TCONS_00004769 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004769
Unique NameTCONS_00004769
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1632

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004769 ID=TCONS_00004769|Name=TCONS_00004769|organism=Clytia hemisphaerica|type=transcript|length=1632bp
CTTCATTTCTTTAAATTTCACTCCAAATCTATGAAAGGGATTATCAAGAT
ACTGCACTTGGAGCCTATTATGATGTGATGAGTTCTTCTGAGGATTTGCC
TCTCTTTGAAGTGACGGATGAAAGTTGTCATATTAGAGAAAGCTCTATTC
GACCTGGTCAATCATTTATCAAAACATGGAGATTGCGGAATATAGgtGCT
ACAGTTTGGCCTAATaatctaaaattgaaattcacgGGTGGTACGAATTT
CGGTCATGGAGAATGTGCATCCTTGCCACCATTAAGTCCAAACGAGGTGA
CAGATGTTACCATCACCATGATTTCACCAGCCACTGACGGTCAATACGAA
GGACAATGGAGAGTTGTCACTTTAGCTGGTGTCCTATGCGGTACAATGCT
CAAGGTGCAAGTGAACGTTGATTCATCGGGAATGAACTCTTTGACAGAAC
AAATGTCTTCTTTGGGTCAACCACAACAATTTTTTGGTGTCACTGGCGGT
GCAGCACCCACACAGCCAATGTCGACGCCTTTACGCCCTGCGGTTAACGC
CACTCCTTTTTGTTCGCCAACTGGATATGGTTTATTTGGAAGCGGGAATC
TCCCAAATAATGGTGGTGTGAATACAGGTCAGTTGCCAAGGATCAATGAG
GGTGCAAATATGAGTATTGACCCACAACAAATGAACCAACTATTAAACGA
TCCATCAATGTACACCAATAACCAGAACTTCAATAATGGTCCATTTGATA
GTTAACAGTAGTTCTATGACGTCACTCTTATTattaatgatgacgtcatt
cccaCGTGTTCCAATAATATAAGTTGTGTTGTGAATTCACCCGAGAATTC
ATCAATAAAGATATTAACAGTTTATGCTAATGCCGATATTTGTTAATCTC
CATGAGATTGCGAAGATGCATCATTAGAAATCTGTTGCTGACCAAGCGCA
GTGAGAGAATTCGAACTAATTCATGTTTAATCTCAAACGGATGGGAAATC
ACGACATTGTACTGTAGACTACCAAAATGTTCGTGTGGATAAATTGACAG
AAACATAATGACATGATGTGAAATGATAAACTGTTTTTGTAAATtatctt
aaaaatatttcttttttatctgataaaagttttgtaattttgggATGAGA
TCACCAACCAGCCTATTGATTTTACACAAACAGATTTTGGAAAGTTAGAA
GGTATATGGGTATTATAAAAGTCGCCTTTTTGGGGACCTCAAAGTCCCAG
ATAGGAATGAAGGTCATAAGAATCtgtaaatcaaattttttttgaattgt
tattCAAAATTTGTGTTCATTATACTAAAAAGTTTTATCGAAATATCCCC
CCGTATAGTATGGTTTGTAAGAATCACAAAACGTTCGTGCTAATATCAGC
TTTACAACAATATGATTCGAATTGTTCAGAATTTATACTATGTAACACTA
GGAGGTATCATCCAGTAATTATTAAGTTTGTAATATTCAAATTTGTTACG
TTACGTAAAGAGCTTTAGTATTAAACTTTAAATGCATATAAATGTACATC
CAGTCTTTTAGAATGATATTTCTTTATCTTACTTAGTCAAAttgtaatca
atttttttagaatatttctAAGAACAGAAAAT
Run BLAST on NCBI

transcript from alignment at sc0000048:34942..42994-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004769 ID=TCONS_00004769|Name=TCONS_00004769|organism=Clytia hemisphaerica|type=transcript|length=8053bp|location=Sequence derived from alignment at sc0000048:34942..42994- (Clytia hemisphaerica)
CTTCATTTCTTTAAATTTCACTCCAAATCTATGAAAGGGATTATCAAGAT GTAGGGTGTATCGTTTTTCAGTCTAAAGTTCTTGTCTTGTTTTGACATTG TTTGTTTCTGCAATTTGAAAAAAAATTGAATTGTTATTCATCCACATTAT TTCTTACTTCCAAAGCATGAAATTAGTAACATTAATTTTCTTTATTGTTA AGACTTCTAAGCAAGTGGTTGTCTTTTTTTGACATGGTTTAACATGTGTT TTATCAACATTTTTTCAATTTCTAGGCATAGTATAAAATTTCTGATATTA TTATTCTCCTGTTATTAGACTGCACTTGGAGCCTATTATGATGTGATGAG TTCTTCTGAGGATTTGCCTCTCTTTGAAGTGACGGATGAAAGTTGTCATA TTAGAGAAAGCTCTATTCGACCTGGTCAATCATTTATCAAAACATGGAGA TTGCGGAATATAGGTATGGATTAATTATCTGTCTCAGAAGTGGATTTTGA AAATTTTCAATCTTAGACTCAAAATCACGTTTCACATTGTTTCACATTAG ATGTTAATCATCAATTAATTTGTGTGTAATTTTTTCAAAGGAATAACTCT TGATTGCATTCAAAAATAGAACCCCAAAAAGTGAGATTTCCAATCACAGC CACTTTTTAGCCCGCAGCGTTGACATTCTTGTGGCTGCTGTGTAGTACAA AATTCCATAAAATAAGGAAATTGATGAGTCTTCCAAAAATGTGCCTCCCT TTGAAGTTGAGTGATTCAGTCTTGAAATATAAGATGGCAAAGTGAGGGCA GGTTTTGTGGCTGTATGTCACTGTGGCTCACTCAACGGGTTGGCTTATAT GTGCTGTCCTGCTTTAAGACTGCAATATTTTTTAACCATTTTTCTTGAAA TTGTTAGTTTAAGGTCTGATAAAGATACTTATGGGTTTAATTTGTGGCTG CAGGGTTTTCAATGGGCTTAAAATGTGGCTTCAATCACTAATTTATCAAT TTACACATTCCAGGTTGGGTTTTGTTTTCGAAACATGAATATTTGCAAAG ACTAATGCAAAACAAACACAATCTGACACAATACAGTGTTATTTTAAGAA AAAGTGTACATTTTGTGGCTGCAAATACCATTTTTTACATATAACCTTCT GAGCTGTTACATATAAGTATTAGTTGGTATTTTTAGGGTTGGCTTATGTG CTGTCCTGCTTTAAGACTTCAATATTATTTAATCATTTTTCTTGAAATTG TTAGTTTAAGGTCTTATAAAGATACTTATGGGTTTAATTTGTGGCTGCAG GGTTTTCAATGGGCTTAAAATGTTGCTTCAATCAAAGCATATTTGAAAAA AATCGTCAACTTTGAGCCGCAATTCTAGCCCAATGATCCAATAATTTTGG TTCCATTTTTTATATTTTGTGGATAAACCCTTTGGCTACGAGTTCCATCT AAAAAAAAATGATTTTTACTCATTGAACAAATTTGTTGCTGTTTTATCAA CATAGTGTTTTTCTTGATTTGCGCCGCAATTTTGGCCCATTTTACAAAAA AAAAATTATTACTTATATCACCTTTAGAACCAATATTTTGAAGTTTCGTT TGAAAAGAGTTATTTTTAAAAAGGATATTCAAATTTCTTTTTTTTTTGCT GTTTTTGAAAACCTTACACAATTTTTGAATGCCATCTCTTGGCTAAAATT TCAATCTTTTATGGTAATCACTATTAAAACCATTCTGTGTATATCGGGAC CATCTCCATGTACTATTACACCCTTGTCTCGATATAATTGAAATTATCAG GTGGCGAATATTAGGATCTACCGGGTGCGCCACAAAAAAGTTTCTCTCTT TAAAAGTAATTTTTTTCGAAATCTAAAAATTTTAAAAGAACCATTCCTAT TTTATTGGAAAGAAGAAAAATAAACTTAAATTTTGATGGGTCATTTATTG AATTCGATTCATTACAGTATATGGCCCCCAAAACGGAGACGGCCCCCAAA ACGGAGGTTTTCATAAAAATGAAGATTCTGACTTGTAGATTTATCAGAAT AAACGATATTTGTTTATTTTGAAAGAATGATGGTTATACTTAAAAATGAG CATGTTTTTGATGGTTTGAGACAGATTCAAAATCACATATTTGCGTCTAA AGGAAATATTTTAACACCAAAATTAGATAAAAATTGCATATAACTCACTC TAGCTCCTTGGATACTGAAAATAAGTTATGAAAACGGGGTATATGAAACT TTCTACACCTAATACCGTTCAGAAAATGCAAATACATCTGTGACTTTAGA GGCTGGGTAAAAGATATAGCATCTTGAAGGTTGACCAGTATTTTGGAGCC CTAAATTTAGCATTGACAAAACCGAAATTCTAATTATGAGAAAAAGCAAA AAATCTTGGAATTCTATTCCTATCACCTTGAGTTAATAGTTTATAACAAA AAATTAACATGATATATAAAATTTTTCGCTGNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNCTGTTTAAATGACCTTTTGTTATT TAAAGGAAGGTTGAATTTCAATGAAAGGAAGAAAATTCGTCGAAAAAGGC CAAAAAATCTGGTAGAATTCATAAAAAAACATCAAATATGGGTTTCGAAG TAGATTCAGCCTTACATAGACAATCCAGTCTAGAACCAAAAATCTGAGGA AAATTTTGGTAAAACTAAATCAAATTAATTTTGATGAAGATTTTGAACCC TTTCGACCCTTCAGTTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNTTTTTATTCAATTGGACATAACTTTTGATCTAATGA ATCAAATTTAATAAATGACCCATCAAAATTTAAGTCTATCTTTCTTCTTT CCAATGAAATAAGATTGGTTCTTTTAAAATTTTTAGATTTCGAGAAAATT AGTTTCAAAGAGAGAAACTTTTTTGTGGCGCACCCGGTAGTTAAAAAATT TCGGTGGGGATTCCAAATCTATGATTTAAAGCTCGAAAATCCAGGGGAAT AGGGATTCTCCAAGTTATTGTGTTTTTACCCTAGTGCCTTGAAAGTTTAG TTTAATTGTTAGTGAAAACCATCACCGGGGTAGGGATAAATTTTTGTAAC CAGCACGTTTTTGGACAGGATGGGCTGTTTAAATAAATAAATTTATTTAT TTATAGGTGCTACAGTTTGGCCTAATAATCTAAAATTGAAATTCACGGGT GGTACGAATTTCGGTCATGGAGAATGTGCATCCTTGCCACCATTAAGTCC AAACGAGGTGACAGATGTTACCATCACCATGATTTCACCAGCCACTGACG GTCAATACGAAGGACAATGGAGAGTTGTCACTTTAGCTGGTGTCCTATGC GGTAGTAAGTATTTATCTTCGCTACAATAGTAATGCAAGGGGAAAAGGCA ATTGGTTCAGGTTATGGAGACTTTCAAGTTGCAGTGGTTTTCAAGATTTA TTTTATCTCTCAGAATATCAGAATCTTCCCATTATTTGAAAACCAACTGA ATCAAGAAAAGTAAATTCAATTTCGAGTCTTGTAAACTCTTCCTTTTAAT TTCTTTACTTTTCTTGGGTCGGTGATGTAAAAAACAATTCCATCTTGTTT GTTTTTTAATAACAAAATATATAAAAAGAGAAAACTAATCGAATGTTTAT AGAGAGTTTGATATGTAGAGACGCAAAAAACCTTAAAGGTTTTATTTTTA CATAAGTGGTCCCGTTTCATATCGGACACATATTTCATATCAGAACATGT CTGCCTTTGTTATATTATGCTGATATAAACAAAAAAATGTTTTTCTTTTC CTCTTTTTGACCAATCTTGCTCCACATCCGTGTCAATCCAATGTGAGAAA GCTTGTAAATTAAAATTGATGTTTATTCTCGGGACAAACTGGAGTTTTTA CAAGCTCTTATTTGATTTGGTTGGTCGTTAAGATGTAATAAAAGAATCTT ATTACTTTTTCTAAAGAACGCGTCATCTCTATCACTTTAAATGACCAATT GGTGAAGTATCTTGTAAAAACTCCAAGGCATCTCCAGAAATGAAGGAATG CTGCCTCGCCTAAATAAATTCACATTCGATTCATGGAGGTCCGAGTTAAG GTCTATGAGGTTTTTTATCATGTATTCAAATTGCTAGCGATCTTCTTCAA TTCAAATTTAAAATTGTAAAGAGCTTTTACCTGCAACCGTATTGTACACT GTCCGACCCCGTCACTTTCTCCGCATCATAACCTTGTACCGTATGTGTAG CAATTTTGACGTGTACACTCAATTAGGCGGTTGGTCAAAATTCGATTTTT AGTGGGTATTTAATTTGAATTTTTCTCGAGTTCTATGAACTGTTAAATAA TCAATGCATTTGCATTGGAAAGAGGAAGTATAAACTTAAATTTTGAGGGG TCTTTTGTCAAATTTAGTCAACTAGATGCCTAAATGCTAAAACATTACTC TTAAAAAGACTAAAAAGGGTGAAAAACGAGGGTATTATTATCTTTCCTCT TTCCAATGCAAAAGGAATGATTCTTTAAAAGTTCATAAAACTCGCAAAAA TTCACTTCAAAGAGGGGGACCTTTTTCTGGGACACCCGGTAGTTTAAACT GAAAAATGCTGATTTTAGAAAAGATAGGATAGGATTTTACCAAAAATTCG CCATTAAGTAATACACTTTAGGTAAAAATATTTGGTGAACTTCAATTTTT TGTGATCTTCAATTTTTCAGCAATGCTCAAGGTGCAAGTGAACGTTGATT CATCGGGAATGAACTCTTTGACAGAACAAATGTCTTCTTTGGGTCAACCA CAACAATTTTTTGGTGTCACTGGCGGTGCAGCACCCACACAGCCAATGTC GACGCCTTTACGCCCTGCGGTTAACGCCACTCCTTTTTGTTCGCCAACTG GATATGGTTTATTTGGAAGCGGGAATGTGAGTTCTTTTTTGAAACATCAT TTGTAGTTATTAATGTATCCTTATAATGTGTAAGGGACCCAACTTTTCGT GAAAAAATTTATAGGGGGTAAGACTTTTTCCGATTAAAACGGGGATTTTG AGCTTTAAGGGGGGTAAATGACAATAGGTATGGTGTTGTTGCTGATTTTG ATTGTTTCAATTGTTTTACAAGTTTGTTTTGGACACGTGATTTTAATTTT TCTCTTAATGACACGTGGTTTGCGCAATGTTGTCAATCTATGCATTATAT CTCATATTGGTTGAAGAATTTGGTAATGGTTTATCAAAATTACAATATAA TAAATAGCAAAACCTTTGCCTGCGGTGCAATTTCCACCCAGAAACAAAAG AATTGTGAATTTTTTTGCGTATTTATAACGTTTGGTATAAACCTGAACTG TTAATAATGGATGCAGTGTGGCATGGGAGTTCAGTACCCGCTGCACGCTA ATGATAGGTTCCATAGGAGAAAGGGGTTACTTCTAGTTGTCAAGAAGTTT TTCCATACAAAAAAATCTGAACTCGAAAAATATATCCCATATTTTACTCG GTACCATGCGATCACTATTACTTATTTTGAATAAATTTCAGCATATTTTT CAAGTAATGAATTTTTTTTAACCTTATAAACCCAGTATCGTAGACAGAAG GGGCGTATAAAAAGATATTTACTTTGTCATGAAAATATGCTCTTCTACAC AAATTTTGCACCCCTCCTGTCCTCATTATGTCCAAGTGACCCCTTTTATT TGAAATTTTCACAAGCCCCCTTCTTTTAAATTCATTAAAATTCTCAAACC ACCCCCCCCCCCTTTTTCAAGGGGGGTGCCCACCACTGCAGTACTCGGTT TGGGTCGATTTGTAACCAAATTCTTTTTTTGCAGTCACTTTATAGTTTAT TGCATTTTTGTTTTATTCTTTATTTTAGTCAATAATAAATCAATATAATT TTTTCATCAAATATTTTTTTGCAAAAATTTGTAACCAAAATGCAACGAGA TTCTCCGTTTAAAAAAAATTGTTGACCCGCATCCAGTGGTAACATTAGGA TTCCATTTAAAAAAGATAATGTTTTGTGAGGACCCAGGGCTTACAAGGTG ACAGTGACGTCACGGTCAAAATTCAAATTAAATGGAAATTTGGTCCACTT ATTTTATTGGAACTATTTCTTATATTTCCTGAATTAAATGAATAACATTA NGTCCTCTTATTTTATTGGAACTATTTCTTATATTTCCTGAATTCAATGA ATAACATTATCTTCTTTTAGCTCCCAAATAATGGTGGTGTGAATACAGGT CAGTTGCCAAGGATCAATGAGGGTGCAAATATGAGTATTGACCCACAACA AATGAACCAACTATTAAACGATCCATCAATGTACACCAATAACCAGAACT TCAATAATGGTCCATTTGATAGTTAACAGTAGTTCTATGACGTCACTCTT ATTATTAATGATGACGTCATTCCCACGTGTTCCAATAATATAAGTTGTGT TGTGAATTCACCCGAGAATTCATCAATAAAGATATTAACAGTTTATGCTA ATGCCGATATTTGTTAATCTCCATGAGATTGCGAAGATGCATCATTAGAA ATCTGTTGCTGACCAAGCGCAGTGAGAGAATTCGAACTAATTCATGTTTA ATCTCAAACGGATGGGAAATCACGACATTGTACTGTAGACTACCAAAATG TTCGTGTGGATAAATTGACAGAAACATAATGACATGATGTGAAATGATAA ACTGTTTTTGTAAATTATCTTAAAAATATTTCTTTTTTATCTGATAAAAG TTTTGTAATTTTGGGATGAGATCACCAACCAGCCTATTGATTTTACACAA ACAGATTTTGGAAAGTTAGAAGGTATATGGGTATTATAAAAGTCGCCTTT TTGGGGACCTCAAAGTCCCAGATAGGAATGAAGGTCATAAGAATCTGTAA ATCAAATTTTTTTTGAATTGTTATTCAAAATTTGTGTTCATTATACTAAA AAGTTTTATCGAAATATCCCCCCGTATAGTATGGTTTGTAAGAATCACAA AACGTTCGTGCTAATATCAGCTTTACAACAATATGATTCGAATTGTTCAG AATTTATACTATGTAACACTAGGAGGTATCATCCAGTAATTATTAAGTTT GTAATATTCAAATTTGTTACGTTACGTAAAGAGCTTTAGTATTAAACTTT AAATGCATATAAATGTACATCCAGTCTTTTAGAATGATATTTCTTTATCT TACTTAGTCAAATTGTAATCAATTTTTTTAGAATATTTCTAAGAACAGAA AAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002700XLOC_002700Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004769-exon-sc0000048-1575043694:42945..42994TCONS_00004769-exon-sc0000048-1575043694:42945..42994Clytia hemisphaericaexon
TCONS_00004769-exon-sc0000048-1575043694:42532..42676TCONS_00004769-exon-sc0000048-1575043694:42532..42676Clytia hemisphaericaexon
TCONS_00004769-exon-sc0000048-1575043694:38841..39038TCONS_00004769-exon-sc0000048-1575043694:38841..39038Clytia hemisphaericaexon
TCONS_00004769-exon-sc0000048-1575043694:37269..37474TCONS_00004769-exon-sc0000048-1575043694:37269..37474Clytia hemisphaericaexon
TCONS_00004769-exon-sc0000048-1575043694:34942..35974TCONS_00004769-exon-sc0000048-1575043694:34942..35974Clytia hemisphaericaexon
TCONS_00004769-exon-sc0000048-1510915933:42945..42994TCONS_00004769-exon-sc0000048-1510915933:42945..42994Clytia hemisphaericaexon
TCONS_00004769-exon-sc0000048-1510915933:42532..42676TCONS_00004769-exon-sc0000048-1510915933:42532..42676Clytia hemisphaericaexon
TCONS_00004769-exon-sc0000048-1510915933:38841..39038TCONS_00004769-exon-sc0000048-1510915933:38841..39038Clytia hemisphaericaexon
TCONS_00004769-exon-sc0000048-1510915933:37269..37474TCONS_00004769-exon-sc0000048-1510915933:37269..37474Clytia hemisphaericaexon
TCONS_00004769-exon-sc0000048-1510915933:34942..35974TCONS_00004769-exon-sc0000048-1510915933:34942..35974Clytia hemisphaericaexon
TCONS_00004769-exon-sc0000048-1491911889:42945..42994TCONS_00004769-exon-sc0000048-1491911889:42945..42994Clytia hemisphaericaexon
TCONS_00004769-exon-sc0000048-1491911889:42532..42676TCONS_00004769-exon-sc0000048-1491911889:42532..42676Clytia hemisphaericaexon
TCONS_00004769-exon-sc0000048-1491911889:38841..39038TCONS_00004769-exon-sc0000048-1491911889:38841..39038Clytia hemisphaericaexon
TCONS_00004769-exon-sc0000048-1491911889:37269..37474TCONS_00004769-exon-sc0000048-1491911889:37269..37474Clytia hemisphaericaexon
TCONS_00004769-exon-sc0000048-1491911889:34942..35974TCONS_00004769-exon-sc0000048-1491911889:34942..35974Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000048supercontigsc0000048:34942..42994 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 1.77401 1.303 0 0 0 0 0 0 0 0.745718 0.365191 0.210032 0 1.81862 0.668605 0 1.49241 0 0.565957 2.11941 3.5581 2.82204 1.15436 0 0 0.000119045 4.09663 2.4569 0
Blast
BLAST of TCONS_00004769 vs. Swiss-Prot (Human)
Match: CF106 (Uncharacterized protein C6orf106 OS=Homo sapiens GN=C6orf106 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.327e-26
Identity = 64/190 (33.68%), Postives = 94/190 (49.47%), Query Frame = 3
Query:   51 TALGAYYDVMSSSEDLPLFEVTDESCHIRESSIRPGQSFIKTWRLRNIGATVWPNNLKLKFTGGTNFGHGECASLPPLSPNEVTDVTITMISPATDGQYEGQWRVVTLAGVLCGTMLKVQVNVDSSGMNSLTEQMSSLGQPQQFFGVTGGAAPTQPMSTPLRPAV-NATPFCSPTGYGLFGSGNLPNNGG 617
             A+GAYYD  S +  +P     ++       SI P   F+KTWR++N GA  WP  + LK+ GG  FGH     +  L P E+ DV++ M SP+  G Y+GQWR+ T  G+  G ++ V ++V+  G+  +T+Q+SS                T+  + P R    N  PF SP         NL + GG
Sbjct:   57 AAIGAYYDFESPNISVPSMSFVEDVTIGEGESIPPDTQFVKTWRIQNSGAEAWPPGVCLKYVGGDQFGHVNMVMVRSLEPQEIADVSVQMCSPSRAGMYQGQWRMCTATGLYYGDVIWVILSVEVGGLLGVTQQLSSF--------------ETEFNTQPHRKVEGNFNPFASPQKNRQSDENNLKDPGG 232          
The following BLAST results are available for this feature:
BLAST of TCONS_00004769 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CF1062.327e-2633.68Uncharacterized protein C6orf106 OS=Homo sapiens G... [more]
back to top