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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005415 ID=TCONS_00005415|Name=TCONS_00005415|organism=Clytia hemisphaerica|type=transcript|length=988bp
GAAATGACAAACTCTCTCAACTTCATTCCAATCATACGGCTGAAATTCTG
GATTCTACGCTCAACGTATGGGTTGAGTGGTCTTCTCGTACCCCATGGTC
TTCTTGTACCCCATGGTCTTCTGGTTCCCCATGGTCGTCTTGTACCCCAT
GGTCGTCTTGTACCCCATGGTCGTCTGGTCCACCATGGTCTTCTGGTGCC
CCATGGTCGTCTTGTTCCCCAAGGTCGTCTTGTACCCCATGGTCGTCTGG
TCCACCATGGTCTTCTGGTGCCCCATGGTCGTCTTGTTCCCCAAGGTCTT
CTTGTACCCCATGGTCTTCTTGTTCCCCATGGTCGTCTGGTGCCCCATGG
TCTTCTAGTACCCCATGGTCGTCTAGTTCCCCAAGGTCTTGTACCCCATG
GTCTTCTGGTACCCCAAGGTCTTGTACCCCATGGTCGTCTAGTACTCCAC
CAGTATGGCCTGGTAGGACCCCAAGGATCGTATGTTGGTCGATCAGTATT
CCACGGTCGTCTGGTACTCCACCAGTAAGGTCGGGTGGGTCCCCAAGGAT
CATATGTTCGTGGTCGGTCAGTTCCACGGGGTGCCGTGCTCCACCAATAA
GGTCTTGTGGGTCCCCATGGATCGTATGTAGTTCTGGGTCGTCTTGGGGT
CCAGTAAGGTTGAACAATACGTTTTGCGTTGACTTTGTTATTGTTTCGGT
TTTCGGTGGGAGTTGGTTGGGTTACGTAAATTTCGTCATCTTCGTAATAG
TCTTCTTGAACTTCCACAACTGAAACAAATTattatctatattataatac
gcttaaatcggaactctcccattctcgcatgaggctttttcgctagggat
ttttaaatacacggcaatttttttcgcgcctttttgaTTGTATATTCAAT
TCTATTCGCCAAGTGCACTTCCATTCAAGAGAGCACATTTCTCCTTGATG
GAGAAACACAACTGACTGTGCAATAGCACTATCAGCAT Run BLAST on NCBI transcript from alignment at sc0000053:347277..348408+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005415 ID=TCONS_00005415|Name=TCONS_00005415|organism=Clytia hemisphaerica|type=transcript|length=1132bp|location=Sequence derived from alignment at sc0000053:347277..348408+ (Clytia hemisphaerica)
GAAATGACAAACTCTCTCAACTTCATTCCAATCATACGGCTGAAATTCTG
GATTCTACGCTCAACGTATGGGTTGAGTGGTCTTCTCGTACCCCATGGTC
TTCTTGTACCCCATGGTCTTCTTGTACCCCATGGTCGTCTTGTTCCCCAA
GGTCGTCTTGTACCCCAAGGTCTTCTGGTTCCCCATGGTCGTCTTGTACC
CCATGGTCGTCTTGTACCCCATGGTCGTCTGGTTCCCCAAGGTTTTCTGG
TACCCCAAGGTCTTCTGGTTCCCCATGGTCGTCTTGTACCCCATGGTCGT
CTTGTACCCCATGGTCGTCTGGTCCACCATGGTCTTCTGGTGCCCCATGG
TCGTCTTGTTCCCCAAGGTCGTCTTGTACCCCATGGTCGTCTGGTCCACC
ATGGTCTTCTGGTGCCCCATGGTCGTCTTGTTCCCCAAGGTCTTCTTGTA
CCCCATGGTCTTCTTGTTCCCCATGGTCGTCTGGTGCCCCATGGTCTTCT
AGTACCCCATGGTCGTCTAGTTCCCCAAGGTCTTGTACCCCATGGTCTTC
TGGTACCCCAAGGTCTTGTACCCCATGGTCGTCTAGTACTCCACCAGTAT
GGCCTGGTAGGACCCCAAGGATCGTATGTTGGTCGATCAGTATTCCACGG
TCGTCTGGTACTCCACCAGTAAGGTCGGGTGGGTCCCCAAGGATCATATG
TTCGTGGTCGGTCAGTTCCACGGGGTGCCGTGCTCCACCAATAAGGTCTT
GTGGGTCCCCATGGATCGTATGTAGTTCTGGGTCGTCTTGGGGTCCAGTA
AGGTTGAACAATACGTTTTGCGTTGACTTTGTTATTGTTTCGGTTTTCGG
TGGGAGTTGGTTGGGTTACGTAAATTTCGTCATCTTCGTAATAGTCTTCT
TGAACTTCCACAACTGAAACAAATTattatctatattataatacgcttaa
atcggaactctcccattctcgcatgaggctttttcgctagggatttttaa
atacacggcaatttttttcgcgcctttttgaTTGTATATTCAATTCTATT
CGCCAAGTGCACTTCCATTCAAGAGAGCACATTTCTCCTTGATGGAGAAA
CACAACTGACTGTGCAATAGCACTATCAGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005415-exon-sc0000053-1491911889:347277..347391 | TCONS_00005415-exon-sc0000053-1491911889:347277..347391 | Clytia hemisphaerica | exon |
| TCONS_00005415-exon-sc0000053-1510915933:347277..347391 | TCONS_00005415-exon-sc0000053-1510915933:347277..347391 | Clytia hemisphaerica | exon |
| TCONS_00005415-exon-sc0000053-1575043694:347277..347391 | TCONS_00005415-exon-sc0000053-1575043694:347277..347391 | Clytia hemisphaerica | exon |
| TCONS_00005415-exon-sc0000053-1491911889:347536..348408 | TCONS_00005415-exon-sc0000053-1491911889:347536..348408 | Clytia hemisphaerica | exon |
| TCONS_00005415-exon-sc0000053-1510915933:347536..348408 | TCONS_00005415-exon-sc0000053-1510915933:347536..348408 | Clytia hemisphaerica | exon |
| TCONS_00005415-exon-sc0000053-1575043694:347536..348408 | TCONS_00005415-exon-sc0000053-1575043694:347536..348408 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000053 | supercontig | sc0000053:347277..348408 + |
Blast
The following BLAST results are available for this feature:
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