGACCTGTCTAATCGCATTGTTTATGGAAAAAAAGTACAAAGATTGTTTC
AACCAATGTCCTCAAGAATGCACTCAAACAACATATAAAGTGAAAAAAGC
CACAGTAATGATCGGTAGCGATGAAGTGTACAAAAACATCCAGAGAACTG
TCCCCTCGAAAGCCAACATGACCCTGACTGAGATTAAAGAATATTTCAGG
TGTGAAATTATGCACACTTGAAAAAATGATTTGCTACAACTATTACAAAG
TCATCACTGCTACCACCTCCTTACCATTCGAACTGTGGTACCAGAGAGTA
TCATTTAATCAACAAGAAAAGACCATATACCAACACTCTGTGTAAATTTG
ATTGTATAACCAATCATGTGTACCAAAAATGTGGCTGCGTGGGGGATGAA
ATGAAACATATCAAAAAACGAAATGGTTCATTATCGTTGGTTAGTGCGGA
AATTCCGTGGCTGGAGGTCAATGTCGAGTTACAACTGCAATGAAAAAGAA
ATGGAATCCCAGAAAGTGGAAAAAACTGAAAATGTTGGCAACGACAAAGA
GGAACTCTTTAATACTTTCTATAATAGTGTCACTTTGCATGGATTCAAAT
TCTTATTCGAGAAGAGCTCAATGCTTCGTAAGGGTGTTTGGTTTCTAATC
ATCATGGTTGCTTTTATGTGTTCTATTGCTTTATTCTTTGACCTCGTGGG
TGATTTTCTTGAACGCAAAACGAACATTGATACTATTGAATATTATGAAG
AAAACCATGAATTTCCAACACTGACCATTTGTCCTTACGACTCACAGTCT
AAACAAAAATTAAACAATTTAACAGTCAATTACACTAAGGCTGATTTTCT
GGACCTCGTCCAACGTATTTCACAACCAACCAGCGAGAATCTTTCTCTTA
CACCGGAAATCCAAAATTTTCTAAAAGAGTTAGACACACGTAATGTTAAA
AACTACATGGAGCTATTAAGTATGTATAATATGGACTTCAAAGATCTCAT
CGATAACAGAGTATATTTGAACAATGAAACCTGTCAATATTACAGCAAAT
ATTGCAGTAAACAGGACTTCGAGACGGTCATTTGGAATAACCATCAAACC
TGTATCGAATTCAATTCATTCATTTCCGGTAAACCGAGTCTTGTTGTTGG
TAAAATCGATAATCGGTTCCGAGGATTTCAATTGTATTTGGATCTCGGAC
AAACGTCTTATTTTCGGACAGCTGATTTGCACGGTGTCATGGTGATGATT
AACAAGTTTGGAAATGCCCATCATTTGCTACCAGATAAGTCGTACGTTAG
TGTCAAACCAGGCGAGATGGCTTTCATTAAATTGAAAGAATATGAGCATC
GGTTGGAGGAGGAGTTGGTTTGGGACTTGGTTTTAGTTTCATTACAGCGT
TCGAATTCGTTTTCTTTATTTATGATTACATTAAACTTTCATTGAGAAGG
GTCATGTCAAGCAGAAAAGAAAGACGAGACGTTATTCAAGTCGTCAAAAT
GAATATGAACGCCGATTGAAGAGAATATTGTTGGTATACATGTTTCATTT
TTTGATAATATCATCATCAAAGAAAAGATGATACCTTCAGTTCGATGGAC
CTGTCTAATCGCATTGTTTATGGAAAAAAAGTACAAAGATTGTTTCAACC
AATGTCCTCAAGAATGCACTCAAACAACATATAAAGTGAAAAAAGCCACA
GTAATGATCGGTAGCGATGAAGTGTACAAAAACATCCAGAGAACTGTCCC
CTCGAAAGCCAACATGACCCTGACTGAGATTAAAGAATATTTCAGGTGTG
AAATTATGCACACTTGAAAAAATGATTTGCTACAACTATTACAAAGTCAT
CACTGCTACCACCTCCTTACCATTCGAACTGTGGTACCAGAGAGTATCAT
TTAATCAACAAGAAAAGACCATATACCAACACTCTGTGTAAATTTGATTG
TATAACCAATCATGTGTACCAAAAATGTGGCTGCGTGGGGGATGAAATGA
AACATATCAAAAAACGAAATGGTTCATTATCGTTGGTTAGTGCGGAAATT
CCGTGGCTGGAGGTCAATGTCGAGTTACAACTGCAATGAAAAAGAAATGG
AATCCCAGAAAGTGGAAAAAACTGAAAATGTTGGCAACGACAAAGAGGAA
CTCTTTAATACTTTCTATAATAGTGTCACTTTGCATGGATTCAAATTCTT
ATTCGAGAAGAGCTCAATGCTTCGTAAGGGTGTTTGGTTTCTAATCATCA
TGGTTGCTTTTATGTGTTCTATTGCTTTATTCTTTGACCTCGTGGGTGAT
TTTCTTGAACGCAAAACGAACATTGATACTATTGAATATTATGAAGAAAA
CCATGAATTTCCAACACTGACCATTTGTCCTTACGACTCACAGTCTAAAC
AAAAATTAAACAATTTAACAGTCAATTACACTAAGGCTGATTTTCTGGAC
CTCGTCCAACGTATTTCACAACCAACCAGCGAGAATCTTTCTCTTACACC
GGAAATCCAAAATTTTCTAAAAGAGTTAGACACACGTAATGTTAAAAACT
ACATGGAGCTATTAAGTATGTATAATATGGACTTCAAAGATCTCATCGAT
AACAGAGTATATTTGAACAATGAAACCTGTCAATATTACAGCAAATATTG
CAGTAAACAGGACTTCGAGACGGTCATTTGGAATAACCATCAAACCTGTA
TCGAATTCAATTCATTCATTTCCGGTAAACCGAGTCTTGTTGTTGGTAAA
ATCGATAATCGGTTCCGAGGATTTCAATTGTATTTGGATCTCGGACAAAC
GTCTTATTTTCGGACAGCTGATTTGCACGGTGTCATGGTGATGATTAACA
AGTTTGGAAATGCCCATCATTTGCTACCAGATAAGTCGTACGTTAGTGTC
AAACCAGGCGAGATGGCTTTCATTAAATTGAAAGAATATGAGCATCGGTT
GGAGGAGGAGTTGGTTTGGGACTTGGTTTTAGTTTCATTACAGCGTTCGA
ATTCGTTTTCTTTATTTATGATTACATTAAACTTTCATTGAGAAGGGTCA
TGTCAAGCAGAAAAGAAAGACGAGACGTTATTCAAGTCGTCAAAATGAAT
ATGAACGCCGATTGAAGAGAATATTGTTGGTATACATGTTTCATTTTTTG
ATAATATCATCATCAAAGAAAAGATGATACCTTCAGTTCGATGGACCTGT
CTAATCGCATTGTTTATGGAAAAAAAGTACAAAGATTGTTTCAACCAATG
TCCTCAAGAATGCACTCAAACAACATATAAAGTGAAAAAAGCCACAGTAA
TGATCGGTAGCGATGAAGTGTACAAAAACATCCAGAGAACTGTCCCCTCG
AAAGCCAACATGACCCTGACTGAGATTAAAGAATATTTCAGGTGTGAAAT
TATGCACACTTGAAAAAATGATTTGCTACAACTATTACAAAGTCATCACT
GCTACCACCTCCTTACCATTCGAACTGTGGTACCAGAGAGTATCATTTAA
TCAACAAGAAAAGACCATATACCAACACTCTGTGTAAATTTGATTGTATA
ACCAATCATGTGTACCAAAAATGTGGCTGCGTGGGGGATGAAATGAAACA
TATCAAAAAACGAAATGGTTCATTATCGTTGGTTAGTGCGGAAATTCCGT
GGCTGGAGGTCAATGTCGAGTTACAACTGCAATGAAAAAGAAATGGAATC
CCAGAAAGTGGAAAAAACTGAAAATGTTGGCAACGACAAAGAGGAACTCT
TTAATACTTTCTATAATAGTGTCACTTTGCATGGATTCAAATTCTTATTC
GAGAAGAGCTCAATGCTTCGTAAGGGTGTTTGGTTTCTAATCATCATGGT
TGCTTTTATGTGTTCTATTGCTTTATTCTTTGACCTCGTGGGTGATTTTC
TTGAACGCAAAACGAACATTGATACTATTGAATATTATGAAGAAAACCAT
GAATTTCCAACACTGACCATTTGTCCTTACGACTCACAGTCTAAACAAAA
ATTAAACAATTTAACAGTCAATTACACTAAGGCTGATTTTCTGGACCTCG
TCCAACGTATTTCACAACCAACCAGCGAGAATCTTTCTCTTACACCGGAA
ATCCAAAATTTTCTAAAAGAGTTAGACACACGTAATGTTAAAAACTACAT
GGAGCTATTAAGTATGTATAATATGGACTTCAAAGATCTCATCGATAACA
GAGTATATTTGAACAATGAAACCTGTCAATATTACAGCAAATATTGCAGT
AAACAGGACTTCGAGACGGTCATTTGGAATAACCATCAAACCTGTATCGA
ATTCAATTCATTCATTTCCGGTAAACCGAGTCTTGTTGTTGGTAAAATCG
ATAATCGGTTCCGAGGATTTCAATTGTATTTGGATCTCGGACAAACGTCT
TATTTTCGGACAGCTGATTTGCACGGTGTCATGGTGATGATTAACAAGTT
TGGAAATGCCCATCATTTGCTACCAGATAAGTCGTACGTTAGTGTCAAAC
CAGGCGAGATGGCTTTCATTAAATTGAAAGAATATGAGCATCGGTTGGAG
GAGGAGTTGGTTTGGGACTTGGTTTTAGTTTCATTACAGCGTTCGAATTC
GTTTTCTTTATTTATGATTACATTAAACTTTCATTGAGAAGGGTCATGTC
AAGCAGAAAAGAAAGACGAGACGTTATTCAAGTCGTCAAAATGAATATGA
ACGCCGATTGAAGAGAATATTGTTGGTATACATGTTTCATTTTTTGATAA
TATCATCATCAAAGAAAAGATGATACCTTCAGTTCGATGGACCTGTCTAA
TCGCATTGTTTATGGAAAAAAAGTACAAAGATTGTTTCAACCAATGTCCT
CAAGAATGCACTCAAACAACATATAAAGTGAAAAAAGCCACAGTAATGAT
CGGTAGCGATGAAGTGTACAAAAACATCCAGAGAACTGTCCCCTCGAAAG
CCAACATGACCCTGACTGAGATTAAAGAATATTTCAGGTGTGAAATTATG
CACACTTGAAAAAATGATTTGCTACAACTATTACAAAGTCATCACTGCTA
CCACCTCCTTACCATTCGAACTGTGGTACCAGAGAGTATCATTTAATCAA
CAAGAAAAGACCATATACCAACACTCTGTGTAAATTTGATTGTATAACCA
ATCATGTGTACCAAAAATGTGGCTGCGTGGGGGATGAAATGAAACATATC
AAAAAACGAAATGGTTCATTATCGTTGGTTAGTGCGGAAATTCCGTGGCT
GGAGGTCAATGTCGAGTTACAACTGCAATGAAAAAGAAATGGAATCCCAG
AAAGTGGAAAAAACTGAAAATGTTGGCAACGACAAAGAGGAACTCTTTAA
TACTTTCTATAATAGTGTCACTTTGCATGGATTCAAATTCTTATTCGAGA
AGAGCTCAATGCTTCGTAAGGGTGTTTGGTTTCTAATCATCATGGTTGCT
TTTATGTGTTCTATTGCTTTATTCTTTGACCTCGTGGGTGATTTTCTTGA
ACGCAAAACGAACATTGATACTATTGAATATTATGAAGAAAACCATGAAT
TTCCAACACTGACCATTTGTCCTTACGACTCACAGTCTAAACAAAAATTA
AACAATTTAACAGTCAATTACACTAAGGCTGATTTTCTGGACCTCGTCCA
ACGTATTTCACAACCAACCAGCGAGAATCTTTCTCTTACACCGGAAATCC
AAAATTTTCTAAAAGAGTTAGACACACGTAATGTTAAAAACTACATGGAG
CTATTAAGTATGTATAATATGGACTTCAAAGATCTCATCGATAACAGAGT
ATATTTGAACAATGAAACCTGTCAATATTACAGCAAATATTGCAGTAAAC
AGGACTTCGAGACGGTCATTTGGAATAACCATCAAACCTGTATCGAATTC
AATTCATTCATTTCCGGTAAACCGAGTCTTGTTGTTGGTAAAATCGATAA
TCGGTTCCGAGGATTTCAATTGTATTTGGATCTCGGACAAACGTCTTATT
TTCGGACAGCTGATTTGCACGGTGTCATGGTGATGATTAACAAGTTTGGA
AATGCCCATCATTTGCTACCAGATAAGTCGTACGTTAGTGTCAAACCAGG
CGAGATGGCTTTCATTAAATTGAAAGAATATGAGCATCGGTTGGAGGAGG
AGTTGGTTTGGGACTTGGTTTTAGTTTCATTACAGCGTTCGAATTCGTTT
TCTTTATTTATGATTACATTAAACTTTCATTGAGAAGGGTCATGTCAAGC
AGAAAAGAAAGACGAGACGTTATTCAAGTCGTCAAAATGAATATGAACGC
CGATTGAAGAGAATATTGTTGGTATACATGTTTCATTTTTTGATAATATC
ATCATCAAAGAAAAGATGATACCTTCAGTTCGATGGACCTGTCTAATCGC
ATTGTTTATGGAAAAAAAGTACAAAGATTGTTTCAACCAATGTCCTCAAG
AATGCACTCAAACAACATATAAAGTGAAAAAAGCCACAGTAATGATCGGT
AGCGATGAAGTGTACAAAAACATCCAGAGAACTGTCCCCTCGAAAGCCAA
CATGACCCTGACTGAGATTAAAGAATATTTCAGGTGTGAAATTATGCACA
CTTGAAAAAATGATTTGCTACAACTATTACAAAGTCATCACTGCTACCAC
CTCCTTACCATTCGAACTGTGGTACCAGAGAGTATCATTTAATCAACAAG
AAAAGACCATATACCAACACTCTGTGTAAATTTGATTGTATAACCAATCA
TGTGTACCAAAAATGTGGCTGCGTGGGGGATGAAATGAAACATATCAAAA
AACGAAATGGTTCATTATCGTTGGTTAGTGCGGAAATTCCGTGGCTGGAG
GTCAATGTCGAGTTACAACTGCAATGAAAAAGAAATGGAATCCCAGAAAG
TGGAAAAAACTGAAAATGTTGGCAACGACAAAGAGGAACTCTTTAATACT
TTCTATAATAGTGTCACTTTGCATGGATTCAAATTCTTATTCGAGAAGAG
CTCAATGCTTCGTAAGGGTGTTTGGTTTCTAATCATCATGGTTGCTTTTA
TGTGTTCTATTGCTTTATTCTTTGACCTCGTGGGTGATTTTCTTGAACGC
AAAACGAACATTGATACTATTGAATATTATGAAGAAAACCATGAATTTCC
AACACTGACCATTTGTCCTTACGACTCACAGTCTAAACAAAAATTAAACA
ATTTAACAGTCAATTACACTAAGGCTGATTTTCTGGACCTCGTCCAACGT
ATTTCACAACCAACCAGCGAGAATCTTTCTCTTACACCGGAAATCCAAAA
TTTTCTAAAAGAGTTAGACACACGTAATGTTAAAAACTACATGGAGCTAT
TAAGTATGTATAATATGGACTTCAAAGATCTCATCGATAACAGAGTATAT
TTGAACAATGAAACCTGTCAATATTACAGCAAATATTGCAGTAAACAGGA
CTTCGAGACGGTCATTTGGAATAACCATCAAACCTGTATCGAATTCAATT
CATTCATTTCCGGTAAACCGAGTCTTGTTGTTGGTAAAATCGATAATCGG
TTCCGAGGATTTCAATTGTATTTGGATCTCGGACAAACGTCTTATTTTCG
GACAGCTGATTTGCACGGTGTCATGGTGATGATTAACAAGTTTGGAAATG
CCCATCATTTGCTACCAGATAAGTCGTACGTTAGTGTCAAACCAGGCGAG
ATGGCTTTCATTAAATTGAAAGAATATGAGCATCGGTTGGAGGAGGAGTT
GGTTTGGGACTTGGTTTTAGTTTCATTACAGCGTTCGAATTCGTTTTCTT
TATTTATGATTACATTAAACTTTCATTGAGAAGGGTCATGTCAAGCAGAA
AAGAAAGACGAGACGTTATTCAAGTCGTCAAAATGAATATGAACGCCGAT
TGAAGAGAATATTGTTGGTATACATGTTTCATTTTTTGATAATATCATCA
TCAAAGAAAAGATGATACCTTCAGTTCGATGGACCTGTCTAATCGCATTG
TTTATGGAAAAAAAGTACAAAGATTGTTTCAACCAATGTCCTCAAGAATG
CACTCAAACAACATATAAAGTGAAAAAAGCCACAGTAATGATCGGTAGCG
ATGAAGTGTACAAAAACATCCAGAGAACTGTCCCCTCGAAAGCCAACATG
ACCCTGACTGAGATTAAAGAATATTTCAGGTGTGAAATTATGCACACTTG
AAAAAATGATTTGCTACAACTATTACAAAGTCATCACTGCTACCACCTCC
TTACCATTCGAACTGTGGTACCAGAGAGTATCATTTAATCAACAAGAAAA
GACCATATACCAACACTCTGTGTAAATTTGATTGTATAACCAATCATGTG
TACCAAAAATGTGGCTGCGTGGGGGATGAAATGAAACATATCAAAAAACG
AAATGGTTCATTATCGTTGGTTAGTGCGGAAATTCCGTGGCTGGAGGTCA
ATGTCGAGTTACAACTGCAATGAAAAAGAAATGGAATCCCAGAAAGTGGA
AAAAACTGAAAATGTTGGCAACGACAAAGAGGAACTCTTTAATACTTTCT
ATAATAGTGTCACTTTGCATGGATTCAAATTCTTATTCGAGAAGAGCTCA
ATGCTTCGTAAGGGTGTTTGGTTTCTAATCATCATGGTTGCTTTTATGTG
TTCTATTGCTTTATTCTTTGACCTCGTGGGTGATTTTCTTGAACGCAAAA
CGAACATTGATACTATTGAATATTATGAAGAAAACCATGAATTTCCAACA
CTGACCATTTGTCCTTACGACTCACAGTCTAAACAAAAATTAAACAATTT
AACAGTCAATTACACTAAGGCTGATTTTCTGGACCTCGTCCAACGTATTT
CACAACCAACCAGCGAGAATCTTTCTCTTACACCGGAAATCCAAAATTTT
CTAAAAGAGTTAGACACACGTAATGTTAAAAACTACATGGAGCTATTAAG
TATGTATAATATGGACTTCAAAGATCTCATCGATAACAGAGTATATTTGA
ACAATGAAACCTGTCAATATTACAGCAAATATTGCAGTAAACAGGACTTC
GAGACGGTCATTTGGAATAACCATCAAACCTGTATCGAATTCAATTCATT
CATTTCCGGTAAACCGAGTCTTGTTGTTGGTAAAATCGATAATCGGTTCC
GAGGATTTCAATTGTATTTGGATCTCGGACAAACGTCTTATTTTCGGACA
GCTGATTTGCACGGTGTCATGGTGATGATTAACAAGTTTGGAAATGCCCA
TCATTTGCTACCAGATAAGTCGTACGTTAGTGTCAAACCAGGCGAGATGG
CTTTCATTAAATTGAAAGAATATGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002570XLOC_002570Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004576-proteinTCONS_00004576-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004576-exon-sc0000045-1575043694:825588..826634TCONS_00004576-exon-sc0000045-1575043694:825588..826634Clytia hemisphaericaexon
TCONS_00004576-exon-sc0000045-1575043694:824516..824687TCONS_00004576-exon-sc0000045-1575043694:824516..824687Clytia hemisphaericaexon
TCONS_00004576-exon-sc0000045-1575043694:821403..821453TCONS_00004576-exon-sc0000045-1575043694:821403..821453Clytia hemisphaericaexon
TCONS_00004576-exon-sc0000045-1575043694:819242..819425TCONS_00004576-exon-sc0000045-1575043694:819242..819425Clytia hemisphaericaexon
TCONS_00004576-exon-sc0000045-1575043694:818836..818927TCONS_00004576-exon-sc0000045-1575043694:818836..818927Clytia hemisphaericaexon
TCONS_00004576-exon-sc0000045-1575043694:817656..818292TCONS_00004576-exon-sc0000045-1575043694:817656..818292Clytia hemisphaericaexon
TCONS_00004576-exon-sc0000045-1510915933:825588..826634TCONS_00004576-exon-sc0000045-1510915933:825588..826634Clytia hemisphaericaexon
TCONS_00004576-exon-sc0000045-1510915933:824516..824687TCONS_00004576-exon-sc0000045-1510915933:824516..824687Clytia hemisphaericaexon
TCONS_00004576-exon-sc0000045-1510915933:821403..821453TCONS_00004576-exon-sc0000045-1510915933:821403..821453Clytia hemisphaericaexon
TCONS_00004576-exon-sc0000045-1510915933:819242..819425TCONS_00004576-exon-sc0000045-1510915933:819242..819425Clytia hemisphaericaexon
TCONS_00004576-exon-sc0000045-1510915933:818836..818927TCONS_00004576-exon-sc0000045-1510915933:818836..818927Clytia hemisphaericaexon
TCONS_00004576-exon-sc0000045-1510915933:817656..818292TCONS_00004576-exon-sc0000045-1510915933:817656..818292Clytia hemisphaericaexon
TCONS_00004576-exon-sc0000045-1491911889:825588..826634TCONS_00004576-exon-sc0000045-1491911889:825588..826634Clytia hemisphaericaexon
TCONS_00004576-exon-sc0000045-1491911889:824516..824687TCONS_00004576-exon-sc0000045-1491911889:824516..824687Clytia hemisphaericaexon
TCONS_00004576-exon-sc0000045-1491911889:821403..821453TCONS_00004576-exon-sc0000045-1491911889:821403..821453Clytia hemisphaericaexon
TCONS_00004576-exon-sc0000045-1491911889:819242..819425TCONS_00004576-exon-sc0000045-1491911889:819242..819425Clytia hemisphaericaexon
TCONS_00004576-exon-sc0000045-1491911889:818836..818927TCONS_00004576-exon-sc0000045-1491911889:818836..818927Clytia hemisphaericaexon
TCONS_00004576-exon-sc0000045-1491911889:817656..818292TCONS_00004576-exon-sc0000045-1491911889:817656..818292Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000045supercontigsc0000045:817656..826634 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.1054	0.0562399	0.0716038	0.136602	0.426415	0.34329	3.50057	3.68785	2.21048	1.72589	1.00147	2.37727	0.133357	0.14041	0.227785	0.435008	0.351737	0.437913	0.288275	0.147569	1.18223	1.38957	1.25672	1.02955	0.495255	0.712768	0.271083	0.191784	0.478754	0.502892
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001873ENaC
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005272sodium channel activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006814 sodium ion transport
cellular_component GO:0016020 membrane
molecular_function GO:0005272 sodium channel activity
Blast
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BLAST of TCONS_00004576 vs. Swiss-Prot (Human)
Match: ASIC2 (Acid-sensing ion channel 2 OS=Homo sapiens GN=ASIC2 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.013e-18
Identity = 128/511 (25.05%), Postives = 220/511 (43.05%), Query Frame = 1 
Query:  217 VEKTENVGNDKEELFNTFYNSVTLHGFKFLFEKSSM-LRKGVWFLIIMVAFMCSIALFF----DLVGDFLERKTNIDTIEYYEENHEFPTLTICPYDSQSKQKLNNLTVN--YTKADFLDLVQRISQPTSENLSLTPEIQNFLKELDTRNVKNY-------MELLSMYNMDFKDLIDNRVYLNNETCQYYSKYCSKQDFETVIWNNHQTCIEFNSFISGKPSLVVGKIDNRFRGFQLYLDLGQTSYF-------RTADLHGVMVMINKFGNAHHLLPDKSYVSVKPGEMAFIKLKEYESSLLPPPYHSNCGTREYHLINKKRPYTNTLCKFDCITNHVYQKCGCVGDEMKHIKKRSVKLCTLEKMI-CYNYYKALFMEKKYKDCFNQCPQECTQTTYKVKKATVMIGSDEVYKNIQRTVPSKANMTLTEIKEYFRENIVGIHVSFFDNI---IIKEKMIPSVRWTCLIAXXXXXXXXXXXXXXITAFEFVFFIYDYIKLSLRRVMSSRKER 1674
            ++++ + G+ +      F N+ TLHG + +F    + +R+ +W     VAF+ S+ L      + V  +   +      E   ++  FP +T+C   + +  + + LT N  Y   + L L+    Q    +L+  P +   L++    N K+Y       +E L     D KD++   +Y     C++  + C  QDF T ++  +  C  FNS   GKP L   K      G ++ LD+ Q  Y         T    GV V I+       +   +    V PG   F+  +E   + LPPP+   C + E  L +    Y+ T C+ DC T ++ + C C    M H+   +   CT E+   C      L  EK    C  + P  C  T Y  + + V I S    K +++    K N +    ++Y  ENI+ + + FF+ +    I++K    V    L+  +GG +GL +G S +T  E   +IY+ IK  L  ++   ++ 
Sbjct:    3 LKESPSEGSLQPSSIQIFANTSTLHGIRHIFVYGPLTIRRVLW----AVAFVGSLGLLLVESSERVSYYFSYQHVTKVDEVVAQSLVFPAVTLC---NLNGFRFSRLTTNDLYHAGELLALLDVNLQIPDPHLA-DPSVLEALRQ--KANFKHYKPKQFSMLEFLHRVGHDLKDMM---LY-----CKFKGQECGHQDF-TTVFTKYGKCYMFNSGEDGKPLLTTVK-GGTGNGLEIMLDIQQDEYLPIWGETEETTFEAGVKVQIHSQSEPPFI--QELGFGVAPGFQTFVATQEQRLTYLPPPW-GECRSSEMGL-DFFPVYSITACRIDCETRYIVENCNC---RMVHMPGDA-PFCTPEQHKECAEPALGLLAEKDSNYCLCRTP--CNLTRYNKELSMVKIPSKTSAKYLEK----KFNKS----EKYISENILVLDI-FFEALNYETIEQKKAYEV--AALLGDIGGQMGLFIGASILTILELFDYIYELIKEKLLDLLGKEEDE 472
The following BLAST results are available for this feature:
BLAST of TCONS_00004576 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASIC21.013e-1825.05Acid-sensing ion channel 2 OS=Homo sapiens GN=ASIC... [more]
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