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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004583 ID=TCONS_00004583|Name=TCONS_00004583|organism=Clytia hemisphaerica|type=transcript|length=952bp
CGTTACAGCATCTTTTTAACACTCAAGGCATGGGCataatctttctttca
ggtcTCCTCGACAATGAAAAATGCTCCTAAACCATCATTCTTTTAGGAAG
CCATATTCTCTAAGACCATgtttcagacgttacggtttcgtattGCTAGT
ACGGTATGGTTTACATTACCGAGCAGGAGTGTTCGTATTGGTTCTAGAAC
GTTTCGGAGCGAGAAAACGGAGCTGTTCCGTTCCGATAAAAAACCGAAAC
CGTTTGGATCAGTTTTGCTTTGTAATGTCTTTATTTTtaacgtttcgaat
tttgacgttcacacttgtttcggaacagTTTCGTGGCGGAAcgatacgga
accgtaacgtctgaacatggccTAAAAGCTAAGACTTCAAATCATATAAA
TTGCTTTGCAGCCACCTGAAAAATACATCATTGTAGCCATAGACAGGTTC
GCATTcatatgaaattttgtttgccttcatttttcaaaaaacatgtTAAA
AGCCTTCCTGGTAGAGGAAAATTGTCCAATTTTAGCGAcaacaaaaaaaa
tgttaagcATTATGATATGAtcctttaaaaaatttgaaccaaaaccTTTA
AGTTGACAAGGTAAAACCTGGCTACCTCAGACTTGTAAATTCTCCTGTAA
GTTTGTAATGACTTTTTGAAAGGACAAAGAATTTTTACTCACTTTAGCAT
TATGAGTAAACTTCATCATCATTCCCAAATTCTAAACTGCCTGAACCGCC
AGGGTTAAATGCCAGTTTAAGACAACAtgtattttttcataagcatacaa
aaattcgaaaacagGCTTGGGATGCTTAGGTCGTGGTCGCTTATAAGGAT
GCATATTCCAGGctaaattttagagaaattctGAATATCCGTAGAATTCG
AgccaaaaatagccaaaatcaggaaaatatgtttttcgtAGGCTCATGGT
AT Run BLAST on NCBI transcript from alignment at sc0000045:200355..201306 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004583 ID=TCONS_00004583|Name=TCONS_00004583|organism=Clytia hemisphaerica|type=transcript|length=952bp|location=Sequence derived from alignment at sc0000045:200355..201306 (Clytia hemisphaerica)
ATACCATGAGCCTacgaaaaacatattttcctgattttggctatttttgg
cTCGAATTCTACGGATATTCagaatttctctaaaatttagCCTGGAATAT
GCATCCTTATAAGCGACCACGACCTAAGCATCCCAAGCctgttttcgaat
ttttgtatgcttatgaaaaaatacaTGTTGTCTTAAACTGGCATTTAACC
CTGGCGGTTCAGGCAGTTTAGAATTTGGGAATGATGATGAAGTTTACTCA
TAATGCTAAAGTGAGTAAAAATTCTTTGTCCTTTCAAAAAGTCATTACAA
ACTTACAGGAGAATTTACAAGTCTGAGGTAGCCAGGTTTTACCTTGTCAA
CTTAAAggttttggttcaaattttttaaaggaTCATATCATAATgcttaa
cattttttttgttgTCGCTAAAATTGGACAATTTTCCTCTACCAGGAAGG
CTTTTAacatgttttttgaaaaatgaaggcaaacaaaatttcatatgAAT
GCGAACCTGTCTATGGCTACAATGATGTATTTTTCAGGTGGCTGCAAAGC
AATTTATATGATTTGAAGTCTTAGCTTTTAggccatgttcagacgttacg
gttccgtatcgTTCCGCCACGAAActgttccgaaacaagtgtgaacgtca
aaattcgaaacgttaAAAATAAAGACATTACAAAGCAAAACTGATCCAAA
CGGTTTCGGTTTTTTATCGGAACGGAACAGCTCCGTTTTCTCGCTCCGAA
ACGTTCTAGAACCAATACGAACACTCCTGCTCGGTAATGTAAACCATACC
GTACTAGCaatacgaaaccgtaacgtctgaaacATGGTCTTAGAGAATAT
GGCTTCCTAAAAGAATGATGGTTTAGGAGCATTTTTCATTGTCGAGGAga
cctgaaagaaagattatGCCCATGCCTTGAGTGTTAAAAAGATGCTGTAA
CG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004583-exon-sc0000045-1491911889:200355..201306 | TCONS_00004583-exon-sc0000045-1491911889:200355..201306 | Clytia hemisphaerica | exon |
| TCONS_00004583-exon-sc0000045-1510915933:200355..201306 | TCONS_00004583-exon-sc0000045-1510915933:200355..201306 | Clytia hemisphaerica | exon |
| TCONS_00004583-exon-sc0000045-1575043694:200355..201306 | TCONS_00004583-exon-sc0000045-1575043694:200355..201306 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000045 | supercontig | sc0000045:200355..201306 . |
Blast
The following BLAST results are available for this feature:
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