TCONS_00004699 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004699
Unique NameTCONS_00004699
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length697

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004699 ID=TCONS_00004699|Name=TCONS_00004699|organism=Clytia hemisphaerica|type=transcript|length=697bp
GTCGTCTCTAACCAAGAAAGACAGAAAGAAGCAGAAGATGAAGGAATTGA
ATTGATGGGAATCAAGTTTTATGGAACACCATGGCATCCAGAGCACCGTG
TAGGAGATGCTTTCTCAGTCAAGTGTGGTGAAGAATGTCTTTCTAAATGG
GAAAAAATACCTTTCGACACTGATGTCCTCATGACTCATACACCGCCTTA
TGGTCTTTGTGATGAAGGTCACCATATTAAGCACGCTGGATGTCCAGAAT
TGTTGTATATTGTCCAAGAGAAGATCAAACCGAGAATCCATGCGTTTGGA
CACATTCATGAAGCATACGGCATTGCCAAGGATAAAACGACAACGTATCT
CAACGCATCGATTTGTACACGCCGTTATCGGTCAGACAATTTACCGTTTG
TCATCGATTTGAAGCCTAtcgagaaaaaaactgtcgaTTTCTTACCGAAT
GTTCTGGATGGGATTGAAACGATTTAAATCAGGTGATGTTGATTCTCTTA
TCTAAGATTGgagatttgtcaaaaaataaatatccCAATGGTGACCATGT
TTCAGCATCCAATACGAAGTCGATTAACTCATTTATTGGATATTATTGGT
GTGTGCAACCTCAATTACGCtctttttttgtaagcataacATTTATAAGC
ATGCTTAGGCTCAAACTCggtaaaaaaataagcataatacTAAGCAT
Run BLAST on NCBI

protein sequence of TCONS_00004699-protein

>TCONS_00004699-protein ID=TCONS_00004699-protein|Name=TCONS_00004699-protein|organism=Clytia hemisphaerica|type=polypeptide|length=158bp
VVSNQERQKEAEDEGIELMGIKFYGTPWHPEHRVGDAFSVKCGEECLSKW
EKIPFDTDVLMTHTPPYGLCDEGHHIKHAGCPELLYIVQEKIKPRIHAFG
HIHEAYGIAKDKTTTYLNASICTRRYRSDNLPFVIDLKPIEKKTVDFLPN
VLDGIETI
Run BLAST on NCBI

transcript from alignment at sc0000047:571155..581108-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004699 ID=TCONS_00004699|Name=TCONS_00004699|organism=Clytia hemisphaerica|type=transcript|length=9954bp|location=Sequence derived from alignment at sc0000047:571155..581108- (Clytia hemisphaerica)
GTCGTCTCTAACCAAGAAAGACAGAAAGAAGCAGGTATGAGGTAGAGCAG
TCAATTTCTTTTTCTCTCGGTTGTCAGTTTCTCTACGTAAATTTGTTTCA
TCAATAATTTCGAGCTAGTTTCGTTAGGTTTAACAATTAAAATGAAATTT
TATTTCATTGCATAGGGCTGTTTTATTTTTGCATCAAAATAGGGTAGGCC
AGGCAGATAGGACAACTGTAGCTTAGGATAGAGGACCCTACAACTTAACC
GCACAACACGCCCTACCCTTAGGGGTAGGCTGAGTTTATCTATATGTTAA
TAGCAATAGTCTGTTCTCCTGTTTTGTATGTTTTTTTTCTGTTTTCTGTG
TGTAAAGACAACTATAACATAACATCCAAAGAAAGGTCAAAGGACTTTTA
GTGTGTTCAGCTACAGCTTAACTGGTGGTCATTACATATTATGTATTAAT
AAAATTGTTTAAAAATTATGGTCATGATGTGTGGCTAATCAAAAGTGCTT
TTTACCGTTAAATCTTTTCTTTATCTTTATTTAAAGAAATTTTAACAAAA
AATAGAAAAAGTATTTAATCTGTGCGTTAAAAAGATATGATCAATTCCAA
TGTCTCAAATTAAACAATGGACAAAGTTAGAGAAGCTGGGAGGGGGACTA
AGTAGGGGAAGGTTTATATGAGAGGTTTTTGAATAGACTTTTTAATACAG
TAATCTTGACGACACTATAAGGATATGAGCAAAAGAGGGTGTCAAAGGCA
GTTAGTCACACTAGCGTTCAAATAAAAGGGGGGGTTGGGCAATTTTCGAA
ATTTTAATAAACAGGAGGGACTTAATAGGAAAGGGGGGGCTGGAAATTGT
ACTTCTGAAAACCCAAAAATAAGGTAAATATAGGTTAATATCAGGCTTTT
TGGAGTAAAATAAGGGGGCTTCTTTTTGCCAACTGAAAATATTCCTAAAA
ATTAATAAACGGGGGAGGGTCCTAATAAGGTCCGGGGGTGGGAAAATTTT
TCGAAAAATTAACAAGCGGGGGGCCCGTTTATTTGGCACCTAAGAGTACA
TGTGCGGATTTATTTTTACTTTTTAGTATATAAATAAGGCCTTAAAACAA
AGCGCTGTCTCTGGAATTGAATGACAAAATTTGGTTGGTTGATATTCTGG
CTGCTGCACGTTCGCAATCGATCATTTTGTCTCATTTAAAGTTTTCAAGT
TTTAATCAATCGTCTTTGGAACTTGAACTTGATTCAGGTAACTCTCATCC
TTGTTGATGCAAATACATCATGTAGATGACTGATGTTGTTTTTCTGAGAG
CTTGATCTCCTAGTGTGACTAACTGAAAGGAGACATATGTGTGCAATGAC
GAAAACAGGATCATTTCGAAATGTAAAAAGAATTATTGGCAAAAATATAT
AATTGAACATGCATCCCATGGGTATGCATTAAGATTACAACTGAGTGTAT
CTGACCTTTTTGAATGACGGGCGTCCTGTCTACCCCTGTTTTGATGACGG
AATCAAAAGCCTAATACCGTTGAACAAGTGGTATTTATACAAGGAGGTTA
CCTGGCAAACCTCAACACCATTGGGAGCACAGTGACCTGAACCAAATCCA
GATCTAACTGGATCTTTGACCTTAGGGAAAGGATCTAAGTAACTGACTAC
TGGGCCCGTCTGTAAAATACATGATACCAGCAGGTGGCTAAAAATTGATC
CTGTGATCAAAAATACATGTCACATGGAGTTGCCTCACAAAATTTGAGAA
AACATACCTATATAAAAAAGAAGAAAATAAAAAAATATTGAGGAAGGAGG
GTCCTATTTTCGGCATTTTCAAAGAATGATGACGTTACCAAATATTTGAT
GCAAAATTTAAAGTAATTTTAATAAAAATTTCAAAAGTTACCAAAACTTT
AGTGCTTTTTTGCGGGTGGTGCATCTAGGTTCAAAGCACGAGTGGAGCTC
ACTTGATTCAAAAAAGGTTGCTCCTTAATTTTAATGTGATAAAAGTTTGA
AACAGTGATGAAAATCAATCAGTGATTTCAATTTCTTATAGATTTGACAT
TTTGACTCTCTCATACATAAACATATGTTGAATTACCATGATTAGACTTA
CTGAAATAAAAAGAATCGAAAAATTGTTGAGTTTTAATAAACGGGGGGGA
GGGGGGGTGGTTCTTGCTGCGGGTACAAGGGTTGGATACTCCAAAAACCA
AAAATAAGTTAAATCTAGTTAAAATTAGACAACATACACATGGAGCAAAA
TAAGGTACTTTTCTTTAGTTGGCTACTTTAAACGGGATTAAATTTAGTGG
ATGACTGATTATGAGATAATATTTTTACAATTTCGTGCCATTCTACTGCC
AAACTATTCATGTTGGTTGTGAAATAAGCATTATTAGCGCTTCTATCTAT
CATGGCGTTAAACATGCTAAAAGTGGTTTTTTGACATTTTTTGGAATTTA
ATTTGAAAAAATTTAGCGCATAAGACCTTTTCAAATTTTCACTGGGACTT
ATTTTATGTTGTCATCCACAAAATCCGCGAAATCCAATTAATCCCATCAA
ACTATTATGAAAATGACTAAATTGTGGATTCTAATAAGATGGGAGAAGTT
TGGACTGGAAAAAGACTGGGGGACTGCTTCTTAAGCGCTTGTGTAACTTT
TTGAAATTGCTAGCACACTGCCTCACCTTGGCTAGGTTTGAAAGAGCCTG
TTTATGTTTACTTTAGTGGGTAAGGTAAGTATCTCATTTAAAAAGCTAAT
TCAATTTAAAATAGAATAATTGAAATTAAATGGCTACTGCCTTAACCCAT
TAGTATGGAGAAAACGATCACTCTATTTATTATTACTTTTGTAGCTAATA
AGATGAAAAAGGCATTGGGAAGTGTGCGCAGGCATNTGTGTAACTTTTTG
AAATTGCTAGCACACTGTCTCACCTTGGCTAGGTTTGAAAGATCCTGTTT
ATGTTTACTTTAGTGGGTAAGGTAAGTATCTCATTTAAAAAACTAATTCA
ATTTAAAATAGAATAGTTGAAATTAAATGGCTACTGCCTTAACCCATTTG
TATGGGAAAAAAAATCATTCTATTTATTATTACTTTTGTAGCTAATAAGA
TGAAAAAGGCATTGGGAAGTGTGCGCAGGCATTTTCAAAAATTAGACACA
GATAAAAATCACAGGGTGTCAGATTTGGGTGAATACTCTAAACCAAAGGA
TCCTAAAGATTCAGACTCTGTTCGAATTGTTATCATTTCTGATACTCATG
GTACAAAGAAAATCCCTGAGATTGTACCTGATGGTGACATTCTAATACAT
TGCGGTGACTTCACATTACATGGACGCTTAGTAGAAGTTGAATCATTCAA
TGAAATATTGGGTAGTATTAAACATAAGTTCAAACATATTTTGGTCATTG
CTGGGAACCACGAACTTATGATGGATCCATCTTTGAATGGTTCTAGACCA
GAAGAATGTCAACGGATTTTAAGTAATTGTACTTATTTAGAAGATGAAGG
AATTGAATTGATGGGAATCAAGTTTTATGGAACACCATGGTAGGTAATTC
TAGTGATCATGCTTGTTTATTTTATTTAAAAGTATCAAATATTTGTCTCT
CATTCAACTATGAAATTGTAATCTTCTATCAGAAAATAGTAAAAAGAGCA
CATAACACTCGGCTAAAAACTTTCCCCTTCGTTGTTTTCTTTCTAAGGTT
CTTAAAACTAAAGCCGTTCTAGATCTCCTAACTTAAGGGTGGAATATTTT
CATGTAAGATACTGCATTAGCACATCAAAGTTTCTTCAAAAAGACTTGTT
TGATTCTGCAAAAAAATAGTAAATTCTTGGGAATTTCTGCACTGTAGCTT
AAAGGTTTTGTTTTTAAATAAGAGTGTTATGGTTTGCTTACTCATCAGTT
TTAATTTACAAGCCTTTTGATATTCAATTGGCACGGATGTGGAGCAATAT
TAGTCAGAAAGAAGAAAAGAAAAACATTTGTTTGCTTATGTCAGCACAAT
ATAATAATAAGAAGACACTGTCCTGATATGAAACATGTGTCTGATATGAA
AATTCCTGTGTAAAATATTTTAAGTATTTAATATCAATGTCTTATTCTCA
GGCATCCAGAGCACCGTGTAGGAGATGCTTTCTCAGTCAAGTGTGGTGAA
GAATGTCTTTCTAAATGGGAAAAAATACCTTTCGACACTGATGTCCTCAT
GACTCATACACCGCCTTATGGTCTTTGTGATGAAGGTCACCATATTAAGC
ACGCTGGATGTCCAGAATTGTTGTATATTGTCCAAGAGAAGATCAAACCG
AGAATCCATGCGTTTGGACACATTCATGAAGGTATGGTTTTTGTTTTTAC
ATTTTGTTTAATTCGACTTTTTTCAAAGCTTATCTCTTTTTCTTTGCCAC
TTTTATCATTCATTTATTCAGTATTTTAAACTGGAAAATCATAATTTATT
CATTGGTCTTCTTGAACCTCCTTTATTCTTACACCCCAATTGGGGGTAAA
TATAACTGACTGAAACTCAATGGGGATATATAAGCTCGTTTATGAATGTT
TGTGTAACAATCTTGTGAATTTGTTGACTGCTTCTTTAGAATTCTGATAG
AACGAGAATACATTTGATATTTTCATGGAAGAAATATGGGATGTAAAGTA
CAAAAATGTAAAGAAAAACATACACGACATTACTGCAAGCTTTGCAAGGA
TAAAGATTCTCATCATTTTTGTAATCAATGTCCAGAAAGCCTTACACTGT
ATCATGGCACAGCTGAAAACTATCTTGGACCTATTACGAATTGGGGTCTT
GAACCAAGTAAAGGTGGACGCTTAGGTCCTGGAATTTATTTTGTTAAAGA
TTTAGATGAAGCTAAAAGTATCTCCAAAAACAAAGTTTCTAAAGGCCTCG
GTGGTGGTAAAGATGTTGTATTGCATTGTCGAGTGAACTTGGGTAAAGCA
GTAGACTTAGGGAACAATTCTGGATGCACCTGGCAAGGAAATCAGAACAA
TTATGATTCCGCAACTTCAATTCACCCTCCATGGGAAAGCTTACAAGGTA
GATGGGTTATTTCATATGCTTTCCCTGAATATTGTTTGAAAGATGAAAAG
AGATGTGTTATATGGGGTATAAGCATCGGTGATGAGACTGTTGAAAAAGC
TGATGGATATCGTTGGAAAGAGACTTTAAACATTGTCAAAGATATGAACC
AAGCAGCAGATAAACCAACCATTGATTCTAAAGTTAGAGAAATCACCAAT
TTTCTCGCCAATGGTACAGGACATACAAATAAGTTTCTACCGAGAGGGAC
AAACCGAAAATTCAGGAAGGCAATATCAAGCTTCACGTGTCAGGCTCGAT
TTCCTGATATATGTAGCTTAGCTTGTAGATATTGGTACACTACATTGAAA
GTAATTCTGTACTTGTTTTATTTTTGTAACACAATTGCATCTATCGTTCA
CTTGTTTGCTGACAGTAATGATGAGACGAAGCCAGCTTTGATATCATTCA
CCGTTTTCTTCACTCTTGTAACCTTATTGAAACTGCTTTATGTATTATTT
CATATGTTTTGTAAAGACAAAATGGAAGAAAGTGCTTTTGTTATGTTGGC
TGCAAATGTTTTAATTGCATTTTTCTTTGAAATGCCAATGTTAGTTTCAC
AAGGTTACGCTTTGAAGGACATTCCAAATATCGAATGGAAAGACCATGTT
CAGGATATGATGATACATTTCGAGTTCATGGTGAACTTCTTTATCACATC
ATTAATTGATTTTGTACTTTACAACATTGCTCTAAAGAAAGAGAAATCTT
GTTAAATTATTTGTTTCTAGCTATCATGTACACACCCATCGTCATATTTA
TCGCATGTGGGTAAAGGCCACATTTTTGGTACACCTGTCCCNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCACAATATTTTGAG
TAAATACTTTTTTCACTGTTGCTCAGGTTTTGCATTTTTCTAAAAAGCAT
GTTTTGCGACTCTGATCTTGTCCCTTCCGTTACGCGAATTCATTTTCAAG
GAAATCTTTGTCAAATAGCTATAGTTTATGTTAAATTCTCACAAGTTACC
ATTGGGATTACTCCAAATTCAATTTGCAAACCATTATCCTCCATTTTTGA
CATGTTTTTTCATTGACAGTCCTTCCCATTGGAAATGTGCCTTGGTTTTG
TCCCTTCCGTTACGCAAACATTAAATTGAACAGCATCTCAAGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTAAACTTTATATTAAC
AATGTGGTGGGAGTTATCTCCTTGGAAAATTTGATGTCCCTTCCGTTATG
GATGTCCCTTCCGTTACGCCTTTTTTTAAAAGGGAGTGTTACAGGGACTT
GGATGTTCCTTATAGTGTTTTTTTCTTCAAAGCAAAGATATCTGAAGTTA
TTGCATTGTTGAAAGACCTATTGTAGACTGTTCTCACATTTGCTACACTA
CAATGACTTCTTTTTATCTCTTAACCCTTAGGCTCCATNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAAAG
CTGGGGTCCCATCTCCCTAGGACTTTATTTAAAGGGAAAGAAACCAAATG
TTTTTGAAAGAGTATAAAATTACCTTTCCAATGGTACCAAAACAAGTGTC
TGAATCAAAAGCTACAAGCTTTTACGCCATTTTGAAATTTAAAAAAAAAT
CATTGAAATTTTTCAAAATTTTCAAAACTACTGCGCGCTCAAAGGGTTAA
CCAACAAATTTTTGATTTTTTTTTAAGACTCCAAACTGCTCAAAATACCT
GAAAATGACAATTAGGAGTTATTTGAAGTTGTTTTGACCATAAAAAATCT
TTACAAGGGGTCTCATTAACCCTTAGGCTCCATAGGACGTGTTTTCGCGT
CCTGAAACAGCCAAAATACCAAGTCCCAAAGCTTGGGTCTCAGCTCCCTA
GGACTTGATTTAAAGGGGAATAAACCCAATGCTTTTTGAAAGAGTATAGA
ATTACCTTTCCAATGGTTGGTACCACAACGAGTGTCTGAATCAAAAGCTA
CAAGCTTTTACGCCATTTTGAAGTTTCAAATTTCAAAAAAAAATCATTGA
AATTTTTCAATATTTTCAAAACTACTGCGCGCTCAAAGGGTTAACCANNG
GTCACCTACAGTGGGTCACCTAAATTTTAGGGATCATCTAAAACTTGGGA
TGAGGCTTGGATGGCCCAAAACAGAGCTATTTTCAAATTTTGAAAATTTT
GAATATTTCAGAAAATTTGTCCCTTTCGTTACGCTTATTCTATACAATTT
ACAATTTTTAGGAGTATTTGTAAGTTTATATAGTTAGTTCTGGTTAGTTC
TATCATTTTAGGTTAAATGACTATTAAAATTCAAACTATCTTTTGAAACA
AGTTTTTTCCTAGTGAAGATGTTAATTAAAAATTTGAAAGTTGTCCCTTC
CGTTACGCAAATTAGGCTACCCCTCCAACCCGAAAATGTTAATTCATGAA
AAACGATTAGGAATTAGTTTAAACACTTTGTAGAAACATTTTAAGAGTAA
GTTTAGTCTTATAAGTGTCTCTTTTTTATAGAAATAACAAGTTTTTAGTT
ATTGGTTGAAAATGAGAAAAAAATCAACCACAACAACTTCTAGGGTCCTA
CAGTTCTGCAAAAAGGTAATATAGAGGAGCACATACTTGATTATCATCAT
AGAGGTATATACACATCCAAATAAATAGGTTTTAAGCAATTTTGAGGATG
AAGTTTTTTTAGCGTAACGGAAGGGACAGGTGTACCAAAAATGTGGCCTT
TACCCATGTTCTATCTGTTATGCTCCCGTTTATGTGACACTAGCTGGATG
GGTTTATTTACCTGATGCTTTGATTGATCTCTATGGAGGACAAATTAAAG
GAGGTGTTACGTTTTTTTTGCAAATATCAATGTATGTTGGAGTTTTTGGG
CTTTGGACTTGGACAATTTTTTTGGGTATTTTAGCTCTTTTGATGATTAT
TGTATTACTTTGTTGCTGTTTGTGTACAAGCACCGCTATGCGAAATTAAT
AAAAATGATATTAGTATATTATGATATAGTATTTGGGTCATAGAACAATT
TACCGGACAAATTATATAATTCCAGTGATCTAAATTTTCCATTGAATTAT
CATATTCCCAACTTCAGTTGATCAGAATCTGACAATGTTTTAGTTTTAGC
TCCAAAACGAGACTCCAAAACTTTGGGGGTAGGCTTAAGACTTTAAAAAT
GATTGTGTTTCGGCTGAAATTTGGCCCACTAGTTCACTGGGTGAATATCT
GAGGGTGCTTTTTTCATTTTTTGGGACCTGGGGACAAGTTTTTCATCAAA
ACGAGGCTTTTGTTATTGGACTTATCACCTATCGATTATACAATTGGGCC
TACGAATGATTGAAAAATGCTGAAGTTGAGCCCAGTGCGGTCAGCACGAT
CGTCAGTTTGTATATTATATTATAAAAATATGCGAGTATAAATTAAATTA
CTTAATCGATACTTTGTATGATATTTTAATTAATTGGCAAAAAATAATCA
CCGGTTAAGAATTTCGTCCATTTTAAATAATTTTGTTAATTTTTATGAAT
AGTTTAGTTTTTAACCAATGTTACGTCGGCTTTTTAGAGCAATCATAAGG
CTGGAAAACGCCAATAAACTGAGCAATTATTGCAATTTTCTAGGTATAAT
TTTGTAAAATGAAACTGTAAAATATAGAAATGAAACTTTGAGTATGAAAT
TAACTTAAATTCTTTCATAGCATACGGCATTGCCAAGGATAAAACGACAA
CGTATCTCAACGCATCGATTTGTACACGCCGTTATCGGTCAGACAATTTA
CCGTTTGTCATCGATTTGAAGCCTATCGAGAAAAAAACTGTCGATTTCTT
ACCGAATGTTCTGGATGGGATTGAAACGATTTAAATCAGGTGATGTTGAT
TCTCTTATCTAAGATTGGAGATTTGTCAAAAAATAAATATCCCAATGGTG
ACCATGTTTCAGCATCCAATACGAAGTCGATTAACTCATTTATTGGATAT
TATTGGTGTGTGCAACCTCAATTACGCTCTTTTTTTGTAAGCATAACATT
TATAAGCATGCTTAGGCTCAAACTCGGTAAAAAAATAAGCATAATACTAA
GCAT

Coding sequence (CDS) from alignment at sc0000047:571155..581108-

>TCONS_00004699 ID=TCONS_00004699|Name=TCONS_00004699|organism=Clytia hemisphaerica|type=CDS|length=1908bp|location=Sequence derived from alignment at sc0000047:571155..581108- (Clytia hemisphaerica)
CATACGGCATTGCCAAGGATAAAACGACAACGTATCTCAACGCATCGATT
TGTACACGCCGTTATCGGTCAGACAATTTACCGTTTGTCATCGATTTGAA
GCCTATCGAGAAAAAAACTGTCGATTTCTTACCGAATGTTCTGGATGGGA
TTGAAACGATTTAAGCATCCAGAGCACCGTGTAGGAGATGCTTTCTCAGT
CAAGTGTGGTGAAGAATGTCTTTCTAAATGGGAAAAAATACCTTTCGACA
CTGATGTCCTCATGACTCATACACCGCCTTATGGTCTTTGTGATGAAGGT
CACCATATTAAGCACGCTGGATGTCCAGAATTGTTGTATATTGTCCAAGA
GAAGATCAAACCGAGAATCCATGCGTTTGGACACATTCATGAAGAAGATG
AAGGAATTGAATTGATGGGAATCAAGTTTTATGGAACACCATGGTCGTCT
CTAACCAAGAAAGACAGAAAGAAGCAGCATACGGCATTGCCAAGGATAAA
ACGACAACGTATCTCAACGCATCGATTTGTACACGCCGTTATCGGTCAGA
CAATTTACCGTTTGTCATCGATTTGAAGCCTATCGAGAAAAAAACTGTCG
ATTTCTTACCGAATGTTCTGGATGGGATTGAAACGATTTAAGCATCCAGA
GCACCGTGTAGGAGATGCTTTCTCAGTCAAGTGTGGTGAAGAATGTCTTT
CTAAATGGGAAAAAATACCTTTCGACACTGATGTCCTCATGACTCATACA
CCGCCTTATGGTCTTTGTGATGAAGGTCACCATATTAAGCACGCTGGATG
TCCAGAATTGTTGTATATTGTCCAAGAGAAGATCAAACCGAGAATCCATG
CGTTTGGACACATTCATGAAGAAGATGAAGGAATTGAATTGATGGGAATC
AAGTTTTATGGAACACCATGGTCGTCTCTAACCAAGAAAGACAGAAAGAA
GCAGCATACGGCATTGCCAAGGATAAAACGACAACGTATCTCAACGCATC
GATTTGTACACGCCGTTATCGGTCAGACAATTTACCGTTTGTCATCGATT
TGAAGCCTATCGAGAAAAAAACTGTCGATTTCTTACCGAATGTTCTGGAT
GGGATTGAAACGATTTAAGCATCCAGAGCACCGTGTAGGAGATGCTTTCT
CAGTCAAGTGTGGTGAAGAATGTCTTTCTAAATGGGAAAAAATACCTTTC
GACACTGATGTCCTCATGACTCATACACCGCCTTATGGTCTTTGTGATGA
AGGTCACCATATTAAGCACGCTGGATGTCCAGAATTGTTGTATATTGTCC
AAGAGAAGATCAAACCGAGAATCCATGCGTTTGGACACATTCATGAAGAA
GATGAAGGAATTGAATTGATGGGAATCAAGTTTTATGGAACACCATGGTC
GTCTCTAACCAAGAAAGACAGAAAGAAGCAGCATACGGCATTGCCAAGGA
TAAAACGACAACGTATCTCAACGCATCGATTTGTACACGCCGTTATCGGT
CAGACAATTTACCGTTTGTCATCGATTTGAAGCCTATCGAGAAAAAAACT
GTCGATTTCTTACCGAATGTTCTGGATGGGATTGAAACGATTTAAGCATC
CAGAGCACCGTGTAGGAGATGCTTTCTCAGTCAAGTGTGGTGAAGAATGT
CTTTCTAAATGGGAAAAAATACCTTTCGACACTGATGTCCTCATGACTCA
TACACCGCCTTATGGTCTTTGTGATGAAGGTCACCATATTAAGCACGCTG
GATGTCCAGAATTGTTGTATATTGTCCAAGAGAAGATCAAACCGAGAATC
CATGCGTTTGGACACATTCATGAAGAAGATGAAGGAATTGAATTGATGGG
AATCAAGTTTTATGGAACACCATGGTCGTCTCTAACCAAGAAAGACAGAA
AGAAGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002648XLOC_002648Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004699-exon-sc0000047-1575043694:581075..581108TCONS_00004699-exon-sc0000047-1575043694:581075..581108Clytia hemisphaericaexon
TCONS_00004699-exon-sc0000047-1575043694:577570..577618TCONS_00004699-exon-sc0000047-1575043694:577570..577618Clytia hemisphaericaexon
TCONS_00004699-exon-sc0000047-1575043694:576778..577007TCONS_00004699-exon-sc0000047-1575043694:576778..577007Clytia hemisphaericaexon
TCONS_00004699-exon-sc0000047-1575043694:571155..571538TCONS_00004699-exon-sc0000047-1575043694:571155..571538Clytia hemisphaericaexon
TCONS_00004699-exon-sc0000047-1510915933:581075..581108TCONS_00004699-exon-sc0000047-1510915933:581075..581108Clytia hemisphaericaexon
TCONS_00004699-exon-sc0000047-1510915933:577570..577618TCONS_00004699-exon-sc0000047-1510915933:577570..577618Clytia hemisphaericaexon
TCONS_00004699-exon-sc0000047-1510915933:576778..577007TCONS_00004699-exon-sc0000047-1510915933:576778..577007Clytia hemisphaericaexon
TCONS_00004699-exon-sc0000047-1510915933:571155..571538TCONS_00004699-exon-sc0000047-1510915933:571155..571538Clytia hemisphaericaexon
TCONS_00004699-exon-sc0000047-1491911889:581075..581108TCONS_00004699-exon-sc0000047-1491911889:581075..581108Clytia hemisphaericaexon
TCONS_00004699-exon-sc0000047-1491911889:577570..577618TCONS_00004699-exon-sc0000047-1491911889:577570..577618Clytia hemisphaericaexon
TCONS_00004699-exon-sc0000047-1491911889:576778..577007TCONS_00004699-exon-sc0000047-1491911889:576778..577007Clytia hemisphaericaexon
TCONS_00004699-exon-sc0000047-1491911889:571155..571538TCONS_00004699-exon-sc0000047-1491911889:571155..571538Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004699-proteinTCONS_00004699-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000047supercontigsc0000047:571155..581108 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.216311	0	0	0	0	0	0	0	0	0	0	0	0	0	0.0185767	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029052Metallo-depent_PP-like
Blast
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BLAST of TCONS_00004699 vs. Swiss-Prot (Human)
Match: MPPD1 (Metallophosphoesterase domain-containing protein 1 OS=Homo sapiens GN=MPPED1 PE=2 SV=3)

HSP 1 Score: 124.02 bits (310), Expect = 3.696e-33
Identity = 58/127 (45.67%), Postives = 78/127 (61.42%), Query Frame = 1 
Query:   34 EDEGIELMGIKFYGTPWHPEHRVGDAFSVKCGEECLSKWEKIPFDTDVLMTHTPPYGLCD-EGHHIKHAGCPELLYIVQEKIKPRIHAFGHIHEAYGIAKDKTTTYLNASICTRRYRSDNLPFVIDL 411
            +D  + + G + YG+PW P    G  F++  G+  L KW  IP   D+L+TH PP G  D     ++  GC ELL  VQ +++PR+H FGHIHE YG+  D TTTY+NAS+CT  Y+  N P VIDL
Sbjct:  195 QDSEVTVRGFRIYGSPWQPWF-YGWGFNLPRGQALLEKWNLIPEGVDILITHGPPLGFLDWVPKKMQRVGCVELLNTVQRRVQPRLHVFGHIHEGYGVMADGTTTYVNASVCTVNYQPVNPPIVIDL 320
The following BLAST results are available for this feature:
BLAST of TCONS_00004699 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MPPD13.696e-3345.67Metallophosphoesterase domain-containing protein 1... [more]
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