TCONS_00005433 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005433
Unique NameTCONS_00005433
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1092

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005433 ID=TCONS_00005433|Name=TCONS_00005433|organism=Clytia hemisphaerica|type=transcript|length=1092bp
CTTTGGTGAGTGGGAcggtggaaaattattttcttgtaATCCGTCTTCTT
TTTTAACTTAGCtggatttcaaaatatatatagTGAAACGGTTGTCAACT
TGTAGTgagcaaaactttacgatatttTTGCTATATTCAAGTTACAAATT
TATGATTGTCATAATGTGAATGCAAAGCTTCATCAAAAGAAGATTGGTGG
ATCTTGTAAGAAATCATCAATAACGAAGCCATGCTGCTAACCAGATCGAA
ACGAAAGGCAAGACGGAGAAAAGGAAACATATCGATCACTCGCATACAAA
GAGATAGCGAAGAACAAACGACAAAATATTTGTTGTCAAAGATAAGAGAG
CTTGAGGAACAAAAGGAAGACCTAATAGACGAACGGCTGCAGCAAGCAAG
GACGTACGTTTACAAACGTGAGCTTTTACACGAAGTCACGAAGTGTGAAA
AGCTGAAGAATACGATGGAACAGAATGTAAAAGATTGGCGTAGAAATGTC
GCCATCATGGAAATGGATACTGAACATTTATTGAGAAGATCCAGaaagaa
atcaaaagaaactGAAAGGCTTCGTAAACTCTTGGAGAATCTTGAAGGCG
TGTCAAAAATGAAAGAGCTCAGAACATGTGGACGTGTCATCAATGGAGCA
GGATATCTGTCTTCACCAGACAATGATCGCCAACCAGAATCAAAGTATCA
AGAGTTTACAAAAGCAACTACGCAATATCAACAAGAGATACGACAGGAAG
AACACGAAGATAACACGTAAAACTCGAAACGTCGTAAagaaaacacaaga
ttttcaAGTGAAATGCGAAGAATACAACAATATGCTTGTGAAGCTGAACA
AAGAAACAGCCAATCGCTCAATCTATTGCCAACAACGATCACACGTGCCA
GAGAAAAGACTAGCAATACTACCACCACCTATACAAAAGACTGGAACTAG
CAAACCATTGGCTATCCAGTGGAagaaacaaaatggtagacgaGATACGA
CGAGGACAAGAAAAAGGGGGATTGttgaatcaaaacattcgatagACGTC
GAAATATCGAATTGGTTGGAAAATTTGACCATAGACAAGGAT
Run BLAST on NCBI

protein sequence of TCONS_00005433-protein

>TCONS_00005433-protein ID=TCONS_00005433-protein|Name=TCONS_00005433-protein|organism=Clytia hemisphaerica|type=polypeptide|length=179bp
MLLTRSKRKARRRKGNISITRIQRDSEEQTTKYLLSKIRELEEQKEDLID
ERLQQARTYVYKRELLHEVTKCEKLKNTMEQNVKDWRRNVAIMEMDTEHL
LRRSRKKSKETERLRKLLENLEGVSKMKELRTCGRVINGAGYLSSPDNDR
QPESKYQEFTKATTQYQQEIRQEEHEDNT
Run BLAST on NCBI

transcript from alignment at sc0000053:610160..625901+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005433 ID=TCONS_00005433|Name=TCONS_00005433|organism=Clytia hemisphaerica|type=transcript|length=15742bp|location=Sequence derived from alignment at sc0000053:610160..625901+ (Clytia hemisphaerica)
CTTTGGTGAGTGGGAcggtggaaaattattttcttgtaATCCGTCTTCTT TTTTAACTTAGCtggatttcaaaatatatatagTGAAACGGTTGTCAACT TGTAGTgagcaaaactttacgatatttTTGCTATATTCAAGTTACAAATT TATGATTGTCATAATGTGAATGCAAAGCTTCATCAAAAGAAGATTGGTGG ATCTTGTAAGAAATCATCAATAACGAAGCCATGCTGCTAACCAGGTAATA AGACTTGCTTACTACGAATTCAGGAGTTATATTTCAAACAGTCATATATC TCAAAGCCTTCCCAAGAATTCGTTCGAccactgttttaaattttaacatG GAATTCAAAAGGGGAGCGTCGTAGCCCCTAAAACAATATCTCTTATTGAC TTGCTATAAATACGACTAGCAGTCTAGTCTGAATTTACCTCAATCGAACG AGTACGTGTCAAGGGTCGACAACAGAATTAAAGacattttccttattttt tatttttgtcgtTTTATTGATTTTACGGGGTAGGCCAAACTCGAACCACT TGCAAAATTAATGATATCACATAAAAAGAGGCAACTCTCTCTAAGtcaac tctctataattcgaacctctataattcgagcctttctgtaattcgaactg aaATATTGACCCCCTCAGCTGGGAAGTAGTATAATaccctctataactcg aatctttcttttatttgataaaatgtGTTAGTCCCTTTCAAGATCGAGAG AGAGGCAACTGGATAGGTAATAATTTAGTTGGACGGTACCGTTTTAGATC GAAACGAAAGGCAAGACGGAGAAAAGGAAACATATCGATCACTCGCATAC AAAGAGATAGCGAAGAACAAACGACAAAATATTTGTTGTCAAAGATAAGA GAGCTTGAGGAACAAAAGGAAGACCTAATAGACGAACGGCTGCAGCAAGC AAGGTACAGAAGATTCTAAGAAAGTCAAGCTTGAGACTCAATTACTCAAA TCTAAATAACTCAGAAGACACATAATTCGAAGGGGGTAGATCGACGTCGA ACGTCCGTGACTTGTaccttcaaaaatttcaatttctataactcgaacct cagTGACTCGAACCTCAGTGACTCGAACCTCAGTGACTCGAACCTCAGTG ACTCGAACCTCAGTGACTCGAACCTCAGTGACTCGAACCTCAGTGACTCG AACCTCAGTGACTCGAACCTCAGTGACTCGAACCTCAGTGACTCGAACCT CAGTAACTCGAACATCAGTGACTCGAACCTCAGTGACTCGAACCTCAGTG ACTCGAACTCATCTTATGAAATTCGAACATCAACCTAGCCGTAGAGAAAG GGAGTACTTAGGTAAGTGAAGGGTTCTGGTATGTACCGCCCttttaaggg tacctttttggaacCTGAAAGCCCCTGTGAGAGTtgacaaaataaacaga aaataaaaggatagtataatttttgctccttgaaagatcgaaattcTGTC AAATTAGTCCAAAAGAAGGTATcgtaaaattaccaaaattttcctatttt ccccCTTTTAGTCCCGCTGAGGGTCCAACGCTCAACGTATTCCTGGAAGC TTTGAGACAGGAATGTCAAGTTCCGCATGATTTTAGGAGTCGTACTTTTT TGCACAGGACGTACGTTTACAAACGTGAGCTTTTACACGAAGTCACGAAG TGTGAAAAGCTGAAGAATACGATGGAACAGAATGTAAAAGATTGGCGTAG AAATGTCGCCATCATGGAAATGGATACTGAACATTTATTGAGAAGATCCA GGTATGATTAATTTTCACTTATTGGGCTCTTCTAGAAAATGTTCGTCTCA TGTAAGAGGGATATAGTTGGATAAGGGTTGAGGATTCAATGTCcagggta gtgaaaaatctaaaaaatgtgCCTTGaatgaggggggggggtaaatttaa tttgtttgtggggtaattttgaatatccAGGGGTCAATTGACACTTGTAC GGGTTAGATCTGTAAATTTCTAAAAGTAAGTAAAAAGTAACTGACCTTGA CGACTGACAGGGAGACGTCTTAGGAGTATTAGACACTAACTTTAGAAAAA TGGATTTGTTTGATCCCGTTAGAGactataaaaatattttttatgagtAG GAGACGTTTGTAAGCAACTGTCAAACTAGTTGAGTGAATAGTGGATAATC CATTAGTTTACCAGTTTAACTTGCAGACAACATTCGCTTGAGGTTACagt taactctctctaattcgaacctgtattattcgaatctttctctaattcga actaaaatattggtcctctcagttggaaagtggtttaaattaatcttttt ctaattagaagaaatttttgagtccatgaagatcgaattagagagagtaa aATGTACatcattttgtatcatttcagaaagaaatcaaaagaaactGAAA GGCTTCGTAAACTCTTGGAGAATCTTGAAGGCGTGTCAAAAATGAAAGAG CTCAGAACATGTGGACGTGTCATCAATGGAGCAGGATATCTGTCTTCACC AGACAATGATCGCCAACCAGAATCAAAGTATCAAGGTATATACAGAGAAG TCTCTTTAACTAgaaactctataactcgaacaagttttctcgtacCTTCA Ggtaacaataccttataaaaccttactccataactcgaaattttcttaac tcgaCCAAATTTGTGCGAGCTCGAGTTGTGAAGACTCCATTGTATTGGGT ATAAAGCCTGCCTCACTTGCATATGGGCACTACTTTTTTAGCAATTTCTA AAGCAGCCTTTCACCGTTGTANCGTATGTGGGCACTATGTTTTTAGCAAT TTCTGAGGCAGCCTTTCACCGTTTTAAAGGTAATTTCAAGGAGGATAATC TAAAAAATCAAAGCTTTCGAGAAACCCACTCTTTAAAACCGGCACTGTTC CTCTGATATCTCAATGTTAAGTTTGGTGCAGTGGAGTctcaataactcga acctcAATTAATTgaacgtctccttaactcgaacaaatttgtttgTCCCT TCAGATAAGAAACCCCTATAGataagtctccataactcgaatttttCATA ACTCGAACTAATTTGCGTTGTCCGTGCGTGTTCGCGTTATGAAGTTTTCA CTGTAGAATAATTTCTCTCATTTCAGAGTTTACAAAAGCAACTACGCAAT ATCAACAAGAGATACGACAGGAAGAACACGAAGATAACACGTAAAACTCG AAACGTCGTAAagaaaacacaagattttcaAGTGAAATGCGAAGAATACA ACAATATGCTTGTGGTAAGTTTTGAGTAAAACCCATATCCAGGGAAGAGG TTGGATAACCATTAACTTTTGAGGACAACGGAATGACTGAATCGATTCGG AAAAATccacagttctgacccgcaaaatagaggacggtaaaagtgctaat ttaccgtcgtcctcagttgatcaagatttagacaaatcagaagctaacgt ctccgtcgcagaaaaacacacataaaaTAAGCTTCAATCCCTCCCAATGT ACACGCCCCCGCCCCCGCCCAAATCTACAAAGTGGATTTTTCTTCCAATT TGGCGTTTGTGAGAAACAAGAGAATCACTTCCAGCTCCTTTGGAAGGTTT AAATTCCAACGGATGGTACAACACATCTTAGGAACAAGAGCAAACCACCT AGCGCTTGAGTCTGAAATCAGATTATTTAAAATGGACATCTCCTTTTAAA GGGAAGATTATTCATAAGCTTGGACCACCTAAAATAGACGATACAGCAAA ATGTCAGATTTTCCTTTGTCATGTGAGGTTTTAAGCGATTAAAGTGATTA GTATACTATAAAGTAAATTTAAAACGTAGTAGAAAAATATTTGGATAGCG ACAAAGGAAAAACTAACAAAAATCAATTAGggagaaaaaaaacttgaaac agTTTAGGTTAAACTACTTGAGTTTGACTTGATAATATTTTCCAGAATAA CATTTTAAATAACTGATCTAAAGTTGGTCTAAAAGTGACCTTAAAATTTA ACATTCCCTTATTCAAGAATATGAATATCTCTAACATTTCTGAGATTGTA CAGAGATTTGTACAGCACTGGATCAAAAGCTTGATCTCTGAAGGATTAAG GAGAAGGAAAATCACATTCCTGAAGATTTGACACACACGCGATATAgttt gaatcgcagacctctatagatatacttcctatatagaaATTCTTTTGCTA GAGGATAAACAGAAGCCTACAAGCGATAAGgagaaaatgtttcaaaaaga ttttgagaGAGATCAATAGTTTTGTTAAGCTCTATCTGCAAAGGTCCATT TATAAACCAAACTGCTTCAAAATCCATATGCTGAGTTTAATATTTGTATC TGATTGATTTGAATCGTTATCATAAATTTCTCGTACTTATTCATAATTTT GTATTGATAAATCTATCAATAAGATAAATTTTATTCATGGCCGTGTCTGT ATTATAGGTCATTATACAGTCGGTTGATTGTTATTTCCGAGTTTATCTTC GATTTTTACCGATGGCTGATGACAGATTGATGCAGTCTGTGCAAGTTTCT GTATTTTGTGATGGCTGGAGCGGACCCGCAGTTCTGATTAAACATGGTTA CATCTCACAGAGGGTTGGTCCCatagatatctaagcccgaagggctagat ttgcaactttaagctttctccagcaaaaaaaagtgaagcaaaaatttgac tttttaaatttcgtgccgatggataggatctagcattttaattgttttcg gagcgcgagatcaaaatacgtaggcggcaaacgctatttcacatctctca aaccggtgaaattgcatattttagtcacgtgactctggtaggaaattgTT AGCCGAAGCTAACAAAACTGTCCTGGGGGTTCAGAATTAAATAGAGAGCA ATAGAATGtgctttttatagatttttactACAATGTCCTAAGTTCATAAT GTCTAGTTCCATattaaaaaattctcttttttctaaTTAAATAGTTGCGG CTAGATACAAAGAATAACCTTCAGCATAATGCCGAAGGTGGGCCGTATTT CATATAGCTGCCTGAcagaaatccttccaaagatgagcttcactttttga taaaagccgcaaatctagcccttcgggctttacagatatctgtggttggT CCCCTAGTAAGAGTAACTACAACCATATTTTACGAAATAACTTTATGAGG CACGAATATCCCATTCGTAAGGGTCAGTAATCAGATTGGAACTCGATATG ACTCAAACTCGTAACCAATGCGCGGACCATCCGTGGTTTTTCCTCCACTT TCACACGTGCGAGTCCTCTTCATACATTAACGAAACAAATTGAACAATAA CAAAAACGCCAATAACGCCAATACCGCCCACAGCAAAAAAGCAACAGCAA CACTGTTTTTGCGTGCATAATTCTCTCCCTTTACGTTTACGGTAATACCA AACTGCAAAAATGACGCCAAGAACAACGACGAAAATACAGACGACTGTCG TCACAATCCATCCTAAATCCGACTCTTTTTTCAATCTGACGGATATGGGC GTTTCACAGAGTCCGCCCTCAAAGCCTGCAGTGCAGACACAGTTGTATTG GTCCGCTTCGATAACGCAAGTTGCGTTATTTTGACATCCGTTAAAATCAC ATTCAGTGCAATTAAGTTCTTTACGAGTGATCCATGCTATTGGGCGGCCT GTCAGTTCGGGTGGATTAGAGCAATGACCTTTAATTTTGCCATCTACACG TAACCATTTCAGTTTCAAGGATGTTAAATAACAATCGCAATGTAATGGGT TTTCATTCAAATTGATACTATCCGAAATATGAGTACCTTGAAAAGTGTCC GAGGAGAAATTCCGGATCAGATTGTTTTGTAAGTAGATATTAGTCAAATT GCCAATGTCTTGAAACGAGGCTGACCCAAGATGGTTGATTAGATTCGTGT TTAAAGCGATGATTTTTAACTGTCGGTTTTGAGCAAACAGGTGATTTGGT ATACTCGATATACTATTCGAAGAAACGCTCATTTTATTCAAATTGATTAA CTGGTTGAATACGTGTTTCGGTAATTCTCGTATAATATTATTATCCAGGT GTAAAAACCGCAAACGCCGTAACCCCGTAAAAGCGTTAACGTCAATTCTA CGTATTCGGTTATGCTGTATGTTCAAATGTAATAAAGCCGTATTATTGTA AAAATCGTCAGCTTTCAATCGTAAGATACCACTATCAcgcaaataaattt tttccaaattgaaaGCCGTTTCAAGTGACTGGCGGGATAAACTTTTCAAC AGGTAATTATCACTCATGTAAAGTTTACGTAATGTTGGTACGTGCACTGA TAAATTTTGTGGTAATTGTGTCAATTTGTTCTCGTTTAGATAAAGTACTT TTAGTCTGgtcaaatttgataaaagtctaGCCTTGAAGCTGGTTAAGCCG TTTTTAGAGAGATCCAGCCTTGTGATATTTTCTGGCATCTCTGATAAAGT TCTTTCCATTGCCACATGTGTAGGTAGATTTGCACATTTAGCTGACATAG CGGAGCAATGACATCCTTGTGGACATGACTCAACGAAGGGCACGAAAAAC AAAGTCAATAATATTCCCAATAGCAAATGAGACATCTTTGTAAGAATTCT TATTTGATTGAGCGCAGAATAATGGTACTTCAGGTTCTTTCAAAGATGGT TTAGCCAGTGAGACCAGAATTTCAGTTCGTATTGAAgaacaacttcaaac aataacAGTCATGCCAATTTCCCAGGAAAGCTATTCCACCAGTACTTCAA AAATCCACGTTAGGTCAACAGtgaaaaatcagattttctCGTGACagtaa aaaagtcaaataaatgACTAAATCTAACAAGAATGTAAAGCTAGCCAAAT CCAGCTCTCAGACAAATCCTTTTCAGTTAAGTATAAACTAACACACAGTT GAACGCCTAATGACATTCAATCCTCCACCACAACATACATAAATCACCTC TTTATTATCAAATCGCTTATAAAGACTTTTAAATCCACTCTGTTTCTCTT TCCTTCTTTACACATTTTTATAAGNAAAGACTTTTAAATCTACTCTGTTT CTCTTTCCTTCTttacacatttttataagaacataaggtatcgttggcca aaatatcaagaacaagttaagaacaacttaaggctttgtagactataaaa cacccaattccttaagaaaatgtgaaaataagaacatgttaagaacattt ttagggcttcttaaggcttcaaaaattttgtatgttcttataataaaacg tGTACATCTGTCTCCTTAGTGACTTGATTAGACGTAAACGGAACATACAA TGTTTTTGTATGTCCTCCTGTACTTAGGCTACACTCCTGCCGCCTTATAA GAATCTGAAAGTCTTTAAATAGGTACGTTTTAAGTGACGAACAGACATTG AAAACCGGATTTGGTTACGGTAAAAGACCGTTGATCTCCGGATAGAAATT CTTGCATGGTTGTCAtgattgacaaaaatacttCTGACTCCGGTATTCTC GACTGTGACTTCAACAGTACACCAGCGAGAACACTTCTTaagttttttga ctgttttcaaattttaaagaattaaaaacgcattttccaaaatcaaaacC AGGGATGAAAAAACGTCTGCAAATATTTACAGTGGTTTCTATATAAGGTC TCAAGACTAACCACGTAATAAGTTGGAGTTACTTTTGTACCTACTGTACG AAGAGCGTTGGTCTTTTCCCGTTATTAAAGCAGTACATAATAGGAAAGct tcccgggaatgagaaagtttaaTCGTTCTAATGTATACACCGCAAGGTAA ATGGACATTTTGTTCGAATCTGGTAGTGGATTTAGATGGTTTTTGGTTGA AatgattcttatagaaaacTACAAAATATGGCCAATAGTATTGAAACGTT CGAGAAACGTTCAAACGAACGTGTCAAGTCATATCAGACAAAGTAAACAG AACAAAATGAGTTTGTTGTTTTAACCTCTTGTAAATAAAAGTTAGAGGAA ACACTTTAATTAGAAATAAGGAAAATGGAACGTTGCCCGATTTTAGACTA AGGTTTCATACGGTTGCTTTAATGGATAGGTCTTTCGAGTTTTTGGGGTA TATGTTATACAAGTTTTCTATACGTGCATATTCGAATGTGTAAAAACATT TTGTCTGCAACTGAAATGTAAAATGCCTAAGACAGATGCATTGTCAGTGA TGTAGGACCATTTtgatattgggggggggggctaaagtTTAGTGAAATGT GAAAAATAGGCCTCTACATTGTTGTGAAATACACCAAATACAAATGaatt caagcaaaaaaatcatatttacttAGATGTTTTGGATAGCCGTCTTTAAA AGACCATCTTTGAAAAAGATATTTGGGGCAAAGTCTCCTggctagccccc ccccctatgCTACGGTACTgtgaatacactcttctcgagatgcataaatt tattgttgtactcgttttcaaacagattttattgctatgaaattatatat ttaaagcaatttaattcccaaaaggcaaacattaactctaaaagaaaagt acttgaaattgtCTCATAAGGTGTAAACAagacaattatcattgtgaata tgtaattttatagcaatgaaatctgatTGAAAACGaagacaacaataaat ttatgcatctcgagaagagtgtattatcTCATAGTTATAATTTTAACCAG CCTTAGATCCGCcactggaaagaaaaaaaaacatcagagAAGCAAACATA TTTATTAGGAAGGGAGGTACTAAAGATTAATTTATTAATCCTAATCgaaa agcacttcaaaagaTACCTGAACTAATCAGATCATAGAATACTAATCTTA GTTAATGAGTTTAGATTACCTATGTTAAATGAAAAAGGGGTGGAACATCA TTAAAAAAGTATAAACAAATTTCTAGGCCAGCTGAAACAAACTTTCAAGA GGTACATTGTATCAGCTATATATCTAATATTTTCATTCTTATAAAGCGGA CCGACCAGAAACCAGGTTGTTTCAaatgtatacacgtttttttttctatg gaaaacattctaaattttttaagccttcggatgttcttaaaaattttctt aatcaccactttgtgtttttttttgtacgATTTCCTTAGAAATTGGATAT TTTAGAGTCCGTGaacccttaaaatgttcttaactttttctcgATATATT GACATtcaagccttatgttcttatcaaaaagtATGTATGTAGCTTGCTAA CAGGTATCTTTCAAGGTAGACTTTAGAGTCTACTTCtagctgaactttgc tttttgatgattttgatggcactgagtccagtgaagtatcataatcgcgc catccagtctataaaaagctttaagtggacccagGACTACTTTCAAGGGG AACTTAGTGACACCCCCCCACTCCCGAATAAGCATTTAAACATTGATAAT TTGTTCAGGCAACAGGCTGTAAATGTCATTTGAGCTTTGAATTACTGTGA GCAGAGGGAGTATGATTATACAGTAGCGAATCCTGTCTTGATCATGATCG ATCTGGCAATTTTCCGAGTTGTTTTCGTGACGTTTTATACTCGATTCATA ATGTTAAATAATTCTTCAAAAGACTACATCAGAAGACCACAAGAATTTTG gatgatcttataaaaaaagagtataCAAAACGAGGATCATAAAAACAAAT GTAAAATAAGTTGGCAAAGCGATTCAGTATTTCGTAATTTAGCGTCAACT TGCAAGAATGACTAGAGATGGTCCAATATGATTTATCGTGCAGATATTTT TggacaaataaaaaatgaaagctCTAAATCAAATATCAAAAGGAAAGCAA TCGGCTTAGACGGGACAAATTAGCATTCTTGCATACCAGAATATACCTGC CAAAAGGATACTATCTAAACTCTAATTACATTAATTACTGTATTTTGTTT GCAATTTCTGGATTAACCTTCGATGGACATAGCGCGTATAGAAAATTTCA TCGTTTTCTTATTCTTCAcagtaatacacctttttgaccgtagccgcCGA TTGCCGTACAGCAAtaattttttgtccgctttatcccactaagaccgtcc cagtccttttttcgcatatatagacaatagaaaatagTGTcgaaaaagga ttggatcgagtttagggggataattaaataattaagtggcacgcgcctga ccgcgcgactacggtcgaaaaagtgtatttcatatatgaagaaaagaaag aactGTTAAAACCCATACTGTTGTCTGATGTCCAATGGCAGATTGGTGGT CGTTAATGCTAAAGCTATAAAGGAGTCAAATCCCCGTCAGAGAGGAATGA GAATCGGGTTCAACTGCCCTTGTACTTACACCTGAAGATCGTTCTTCTGG GACCCACTAATCTCAGAAGACGAGGGTTGGGGTTCAGGTAACTCACTACA AAATCCGTTACGTGGTCTTGCGAAATGTCGTAATTTAAACCTTTCCGATG TTGAACATTTTCCCGACCATCAGAGCTTTAGCGTTCCAGAAGAGAGCTAA ATAACATAGTTCGGACCCCCTTTCGTAAAGGAGGGTGACACCAGGAAGTC AAGGAGTCAggaattttcatgaaaaaggtgGGATAGCAAGGAAGGGGGGA TAGTTTAAAAAGGGGCGACTTATACATATAtgttgtagattattttcaag tactgttatgaaatttggtcttcatgagAGAAAGTATGAGAGAAAGTTTT CTcttagagtagtctgagtcaaaaagaagaaagaagtttattatttcgct ttctctctctaaagatatttcacatatattGGAGttggagagcgtcaact gtatgtggATTAAAATAGAACAAAGGGTCTATTTACCTTATCCATGGTAC ATAAACCTACCAAAACGAAGTTTATTTTCTACCAATAAATTCATGAAAAC TCTTTTCAGTTAGCCTAACTTTGATCATACATCTCCTTCAAAATGCAGTA CTTCACAAAAAATGGTGTGATTTTTAATGcttcaatttcaaagtttttgg cAAGTCATAGTCAAGCTGAGGAGAGAtttcacaaaatcaaaacaaatgtt atCGAGGTAACAGAAGGATTTTGTAGAAGCATGAagctttctatcaattt cacgTTAATACATATTAATATGAAAATGGCTTAGCTTGAGTGTCGCCATG TTTTATTACTTATCACCACTTACGTTCGGGTATATTTCTTGATGAACTTT CACACATACAAAGCAAgtaaactctcgcttattcgaacttctattattcg aatacTTCTATAATTTGAGCTTGTTTCCAGTCTCCGTCAAATATAAAGCC TCTTAAAATACGCTTTCTATTATTCAAacctctctgtaattcgaacaaat aagattccccttTTGAgatcgaattagcgagagtcaactgtatataaAAG CCTAAGACAGTGACAAAGAAAGAAATCTTCAAGGAAAGACCATCTTCTTT GTAACCTatcctccataactcgaacacactaTGCGTTCCCCGTGCTTATt caagttatagagactccactgtaccgTAGGGGGACTTAACTTTCTCCTTT CCAGGGGAAACACTTCTGGCGCATTTCCGGGATCTTTTCACTGTTTTTAA TGGCATACCGACAAAAATGATTTTCTGCTACGTACGACTGTGTGGACAAT ACTACTTACTTTTTACTTATACAGTAATACTTCAGGGACTTGACACTGAC CGTCTAACACATTGAAGTTATTTTTCGCCTAAGTAGAGTTTCAGCTTTTT CCCGTTGTGGTAATAGGAAAATTTAGCCAGAAATGAACAAGTTTACCCAT CCTAAAGTATACAATTTCATGATATGAACCATTCGTCTCAATAAAAAGgg tggagtaattagtttcaTGATGATTTACAAAATTCTTGGCAATGTAACGA TTCTTTATTATgacgaaaacaaaaacaactccATCTTAATTACAAAGGCA TTTTAATTAACAGCAAATCAAGAATTGTGCCAGATTTATCAGTTGACGGC TTTAATTAATtggtcaaaaattatttttttgatgaaattgaaataaGACA TACTAGCACGAGATCTTAAAACAGACCATGTAAATTATCAATTGACTTTT TGCGGTATAAAATGCAAGGTCGAGGTTGAGGCTGAGCTAGTCGGCATCGA ATGATGTCAAATACTCACTTAGTAAAAACCATTGCATTTATAAGCTTATC CTTTGCTTTGTAAAGCTTatggtgaaaaatatttgacatcATCCAACCCT ACTAGTAAATTAGAATCCAATACCCTTGAAGCGCTTAAATAGGATCAATC aagacttttttgattttttgattttgagcaACTAACTAGTGCAGaacaca aaaaaaagttaaaatcaaGAAGAATTTTACGAGTACCGTATTGGGTTtaa gtttttcattaaaaatatataGGATTATCAATTTGTTAAACAGTATAAAT ATGGATAATGAATGAATGTGATATAATAAAATAATTGATTCAGTGTTTGA TATTCCGCTTTTTAATAAACTTGATCGTACTCGCCAAACAACGATTGTAC ACCAGCCATCAGTAAAATCGTAAATGGAGTGCGTTGAGAAAGTGATTGTC CTTTTTCAAGCGTGTTCGTACATGTAGGACACAATACGTAACATAAAGaa caaaagtaaacaaagaataACAACAGTGatgaaacaacaacaacaacatt gtGTTTTGGTGATAACACAAAAAGACAATCCCTTTTGTTTACGGTGATAC CACCAACCAATCACCGAACAGATCACGGCCACCAAAACAATAATGATCAA AATAACAACCCAAAGGATTGTAGAATCTTCATCCTCGGTGATTGTCTGGC AAAATTTTCCTTGGTAACCTTTAAGGCATTGGCAGAAATAATAATCGTCT TTGATGATACAAGTAGCGTTGTTTTTACATTCGTTAAAATCACACGTTGT GCATCCTAACTCGTTCCGCTTGATCGATTTTAATGATCGGCCGGTGAATT GTAGCGGCGTCAGGCAGGCGCCGTTTAGTTTCCCTTGTGAGTTCAGTGTT CTGAGTTCGAAAGACGTTATAAAGCAACTGCAATGTATAGGATTACCTCT TAAATCGATTTCCTTGCTGATGTAAGAGTATTTAAATGCAGATTTGGAGA ACGATTCAAGTGAGTTATCAGCTAGGGAGATTGTTGTCACGTTCGGTAGA CTTTGGAAAGCTTGAGGACCAAGAGCTCTTAACTGGTTCCCTGTTAAGGA GATCAATTTGACTGATTTGAGTCCAGTGAAAACCTGGTTATGGATGTGGA TTAGATTGTTTGAGTTAATAAGGATGCGTTGTATACTGTTGAGCGGTTTG AAAGTTCCAGGTCTTAAATCCGAGATACGATTATTGTTCAAATCAAGGCT CACCAGTTTCCTTAATCCAGCAAAAACGTATTTCTCCATTGCAGCAATCT TGTTGCTAGCCAGATTCAATACAGTCAATTTAGAgttattataaaaaata ccATCGTGCAACAGATTTGAAATGCTACTGTCTTTAACATCCAGAACTTC CAAATTGTAGGCTCCTCCTAGAGCATGTTTGGTGAGATTCCTTAACAACG AGTTATGTCTGATGTGTAGCTTCTTCAAGCTCGGTACATGGTGAGATATC CCACTTGGTACAGAACTCAATTTATTTTCGTTCAAAACTAAAGTCTCTAA CTTGGTAAAATCTTTCAGTAATACCATATTGAAAGATGTTAGAACATTTT TGGATAGATCCAATTTCTTGATCGAGTTTGTCGATAGTCTTCTTAAAACG CCAGCCACACTCTGATCCGTCAACAGGCTACATTTGACTTTGTGGTCTGC GCATTCACATTGAAAAGGGCATTCTTGTACTGTAGAACTCACCAAACAAA ACACCAATAATATTAGAAAAAACTTCATGGTGCCACCTCCTTCCAAAGAT TAAACAGCCTACTGAAAACACTGAAAGTGAAACAACGTTAAAACCAAAAT GAACATTCTTAGGcgattcaattcaaaaaaaaaattcgatcaCTTTTTAA ATGATCGATTACGTCATTGTTATTCCATCCAAACAACGTAGGATAATCAC CATGTCCTGTTTAATTCATTTTCAGGGAGTTCATAAACCCTTTGTTTTGT ATAGAGTTTCAAGTTTGAAGTCAACATGCTAAACCCCCTGAATGACaaca atttgtcaaagatttacATTAGTATGTAATCATAAAAAATCTAGTGTAAA CTTTGTTTACTTCCCCTGTTTTGTTTATCTTATGGGTCGGTGTTCTTTCT TCATAAGAAACAATTCAAGTCCTTAATCTCAAAAACTGATAATTGTTACA TTTTATCCATGATTTATAGAGGTTTTGATCTGGTGAGGTCTCACACAGCT AAAATCCCCCAAAACGTGaagattaaaatttaaaaaagcaaagcaataat tttttcaaaaatggttagtttgcaaaatgcaaagtttttcttgttttttc ttgaaagcattttgttttgagtgcattttcaagcaatctagagcttaaat tttcaaaatcccccCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCTTGGGcaaaacc atggttggccctcgcagtgtcactaaacttcatcCGCCCCCCAataagaa aatgcttcctacggcgcTGCTTATACATGAAAATCAagtacatttttatc aaaacattgACTATTAGAGGACTTTACTAGAGATATTTTATAGAATATTA GAGAACTTTTCAAGAATCAGAACGataggatgttcttataaagaattaGA ATAACGAAACACAAACATATTGTCCATTGGAATGTAGGAAGGAAACGAAA TGGAGACAGTCACTCTATTAACAccgtgattcaaaatgaaaagttttaca AACAATTTTAGATGCCAAATTAAACAAAACAGCAACCAACGCGCAACCGA ACAGGTTAATCATTAAATAGGGGAGGAGTCAAAAGGATGAACATCTTGAT ATTACAATAATTGATGTTACCTTTAAAActttaactttaactttaaAATG TTATTGGGAGTAACGTTCTTATAAATTGgcttttccaagaaaaattgaCC TCCATCTTGAGGAGGCCCTGATTAAAACCTGTTAACTTCGAAGGTGGGGG TTGAGgttcaaataaaatttcatcaaaaagccAGGGGATGGTCTCTGAGA TTTAGACAAAAAATCCAATCAAATTTTCTCCCGCTTTTAGAAGCTGAACA AAGAAACAGCCAATCGCTCAATCTATTGCCAACAACGATCACACGTGCCA GAGAAAAGACTAGCAATACTACCACCACCTATACAAAAGACTGGAACTAG CAAACCATTGGCTATCCAGTGGAagaaacaaaatggtagacgaGATACGA CGAGGACAAGAAAAAGGGGGATTGttgaatcaaaacattcgatagACGTC GAAATATCGAATTGGTTGGAAAATTTGACCATAGACAAGGAT

Coding sequence (CDS) from alignment at sc0000053:610160..625901+

>TCONS_00005433 ID=TCONS_00005433|Name=TCONS_00005433|organism=Clytia hemisphaerica|type=CDS|length=2700bp|location=Sequence derived from alignment at sc0000053:610160..625901+ (Clytia hemisphaerica)
ATGCTGCTAACCAGATCGAAACGAAAGGCAAGACGGAGAAAAGGAAACAT
ATCGATCACTCGCATACAAAGAGATAGCGAAGAACAAACGACAAAATATT
TGTTGTCAAAGATAAGAGAGCTTGAGGAACAAAAGGAAGACCTAATAGAC
GAACGGCTGCAGCAAGCAAGGACGTACGTTTACAAACGTGAGCTTTTACA
CGAAGTCACGAAGTGTGAAAAGCTGAAGAATACGATGGAACAGAATGTAA
AAGATTGGCGTAGAAATGTCGCCATCATGGAAATGGATACTGAACATTTA
TTGAGAAGATCCAGaaagaaatcaaaagaaactGAAAGGCTTCGTAAACT
CTTGGAGAATCTTGAAGGCGTGTCAAAAATGAAAGAGCTCAGAACATGTG
GACGTGTCATCAATGGAGCAGGATATCTGTCTTCACCAGACAATGATCGC
CAACCAGAATCAAAGTATCAAGAGTTTACAAAAGCAACTACGCAATATCA
ACAAGAGATACGACAGGAAGAACACGAAGATAACACGTAAATGCTGCTAA
CCAGATCGAAACGAAAGGCAAGACGGAGAAAAGGAAACATATCGATCACT
CGCATACAAAGAGATAGCGAAGAACAAACGACAAAATATTTGTTGTCAAA
GATAAGAGAGCTTGAGGAACAAAAGGAAGACCTAATAGACGAACGGCTGC
AGCAAGCAAGGACGTACGTTTACAAACGTGAGCTTTTACACGAAGTCACG
AAGTGTGAAAAGCTGAAGAATACGATGGAACAGAATGTAAAAGATTGGCG
TAGAAATGTCGCCATCATGGAAATGGATACTGAACATTTATTGAGAAGAT
CCAGaaagaaatcaaaagaaactGAAAGGCTTCGTAAACTCTTGGAGAAT
CTTGAAGGCGTGTCAAAAATGAAAGAGCTCAGAACATGTGGACGTGTCAT
CAATGGAGCAGGATATCTGTCTTCACCAGACAATGATCGCCAACCAGAAT
CAAAGTATCAAGAGTTTACAAAAGCAACTACGCAATATCAACAAGAGATA
CGACAGGAAGAACACGAAGATAACACGTAAATGCTGCTAACCAGATCGAA
ACGAAAGGCAAGACGGAGAAAAGGAAACATATCGATCACTCGCATACAAA
GAGATAGCGAAGAACAAACGACAAAATATTTGTTGTCAAAGATAAGAGAG
CTTGAGGAACAAAAGGAAGACCTAATAGACGAACGGCTGCAGCAAGCAAG
GACGTACGTTTACAAACGTGAGCTTTTACACGAAGTCACGAAGTGTGAAA
AGCTGAAGAATACGATGGAACAGAATGTAAAAGATTGGCGTAGAAATGTC
GCCATCATGGAAATGGATACTGAACATTTATTGAGAAGATCCAGaaagaa
atcaaaagaaactGAAAGGCTTCGTAAACTCTTGGAGAATCTTGAAGGCG
TGTCAAAAATGAAAGAGCTCAGAACATGTGGACGTGTCATCAATGGAGCA
GGATATCTGTCTTCACCAGACAATGATCGCCAACCAGAATCAAAGTATCA
AGAGTTTACAAAAGCAACTACGCAATATCAACAAGAGATACGACAGGAAG
AACACGAAGATAACACGTAAATGCTGCTAACCAGATCGAAACGAAAGGCA
AGACGGAGAAAAGGAAACATATCGATCACTCGCATACAAAGAGATAGCGA
AGAACAAACGACAAAATATTTGTTGTCAAAGATAAGAGAGCTTGAGGAAC
AAAAGGAAGACCTAATAGACGAACGGCTGCAGCAAGCAAGGACGTACGTT
TACAAACGTGAGCTTTTACACGAAGTCACGAAGTGTGAAAAGCTGAAGAA
TACGATGGAACAGAATGTAAAAGATTGGCGTAGAAATGTCGCCATCATGG
AAATGGATACTGAACATTTATTGAGAAGATCCAGaaagaaatcaaaagaa
actGAAAGGCTTCGTAAACTCTTGGAGAATCTTGAAGGCGTGTCAAAAAT
GAAAGAGCTCAGAACATGTGGACGTGTCATCAATGGAGCAGGATATCTGT
CTTCACCAGACAATGATCGCCAACCAGAATCAAAGTATCAAGAGTTTACA
AAAGCAACTACGCAATATCAACAAGAGATACGACAGGAAGAACACGAAGA
TAACACGTAAATGCTGCTAACCAGATCGAAACGAAAGGCAAGACGGAGAA
AAGGAAACATATCGATCACTCGCATACAAAGAGATAGCGAAGAACAAACG
ACAAAATATTTGTTGTCAAAGATAAGAGAGCTTGAGGAACAAAAGGAAGA
CCTAATAGACGAACGGCTGCAGCAAGCAAGGACGTACGTTTACAAACGTG
AGCTTTTACACGAAGTCACGAAGTGTGAAAAGCTGAAGAATACGATGGAA
CAGAATGTAAAAGATTGGCGTAGAAATGTCGCCATCATGGAAATGGATAC
TGAACATTTATTGAGAAGATCCAGaaagaaatcaaaagaaactGAAAGGC
TTCGTAAACTCTTGGAGAATCTTGAAGGCGTGTCAAAAATGAAAGAGCTC
AGAACATGTGGACGTGTCATCAATGGAGCAGGATATCTGTCTTCACCAGA
CAATGATCGCCAACCAGAATCAAAGTATCAAGAGTTTACAAAAGCAACTA
CGCAATATCAACAAGAGATACGACAGGAAGAACACGAAGATAACACGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003095XLOC_003095Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005433-exon-sc0000053-1491911889:610160..610403TCONS_00005433-exon-sc0000053-1491911889:610160..610403Clytia hemisphaericaexon
TCONS_00005433-exon-sc0000053-1510915933:610160..610403TCONS_00005433-exon-sc0000053-1510915933:610160..610403Clytia hemisphaericaexon
TCONS_00005433-exon-sc0000053-1575043694:610160..610403TCONS_00005433-exon-sc0000053-1575043694:610160..610403Clytia hemisphaericaexon
TCONS_00005433-exon-sc0000053-1491911889:610957..611112TCONS_00005433-exon-sc0000053-1491911889:610957..611112Clytia hemisphaericaexon
TCONS_00005433-exon-sc0000053-1510915933:610957..611112TCONS_00005433-exon-sc0000053-1510915933:610957..611112Clytia hemisphaericaexon
TCONS_00005433-exon-sc0000053-1575043694:610957..611112TCONS_00005433-exon-sc0000053-1575043694:610957..611112Clytia hemisphaericaexon
TCONS_00005433-exon-sc0000053-1491911889:611817..611960TCONS_00005433-exon-sc0000053-1491911889:611817..611960Clytia hemisphaericaexon
TCONS_00005433-exon-sc0000053-1510915933:611817..611960TCONS_00005433-exon-sc0000053-1510915933:611817..611960Clytia hemisphaericaexon
TCONS_00005433-exon-sc0000053-1575043694:611817..611960TCONS_00005433-exon-sc0000053-1575043694:611817..611960Clytia hemisphaericaexon
TCONS_00005433-exon-sc0000053-1491911889:612587..612744TCONS_00005433-exon-sc0000053-1491911889:612587..612744Clytia hemisphaericaexon
TCONS_00005433-exon-sc0000053-1510915933:612587..612744TCONS_00005433-exon-sc0000053-1510915933:612587..612744Clytia hemisphaericaexon
TCONS_00005433-exon-sc0000053-1575043694:612587..612744TCONS_00005433-exon-sc0000053-1575043694:612587..612744Clytia hemisphaericaexon
TCONS_00005433-exon-sc0000053-1491911889:613336..613473TCONS_00005433-exon-sc0000053-1491911889:613336..613473Clytia hemisphaericaexon
TCONS_00005433-exon-sc0000053-1510915933:613336..613473TCONS_00005433-exon-sc0000053-1510915933:613336..613473Clytia hemisphaericaexon
TCONS_00005433-exon-sc0000053-1575043694:613336..613473TCONS_00005433-exon-sc0000053-1575043694:613336..613473Clytia hemisphaericaexon
TCONS_00005433-exon-sc0000053-1491911889:625650..625901TCONS_00005433-exon-sc0000053-1491911889:625650..625901Clytia hemisphaericaexon
TCONS_00005433-exon-sc0000053-1510915933:625650..625901TCONS_00005433-exon-sc0000053-1510915933:625650..625901Clytia hemisphaericaexon
TCONS_00005433-exon-sc0000053-1575043694:625650..625901TCONS_00005433-exon-sc0000053-1575043694:625650..625901Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005433-proteinTCONS_00005433-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000053supercontigsc0000053:610160..625901 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0401786 0.0391805 0.181969 0.133521 0 0 0.051656 0.0967194 0.0338578 0 0 0 0.374102 0.582763 0.182518 0.0979349 1.44777 1.97856 0.298976 0.7151 2.79698 3.35383 0.921361 2.01036 0.819623 1.73248 0.110186 0.0587966 0.0445952 0.0908708
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005433 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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