TCONS_00004774 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004774
Unique NameTCONS_00004774
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2247

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004774 ID=TCONS_00004774|Name=TCONS_00004774|organism=Clytia hemisphaerica|type=transcript|length=2247bp
GTTCTTGATTACTTGTATGCCATTGCACAATCACATTCATTTTGTCATTC
TATGAAGATGTCACTGGGTTCCAATGAAGCTAAGGAGGCAGTTGCAACAC
TTCGTGATCGTTTGAAACATGGGCAAAACATGACCAAGATATTGGAATCA
CAACTGGATACAGCGCAACAGAATATAAGTTTATTGCAAGGGCAAGTGCG
TTTAGCCAACGAAACCATTTTGAACTTGAAGAAATATTTCACCGAAACGG
AGAACACTTTGAATGATTTGTTTACATCGAATCATTCCTCAAGAAGTTTT
CAATACAATGATGGTGCTACAAAGGAGCAATCAGATATggataaaaatca
acaaatgtCGAAAGTTGCTCGAGGTTCTACTAGATCACCAAGAACACCAG
AGTCGATGGATACTAAGACACACCATGACGACAAACGCAGGGAGCGTGAG
CACAACAACAAATCACCATACGCACAACAATTACGTCAAGTTCTGGATGC
TCTACAAGACGAAGAGCCGAAGAAATCTTCACACACTCATCATCGTTTAC
ACGAGAAAACAGAACCTTCAGAACACAGTCCATCACCTCCGCCTGCAGAC
CGTCGTTTGATGCAGGCTACAAAACATTATCACCATGAGAATGAAGGTGG
TGCCTTTCAAAGACGACAACCTCATCCAGAAGAGGACTATCCAAAGATGA
AACACCATAAAATGAACGGTCATCCTTCAAGAGAATCAACCAATGGGAAC
CATCATGACCCAATCTCCCCTAAACCATCCTATTATCAACAACACCATTC
TAATGAGTTGTCACACGGTCATCATCAGCCACATCCTCATAGCAACCATT
GCATGGGACCATGTTGTCCCAGCGAAACGCCACCATCAAGCTACAAAATG
ATGGAGAAATCATATCATTATGGTTCAGATGAAAAACCGACACACTATGT
GGAGAAATCACCAAATGGAGGTGTTCACTATattgctgtacattcaccag
agaGCACTACCAGCTCTGGCAAACATGGCGAAAGACATCATAGTCATCAT
TATGTTCCTTATGCTTACCACATCCCTGGTGAGAATCCACATAAAATGAT
ACACGAAATGCCACCGCAACCACTTTCACCGACAACCAACAGTGGTGGTG
GGCGCCGAAAGAGGGCGTACGCCCCATTGTTACCAAATGAAGAACCACCA
CATTTGAAATACACCAAAGTGAAGCGAATCGATGGTAGCAAGTTGACAGC
ACAAAAAGTCCTCCAAGATTTCACAAAGAGGCGATTCATTGCTTATAATC
CACGATACGATTTGGACTTATTAATTGTTCCTCCGCCCATCCCTGCATCA
GACCTCCTCAAGGGCGGTCATCAATTCAAAGGAACTGAACAAAAAATGAC
CAACATTCGATCTCCAGTAGCCTCACcacaagaaaacaaaattcaaagcG
AACGTCGATCAACAATTTACGGAAAACCATCCAATGAGAGTCACTCCGAT
AAAGAGGACGAGGAAGTTTTTACGGAACCGAGAAGTCCTCTTGATGACGC
AAACAATAATAATCACCATGACGataacaacaacaataacaaaactGTAA
ATAATAATTCATGGCCGCACAAGCCACAAATATATTCAGGGAAAGGTGTC
TCTGTGTTACCAAGCATCAAAGAGGAGCCGAGGAGCAATAAATTGGAAGA
TCAGATTAATAAGTTGAGACATGATCAAGAAGCGAATACGATTCCAGCCG
TCTACCGACAACAAGACAGTCCTTACAGTGATACCAACAATAATAACGAA
AACAGTCCCATGGTGGTCAGAGAGAATGCAGCTTCGCCGATTCCTATTGT
TAGACGTACCGAACAGTATTGCAGTTAGAAATGCGtttccattttttcca
tttctaaaaactaaaaattttgaatttgtagTGAGTTTAGCGCGTCTTTA
TGTTAAATTTTGTAATCCTTAGGCTCGAAGTGGAGGTGTATTTACTTTAC
AGAGCAGAAGATAGATTAATCTTTGTATCAATGGTGATTTTTTTGTCACG
TTGTCTTGTTGCATTTGGAGATTGGATTATAAAGCCAGTTGCTTTTGTTA
TTGTATATCCTCATTAAAAAAcgtaaatttttgaaactttgttgatattt
ttcctCTTCTTTTTGTATAGTTTACTAGATAGatataattttgaaagttt
ttggatGATTAGACaactttgaaaatattgataaataaataattcat
Run BLAST on NCBI

protein sequence of TCONS_00004774-protein

>TCONS_00004774-protein ID=TCONS_00004774-protein|Name=TCONS_00004774-protein|organism=Clytia hemisphaerica|type=polypeptide|length=625bp
VLDYLYAIAQSHSFCHSMKMSLGSNEAKEAVATLRDRLKHGQNMTKILES
QLDTAQQNISLLQGQVRLANETILNLKKYFTETENTLNDLFTSNHSSRSF
QYNDGATKEQSDMDKNQQMSKVARGSTRSPRTPESMDTKTHHDDKRRERE
HNNKSPYAQQLRQVLDALQDEEPKKSSHTHHRLHEKTEPSEHSPSPPPAD
RRLMQATKHYHHENEGGAFQRRQPHPEEDYPKMKHHKMNGHPSRESTNGN
HHDPISPKPSYYQQHHSNELSHGHHQPHPHSNHCMGPCCPSETPPSSYKM
MEKSYHYGSDEKPTHYVEKSPNGGVHYIAVHSPESTTSSGKHGERHHSHH
YVPYAYHIPGENPHKMIHEMPPQPLSPTTNSGGGRRKRAYAPLLPNEEPP
HLKYTKVKRIDGSKLTAQKVLQDFTKRRFIAYNPRYDLDLLIVPPPIPAS
DLLKGGHQFKGTEQKMTNIRSPVASPQENKIQSERRSTIYGKPSNESHSD
KEDEEVFTEPRSPLDDANNNNHHDDNNNNNKTVNNNSWPHKPQIYSGKGV
SVLPSIKEEPRSNKLEDQINKLRHDQEANTIPAVYRQQDSPYSDTNNNNE
NSPMVVRENAASPIPIVRRTEQYCS
Run BLAST on NCBI

transcript from alignment at sc0000048:126098..131016-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004774 ID=TCONS_00004774|Name=TCONS_00004774|organism=Clytia hemisphaerica|type=transcript|length=4919bp|location=Sequence derived from alignment at sc0000048:126098..131016- (Clytia hemisphaerica)
GTTCTTGATTACTTGTATGCCATTGCACAATCACATTCATTTTGTCATTC TATGCGAGCCTGATTAACATTTCTCTTTGTTCTTTTCTGTTTTGATTGGC TGAAAGCCGAGTTGACATACTGTAATGCTTTTTTTGTTGATATAGCTATT TGAACTTTTTTAATAAATTGCGGATATGTGATTTTATAAGCATACTTTAA GTAATAATCTCAATTCAAGAGGTCTCTAATAAATGCTTTACGGTAGATGT ACAGGAGTATTTTTAGGTCTTAAACTCAAACGTTTGAGAACATCCACAGG TTTAACATACCTACTTCTCACAGTCACATTGGAAACCCTTCCCATTGGGA AAATTGGCCAATATATCGTCCCCAGTGGAATTATACACTAATTCTTGTCC GCGCTGAAAATAATCCGATAAGCAAATCCTCACTGCAACGTATATTGTGC TAATTTTTCAATTCCCACTGAATTTTTGGCTCGAAAAATATGGAATTATC CTACCCGGCCTATGAACTATGAGAAGGGAGTGTCTTAACAATTTCAGATG TTCTTATAAAGAACATGTACTCATTAACTAAAGGAGATGTACTGTGTCAG TTTACATTTCTCGTGATTGACTTCAAATTGAATTTCAGCCTGTTGTTTCA AGTGTTTAAAAAGTCACCCCAAGGTCATCAGCTATTTAATTTTGAACGTA TTGAAATAAAACTCTTCCGTGAAGAAACAAGTACTATCTCTTAATTTCTG TGCCCGATGGAGGAGCTTACACGTTTTTTTTTATAAGAACAAACTATATA AGAACATAAGGCTTCGAGGCCCAAAAATTTAAGAACATTCTAAGGCTTTG GAGACTTAAAAGCATGCATTTTCTTAAAAAATTACATCAAAATGCTCAAA AAATGCTGAAAATAAGAACATTTTAAGAACATTTTTAGGCTTCAAATCCA AAAAACTAAGAACATCCGAAGGCTTCGAAAATTTTTGACGTTCTTATAAA AAAAAAAACGTGTATAAGGACATGGAAAATTCTTTTAACCTGTTGGATGA TCCTTAACAAAATATTCCTATTTTAACCAACTTGTGAGAATTTCTCTCTC ATTTCCTACGAAATTGCATGCTCGAGAGTTCGCAAAGCATTGTATTCTCC TAGAATACACCCTGTGTCACAGACCTGGTGGGACCCCCTACCCACTGGAA AACTTGGCTAAAATTTCGTCTCCGGTGGGAAAATACCCTACAATTTCAGC ACCACTCGAAAATTGACTTAGTTTTCAAAAATTGCAGTCCAAAACCTTTC GATTTTTTGACCTGAAAACAATAGATTTTCTATCCCGATTTGGATTTTGA TAGAAATTTTCATCCCCAATGTGGAAAGAAGTTCCTTCGGGGCTGCAGGG CAAGGTTAAACACTCTTGGGTTTTAAAACTATTGCCTTGAAGCCTATTAC ACTTATATATACTTTGTTCTTTATGAAACGAATGCTAAACAAATGATAAT CAAAAGCAATAGCCTGAACAATGAAAACACTCATAAAAGTCTTTGTTTAC CACTGGCCAATCAGAGAGGCTTTTGCTTTAAATTTCAGCTGTCAAACCGT TTCAGCTGGAATGTTATCTGATTCTCCCAACAAGTTTTGACATGTATGAA GTAGATTTTCTTTAAATAGAAACTGAGTTACATCACCTTCAATAAATGAC ATTGTATATCTCCTTAATTTTTACCCTTCCTTCATTAAGCCACTAGTTGA AGTGTCCTCAAGTGTTTTTTGTCTCACAGCATTGCAAGCATACTTAAATG TCTCGTTTTTCTGTACCAATTGCCAAATGAGAGGTCAAGTTTCACGTGTT CAAGTTTTCATACCCCTCCTCTTACCTTTATGGAGGCTTCCATGAATTGC GTGAATGGGCGGATTTTGTTGTGTGAATGGGCGGCTTTTGTTGCGTGGAT TTTTAGTTCGTTTTCTCTTCTCCATATACCTCAAAACACTCGTTGTAGCT TTGAAACAGGCCGTACATGAACCAGTGAGTATGTCTACGTCGCTATATAG ACATTCAATTTCTTCGCATATTGAACCAAGTGTTAATGAAATCGAAGAAT AGTCAATCATGTGATTAGTTAATTCAAACTCCATTCAGCTCCATACTACT TACAAAACAATTCATACATTTGTCGTAAACATAAAATTACAGCTTATCAA AACTTCAATTTTCTCACCGCACATATTCTGAGTTTATCCAAACCTTACAT CGATATTTATCTAAAATACCAGCTGATCTTACAAAGGTTGTAAAGGCTTC AATTTAATAAGGCTCTCTAAACTGCAAAATTTAATGAAGCCTCTAAAAGT GCCATTATAAGAATTGACAAACGAACAAAATAACTAAATTGAAGCTATTT TTTGTCCTTTCATAGGAAGATGTCACTGGGTTCCAATGAAGCTAAGGAGG CAGTTGCAACACTTCGTGATCGTTTGAAACATGGGCAAAACATGACCAAG ATATTGGAATCACAACTGGATACAGCGCAACAGAATATAAGTTTATTGCA AGGGCAAGTGCGTTTAGCCAACGAAACCATTTTGAACTTGAAGAAATATT TCACCGAAACGGAGAACACTTTGAATGATTTGTTTACATCGAATCATTCC TCAAGAAGTTTTCAATACAATGATGGTGCTACAAAGGAGCAATCAGATAT GGATAAAAATCAACAAATGTCGAAAGTTGCTCGAGGTTCTACTAGATCAC CAAGAACACCAGAGTCGATGGATACTAAGACACACCATGACGACAAACGC AGGGAGCGTGAGCACAACAACAAATCACCATACGCACAACAATTACGTCA AGTTCTGGATGCTCTACAAGACGAAGAGCCGAAGAAATCTTCACACACTC ATCATCGTTTACACGAGAAAACAGAACCTTCAGAACACAGTCCATCACCT CCGCCTGCAGACCGTCGTTTGATGCAGGCTACAAAACATTATCACCATGA GAATGAAGGTGGTGCCTTTCAAAGACGACAACCTCATCCAGAAGAGGACT ATCCAAAGATGAAACACCATAAAATGAACGGTCATCCTTCAAGAGAATCA ACCAATGGGAACCATCATGACCCAATCTCCCCTAAACCATCCTATTATCA ACAACACCATTCTAATGAGTTGTCACACGGTCATCATCAGCCACATCCTC ATAGCAACCATTGCATGGGACCATGTTGTCCCAGCGAAACGCCACCATCA AGCTACAAAATGATGGAGAAATCATATCATTATGGTTCAGATGAAAAACC GACACACTATGTGGAGAAATCACCAAATGGAGGTGTTCACTATATTGCTG TACATTCACCAGAGAGCACTACCAGCTCTGGCAAACATGGCGAAAGACAT CATAGTCATCATTATGTTCCTTATGCTTACCACATCCCTGGTGAGAATCC ACATAAAATGATACACGAAATGCCACCGCAACCACTTTCACCGACAACCA ACAGTGGTGGTGGGCGCCGAAAGAGGGCGTACGCCCCATTGTTACCAAAT GAAGAACCACCACATTTGAAATACACCAAAGTGAAGCGAATCGATGGTAG CAAGTTGACAGCACAAAAAGTCCTCCAAGGTATACCTACTTTTCAATATT TCTTTCTTTCTCTTTTTAAACTGTTAACGATCGAAGAAACAACAAAATAC AACAATTCAAACATTCAACATCGAAGAATTGTTATTTCTATCCTTTCTAT CCTTACTTGAAATTAAGGGACAATCTTAATTAGTATAAAGTTTACGTGGG GCTATTATCTGAATATTAAGATATAAAGCAACATTTTCAAATTTAACAGT CTACTTTCAGAGTTATTTTTCAACCAGACTTGATTTGACCAGAACATTGA TACAGGAGAATATATATTTTTATTTGCTTTTTGTTTCAGATTTCACAAAG AGGCGATTCATTGCTTATAATCCACGATACGATTTGGACTTATTAATTGT TCCTCCGCCCATCCCTGCATCAGACCTCCTCAAGGGCGGTCATCAATTCA AAGGAACTGAACAAAAAATGACCAACATTCGATCTCCAGTAGCCTCACCA CAAGAAAACAAAATTCAAAGCGAACGTCGATCAACAATTTACGGAAAACC ATCCAATGAGAGTCACTCCGATAAAGAGGACGAGGAAGTTTTTACGGAAC CGAGAAGTCCTCTTGATGACGCAAACAATAATAATCACCATGACGATAAC AACAACAATAACAAAACTGTAAATAATAATTCATGGCCGCACAAGCCACA AATATATTCAGGGAAAGGTGTCTCTGTGTTACCAAGCATCAAAGAGGAGC CGAGGAGCAATAAATTGGAAGATCAGATTAATAAGTTGAGACATGATCAA GAAGCGAATACGATTCCAGCCGTCTACCGACAACAAGACAGTCCTTACAG TGATACCAACAATAATAACGAAAACAGTCCCATGGTGGTCAGAGAGAATG CAGCTTCGCCGATTCCTATTGTTAGACGTACCGAACAGTATTGCAGTTAG AAATGCGTTTCCATTTTTTCCATTTCTAAAAACTAAAAATTTTGAATTTG TAGTGAGTTTAGCGCGTCTTTATGTTAAATTTTGTAATCCTTAGGCTCGA AGTGGAGGTGTATTTACTTTACAGAGCAGAAGATAGATTAATCTTTGTAT CAATGGTGATTTTTTTGTCACGTTGTCTTGTTGCATTTGGAGATTGGATT ATAAAGCCAGTTGCTTTTGTTATTGTATATCCTCATTAAAAAACGTAAAT TTTTGAAACTTTGTTGATATTTTTCCTCTTCTTTTTGTATAGTTTACTAG ATAGATATAATTTTGAAAGTTTTTGGATGATTAGACAACTTTGAAAATAT TGATAAATAAATAATTCAT

Coding sequence (CDS) from alignment at sc0000048:126098..131016-

>TCONS_00004774 ID=TCONS_00004774|Name=TCONS_00004774|organism=Clytia hemisphaerica|type=CDS|length=5634bp|location=Sequence derived from alignment at sc0000048:126098..131016- (Clytia hemisphaerica)
ATTTCACAAAGAGGCGATTCATTGCTTATAATCCACGATACGATTTGGAC
TTATTAATTGTTCCTCCGCCCATCCCTGCATCAGACCTCCTCAAGGGCGG
TCATCAATTCAAAGGAACTGAACAAAAAATGACCAACATTCGATCTCCAG
TAGCCTCACCACAAGAAAACAAAATTCAAAGCGAACGTCGATCAACAATT
TACGGAAAACCATCCAATGAGAGTCACTCCGATAAAGAGGACGAGGAAGT
TTTTACGGAACCGAGAAGTCCTCTTGATGACGCAAACAATAATAATCACC
ATGACGATAACAACAACAATAACAAAACTGTAAATAATAATTCATGGCCG
CACAAGCCACAAATATATTCAGGGAAAGGTGTCTCTGTGTTACCAAGCAT
CAAAGAGGAGCCGAGGAGCAATAAATTGGAAGATCAGATTAATAAGTTGA
GACATGATCAAGAAGCGAATACGATTCCAGCCGTCTACCGACAACAAGAC
AGTCCTTACAGTGATACCAACAATAATAACGAAAACAGTCCCATGGTGGT
CAGAGAGAATGCAGCTTCGCCGATTCCTATTGTTAGACGTACCGAACAGT
ATTGCAGTTAGGAAGATGTCACTGGGTTCCAATGAAGCTAAGGAGGCAGT
TGCAACACTTCGTGATCGTTTGAAACATGGGCAAAACATGACCAAGATAT
TGGAATCACAACTGGATACAGCGCAACAGAATATAAGTTTATTGCAAGGG
CAAGTGCGTTTAGCCAACGAAACCATTTTGAACTTGAAGAAATATTTCAC
CGAAACGGAGAACACTTTGAATGATTTGTTTACATCGAATCATTCCTCAA
GAAGTTTTCAATACAATGATGGTGCTACAAAGGAGCAATCAGATATGGAT
AAAAATCAACAAATGTCGAAAGTTGCTCGAGGTTCTACTAGATCACCAAG
AACACCAGAGTCGATGGATACTAAGACACACCATGACGACAAACGCAGGG
AGCGTGAGCACAACAACAAATCACCATACGCACAACAATTACGTCAAGTT
CTGGATGCTCTACAAGACGAAGAGCCGAAGAAATCTTCACACACTCATCA
TCGTTTACACGAGAAAACAGAACCTTCAGAACACAGTCCATCACCTCCGC
CTGCAGACCGTCGTTTGATGCAGGCTACAAAACATTATCACCATGAGAAT
GAAGGTGGTGCCTTTCAAAGACGACAACCTCATCCAGAAGAGGACTATCC
AAAGATGAAACACCATAAAATGAACGGTCATCCTTCAAGAGAATCAACCA
ATGGGAACCATCATGACCCAATCTCCCCTAAACCATCCTATTATCAACAA
CACCATTCTAATGAGTTGTCACACGGTCATCATCAGCCACATCCTCATAG
CAACCATTGCATGGGACCATGTTGTCCCAGCGAAACGCCACCATCAAGCT
ACAAAATGATGGAGAAATCATATCATTATGGTTCAGATGAAAAACCGACA
CACTATGTGGAGAAATCACCAAATGGAGGTGTTCACTATATTGCTGTACA
TTCACCAGAGAGCACTACCAGCTCTGGCAAACATGGCGAAAGACATCATA
GTCATCATTATGTTCCTTATGCTTACCACATCCCTGGTGAGAATCCACAT
AAAATGATACACGAAATGCCACCGCAACCACTTTCACCGACAACCAACAG
TGGTGGTGGGCGCCGAAAGAGGGCGTACGCCCCATTGTTACCAAATGAAG
AACCACCACATTTGAAATACACCAAAGTGAAGCGAATCGATGGTAGCAAG
TTGACAGCACAAAAAGTCCTCCAAGGTTCTTGATTACTTGTATGCCATTG
CACAATCACATTCATTTTGTCATTCTATATTTCACAAAGAGGCGATTCAT
TGCTTATAATCCACGATACGATTTGGACTTATTAATTGTTCCTCCGCCCA
TCCCTGCATCAGACCTCCTCAAGGGCGGTCATCAATTCAAAGGAACTGAA
CAAAAAATGACCAACATTCGATCTCCAGTAGCCTCACCACAAGAAAACAA
AATTCAAAGCGAACGTCGATCAACAATTTACGGAAAACCATCCAATGAGA
GTCACTCCGATAAAGAGGACGAGGAAGTTTTTACGGAACCGAGAAGTCCT
CTTGATGACGCAAACAATAATAATCACCATGACGATAACAACAACAATAA
CAAAACTGTAAATAATAATTCATGGCCGCACAAGCCACAAATATATTCAG
GGAAAGGTGTCTCTGTGTTACCAAGCATCAAAGAGGAGCCGAGGAGCAAT
AAATTGGAAGATCAGATTAATAAGTTGAGACATGATCAAGAAGCGAATAC
GATTCCAGCCGTCTACCGACAACAAGACAGTCCTTACAGTGATACCAACA
ATAATAACGAAAACAGTCCCATGGTGGTCAGAGAGAATGCAGCTTCGCCG
ATTCCTATTGTTAGACGTACCGAACAGTATTGCAGTTAGGAAGATGTCAC
TGGGTTCCAATGAAGCTAAGGAGGCAGTTGCAACACTTCGTGATCGTTTG
AAACATGGGCAAAACATGACCAAGATATTGGAATCACAACTGGATACAGC
GCAACAGAATATAAGTTTATTGCAAGGGCAAGTGCGTTTAGCCAACGAAA
CCATTTTGAACTTGAAGAAATATTTCACCGAAACGGAGAACACTTTGAAT
GATTTGTTTACATCGAATCATTCCTCAAGAAGTTTTCAATACAATGATGG
TGCTACAAAGGAGCAATCAGATATGGATAAAAATCAACAAATGTCGAAAG
TTGCTCGAGGTTCTACTAGATCACCAAGAACACCAGAGTCGATGGATACT
AAGACACACCATGACGACAAACGCAGGGAGCGTGAGCACAACAACAAATC
ACCATACGCACAACAATTACGTCAAGTTCTGGATGCTCTACAAGACGAAG
AGCCGAAGAAATCTTCACACACTCATCATCGTTTACACGAGAAAACAGAA
CCTTCAGAACACAGTCCATCACCTCCGCCTGCAGACCGTCGTTTGATGCA
GGCTACAAAACATTATCACCATGAGAATGAAGGTGGTGCCTTTCAAAGAC
GACAACCTCATCCAGAAGAGGACTATCCAAAGATGAAACACCATAAAATG
AACGGTCATCCTTCAAGAGAATCAACCAATGGGAACCATCATGACCCAAT
CTCCCCTAAACCATCCTATTATCAACAACACCATTCTAATGAGTTGTCAC
ACGGTCATCATCAGCCACATCCTCATAGCAACCATTGCATGGGACCATGT
TGTCCCAGCGAAACGCCACCATCAAGCTACAAAATGATGGAGAAATCATA
TCATTATGGTTCAGATGAAAAACCGACACACTATGTGGAGAAATCACCAA
ATGGAGGTGTTCACTATATTGCTGTACATTCACCAGAGAGCACTACCAGC
TCTGGCAAACATGGCGAAAGACATCATAGTCATCATTATGTTCCTTATGC
TTACCACATCCCTGGTGAGAATCCACATAAAATGATACACGAAATGCCAC
CGCAACCACTTTCACCGACAACCAACAGTGGTGGTGGGCGCCGAAAGAGG
GCGTACGCCCCATTGTTACCAAATGAAGAACCACCACATTTGAAATACAC
CAAAGTGAAGCGAATCGATGGTAGCAAGTTGACAGCACAAAAAGTCCTCC
AAGGTTCTTGATTACTTGTATGCCATTGCACAATCACATTCATTTTGTCA
TTCTATATTTCACAAAGAGGCGATTCATTGCTTATAATCCACGATACGAT
TTGGACTTATTAATTGTTCCTCCGCCCATCCCTGCATCAGACCTCCTCAA
GGGCGGTCATCAATTCAAAGGAACTGAACAAAAAATGACCAACATTCGAT
CTCCAGTAGCCTCACCACAAGAAAACAAAATTCAAAGCGAACGTCGATCA
ACAATTTACGGAAAACCATCCAATGAGAGTCACTCCGATAAAGAGGACGA
GGAAGTTTTTACGGAACCGAGAAGTCCTCTTGATGACGCAAACAATAATA
ATCACCATGACGATAACAACAACAATAACAAAACTGTAAATAATAATTCA
TGGCCGCACAAGCCACAAATATATTCAGGGAAAGGTGTCTCTGTGTTACC
AAGCATCAAAGAGGAGCCGAGGAGCAATAAATTGGAAGATCAGATTAATA
AGTTGAGACATGATCAAGAAGCGAATACGATTCCAGCCGTCTACCGACAA
CAAGACAGTCCTTACAGTGATACCAACAATAATAACGAAAACAGTCCCAT
GGTGGTCAGAGAGAATGCAGCTTCGCCGATTCCTATTGTTAGACGTACCG
AACAGTATTGCAGTTAGGAAGATGTCACTGGGTTCCAATGAAGCTAAGGA
GGCAGTTGCAACACTTCGTGATCGTTTGAAACATGGGCAAAACATGACCA
AGATATTGGAATCACAACTGGATACAGCGCAACAGAATATAAGTTTATTG
CAAGGGCAAGTGCGTTTAGCCAACGAAACCATTTTGAACTTGAAGAAATA
TTTCACCGAAACGGAGAACACTTTGAATGATTTGTTTACATCGAATCATT
CCTCAAGAAGTTTTCAATACAATGATGGTGCTACAAAGGAGCAATCAGAT
ATGGATAAAAATCAACAAATGTCGAAAGTTGCTCGAGGTTCTACTAGATC
ACCAAGAACACCAGAGTCGATGGATACTAAGACACACCATGACGACAAAC
GCAGGGAGCGTGAGCACAACAACAAATCACCATACGCACAACAATTACGT
CAAGTTCTGGATGCTCTACAAGACGAAGAGCCGAAGAAATCTTCACACAC
TCATCATCGTTTACACGAGAAAACAGAACCTTCAGAACACAGTCCATCAC
CTCCGCCTGCAGACCGTCGTTTGATGCAGGCTACAAAACATTATCACCAT
GAGAATGAAGGTGGTGCCTTTCAAAGACGACAACCTCATCCAGAAGAGGA
CTATCCAAAGATGAAACACCATAAAATGAACGGTCATCCTTCAAGAGAAT
CAACCAATGGGAACCATCATGACCCAATCTCCCCTAAACCATCCTATTAT
CAACAACACCATTCTAATGAGTTGTCACACGGTCATCATCAGCCACATCC
TCATAGCAACCATTGCATGGGACCATGTTGTCCCAGCGAAACGCCACCAT
CAAGCTACAAAATGATGGAGAAATCATATCATTATGGTTCAGATGAAAAA
CCGACACACTATGTGGAGAAATCACCAAATGGAGGTGTTCACTATATTGC
TGTACATTCACCAGAGAGCACTACCAGCTCTGGCAAACATGGCGAAAGAC
ATCATAGTCATCATTATGTTCCTTATGCTTACCACATCCCTGGTGAGAAT
CCACATAAAATGATACACGAAATGCCACCGCAACCACTTTCACCGACAAC
CAACAGTGGTGGTGGGCGCCGAAAGAGGGCGTACGCCCCATTGTTACCAA
ATGAAGAACCACCACATTTGAAATACACCAAAGTGAAGCGAATCGATGGT
AGCAAGTTGACAGCACAAAAAGTCCTCCAAGGTTCTTGATTACTTGTATG
CCATTGCACAATCACATTCATTTTGTCATTCTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002702XLOC_002702Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004774-proteinTCONS_00004774-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004774-exon-sc0000048-1575043694:130964..131016TCONS_00004774-exon-sc0000048-1575043694:130964..131016Clytia hemisphaericaexon
TCONS_00004774-exon-sc0000048-1575043694:127388..128601TCONS_00004774-exon-sc0000048-1575043694:127388..128601Clytia hemisphaericaexon
TCONS_00004774-exon-sc0000048-1575043694:126098..127077TCONS_00004774-exon-sc0000048-1575043694:126098..127077Clytia hemisphaericaexon
TCONS_00004774-exon-sc0000048-1510915933:130964..131016TCONS_00004774-exon-sc0000048-1510915933:130964..131016Clytia hemisphaericaexon
TCONS_00004774-exon-sc0000048-1510915933:127388..128601TCONS_00004774-exon-sc0000048-1510915933:127388..128601Clytia hemisphaericaexon
TCONS_00004774-exon-sc0000048-1510915933:126098..127077TCONS_00004774-exon-sc0000048-1510915933:126098..127077Clytia hemisphaericaexon
TCONS_00004774-exon-sc0000048-1491911889:130964..131016TCONS_00004774-exon-sc0000048-1491911889:130964..131016Clytia hemisphaericaexon
TCONS_00004774-exon-sc0000048-1491911889:127388..128601TCONS_00004774-exon-sc0000048-1491911889:127388..128601Clytia hemisphaericaexon
TCONS_00004774-exon-sc0000048-1491911889:126098..127077TCONS_00004774-exon-sc0000048-1491911889:126098..127077Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000048supercontigsc0000048:126098..131016 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.04311e-05 0.00123414 1.1286e-06 9.80803e-06 0.648981 4.00702 0.00226087 5.45488e-09 0.000252645 1.76759 1.04755e-05 3.30156e-09 3.63553e-10 0 0.783295 1.33594 0 1.12628e-05 3.46008e-07 8.65106e-07 1.04981 5.27852e-05 5.32999e-07 1.40403e-07 0.000117721 2.11241e-05 5.53594e-10 2.64722 3.2395 1.28737e-07
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004774 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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