TCONS_00004906 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004906
Unique NameTCONS_00004906
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2479

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004906 ID=TCONS_00004906|Name=TCONS_00004906|organism=Clytia hemisphaerica|type=transcript|length=2479bp
ttttggaactgCACAAAACAAACAGACAAACAAACTACTCCTCATCATAC
TGTCATACTAACAACTAAAGGAGCAAAGACATCAGCCATTTAGCATTTAT
AACATGTCAATAATGGAGCAATATTCTTGTGATTGTCTGAATATAATTGC
AAACGTTCGTGGAAAACGAGAGACTTCTGGTCGTGATCtggtttcttttc
aaaattttaacaatGAAGATCAATTTTTCAGTAAAACTCTTCTAGATGTT
GATCTTGGTGTCAGTGGTATTGAAGTTGCTCAAGAGATCTTGACAAAAGA
ACGAGTGTATGGTGATTGGATTGTAAATACATGTTTGAATTGTTCCAGGG
ATGTTTATTGTATGCATAGTTCTAAGGGTTTAGAACGTGTTTTACTATCT
AATGATTTAGTGTGTAACAAAGATTTGGAGACTGATATAAAAAGTTCATC
AACATTTTCCAACATATTCAGACTAAAACTTGGCGATTTCAAGTGTCAAC
CAACTCAAACACTAAGTGCAAAAACTGTTACATCAGTATCAACAAAATTG
AATGCTTACGCAGAGAAGTTACTTGCAACTGAAGAAGAAGCAATGCTTGA
GCGAATCagGTTGTTTACAGAAACACAAGAAATGCAGCTCCATGAATTTA
AATTGAACACTCAGAAACACAAGGAACAACTGCTAAGGTCAGtaagaaaa
catgaaaatagCCAAATGGACTCTTTATTCGACTCTTTCAACGAGTCATA
TTTTGGTGATCCTAAGCAATCAGAGGAAAGAGATCTATCAACAGATCTAC
CTAAAATTCATAAAGGTAAAAGCATTCCAGCTAAAGGTTCACTGAGTGCC
AATTTAGACAGCAGTAATGTAGCTCAATCTCTGCCCACAACATCCTTCAT
GCCCCCGTACAAATCAAGGAATTATCCAAGTGGTAGCCGTAGAAACAACC
GTTCAAGGAGTTTATCAGAATCTGATGACATCATGTTTGATATTGAAGGG
TTTCATGAAGACAAAAGTTGTGAACCTTTTTATGAGTCGGATGAAGATGA
AAGTGGAGATGCAACGAGTCTTGAGAGTAGTGGTGGTTATTCAATCCCTT
CATCAGCAACCAATCGTGGATTGAATCCTGGTGATCGTGTCTATGCAACC
TCAGTCCCAGTCTCCATCCCATTATTTGAAAATGTGAAGAATTCATATGA
CCCTGAAAGTGATGAGGAAGAAGAGGTATACTCTCCATCGCCCAACCATA
TTGCAGATTCCATAAAAGCATTGGCAAAGAGCATGCAGGATTCCACTAGT
ATGTTTGGGGAGTTGCCACGCCCAAGGTTGAACACTGGAACAAGGAGATA
GAAAATTAAAAGAGACAATCCAAGGTATAGCTCAATTAACCGAGTAATTT
GTTCCTTtacctttttattttgttttctattGTTCATTTTTTCGTGTTTG
ATAGATTTAGTTAATTGTCTTTATTTATGTTCTACATATATATTACTGAC
CAAGGTTtctaaaaaggaaaaacattttcatttttcacaccACAACGACT
TTAGCTAAAGTTGCGCACTAAATCATCATTCTCAAGCCCTTTTTAAGTCT
GCAAATATTTGATCGTCCAATTCCTACAATTTTAGGCAACTTATGAATGG
AGCTAAGTATGTTGTGGATTTATGTTTAtgcgttttattttgtttttgta
caGTGCTTTCTTTCCATTTGTATATTACTTTTCATCCTAAGTCTCTGTTC
TTTAATTTCAGTGTACTACAAAGTTTGGAATTTCAATTTTGCTGCGCAAG
GTGAAATTTCCTTTGTAATTGTAGTGTCAAAATGTTTAGAATAAGCATTT
AGAGTTTCTCTTATAgagtaaatatttttgaatcatTGTTATGATAAAAT
AATAGGATTTGATCTTCTCATATACATATTTTTTGCCAGTGTATTTTTTA
CAGATTATACTTTTACGctactgtttttttttacagttcgttttgaaaaa
ataaaattttaaaaaagaatttatttttaaaaagattaggATTTTTACAT
CACATAACAGATGGTATAAAGTCTAACTGAACTTAACGGGCTGGCTTAAC
TTACTCCATAAAGTTCGGTGATAGTTAGACTTAAAAAAACGTTATTGTGA
TCCAAGTCAATTTCATTTAATATCACATCCGTATTATATCAAGTATAGGA
ACAATTTACATTATATCCATTCCCAAAGAAATATTCCAGCATTATACTTA
GTTTTTGATTATGGTTTAGTTTTCCATTTTCTAGTTTGTTGTAGAACTGT
AAAACATATATTCCAGGTGTATTATAGGAAGatgtaaaatattatttttt
atgaaaatcttttCCTTTTGTATTTCTTGTTTTGGGTACCCTGAAGGCCA
CCATCCTGGTAGACTAGATGACGCGATATTTTACTGAACTCATCGTCATC
AAATGTCACCATAAAAAAACAGAATTCAT
Run BLAST on NCBI

transcript from alignment at sc0000049:217965..237296-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004906 ID=TCONS_00004906|Name=TCONS_00004906|organism=Clytia hemisphaerica|type=transcript|length=19332bp|location=Sequence derived from alignment at sc0000049:217965..237296- (Clytia hemisphaerica)
TTTTGGAACTGCACAAAACAAACAGACAAACAAACTACTCCTCATCATAC
TGTCATACTAACAACTAAAGGAGCAAAGACATCAGCCATTTAGCATTTAT
AACATGTCAATAATGGAGCAATATTCTTGTGATTGTCTGAATATAATTGC
AAACGTTCGTGGAAAACGAGAGACTTCTGGTCGTGATCTGGTTTCTTTTC
AAAATTTTAACAATGAAGATCAATTTTTCAGTAAAACTCTTCTAGATGTT
GATCTTGGTGTCAGTGGTATTGAAGTTGTAAGTTTTTTTCTATTTTTATT
CCTGTCTATCTTTTCATTGTTCTCATATAATAATCTCTTTTGCTGAACAT
ATACCTTTTGTGAGAGCAAGGGATACTGTAAGTTGGTCTAATAAGGCAGT
TTGGGAAATTGCATGCATAGATCCTCAACATTGCGAAATTTCGCATTTTT
TGCGTTGTCATATTCCCTAGCCTATGTACCAAAACCGGCATCGCAGGGCC
TGCCCTGGATGGACCGGGGTCCCAAAATAATGTGCATTTTGAAGGCCAGA
AATCCGCGCTCGATAGGATCGATCATCGGAACAGCTCGATGACGGATCGA
TGGTGAAGGCTTCTTCATAAAGACGAAAGACATGTATCTATTTTTCGAAT
CCGGTATGCGGGAATAGTGTCAGGACCTGCAGGCGACCTGGTAGCGTTGG
GTATGGGTGTGGTTACGTATCAGATTGGTTAGGAATTGGGTTATTATCAG
TTAGGGTTAGGAGGGTTGGAGCTCGAAACAAGCACTCTTTTGTAATTTTC
TCTTAATCCAGGCGTAGTTAATCGATATAATCGATAATCTTGAGTAATCG
ATAAATAATCGATAAGTAATCGATGGATTAGATATCGATTAACCGATAGA
ATCGATAGGTAATCGATACTCAAGATTCAAGATACGCTCGATTATTTATC
GATCAATTTTCTCATCGATTGTTTATCGATTATAGATCGATTATACTTCG
ATTAAATTAAGTATCGATTAAAAATCGATCGGCTANNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATCGA
CGCAGAAATTTAAGGAAGATTCCAAAAATACAAAAACGAAGCAAGCAAAA
GTATTTGTATCAAAGGTTATGGCCCTATTGGAGAACTGTCGGTATCTTGA
CACCTCTACTACAACTAGGTCAACCCGGTCAAAATCGAAAAAGAATTATC
CACCGTATCATACTTGTTTGCCCCTTTTTCGAATTTCCGCTTGCAGAAAT
ATTTGCACCCCTGTCTTTATCTGATATTCCGATGGCGTATTGGCGGCCGC
CCACGCTCAAGCTCTAAAGGAGCGGACCAATATTTATTTATTTTTTATTT
TATTTATTAAAGGATTTACAGTCCAGGCACACTAGGGCCTCTAAACCGGT
TTATCTACATAGTGATTACAAAAGTGATCTTGAATCGTAACGTAACGGGT
GCTTTATCCATGCTTGAGTCAGTTCTTCTTTAAATGCTTTGATTGACTAT
ATACCTAATATACAATATATAAAATATGCCCGACCTTCAGAGCAAAGCGT
GTCGTAGCATATTTCCACATCTGGTACCAGATAACCCTGTCTCAGAGATG
ATTTAAGCCAGGGGATGCGAGACCTCTGAGAGAATGAACAGCATATGAAC
GAACGGGAAATTATATCTTGCTTCATACTGTACCTTGTCTCATTATCAAG
CCTTTAGAAATAATCCCTTTCGTCAAAGACATTTCCTAGGAAGGACGAGA
GATCAAGGCGTCCATTTCTTTAATAAACGTTCTATCTTATCCTGTTGTAA
AGTGTTTGTAGCCTTACCCTTCCCACTATCTTCTTCTGAAAAATAATACA
TGACATATAAACTGCTAAATTATCACTATACAAAATATACAAAGACGTTG
TATTCACATGAACAATGAGTGACTATTAACATTTGAANTACTCTGAACAC
TAACAAGCCTCTTGGGATAGTGTGGGAGTAATTAAAAATGACATGATGAC
GGCATTTGATATTTCTTGATTATTAAATAATTAACTCCTTTCCATTTCTC
GGTTCCGTATCACTTAACAACGCCTTCAACTTGGGGCGCAAATGGACGAT
TCGTGTTTTAATGCGAACAATTTTCCGCCCTAACTTTAGAATGAAAATAT
GAAGAATAGACATTGCTTTTTGTTTAGTGAACCAAAGATTGTATACAACT
GGCTTTCGTAGAACACAATGCCAAAGGAATCTTCAATCACGGTCGCTTCA
TTATTTCTTATTCGGTATTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGAAAGCGGGT
GTTTATTCAAAGTAATACGATCGGTATGAGATTTGGCGAATTCCAGAAAT
GTTCTTTACTTCATTAAATACCTTATCTTGGCCCTTTTTACCCCGGACCT
TATTAGCGTTATTTTTGGGCTCGTTGGTGGAATAAGGGCCGGCGCAAAAA
GGGCCGGTAATGTAGTCAATAGTAGGTCACGATCGATATATAATCGATAA
CGATACGTGATCGAAGATAAGTAAATAACTGATAAGTAATCAATGCATGA
ACGATAAGTAATCGATGATTGTTAACAATCNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCT
ATCGGTTAATCGATATCTAATCCATCGATTACTTATCGATTATTTATCGA
TTACTCAAGATTATCGATTATATCGATTAACTACGCCTGGCTTAATACAG
TCTGGTCTGCAGTTTGTACAATATAATAAATAGCCGTCAGAAGCGCTATC
CTGGCATGAATCTGTGGCGCAGTGGATAAGGCAATGGGTTTCAAAACATC
GGAACTTTGCATTTAGTGGGTTCGAATCCCACCGGTGGCGATCTGTCTGT
AAGTCATTCAGTAAGTTAGAAAACATAGAAAATAACTACGTTTCAAAGGT
CTTTGAAAAGATTGTACGAGCCAAGATACAGAATCATCTAGAAGAAAACA
ATCTGTATAACAATAATCAACATGGCTTTAGGAAAGNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNAAGAAGTATTCAAAAAACACTTAG
ACACCTTCCTCACAACTGTTCCGGACGAACCTCTGCTTGCCCACTATTTT
AACCTTAGGCAAGCTGACTCCAACAGTCTCAAAGAAATGTCAAAGCATCG
GACTCAACGAGTTGGATGAGCTGTTCTAGCAAAAGCCAAAAAGAGGTACA
AAGAGGTATAGGTAACTCACAAAGAACCAGAAAGTCAGAAAGACTATGAA
CAAGAGATGGAAAGTACGAAATAAGTCCAGATCTGTCTTTCGTCTTTGTG
AAGAAGCCACAACCGTGATCGATGGATTACTTAACGATCCGGATAGGATA
TCGATAGAGGATCGATACTCAAGATTTCTTTAAGCTTATGATTAGTTATC
GATTATTTATCGATCTATCATCAATCTTTTATCGATCTTATCGACCCTAT
CGTAGCCATTCCAGGGTCAAATTGAAACTATTCTGGTGGCAATCAAACCT
AGTTCATCTTGTAGAGCTTCAAAAAAGAAAAGAAATGAGGGGTCATACAC
CTCCTAATAATAAGCGGTTCCGGAGATTTTGGTTCTGCTAAAATAGCACC
TTTTTAGACATTTGAAGTTGACAATTTAGCCCAGAAATGGCATATAAAAT
GGCACCGAAATATGCTGCAAAAATTGAAAATTCAAGCTTTTGTATTGAGT
CAAGATATTCCAGATATCTTCATTTTGACTGCAGACTTTTATCAAATTCT
TTTTGTTAATTCCTGCGATAATGGAATTATTATGTATACGTTTTTGAGCT
GTGATAAAAGGGATATGTCCGAAATATAATGTACTATCAAATGAAGCTAA
GATAATGAAAGAGAGCAACACAAGAAATGACACAGTGTGAATTTGAGTAT
CGAAAATATATTGAAAACACGAATAGAGTAACATACGTATAACGCGAAGC
TGACGGGTTTTGGGGTAACATTGGGGTTGTGCCAAGACTAATTGATGAGA
ACTGAGAGAACATGAAATCATCCAGTTACGAAGTAACCCAGATTAGCCCC
AGTGCAGCCCCAAGTACCGTCAAACTCAACTATTTTAATATTTTGTCACA
CGGGTCCCAAACTGAAGTCGTAGAAGTCACTTTAGCCATGGCTCGCTGGA
ACTTTTCAATCAAATCGTCTGAAACTCTGAGATAGCGAATGTAGCAGTCA
CTTGACCACCTGCCTAAAATTTTAATCAGTGCATCAGAGGCGCCGGCGGA
TAGTGCAGCAGAGGCATCTCCAATCTGAAAACTATGTGAAGAAATATTGT
GAATATTAGATAGTGCGTTTTTGAGCAATTTGTTGATATGTCTCCTAGTG
AGAAGACGTCCGTCGCTAAATCGAAATAAAGGCAAGTCAGCAATTGGTAA
GCTTCTAAAATAAGCCAGCATGGCCCGTACCGGGCAAAATAGGGTGGGGA
TAGCGCTAATGCGGATGACCGTGCCAATTCGGAAGGGATCTGTTTTACTT
CCTTTGAGACGCAAAAACATGATAGTGCGTTGAAGATTGAAAGAAATATC
ACTTTGTAACAGGTGTAGGGTAGAGTCATACCGAGTCTGAGTTGGAGATG
TATATTCTGAAACTCTCAACAGGCCATAGAACGCTGTGTGGATAGCTGCC
ATGTACATAAGCTTATCTACGAAGGGCATATTAGATGTACGTATAAAAGT
GATGATTATTGTCATATGCTGGATGGTGATGGGTGTACGTGGTTTCTTTC
TAAGGGAATTACCCTGAACCCGACGAATGCCCCTAAGGGTGCGAAATAAG
ATAGGGAAGTGAGCCAGAGTGTGATGATAACCAAGTAGTATATTTTGATG
TAGAACTCCAAAAAGGTAGACTTTAATAGTACCATAAGATATGCGACGAT
TTGCTTCAGCCGTAACAAAATAGCAAAGTGAAGCTTCAGTAATAGGAAAC
GAACAGATACCTATAGAGCCACAAAAACGCAAATAAGAAGAAACACCAGA
AAGGTACGTGCTCGTAGTAGACTGTGCCAGGGATTGGTCTAAGTATCCTG
CCAGAGATTTCCCAAGATGTCCAAAGCGACTGAGGCACCGGTGTGGGAGA
AGCATCTGCTGAAGGGCAAATTGAGAGAAAACGCTCTACCTGTAAACGAG
AAAGATGGTCTGCATAAGGATTTAACACTCCAGGAACGTGCTTGAAGACG
ATAGACAAATTCAAACTGGTACAGAGAAAAAACAAAGCCCTAACCAAAGC
CATGATCGGTTTGTCTCGTGTAGAACCAGAAGCCCAGATAGCCACAATAG
CCTCATTGTCTGTAAAAATGATGATGTACTTGTTAACCAGAGCCGAAGAC
CAGCACGAGATGGCTGTGAAAACTGCAAAAAGTTCCAAAAGAGCAACATT
AATACCCACAGTGCTAAAAGGCCAAGCCACTGAGACCCAAGCTCCCTGAA
AAAAGGCACCTAAACCAAGCCCTGAAGCATCAGTGAATAGATCAAAGTCG
GGAGAAGAAATAGCGCGATCTTGAAAGAGGGCAGAGCCATTCCAGGAATC
TAGAAAGACAAACCACATGGCTAAATCCTTACGGATAGAAGATGAGATGT
CAATGTGATGGTGAAGAGACTTGACCGAATGAGCTAAATCAATCATGCGA
CGAAGAAAGATTCTACCTGGTCGAATCACACGGCAGGCAAAAGATAAAGA
CCCAATTAGAGAGAGCAATTCCCTTTTGGTGCACTTGCGTCTGGATGACC
ACAAGATAACCAAACCTTTGAGTTCCAGAAGCTTTGTGGGGGGGACCCTT
AACAAGCAAGCCTGTATTCAATATGGCGAATGGAAAGGCGAAAAGGTCTA
TTCAATTGCGTTCGATTGCGTTCGATTGCGTTCAATTGAGATCGTCTGGA
GTTGATTGTCTATTTTTTACTGCCATCTTTATTTTGACGGTTAGAAAGTA
GTATGGTCCGATCAACAATACGTCTGAACCGGGCGACGTTTCCCAACAAC
AACGACAATCGAACCAGTCGAACAACAATCGAACCAGTCGAACAACAATC
GAACCAGTCGAACAACAATCGAACCAATCAAATATTACCCAGAATTTTGA
CATTCGATTGAGATTCGATTGCATTTGACACTGGTTCGATTGTCGATTCC
ATTCGATTAAGATCGTCTGGACATATCGATTCTTCCCATGAAGAACCCCC
CCACCCCACCTCTTAACGTCCTAGTTTAAACAGTCCGTCATAGTGCCTTA
CAAAAGTTGTCTTTTTGATTTTCCAAACATTCGTCTCAAGCGTTCACTTC
CACAATAATTTATGTAAATTTCAATTTCTGTCAGTCCACAGTCAGGTTCA
ACATAATATACGTGTGTTTTTATTCACATGACCGAAGTGCCTACTAAGAC
AATCCGGGGATAAGTGGCGAAGCAAAATAGCAGATTATTCCTAAAGTAAA
TAAATATATTTCATTATATTTCCTTAATTCAAAAATCAAAAATTCATTTT
ATGATCGCAAAAAAGTAAAAAAATGAATTAATATTACATAATAAAGCTCC
CCCGTCTTTTACTCTCGTCTAATTTCCCATCTCGGGACATGCAAAACACC
CGTCCGCCTAATATCCACCCAATCATCTTAAATTCACTTTAATTGTGCTT
TGACTTTCGAAAAATAGTATTCAAAAACTATGAATTTATAATAATTACAA
AAAACAAAAAGTTCGATACTTCATCAGTGAAATATTCAATAAAATTCTAG
TTTCAATTTTCAGTGGGCGTTATTCTAGCGCTTTGTTGATCGCGCAATTT
TTGCGTCACACCAACTTTCTCGGCCACTCGTAATAATTATGCATTGCCAA
ATTTGGTTCCCATTGTGAAGTCAGGATCAATGGTGATGTCACCTAAGCAT
AAAAAAGAAAGGATTTTGTCAGTTTTATGCATATATCAATTTGCGAGATA
TTCTATTCGCCGCACGAGCGCACTTTTCGTAGACTAGTCGGAATACCTTC
TTTTACTCACGGGGTTGATGATAACTGTTCATCTTCGTTATTTTTAAAAT
GAAGCACAACCGAGAAAAAACGAAGCTTCAAAAAGTTGCGTATTTCCAGT
GAGTATTAAACGATAACGAAATTGATGATGATGATGATTTTTTTTCAGTC
AGGCAATTGTGATGCACTGTTAAAAATTATCAAAAATCTATGAAACTCTA
AATTTTCTCCTTCACTTTCATTGTTGTTTTGTCAGCCATCTTCAATTGGG
CCATTCCAGAATTTGTCTGTAACAGGGGGCAGACGACACAGGATTTCCGA
GGGCAAAATTATTTTACCAAAATTCGAAATTTCCAAGGCAAGTAAAAAAT
GTATGAATTTCCAAGGCAATTGAATTAAAAAGCCAAAAAAGAGTGGAATT
TCTGATGCATTTTGCAAAATTACATGGATTTTCATAGGAATTTCCGACCA
CCACTGGAAAAGAAGGATTATTTCCAAGGCTAGAAAAAATTAAAAAATGC
ACGTCGTCTGACAGGGGTAACAAAAATTTTCTGGAATGGCCCATTTCGCT
ATGGCTTGATGCTCGGTGTTTACATTTTAAAAATAATGGAGATGATTTCT
AAACTTTTTTTCGGAAAGTTGCCAGAATTAATTATCTCCTTAATCATAAT
CAACAGAATAGCAACATTTCACAAAAAAAAGACAGACCTTCTGTGAAATT
CAAGGGCTACGCGGACCATCTAAACAAAAGAATACGAGACATAAACATCA
GGCCGTTTGTTTTTGTTCTATAAAATAGCAAAGCGAACAAATACAGAATT
CGGGCCCTCGGATGATCTCACATAGCAGCATCACTAGTACGGTAGCAGCG
TACCTCAGACCTTCAGTCACCTTGACTTACTTCTATTTACTGAAACCCCT
GCCTGTCTGAACTTGTAAAAATTATTTTATATTCTAGGCTCAAGAGATCT
TGACAAAAGAACGAGTGTATGGTGATTGGATTGTAAATACATGTTTGAAT
TGTTCCAGGGATGTTTATTGTATGCATAGTTCTAAGGGTTTAGAACGTGT
TTTACTATCTAATGATTTAGTGGTAAGTTGCATTACTAAAAGTGTTGAAC
TTGATTCGTGTATAGATCTCTCTTTTACTTTAAGAAAAAAGTCTTTAAAC
CTTTAATAAAGTTCAATTTTGAAAGAGATTTTGTGCTTGTTAGTAACTTA
ATCAGGATCGAAATATTATCAATCAAATACTGTAGAAAAGATTTAGAAAT
CATTTAAAAATAGAGAAAACAAAATGAAAGAATTTAGCTTTATGCTAGGA
TCAAGTTTCAACTCGAACGTCGAAGCATCTTTAATTTTAGAACCAATGTG
AAATAATTTTAAAAAAATATTCAGTTAAAAAATACAGCTTAAAACTTTTT
TCTGGCTGACTAAAATGTTTTTGTGATTTGTTTAATTATGCCTTGCTTTG
TGATGATAAACATCTCGATAATAATCTTTGGGATATAACTTTCCATTTAA
TTATATTTTTGAAAAACAGTGACGTTTTTCTAAGATCAAAGAATAAAGTG
TGTGAAAAGTGGAATCACAACGCTGTTCTTCAAGAAGTTTGTTTTTCAGG
GTCAGCACAGCATTAATTCAAATTGTATATTGTGTTTTAAAGAATTTGAT
ACACTTTCCAAATAACATCTTTGTTTCTCTGTTTTAGTGTAACAAAGATT
TGGAGACTGATATAAAAAGTTCATCAACATTTTCCAACATATTCAGACTA
AAACTTGGCGATTTCAAGTGTCAACCAAGTAAGTCCCTAGAATTTTTGAA
TTGAAGAATTGTTCCATAAAAGTCTGGCTGTTCAATTCTATTCATTTGTA
AGTTGAAATGGAAGTTTTCCTAATTACCTTTTTATCATGGTTATGGTGGT
AGAAACTCAATTTGAATTTCAGTTTGTAAACTCAATTTTGTGAAATGAAC
TGAAGCAGAATAAGCAGCAAATGGTAAAACCCTAAGATTTGAAGATTTTC
CATTTAAGTAAGGTTTTTTCAGGGTAAAAGATGTGTGAAAAACAGCCTTC
TATGGTGGGACTTTTAATGTTGGGAGAGAAAAATACTTGGAACCCTTCAA
TGAGAGTATATGAAAAATAACTACAGGTTTTTAATCTCATTTTTAGCTCA
AACACTAAGTGCAAAAACTGTTACATCAGTATCAACAAAATTGAATGCTT
ACGCAGAGAAGTTACTTGCAACTGAAGAAGAAGCAATGCTTGAGCGAATC
AGGTTTTTAGATTTTTTCCCTTCCTTTTTGGACCTTCCTTAAGGTAGTCC
TTTAAATTAACCCTTGTCCGTTCGTCCGTCTGTTGCCAGCTTTTCTCGGG
ATTGGCTCATTAGTTTTTTCTGATTTTTTGCACAATGATGCAAAATGGCA
ATGCCCAAAATGTGACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAAAAACTGGTTTTTTGGCACTTTCTCGAGATTTTATCATTAGTTTTTTC
TGATTTTTTGCTCAAAGATGCGTATTAACAATGCCCAAAACATGACCGAG
TCCGATTTTTGAGAAAAAATTTTTCCAGAAATATGCCGGAAATTGCCGTT
TTTCTGGATTTTCATTGGACTTCTTCCTTATAATTGGTTGTTTTTTCATT
CCAAAAAATTATTAATAGCAATGCCCACCATCAAGTATGTTCCAATTTTC
AATGAAATTGATTTTTAAAGCCGGAACTATTCAAAAATCGCCAGGCCAAC
TTATTTTCGCCGGAAAGACAGTATTTCTTGAATTTCTTGAGCTCTACCTT
ATATTTTTTTATGAAATTTTGCACACTGATGCAAAATGACAATACCATTT
TATTCCGGCCGGAAATATGCTGGAAAAACCGGTTTTTTGACATTTTCTCG
AATTTTCATCCTTGTTTTTCTCTGATTTTTTGCGAATGATGCGTATTGGC
GTATTCGCAATGCTCAAAACATGACCGAGTTCGATTTTTGAGAAAATGTT
TTTTCCGGCCAAAAAAGCTGGAAATTTCCGTTTTTGCAGATTTTCATTGG
ATTTTTTCGTTTCATGTCTTTGTTTTTTTCAAACAAAAATATAATTTATA
AGAGAATGTCCGCGATTAAGCATGGTTCAATTTTCAATGAAATGATTTTG
GTACAGGAACTTTCTAAAAATCGCCAGAACAGCCGAGAATTGCCGGATTC
CATGAATTTCTCGAGTTGCTCTCGTATTATTCTGCATTTTCATACTATTG
TTCTCATTTTTCAATTGTCTTATTATATCAATCTTCAGGTGGTCCATTCA
GCATGTAGCTTGTTTCAATTGTTATATTCTTTGAAGTCAGTTGTTTTTTC
TTGATTAAGTCTTTACTTGTCATTTTAGTTATCTTTGAATTATTTCGATG
TATTTTCCTATGTGTGACATAGCTACCACTACCTTTGAATAAGCTTAGAT
GCTGAATAAGTTGATAAGATAAGTTTTAACAGTATTTGTTTAAAACCTTT
CCCTTTATTTAAAATTTTCCAGACATGGTTAATTTAAATTTTTCTCTTTG
ATTTAGTTGTTGGTGGCCTGCCTGTTGTTTATACCTTTTTATACCATGTG
AAAAGAAAAGGCTAAACCAAATCCTATCTTTCAGGTTGTTTACAGAAACA
CAAGAAATGCAGCTCCATGAATTTAAATTGAACACTCAGAAACACAAGGA
ACAACTGCTAAGGTATCAATTATAATTTTTTACATTCTCTTTGATTTTTC
AAAAGTAGCATACATTGTCATCAGAAAATATTTTGACTTATCTGGAGTTC
ACATAATTTTAACTATGTTCGTTATTAGCTAGCTCCCTGCTTTCCATGTG
ATTGGCTCATAGAGTTTTTTTTCTGACTTTTTACACAAAGATATCACCAT
AATAAACCCTCTTATCTAGCAGCCCCTTATTTTCAAATAAAAATTTCACC
AAACATCAGCTGGTTGTTCAATTTTTCCTGATGTTTATTATAGATCAAAT
TCTTTTCAAGAATTTAATGCTTTATAAGAGGTGTTTTTACTGACTCAAGG
GTTGACAATTTTCTATATTTTAAGAAAGGAATGATATTTCACTTTGATTA
AACAGATTGGTCCGTAAAAGTAAAGTATCTAATCACTTCTTTCTTTTTAT
TTTATCGGCTTTTATTATACATAAGTTTGTTGAAATTTAGTGAGTTGTTA
AAGAGATTCTGTCTTGAAATTTCAGGTCAGTAAGAAAACATGAAAATAGC
CAAATGGACTCTTTATTCGACTCTTTCAACGAGTCATATTTTGGTGATCC
TAAGCAATCAGAGGAAAGAGATCTATCAACAGATCTACCTAAAATTCATA
AAGGTACAATTCAAATTATTACTGGGATTTTTTGAATGACCATTTTGCTT
GATAATTTACAAATGATACATATTATTTTCCCCTTTTCCTTAAAAAAGTG
ATATGATACAGGCTCTTTGGACTTTCTATTAAGACTCATGCATATACCTT
TTTGCTAAAAAATGATAAAGAAATGTTCTTGGGTGTTAAGATCACTATGA
TAAATTATCTATCATCGGATCTACCTAAAATTCACAAAGGTACAAACAGG
TACAAATAAAACTNTTTCTCTTTGATTTTTCAAAAGCAGCATACATTGTC
ATCAGAAAATATTTTGACTTATCTGGAGTTCACATAATTTTAACTCTGTT
CGTTATTAGCTAGCTCCCTCCTTTCCATGTGATTGGCTCATAGAGTTTTT
TTTCTGACTTTTTTCACAAAGATATCACCATAATAAACCCTCTTATCTAG
CAGCCCCTTATTTTCAAATAAAAATTTCACCAAACATCAGCTGGTTGTTC
AATTTTTCCTGATGTTTATTATAGATCAAATTCTTTTCAAGAATTTAATG
CTTTATAAGAGGTGTTTTTACTGACTCAAGGGTTGACAATTTTCTATATT
TTAAGAAAGGAATGATATTTCACTTTGATTAAACAGATTGGTCCGTAAAA
GTAAAGTATCTAATCACTTCTTTCTTTTTATTTTATCGGCTTTTATTATA
CATAAGTTTGTTGAAATTTAGTGAGTTGTTAAAGAGATTCTGTCTTGAAA
TTTCAGGTCAGTAAGAAAACATGAAAATAGCCAAATGGACTCTTTATTCG
ACTCTTTCAACGAGTCATATTTTGGTGATCCTAAGCAATCAGAGGAAAGA
GATCTATCAACAGATCTACCTAAAATTCATAAAGGTACAATTCAAATTAT
TACTGGGATTTTTTGAATGACCATTTTGCTTGATAATTTACAAATGATTC
ATATTATTTTCCCCTTTTCCTTAAAAAAGTGATATGATACAGGCTCTTTG
GACTTTCTATTAAGACTCGTGCATATACCTTTTTGCTAAAAAATGATAAA
GGAATGTTCTTGGGTGTTAAGATCACTATGATAAATTATCTATCATCGGA
TCTACCTAAAATTCACAAAGGTACAAACAGGTACAAATAAAACTTTTACT
GGGGATTTTGTTAATGACCATTTGTCGTGAAAATTTAGATATTATAAATA
ATATTTTCCCTTTTTCCCTTACAAAGTGTATAACTTTTGTGCTCTCAATG
GAAAGTTGGAAAGTACAAAAACCCATACACAAAGGATGTTTGGGTGTTTT
GTTTTGAAAAAGATTCACCCATGTTATACAAAATAAGTATACAATTTTGA
TAACCATCCATTTGTTACTCTAGGTAAAAGCATTCCAGCTAAAGGTTCAC
TGAGTGCCAATTTAGACAGCAGTAATGTAGCTCAATCTCTGCCCACAACA
TCCTTCATGCCCCCGTACAAATCAAGGAATTATCCAAGTGGTAGCCGTAG
AAACAACCGTTCAAGGAGTTTATCAGAATCTGATGACATCATGTTTGATA
TTGAAGGGTTTCATGAAGACAAAAGTTGTGAACCTTTTTATGAGTCGGAT
GAAGATGAAAGTGGTATGTTAAATTGATGTTTTGAGTTTACTACTATCTT
TTACAATCTACCAATATAAAATCAATTTTTTGGAAAGTATTTACAATAAT
TATTTCTATCAACAAGCTCATACATGTTTTTTATAAGCATACAAAAATCC
AAAAACTGGCTCGGAGAAGTTGTAGGGAAATTCCAAAAATCCGTAAAATC
CCAGCGAAAAATAACCAAGATCAGAAAATATAGGCTGAGCTAAACGTTTA
GCATATGCTTAAATTTTTGCCATATCTGCATTTATTTACTAATCTTTTTG
AAAGAAGCCTTTTAGTATAACATCGACCCAATTTCTTTTACTTGTAGGAG
ATGCAACGAGTCTTGAGAGTAGTGGTGGTTATTCAATCCCTTCATCAGCA
ACCAATCGTGGATTGAATCCTGGTGATCGTGTCTATGCAACCTCAGTCCC
AGTCTCCATCCCATTATTTGAAAATGTGAAGAATTCATATGACCCTGAAA
GTGATGAGGAAGAAGAGGTTTGATTTTATTCTGAATTTTCATTTTCATCT
TGCCCTGATGGTCATTTTGCAAAAATTCATCCGTTAAATACTGATAGCTT
TTTTTAACGGTGATAATATGGATTTAAAATCTCTTAAAGTACGTAAAAGT
TACAGAAAGCAAAATTTTACTATAGCCTAACAATCGTTTTTGTTTTCAAG
CGGTAATATTTACAACAATTTTATTTTTTTTATTTCATTCCCAGGTATAC
TCTCCATCGCCCAACCATATTGCAGATTCCATAAAAGCATTGGCAAAGAG
CATGCAGGATTCCACTAGTATGTTTGGGGAGTTGCCACGCCCAAGGTTGA
ACACTGGAACAAGGAGATAGAAAATTAAAAGGTTTTTCCANGTATGTTTG
GGGAGTTGCCCCGCCCAAGGTTGAACACTGGAACAAGGAGATAGAAAATT
AAAAGGTTTTTCCATTATATTTTTGTATATAGATTTTAAAGGTGTTAGTA
GATTTTTTAAAAGTTGAAAACCAACTTCAAGTTAAAGATTTCTTCAGAAT
TTTACTACATTTCTCTTTAGGTACAGTTTGAAAAAAATTTATTTTTATTT
TTACTGTATTTTCAGAGACAATCCAAGGTATAGCTCAATTAACCGAGTAA
TTTGTTCCTTTACCTTTTTATTTTGTTTTCTATTGTTCATTTTTTCGTGT
TTGATAGATTTAGTTAATTGTCTTTATTTATGTTCTACATATATATTACT
GACCAAGGTTTCTAAAAAGGAAAAACATTTTCATTTTTCACACCACAACG
ACTTTAGCTAAAGTTGCGCACTAAATCATCATTCTCAAGCCCTTTTTAAG
TCTGCAAATATTTGATCGTCCAATTCCTACAATTTTAGGCAACTTATGAA
TGGAGCTAAGTATGTTGTGGATTTATGTTTATGCGTTTTATTTTGTTTTT
GTACAGTGCTTTCTTTCCATTTGTATATTACTTTTCATCCTAAGTCTCTG
TTCTTTAATTTCAGTGTACTACAAAGTTTGGAATTTCAATTTTGCTGCGC
AAGGTGAAATTTCCTTTGTAATTGTAGTGTCAAAATGTTTAGAATAAGCA
TTTAGAGTTTCTCTTATAGAGTAAATATTTTTGAATCATTGTTATGATAA
AATAATAGGATTTGATCTTCTCATATACATATTTTTTGCCAGTGTATTTT
TTACAGATTATACTTTTACGCTACTGTTTTTTTTTACAGTTCGTTTTGAA
AAAATAAAATTTTAAAAAAGAATTTATTTTTAAAAAGATTAGGATTTTTA
CATCACATAACAGATGGTATAAAGTCTAACTGAACTTAACGGGCTGGCTT
AACTTACTCCATAAAGTTCGGTGATAGTTAGACTTAAAAAAACGTTATTG
TGATCCAAGTCAATTTCATTTAATATCACATCCGTATTATATCAAGTATA
GGAACAATTTACATTATATCCATTCCCAAAGAAATATTCCAGCATTATAC
TTAGTTTTTGATTATGGTTTAGTTTTCCATTTTCTAGTTTGTTGTAGAAC
TGTAAAACATATATTCCAGGTGTATTATAGGAAGATGTAAAATATTATTT
TTTATGAAAATCTTTTCCTTTTGTATTTCTTGTTTTGGGTACCCTGAAGG
CCACCATCCTGGTAGACTAGATGACGCGATATTTTACTGAACTCATCGTC
ATCAAATGTCACCATAAAAAAACAGAATTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002776XLOC_002776Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004906-exon-sc0000049-1575043694:237020..237296TCONS_00004906-exon-sc0000049-1575043694:237020..237296Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1575043694:225125..225259TCONS_00004906-exon-sc0000049-1575043694:225125..225259Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1575043694:224419..224509TCONS_00004906-exon-sc0000049-1575043694:224419..224509Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1575043694:223945..224050TCONS_00004906-exon-sc0000049-1575043694:223945..224050Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1575043694:222435..222512TCONS_00004906-exon-sc0000049-1575043694:222435..222512Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1575043694:221794..221921TCONS_00004906-exon-sc0000049-1575043694:221794..221921Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1575043694:220184..220423TCONS_00004906-exon-sc0000049-1575043694:220184..220423Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1575043694:219680..219849TCONS_00004906-exon-sc0000049-1575043694:219680..219849Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1575043694:219316..219452TCONS_00004906-exon-sc0000049-1575043694:219316..219452Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1575043694:217965..219081TCONS_00004906-exon-sc0000049-1575043694:217965..219081Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1510915933:237020..237296TCONS_00004906-exon-sc0000049-1510915933:237020..237296Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1510915933:225125..225259TCONS_00004906-exon-sc0000049-1510915933:225125..225259Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1510915933:224419..224509TCONS_00004906-exon-sc0000049-1510915933:224419..224509Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1510915933:223945..224050TCONS_00004906-exon-sc0000049-1510915933:223945..224050Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1510915933:222435..222512TCONS_00004906-exon-sc0000049-1510915933:222435..222512Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1510915933:221794..221921TCONS_00004906-exon-sc0000049-1510915933:221794..221921Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1510915933:220184..220423TCONS_00004906-exon-sc0000049-1510915933:220184..220423Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1510915933:219680..219849TCONS_00004906-exon-sc0000049-1510915933:219680..219849Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1510915933:219316..219452TCONS_00004906-exon-sc0000049-1510915933:219316..219452Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1510915933:217965..219081TCONS_00004906-exon-sc0000049-1510915933:217965..219081Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1491911889:237020..237296TCONS_00004906-exon-sc0000049-1491911889:237020..237296Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1491911889:225125..225259TCONS_00004906-exon-sc0000049-1491911889:225125..225259Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1491911889:224419..224509TCONS_00004906-exon-sc0000049-1491911889:224419..224509Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1491911889:223945..224050TCONS_00004906-exon-sc0000049-1491911889:223945..224050Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1491911889:222435..222512TCONS_00004906-exon-sc0000049-1491911889:222435..222512Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1491911889:221794..221921TCONS_00004906-exon-sc0000049-1491911889:221794..221921Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1491911889:220184..220423TCONS_00004906-exon-sc0000049-1491911889:220184..220423Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1491911889:219680..219849TCONS_00004906-exon-sc0000049-1491911889:219680..219849Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1491911889:219316..219452TCONS_00004906-exon-sc0000049-1491911889:219316..219452Clytia hemisphaericaexon
TCONS_00004906-exon-sc0000049-1491911889:217965..219081TCONS_00004906-exon-sc0000049-1491911889:217965..219081Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000049supercontigsc0000049:217965..237296 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.36754e-06	0.840648	0.735127	2.40535	3.57639	0.794332	3.9681	4.10846	3.08184	3.06721	3.70534	2.54551	4.09243	5.93195	4.08356	4.48493	1.98689	4.56556	2.32383	3.13342	4.66564	5.22061	3.52542	3.16979	3.70369	2.76452	1.61915	2.78629	1.36913	1.41308
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004906 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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