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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005201 ID=TCONS_00005201|Name=TCONS_00005201|organism=Clytia hemisphaerica|type=transcript|length=232bp
AACAAGCTTCGATTATTCAACGAGAAGTATTTCATCCACCTCCTCATCAG
AAAATCAACAACATCCTAAATACAACAATAACGAGAGTTTTTCAATCGCT
ACATTTATCGGAGGATATTTCGGTGGAATGATGACAGTTCTTGTGATCAC
ATCTGTCATTTTCATCCTCTTGAAATGTTTCAGAAAAACCAAGATTGGTG
TCGAAAAAGGGATTGGTTTATCTGACGTGACG Run BLAST on NCBI transcript from alignment at sc0000051:429476..431407- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005201 ID=TCONS_00005201|Name=TCONS_00005201|organism=Clytia hemisphaerica|type=transcript|length=1932bp|location=Sequence derived from alignment at sc0000051:429476..431407- (Clytia hemisphaerica)
AACAAGCTTCGATTATTCAACGAGAAGTATTTCATCCACCTCCTCATCAG
AAAATCAACAACATCCTAAATACAACAATAACGGTATGTAATCCTAAGTC
TCTTACTTCTTTCTCAAACAAAAGTAGTTCCCTTCCAAACCTTACAAGTT
GTTATGTCAAACTTANACTTCTTTCTCAAACAAAAATAGTTCCCTTCCAA
ACCTTACAAGTTGTTATGTCACACTTCTATGATCTTTTGTTAAAGATCTT
ATACATGAATTTAGACTAGCACGCGTCTACCTTTCCTTAGACACACGAAC
GCGCGGGAAAAGTACTTACCGTATCGGGGAAAAAATGTCGGAGGAAAGTG
ACGAAAATTTTGAGGGGGTGACCAAATTTTTCCCCGACGAAATATTTCCC
CGATATTTTATCACCCGACCAAAACTTGCACCCGATTTTTTTATCCCCGA
CCAAAACATTTATCCGAAGTTTTATACCGCAACCAAAATTTCAAATCGAA
TATTTTTACACCTTTATTTACCGAAATTAGTGCTTTAAACGTCGAATTAC
AAGATCTATTTTCGAGCTAGTTAAGGAAACCATTTCTTTTGGACAGTTTA
GTCGGTGGAAAGTGACGAATTTGAAATTTTTGTAGGGGAAAAGTGAAGAA
TTTTAAATTTTGGTCGGGGGAAAATGACGAAAATGCCTCTAGGTGACGAA
AATTTTCCCCGACTAAATAAAACTCCGACATTTTTTTTCCCCGATAAGGT
ATAAAATATTCTTATAAAAAATAGAAGCTGCCGCGGGAAATTTGGTTTGG
AAACTCGGGAGATTATTAGTAAGAAGCTACATGTTTTTTTTATAAGCATT
GCACTTATAAGCATATCTAGGCTCAGATATGGGGAAAAATTAAGCATACG
GCAAGCATTGCTTGAGCCTACAAACAATATATTTTTCCTGATTTTGGCTT
TTTTTGGCTGGAATTTCACGGATTTTCAGTATTTCCCTAAATTTATGCTT
TAGATTTAAGCATCCTCTCAACCATTTTTCAGCCTTATTAAGCTTTCGAC
CTAAGCATCTCTGAGCCTGTTTTCAGAATTTTGTATGCTTATAAAAAAAA
ACATGNTTTCAGCCTTATTAAGCTTTCGACCTAAGCATCTCTGAGCCTGT
TTTCAGAATTTTGTATGCTTATTAAAAAAAAACATGTATTTTTAGTAAGC
ACTCTGCTGAGTAGAAAAAGCACTCCACCGTTTATTTAGTAAATATCGCC
TTTTGGATCTAGTCGTTGTATTCAGTATACGTAATGAGCCCATTGCAAGC
AAAAGTTGCAGCGAAATACAACGACGTGGTAGTAGTTTAACATGAATTTG
TCTTTTTCAGAGAGTTTTTCAATCGCTACATTTATCGGAGGATATTTCGG
TGGAATGATGACAGTTCTTGTGATCACATCTGTCATTTTCATCCTCTTGA
AATGTTTCAGAAAAACCAAGATTGGTGTCGAAAAAGGTAATTGATTTGAA
TGTGACATTTTGAATCCTATCCTTGAGAAATTTTGATTTCATTATCAAGC
GAGGAATTTATGTTTTTTTTTCAATGTGTCCATGCAAGAGTGAAGGTTTT
TTAAAGCATTGACTTTAAAACCCCGAACGCGCTAGACCCGAAACTACAGG
ATATTTCCCATCCACGCGTGACCTGCTAGGCTTTTACACAAACGCCAGAT
TGAAAGTAAAGCCTATGGCCATATTTCGAAAAATATACCACTTTCAAAAA
CAAAGAAAAGGCTAAACTCAATCCGCCATTCTAAATGCGCCACAAATCTT
AAAGCTTTCTTGAAAAAGGTTAAAGATTCATTTCTAGCCCCTTCCAGGCT
TTAAACTCGATGTTTTAAAGTTCTTTAGATTATGTATGTTTTTTATCTTT
CATTCTTAGGGATTGGTTTATCTGACGTGACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005201-exon-sc0000051-1575043694:431325..431407 | TCONS_00005201-exon-sc0000051-1575043694:431325..431407 | Clytia hemisphaerica | exon |
| TCONS_00005201-exon-sc0000051-1575043694:429922..430047 | TCONS_00005201-exon-sc0000051-1575043694:429922..430047 | Clytia hemisphaerica | exon |
| TCONS_00005201-exon-sc0000051-1575043694:429476..429498 | TCONS_00005201-exon-sc0000051-1575043694:429476..429498 | Clytia hemisphaerica | exon |
| TCONS_00005201-exon-sc0000051-1510915933:431325..431407 | TCONS_00005201-exon-sc0000051-1510915933:431325..431407 | Clytia hemisphaerica | exon |
| TCONS_00005201-exon-sc0000051-1510915933:429922..430047 | TCONS_00005201-exon-sc0000051-1510915933:429922..430047 | Clytia hemisphaerica | exon |
| TCONS_00005201-exon-sc0000051-1510915933:429476..429498 | TCONS_00005201-exon-sc0000051-1510915933:429476..429498 | Clytia hemisphaerica | exon |
| TCONS_00005201-exon-sc0000051-1491911889:431325..431407 | TCONS_00005201-exon-sc0000051-1491911889:431325..431407 | Clytia hemisphaerica | exon |
| TCONS_00005201-exon-sc0000051-1491911889:429922..430047 | TCONS_00005201-exon-sc0000051-1491911889:429922..430047 | Clytia hemisphaerica | exon |
| TCONS_00005201-exon-sc0000051-1491911889:429476..429498 | TCONS_00005201-exon-sc0000051-1491911889:429476..429498 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000051 | supercontig | sc0000051:429476..431407 - |
Blast
The following BLAST results are available for this feature:
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