TCONS_00005439 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005439
Unique NameTCONS_00005439
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1795

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005439 ID=TCONS_00005439|Name=TCONS_00005439|organism=Clytia hemisphaerica|type=transcript|length=1795bp
TAAAAAAGTACGACTTGATTATGGATATCAGAGGGGAaacacaaaaatac
aaaaaaaacaaaaaactcaaagtcaaaaactcaaaatttcacGTCGAAAA
TACTCCGTATAATTATCCTCTCTTcactaaaaattctttaaactttgaaa
aacaacACAATATGGATGCGTCATTGAAACGAAGAAGCCCCTCATTGGAC
GAAGTTCAACCTAAAAGATCACGGTCAAACGTAGACGAACGTGAATTAAC
ACAATCATGCGTGGCTGGATCACGTAAAAGTCCCTTGGCTGTTACACAAA
CCAATACTATTGTAGCGGCTTTGAAGAAAATACACCCTGACTATGATTTC
CCAATTGAAACAATGCAAACACTTGGCGATAGAATTTTACATTTGGCATT
ACCAAAGATTGGTCAAAAAGGACTTTTCACAAAAGACTTGGAAAACGCCT
TGAACGAAAAACGTGTAGATTTCTTGGTGCACTCTCTAAAAGATTTGCCA
ACTAAAATGCCTGAAGGAATGGCCCTCGGATGTGTCTTCAAaCGCGATAA
CCCTTTTGATTGCGTTATATTCCACTCCAAACATGTTGGAAAGAAATTGG
AAGACTTGGCGCCAAACAGCGTCATCGGAACAAGTTCATTGCGTCGTGTG
GCACAACTAAAGCGAAAATACCCAACTCTCATTTTCCAAAGTGTCAGAGG
GAACTTGAACACTCGGTTACGAAAACTCGAGGAAGATGGAGTTTATGATG
CTATCATTCTTGCCAAAGCTGGCATTGACCGTATGAATTGGACAGAGAAA
ATTGGGCAGATCCTGGAAGAGGAAATTGCTTATGCTGTAGGACAGGGAGC
AATGGCTGTTGAGATTCGAGACGATGATCAATTTATGATGAAAGTTCTCA
GTAAGATTACAGATATGAAGACGATGTTGACGGTGATAGCTGAACGTGCG
TTCATGAGGAAGTTGGATGGTGGTTGCAGTACACCAGTCGGTTGTAATGT
TACTTACGAAGATGGAATGCTTCATCTTCGAGGAGTATGTTTAAGCGTTG
ATGGAAAAGATTGCGTCGAAGATCGTATGAGCGCCCCGATCAACTTCGAT
CTTCCACGACCGGAAGGAGAAAAAGAGAAAACGTTTTTCGTCTCAGACGT
TGGTGTAGTAGTAGATACTCTTTATAAAAACGAATACGAAAAAGCGACGA
AACTCGGCGACGACGTAGCCACAAAACTTATCGAACTCGGCGCTGATGAG
ATTTTAAAGACTGTTAAACTGGCTATCCCAAACGTAGCCAATATACAACT
CCCTGTAGCGAATAGTGGAACTATGAAATTTGTTTGAAAGCAGCAGTGAC
GTTGATGTGATAATTGTatattgtttttctttgaattgaGAGTATAGAgt
gaaattgtatattttttcaaatttggaatGGTCTATTTTGGATATTATTC
ATTGGATTGGTCGAAAAACCTGtatttaaagaaaatatcagCTGGACTGA
AAACACGATGATTTTTTAAgggtaaaaaatgtttttaagaacAAATGAAA
CGTGGTTAATTTGAGTTATTTTTATCGAAAAACAATTAATGAATTCGTGA
ATTGATGTTACCACGGGAAAGCGTCTTAACTCGTTTAAATTATTGAGCGC
TTAAAGTGTCTCGCTCTATGTACCTTAACCATTTAAAATCGTTGCTCAAA
GGGatatttttttaccaaattatgaaaacaaaaaatgtaaatgtttttat
ttggtaCAACAAACCTGAAAAGATCTTATTATTTTGTAATGTGGA
Run BLAST on NCBI

protein sequence of TCONS_00005439-protein

>TCONS_00005439-protein ID=TCONS_00005439-protein|Name=TCONS_00005439-protein|organism=Clytia hemisphaerica|type=polypeptide|length=444bp
KKYDLIMDIRGETQKYKKNKKLKVKNSKFHVENTPYNYPLFTKNSLNFEK
QHNMDASLKRRSPSLDEVQPKRSRSNVDERELTQSCVAGSRKSPLAVTQT
NTIVAALKKIHPDYDFPIETMQTLGDRILHLALPKIGQKGLFTKDLENAL
NEKRVDFLVHSLKDLPTKMPEGMALGCVFKRDNPFDCVIFHSKHVGKKLE
DLAPNSVIGTSSLRRVAQLKRKYPTLIFQSVRGNLNTRLRKLEEDGVYDA
IILAKAGIDRMNWTEKIGQILEEEIAYAVGQGAMAVEIRDDDQFMMKVLS
KITDMKTMLTVIAERAFMRKLDGGCSTPVGCNVTYEDGMLHLRGVCLSVD
GKDCVEDRMSAPINFDLPRPEGEKEKTFFVSDVGVVVDTLYKNEYEKATK
LGDDVATKLIELGADEILKTVKLAIPNVANIQLPVANSGTMKFV
Run BLAST on NCBI

transcript from alignment at sc0000053:732116..738544+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005439 ID=TCONS_00005439|Name=TCONS_00005439|organism=Clytia hemisphaerica|type=transcript|length=6429bp|location=Sequence derived from alignment at sc0000053:732116..738544+ (Clytia hemisphaerica)
TAAAAAAGTACGACTTGATTATGGATATCAGAGGTATGGCTGATTGATAT
TgataatgagatttttttcaattacgTTAATCATTTGGTCCTAGGAACTC
ATTTAAATTTCATCAGATTTCATAGATAATTATAGTTTTAAAGTATTGTG
TCGTTTCATTAGACGACTTGCATGATAAAGTTGCACACTACTCGATTTTG
ACTTgtcagaaattttttaaaggGTATTTCCAAATTATTCTTTTTATGTT
TCCTCTTTCGAAGACATTTTTACTGGTCCCTTTGTGTTTCAACAATGTAG
TTAATAGCGAGTTGATGTCTGTTTTTCTATGACCGAAACAGTTAGTTTCT
AAATTGACTACATCCTGAATGGTTGAGGACGGCGATAAacaagcactttt
accgtcctcgattttgcgggtcaaaattGCGGGTTATACCAAGTCGCTTC
GGTCACTCCGCCGTCCTCAAAACTTCAAATATATAAACAGATGATTTCTT
TAtcaatacttaaagtttcatgctCTTCGCAATCATCAGTTGATTTGAAA
TATGACAATACGAAACTGGCTATTATGTGCGACGTACGTGTGCTGTTTAG
AAGAATTATCTTTGTATTGTCTGTTAGTCTTTATTCTGATATTGATCATA
GAAACGCATGGATTTTTTGATAACTTCCTCATTAAGTATTACCGCTGTAT
TTcataacaaattatataatTAATTCTCTTACTTTCAGGGGAaacacaaa
aatacaaaaaaaacaaaaaactcaaagtcaaaaactcaaaatttcacGTC
GAAAATACTCCGTATAATTATCCTCTCTTcactaaaaattctttaaactt
tgaaaaacaacACAATATGGATGCGTCATTGAAACGAAGAAGCCCCTCAT
TGGACGAAGTTCAACCTAAAAGATCACGGTCAAACGTAGACGAACGTGAA
TTAACACAATCATGCGTGGCTGGATCACGTAAAAGTCCCGTAagtataaa
ttttattttgtaaaaaagccTACCAGCTAGAGCTCTCTATATTTCGATCT
CCAAGGGGCTACGAATTTTCTTTGAGCTAGAGGATTAATTGGGGCATTTG
TTCGATTTTCCAGTCAAGTTGACCTTTTCTTCAAGCCCAAATGCAGAAAG
ATTTCAAGGCTTGGAGACACGATAACTTTTTTCACGTTGgtacaatgcaa
catgctccatcccaacaacctgaaacgctttctcgttagtccaaaaaaag
aaaccaccggacacgcacttttttcttgAGTTGGTTGGATGGAGCaggtt
gcattgcaccaacgcgaaaaaaacttctcatgCCCCCATAATCTTTAAGA
GGTTTTTTTAGGGAGGGAGTTGGCTGTATTCTTAAAGTTGACgaggtttt
tgtttttaaggGAAAAGTTTCCTTTGTAAACGTTTAAGATAAGAACGACC
TCATTAAGAAACGATTTCAAACAAATTACAACCTCTGTCCAATTATGAAT
TCCATTTTTGAGATGCAGGCTACTATATGCTTTTAAATCTTCGAGGCATA
CATGAGCTTATTCAATCTATTTTCAATCTCAGCGAACAATAGCCGTCATA
TTAACACCAATAAATTTTTGATCCTTTAATTTAATTATCAAACGCTCAGA
TCTATTGAATATGGATTTTTTGTCATCGATTTGTAACTAACCTTTTGTTA
TCAATTTGTATCCTTTCGTTCCAAAGTCAAGAGCGACTTCTGTTCTGGTG
ATTAGTTGTCGATTTCCTGAATGAATTTCCTTTATAATTAGTCAACAGTA
TTGATTGCCGAAAAAGGAACTCTTTTTTTAATTAgcaattttctgtaaaa
attgTACGTTTTCTCATCCCAAAAAGATTACCTTCACTATTAGCTGccat
ttgaaatgtttttcatgTAAATCATAAATGAAGACGAGCTTGTCCGTGTT
TTAAATcccttttaaattttcattttatattctCTAGTTGGCTGTTACAC
AAACCAATACTATTGTAGCGGCTTTGAAGAAAATACACCCTGACTATGAT
TTCCCAATTGGTAAGCTTTCtgctttcttgattttcttgtgTCATTGTGT
TACCAACTATTCTATCTTTTGAGAGAAACAGTAgactcgcttattcgaac
ttctattattcgaatacAATAATTCGAATAcaataattcgaactaattct
ctGCTACAACGTCAAGGGGGGGGGGACCCATCGTAAAATATtatctataa
ttcgaatctctctgtaattcgaacaaataagattccccgttgGAATTCGA
ATTGGCCTGAGTTTACTGTATATCATATTTTCCATCATGACTGCTCAATA
TAATGCATACCGCCTACATGACCAGAACAGGATAATTTTTGTCTACATCG
AAACCAAAACCGATGTCTGCGTGGTCGAAAGCAGTGAATTATTAGTCTCT
GCATATTAAAATTATCTTGTAACTATCTATTTTCGTTCCTCTATTACCTT
ATCAATCAACCTCCTAACTCTTAATATTCGTTTTATAATTAAATCATAGT
TTCGTCTGTACTAATACCACATGTCCTTCCCTTAAACGTGTTCCGTTTGG
CTTCCGCATCGACGCTCTTAATTGCTTTGTTTTTTCTATTCATCTACTAT
TTTTCTTACAAGAACCATTATTTATTTCTTTAGAAACAATGCAAACACTT
GGCGATAGAATTTTACATTTGGCATTACCAAAGGTTAGCCAGTTATCTTT
TGTGTTTCTTTACCATTCAATGTAACCCTGGATTTTACTCAGGCCACATC
ATTCCCCAgaaaaaaagcattaaaatctcCCTGGCACCTTAGCAACGATT
ACGTATAAAAAAATGAGGTGCTTTATAAAGTATCATGTGCTAGCAAGCCT
ACTGCTGTTTTTTCGTAGTCACGAAATGACCTGGATTTGTATGACACCAA
TGTgccacagacccactggaaaaattggcaaaaatttcgtcttcAGTGGG
AAAAAACCCtgtaatttcagccccactgggaaattgactttgattccgTC
CCcatttcgaaattcaatgtttaaaaattgcactctaataACCATCCCca
cttttatccccactgaggaaaaaagttccaccggggctgtgagacagggg
tgtcgtATGGAAATTTCTAATGGACCTCGGTTCCTTTTATTTTTACGTAG
ATTGGTCAAAAAGGACTTTTCACAAAAGACTTGGAAAACGCCTTGAACGA
AAAACGTGTAGATTTCTTGGTGCACTCTCTAAAAGATTTGCCAACTAAAA
TGCCTGAAGGAATGGCCCTCGGATGTGTCTTCAAGTAAGTGTTATTCTGA
AATGCACAATTTCAAATATTATTGCAAAAATATGTACACTGAGACAATGT
CACATTAGTTGCGTGGAGTTAAGTGAAATATCTGTCACTTTTGCCACAGG
CTTTTCATCTTGGCACCAAGAATGGATTCGACCAGGCGATGTCAACTGAA
CTTTCATTGAACTAATCAAACGATAACTGTTTAAACAGTATAATAGTTTA
AAATTAAGTGACAATTTAGTTTTCTCTGTTACAAAATAGAGTTTTTAATT
CTCGAGTCAtcctttaaaaatttttctgctatatatttttctttagaCGC
GATAACCCTTTTGATTGCGTTATATTCCACTCCAAACATGTTGGAAAGAA
ATTGGAAGACTTGGCGCCAAACAGGTAAGAAGGAAGGAAATCTTATGAGG
CTGATTTGACAAGGCCATTCGTTCAAAGTTATAGTAGGCACTCCCAAAGA
TAAACAATCTCAATTCGCTGGCACCTTTTTAATTCCGATGGTGTCTGCTA
ATGGAAATCTATGCATTGTACAATCTTTTAGGATTCTGATAGTCTTGTTA
CAATACAGCACGCtagaaaaaaattctgaaaatataaaGGAAACTTTGTG
ACACTTTTTGCTCTAGGATATAGTCCAACAATCTTATTCCTCTTTCAGTC
TCATCAGAAGAGCAGAGATTACTTCTATAGTTCGAATATTTCTGTAACTC
GACAAAATTGAGAGTTCCTAGTAATCGAATCAGCGAGAGTTAACAGTAAA
ACTTAGTCTTACAATCTTATTCCTCTTTCATCAGCGTCATCGGAACAAGT
TCATTGCGTCGTGTGGCACAACTAAAGCGAAAATACCCAACTCTCATTTT
CCAAAGTGTCAGAGGGAACTTGAACACTCGGTTACGAAAACTCGAGGAAG
ATGGAGTTTATGATGCTATCATTCTTGCCAAAGCTGGCATTGACCGTATG
AATTGGACAGAGAAAATTGGGCAGATCCTGGAAGAGGAAATTGCTTATGC
TGTAGGACAGGTATCatcttatgttttttttcagttttggttTGATCCTG
ATCCCTTTCGTTCCAATTTTTTGTCTGTTTGTCTGTAGTTTAGTCAGATA
TTCTGGAATATTCATTCACTCGCACAAACAccttttaaaaaacttaaaat
attgATAACACGTAATATGCGATACACACGGAAGCTTTCTCGCGGACAAG
GATGAATTAATTCAATTCACATAATAAAATGTGTATAGGTTAATCACCCC
CTGCACATGCACATAACCTTCAAAGAATCGTCCCGTAGCATCCaagtttt
tttcctgatttctgCACAAATCCCCAAAGATTTCCAAGGTCAATCTAAAG
ACTTCAAAAGTTCAAGAGTCAAGCCAAGACCTAAATCAGCAGAGATTATC
AAAAGTGTTTATCAAAAGACTACATGAAAGGATTTcgaagattttctttt
attcaaaagaTTTCCAAGTAAGATCTGTTTAGTTCTAAATATCAGTTTTA
AAGTTCTACTATATCTTGATACATTTTGATACAGTTCAAGTCTCCATTAC
TCGAACCCGCACGTGgaatacaaatttgttcgagttatcgAGTAAGGTCT
GAAAAGACATTATTAACCGAAGGGACGagcagggtcggatacaggaggta
ggctatcttattcatggagagtataATTAGTTTCCattataaggtaatac
gataataaagtgcactctcctccattggttaaagcatccctctgtatccg
agcctggacgagaaaacttgttctaGTTaatgagatatttgagttataga
agttcgagttagagactctactgtattaaGAAATCGGAACTTTTGTCGAA
TACTTACTCAAAACTAACAATTTCTAATATTCGACCATTTTCTTCTCAGG
GAGCAATGGCTGTTGAGATTCGAGACGATGATCAATTTATGATGAAAGTT
CTCAGTAAGATTACAGATATGAAGACGATGTTGACGGTGATAGCTGAACG
TGCGTTCATGAGGAAGTTGGATGGTGGTTGCAGTACACCAGTCGGTTGTA
ATGTTACTTACGAAGATGGAATGGTAAGCTTTTGCACTCCTTTCTGATTT
TACATTCTCACGTGCAGATATCTTGCATTTACATTTTTTGATATTAAAAC
AGTTACCTGTATGCGAGTGGCCACTCAGACAACTCCTTGTTTATCCTAAG
TCTATGAATTATGCCCTATCATAGGATGATACAAATTCTTCAATGCGCAT
AATCTGGGCTCTTCTAACAAAACTCTAATAagtgttcttttgtttttcca
cAGCTTCATCTTCGAGGAGTATGTTTAAGCGTTGATGGAAAAGATTGCGT
CGAAGATCGTATGAGCGCCCCGATCAACTTCGATCTTCCACGACCGGAAG
GAGAAAAAGAGAAAACGTTTTTCGTCTCAGACGTTGGTGTAGTAGTAGAT
ACTCTTTATAAAAACGAATACGAAAAAGCGACGAAACTCGGCGACGACGT
AGCCACAAAACTTATCGAACTCGGCGCTGATGAGATTTTAAAGACTGTTA
AACTGGCTATCCCAAACGTAGCCAATATACAACTCCCTGTAGCGAATAGT
GGAACTATGAAATTTGTTTGAAAGCAGCAGTGACGTTGATGTGATAATTG
TatattgtttttctttgaattgaGAGTATAGAgtgaaattgtatattttt
tcaaatttggaatGGTCTATTTTGGATATTATTCATTGGATTGGTCGAAA
AACCTGtatttaaagaaaatatcagCTGGACTGAAAACACGATGATTTTT
TAAgggtaaaaaatgtttttaagaacAAATGAAACGTGGTTAATTTGAGT
TATTTTTATCGAAAAACAATTAATGAATTCGTGAATTGATGTTACCACGG
GAAAGCGTCTTAACTCGTTTAAATTATTGAGCGCTTAAAGTGTCTCGCTC
TATGTACCTTAACCATTTAAAATCGTTGCTCAAAGGGatatttttttacc
aaattatgaaaacaaaaaatgtaaatgtttttatttggtaCAACAAACCT
GAAAAGATCTTATTATTTTGTAATGTGGA

Coding sequence (CDS) from alignment at sc0000053:732116..738544+

>TCONS_00005439 ID=TCONS_00005439|Name=TCONS_00005439|organism=Clytia hemisphaerica|type=CDS|length=12015bp|location=Sequence derived from alignment at sc0000053:732116..738544+ (Clytia hemisphaerica)
AAAAAGTACGACTTGATTATGGATATCAGAGGGGAaacacaaaaatacaa
aaaaaacaaaaaactcaaagtcaaaaactcaaaatttcacGTCGAAAATA
CTCCGTATAATTATCCTCTCTTcactaaaaattctttaaactttgaaaaa
caacACAATATGGATGCGTCATTGAAACGAAGAAGCCCCTCATTGGACGA
AGTTCAACCTAAAAGATCACGGTCAAACGTAGACGAACGTGAATTAACAC
AATCATGCGTGGCTGGATCACGTAAAAGTCCCTTGGCTGTTACACAAACC
AATACTATTGTAGCGGCTTTGAAGAAAATACACCCTGACTATGATTTCCC
AATTGAAACAATGCAAACACTTGGCGATAGAATTTTACATTTGGCATTAC
CAAAGATTGGTCAAAAAGGACTTTTCACAAAAGACTTGGAAAACGCCTTG
AACGAAAAACGTGTAGATTTCTTGGTGCACTCTCTAAAAGATTTGCCAAC
TAAAATGCCTGAAGGAATGGCCCTCGGATGTGTCTTCAAaCGCGATAACC
CTTTTGATTGCGTTATATTCCACTCCAAACATGTTGGAAAGAAATTGGAA
GACTTGGCGCCAAACAGCGTCATCGGAACAAGTTCATTGCGTCGTGTGGC
ACAACTAAAGCGAAAATACCCAACTCTCATTTTCCAAAGTGTCAGAGGGA
ACTTGAACACTCGGTTACGAAAACTCGAGGAAGATGGAGTTTATGATGCT
ATCATTCTTGCCAAAGCTGGCATTGACCGTATGAATTGGACAGAGAAAAT
TGGGCAGATCCTGGAAGAGGAAATTGCTTATGCTGTAGGACAGGGAGCAA
TGGCTGTTGAGATTCGAGACGATGATCAATTTATGATGAAAGTTCTCAGT
AAGATTACAGATATGAAGACGATGTTGACGGTGATAGCTGAACGTGCGTT
CATGAGGAAGTTGGATGGTGGTTGCAGTACACCAGTCGGTTGTAATGTTA
CTTACGAAGATGGAATGCTTCATCTTCGAGGAGTATGTTTAAGCGTTGAT
GGAAAAGATTGCGTCGAAGATCGTATGAGCGCCCCGATCAACTTCGATCT
TCCACGACCGGAAGGAGAAAAAGAGAAAACGTTTTTCGTCTCAGACGTTG
GTGTAGTAGTAGATACTCTTTATAAAAACGAATACGAAAAAGCGACGAAA
CTCGGCGACGACGTAGCCACAAAACTTATCGAACTCGGCGCTGATGAGAT
TTTAAAGACTGTTAAACTGGCTATCCCAAACGTAGCCAATATACAACTCC
CTGTAGCGAATAGTGGAACTATGAAATTTGTTTGAAAAAAGTACGACTTG
ATTATGGATATCAGAGGGGAaacacaaaaatacaaaaaaaacaaaaaact
caaagtcaaaaactcaaaatttcacGTCGAAAATACTCCGTATAATTATC
CTCTCTTcactaaaaattctttaaactttgaaaaacaacACAATATGGAT
GCGTCATTGAAACGAAGAAGCCCCTCATTGGACGAAGTTCAACCTAAAAG
ATCACGGTCAAACGTAGACGAACGTGAATTAACACAATCATGCGTGGCTG
GATCACGTAAAAGTCCCTTGGCTGTTACACAAACCAATACTATTGTAGCG
GCTTTGAAGAAAATACACCCTGACTATGATTTCCCAATTGAAACAATGCA
AACACTTGGCGATAGAATTTTACATTTGGCATTACCAAAGATTGGTCAAA
AAGGACTTTTCACAAAAGACTTGGAAAACGCCTTGAACGAAAAACGTGTA
GATTTCTTGGTGCACTCTCTAAAAGATTTGCCAACTAAAATGCCTGAAGG
AATGGCCCTCGGATGTGTCTTCAAaCGCGATAACCCTTTTGATTGCGTTA
TATTCCACTCCAAACATGTTGGAAAGAAATTGGAAGACTTGGCGCCAAAC
AGCGTCATCGGAACAAGTTCATTGCGTCGTGTGGCACAACTAAAGCGAAA
ATACCCAACTCTCATTTTCCAAAGTGTCAGAGGGAACTTGAACACTCGGT
TACGAAAACTCGAGGAAGATGGAGTTTATGATGCTATCATTCTTGCCAAA
GCTGGCATTGACCGTATGAATTGGACAGAGAAAATTGGGCAGATCCTGGA
AGAGGAAATTGCTTATGCTGTAGGACAGGGAGCAATGGCTGTTGAGATTC
GAGACGATGATCAATTTATGATGAAAGTTCTCAGTAAGATTACAGATATG
AAGACGATGTTGACGGTGATAGCTGAACGTGCGTTCATGAGGAAGTTGGA
TGGTGGTTGCAGTACACCAGTCGGTTGTAATGTTACTTACGAAGATGGAA
TGCTTCATCTTCGAGGAGTATGTTTAAGCGTTGATGGAAAAGATTGCGTC
GAAGATCGTATGAGCGCCCCGATCAACTTCGATCTTCCACGACCGGAAGG
AGAAAAAGAGAAAACGTTTTTCGTCTCAGACGTTGGTGTAGTAGTAGATA
CTCTTTATAAAAACGAATACGAAAAAGCGACGAAACTCGGCGACGACGTA
GCCACAAAACTTATCGAACTCGGCGCTGATGAGATTTTAAAGACTGTTAA
ACTGGCTATCCCAAACGTAGCCAATATACAACTCCCTGTAGCGAATAGTG
GAACTATGAAATTTGTTTGAAAAAAGTACGACTTGATTATGGATATCAGA
GGGGAaacacaaaaatacaaaaaaaacaaaaaactcaaagtcaaaaactc
aaaatttcacGTCGAAAATACTCCGTATAATTATCCTCTCTTcactaaaa
attctttaaactttgaaaaacaacACAATATGGATGCGTCATTGAAACGA
AGAAGCCCCTCATTGGACGAAGTTCAACCTAAAAGATCACGGTCAAACGT
AGACGAACGTGAATTAACACAATCATGCGTGGCTGGATCACGTAAAAGTC
CCTTGGCTGTTACACAAACCAATACTATTGTAGCGGCTTTGAAGAAAATA
CACCCTGACTATGATTTCCCAATTGAAACAATGCAAACACTTGGCGATAG
AATTTTACATTTGGCATTACCAAAGATTGGTCAAAAAGGACTTTTCACAA
AAGACTTGGAAAACGCCTTGAACGAAAAACGTGTAGATTTCTTGGTGCAC
TCTCTAAAAGATTTGCCAACTAAAATGCCTGAAGGAATGGCCCTCGGATG
TGTCTTCAAaCGCGATAACCCTTTTGATTGCGTTATATTCCACTCCAAAC
ATGTTGGAAAGAAATTGGAAGACTTGGCGCCAAACAGCGTCATCGGAACA
AGTTCATTGCGTCGTGTGGCACAACTAAAGCGAAAATACCCAACTCTCAT
TTTCCAAAGTGTCAGAGGGAACTTGAACACTCGGTTACGAAAACTCGAGG
AAGATGGAGTTTATGATGCTATCATTCTTGCCAAAGCTGGCATTGACCGT
ATGAATTGGACAGAGAAAATTGGGCAGATCCTGGAAGAGGAAATTGCTTA
TGCTGTAGGACAGGGAGCAATGGCTGTTGAGATTCGAGACGATGATCAAT
TTATGATGAAAGTTCTCAGTAAGATTACAGATATGAAGACGATGTTGACG
GTGATAGCTGAACGTGCGTTCATGAGGAAGTTGGATGGTGGTTGCAGTAC
ACCAGTCGGTTGTAATGTTACTTACGAAGATGGAATGCTTCATCTTCGAG
GAGTATGTTTAAGCGTTGATGGAAAAGATTGCGTCGAAGATCGTATGAGC
GCCCCGATCAACTTCGATCTTCCACGACCGGAAGGAGAAAAAGAGAAAAC
GTTTTTCGTCTCAGACGTTGGTGTAGTAGTAGATACTCTTTATAAAAACG
AATACGAAAAAGCGACGAAACTCGGCGACGACGTAGCCACAAAACTTATC
GAACTCGGCGCTGATGAGATTTTAAAGACTGTTAAACTGGCTATCCCAAA
CGTAGCCAATATACAACTCCCTGTAGCGAATAGTGGAACTATGAAATTTG
TTTGAAAAAAGTACGACTTGATTATGGATATCAGAGGGGAaacacaaaaa
tacaaaaaaaacaaaaaactcaaagtcaaaaactcaaaatttcacGTCGA
AAATACTCCGTATAATTATCCTCTCTTcactaaaaattctttaaactttg
aaaaacaacACAATATGGATGCGTCATTGAAACGAAGAAGCCCCTCATTG
GACGAAGTTCAACCTAAAAGATCACGGTCAAACGTAGACGAACGTGAATT
AACACAATCATGCGTGGCTGGATCACGTAAAAGTCCCTTGGCTGTTACAC
AAACCAATACTATTGTAGCGGCTTTGAAGAAAATACACCCTGACTATGAT
TTCCCAATTGAAACAATGCAAACACTTGGCGATAGAATTTTACATTTGGC
ATTACCAAAGATTGGTCAAAAAGGACTTTTCACAAAAGACTTGGAAAACG
CCTTGAACGAAAAACGTGTAGATTTCTTGGTGCACTCTCTAAAAGATTTG
CCAACTAAAATGCCTGAAGGAATGGCCCTCGGATGTGTCTTCAAaCGCGA
TAACCCTTTTGATTGCGTTATATTCCACTCCAAACATGTTGGAAAGAAAT
TGGAAGACTTGGCGCCAAACAGCGTCATCGGAACAAGTTCATTGCGTCGT
GTGGCACAACTAAAGCGAAAATACCCAACTCTCATTTTCCAAAGTGTCAG
AGGGAACTTGAACACTCGGTTACGAAAACTCGAGGAAGATGGAGTTTATG
ATGCTATCATTCTTGCCAAAGCTGGCATTGACCGTATGAATTGGACAGAG
AAAATTGGGCAGATCCTGGAAGAGGAAATTGCTTATGCTGTAGGACAGGG
AGCAATGGCTGTTGAGATTCGAGACGATGATCAATTTATGATGAAAGTTC
TCAGTAAGATTACAGATATGAAGACGATGTTGACGGTGATAGCTGAACGT
GCGTTCATGAGGAAGTTGGATGGTGGTTGCAGTACACCAGTCGGTTGTAA
TGTTACTTACGAAGATGGAATGCTTCATCTTCGAGGAGTATGTTTAAGCG
TTGATGGAAAAGATTGCGTCGAAGATCGTATGAGCGCCCCGATCAACTTC
GATCTTCCACGACCGGAAGGAGAAAAAGAGAAAACGTTTTTCGTCTCAGA
CGTTGGTGTAGTAGTAGATACTCTTTATAAAAACGAATACGAAAAAGCGA
CGAAACTCGGCGACGACGTAGCCACAAAACTTATCGAACTCGGCGCTGAT
GAGATTTTAAAGACTGTTAAACTGGCTATCCCAAACGTAGCCAATATACA
ACTCCCTGTAGCGAATAGTGGAACTATGAAATTTGTTTGAAAAAAGTACG
ACTTGATTATGGATATCAGAGGGGAaacacaaaaatacaaaaaaaacaaa
aaactcaaagtcaaaaactcaaaatttcacGTCGAAAATACTCCGTATAA
TTATCCTCTCTTcactaaaaattctttaaactttgaaaaacaacACAATA
TGGATGCGTCATTGAAACGAAGAAGCCCCTCATTGGACGAAGTTCAACCT
AAAAGATCACGGTCAAACGTAGACGAACGTGAATTAACACAATCATGCGT
GGCTGGATCACGTAAAAGTCCCTTGGCTGTTACACAAACCAATACTATTG
TAGCGGCTTTGAAGAAAATACACCCTGACTATGATTTCCCAATTGAAACA
ATGCAAACACTTGGCGATAGAATTTTACATTTGGCATTACCAAAGATTGG
TCAAAAAGGACTTTTCACAAAAGACTTGGAAAACGCCTTGAACGAAAAAC
GTGTAGATTTCTTGGTGCACTCTCTAAAAGATTTGCCAACTAAAATGCCT
GAAGGAATGGCCCTCGGATGTGTCTTCAAaCGCGATAACCCTTTTGATTG
CGTTATATTCCACTCCAAACATGTTGGAAAGAAATTGGAAGACTTGGCGC
CAAACAGCGTCATCGGAACAAGTTCATTGCGTCGTGTGGCACAACTAAAG
CGAAAATACCCAACTCTCATTTTCCAAAGTGTCAGAGGGAACTTGAACAC
TCGGTTACGAAAACTCGAGGAAGATGGAGTTTATGATGCTATCATTCTTG
CCAAAGCTGGCATTGACCGTATGAATTGGACAGAGAAAATTGGGCAGATC
CTGGAAGAGGAAATTGCTTATGCTGTAGGACAGGGAGCAATGGCTGTTGA
GATTCGAGACGATGATCAATTTATGATGAAAGTTCTCAGTAAGATTACAG
ATATGAAGACGATGTTGACGGTGATAGCTGAACGTGCGTTCATGAGGAAG
TTGGATGGTGGTTGCAGTACACCAGTCGGTTGTAATGTTACTTACGAAGA
TGGAATGCTTCATCTTCGAGGAGTATGTTTAAGCGTTGATGGAAAAGATT
GCGTCGAAGATCGTATGAGCGCCCCGATCAACTTCGATCTTCCACGACCG
GAAGGAGAAAAAGAGAAAACGTTTTTCGTCTCAGACGTTGGTGTAGTAGT
AGATACTCTTTATAAAAACGAATACGAAAAAGCGACGAAACTCGGCGACG
ACGTAGCCACAAAACTTATCGAACTCGGCGCTGATGAGATTTTAAAGACT
GTTAAACTGGCTATCCCAAACGTAGCCAATATACAACTCCCTGTAGCGAA
TAGTGGAACTATGAAATTTGTTTGAAAAAAGTACGACTTGATTATGGATA
TCAGAGGGGAaacacaaaaatacaaaaaaaacaaaaaactcaaagtcaaa
aactcaaaatttcacGTCGAAAATACTCCGTATAATTATCCTCTCTTcac
taaaaattctttaaactttgaaaaacaacACAATATGGATGCGTCATTGA
AACGAAGAAGCCCCTCATTGGACGAAGTTCAACCTAAAAGATCACGGTCA
AACGTAGACGAACGTGAATTAACACAATCATGCGTGGCTGGATCACGTAA
AAGTCCCTTGGCTGTTACACAAACCAATACTATTGTAGCGGCTTTGAAGA
AAATACACCCTGACTATGATTTCCCAATTGAAACAATGCAAACACTTGGC
GATAGAATTTTACATTTGGCATTACCAAAGATTGGTCAAAAAGGACTTTT
CACAAAAGACTTGGAAAACGCCTTGAACGAAAAACGTGTAGATTTCTTGG
TGCACTCTCTAAAAGATTTGCCAACTAAAATGCCTGAAGGAATGGCCCTC
GGATGTGTCTTCAAaCGCGATAACCCTTTTGATTGCGTTATATTCCACTC
CAAACATGTTGGAAAGAAATTGGAAGACTTGGCGCCAAACAGCGTCATCG
GAACAAGTTCATTGCGTCGTGTGGCACAACTAAAGCGAAAATACCCAACT
CTCATTTTCCAAAGTGTCAGAGGGAACTTGAACACTCGGTTACGAAAACT
CGAGGAAGATGGAGTTTATGATGCTATCATTCTTGCCAAAGCTGGCATTG
ACCGTATGAATTGGACAGAGAAAATTGGGCAGATCCTGGAAGAGGAAATT
GCTTATGCTGTAGGACAGGGAGCAATGGCTGTTGAGATTCGAGACGATGA
TCAATTTATGATGAAAGTTCTCAGTAAGATTACAGATATGAAGACGATGT
TGACGGTGATAGCTGAACGTGCGTTCATGAGGAAGTTGGATGGTGGTTGC
AGTACACCAGTCGGTTGTAATGTTACTTACGAAGATGGAATGCTTCATCT
TCGAGGAGTATGTTTAAGCGTTGATGGAAAAGATTGCGTCGAAGATCGTA
TGAGCGCCCCGATCAACTTCGATCTTCCACGACCGGAAGGAGAAAAAGAG
AAAACGTTTTTCGTCTCAGACGTTGGTGTAGTAGTAGATACTCTTTATAA
AAACGAATACGAAAAAGCGACGAAACTCGGCGACGACGTAGCCACAAAAC
TTATCGAACTCGGCGCTGATGAGATTTTAAAGACTGTTAAACTGGCTATC
CCAAACGTAGCCAATATACAACTCCCTGTAGCGAATAGTGGAACTATGAA
ATTTGTTTGAAAAAAGTACGACTTGATTATGGATATCAGAGGGGAaacac
aaaaatacaaaaaaaacaaaaaactcaaagtcaaaaactcaaaatttcac
GTCGAAAATACTCCGTATAATTATCCTCTCTTcactaaaaattctttaaa
ctttgaaaaacaacACAATATGGATGCGTCATTGAAACGAAGAAGCCCCT
CATTGGACGAAGTTCAACCTAAAAGATCACGGTCAAACGTAGACGAACGT
GAATTAACACAATCATGCGTGGCTGGATCACGTAAAAGTCCCTTGGCTGT
TACACAAACCAATACTATTGTAGCGGCTTTGAAGAAAATACACCCTGACT
ATGATTTCCCAATTGAAACAATGCAAACACTTGGCGATAGAATTTTACAT
TTGGCATTACCAAAGATTGGTCAAAAAGGACTTTTCACAAAAGACTTGGA
AAACGCCTTGAACGAAAAACGTGTAGATTTCTTGGTGCACTCTCTAAAAG
ATTTGCCAACTAAAATGCCTGAAGGAATGGCCCTCGGATGTGTCTTCAAa
CGCGATAACCCTTTTGATTGCGTTATATTCCACTCCAAACATGTTGGAAA
GAAATTGGAAGACTTGGCGCCAAACAGCGTCATCGGAACAAGTTCATTGC
GTCGTGTGGCACAACTAAAGCGAAAATACCCAACTCTCATTTTCCAAAGT
GTCAGAGGGAACTTGAACACTCGGTTACGAAAACTCGAGGAAGATGGAGT
TTATGATGCTATCATTCTTGCCAAAGCTGGCATTGACCGTATGAATTGGA
CAGAGAAAATTGGGCAGATCCTGGAAGAGGAAATTGCTTATGCTGTAGGA
CAGGGAGCAATGGCTGTTGAGATTCGAGACGATGATCAATTTATGATGAA
AGTTCTCAGTAAGATTACAGATATGAAGACGATGTTGACGGTGATAGCTG
AACGTGCGTTCATGAGGAAGTTGGATGGTGGTTGCAGTACACCAGTCGGT
TGTAATGTTACTTACGAAGATGGAATGCTTCATCTTCGAGGAGTATGTTT
AAGCGTTGATGGAAAAGATTGCGTCGAAGATCGTATGAGCGCCCCGATCA
ACTTCGATCTTCCACGACCGGAAGGAGAAAAAGAGAAAACGTTTTTCGTC
TCAGACGTTGGTGTAGTAGTAGATACTCTTTATAAAAACGAATACGAAAA
AGCGACGAAACTCGGCGACGACGTAGCCACAAAACTTATCGAACTCGGCG
CTGATGAGATTTTAAAGACTGTTAAACTGGCTATCCCAAACGTAGCCAAT
ATACAACTCCCTGTAGCGAATAGTGGAACTATGAAATTTGTTTGAAAAAA
GTACGACTTGATTATGGATATCAGAGGGGAaacacaaaaatacaaaaaaa
acaaaaaactcaaagtcaaaaactcaaaatttcacGTCGAAAATACTCCG
TATAATTATCCTCTCTTcactaaaaattctttaaactttgaaaaacaacA
CAATATGGATGCGTCATTGAAACGAAGAAGCCCCTCATTGGACGAAGTTC
AACCTAAAAGATCACGGTCAAACGTAGACGAACGTGAATTAACACAATCA
TGCGTGGCTGGATCACGTAAAAGTCCCTTGGCTGTTACACAAACCAATAC
TATTGTAGCGGCTTTGAAGAAAATACACCCTGACTATGATTTCCCAATTG
AAACAATGCAAACACTTGGCGATAGAATTTTACATTTGGCATTACCAAAG
ATTGGTCAAAAAGGACTTTTCACAAAAGACTTGGAAAACGCCTTGAACGA
AAAACGTGTAGATTTCTTGGTGCACTCTCTAAAAGATTTGCCAACTAAAA
TGCCTGAAGGAATGGCCCTCGGATGTGTCTTCAAaCGCGATAACCCTTTT
GATTGCGTTATATTCCACTCCAAACATGTTGGAAAGAAATTGGAAGACTT
GGCGCCAAACAGCGTCATCGGAACAAGTTCATTGCGTCGTGTGGCACAAC
TAAAGCGAAAATACCCAACTCTCATTTTCCAAAGTGTCAGAGGGAACTTG
AACACTCGGTTACGAAAACTCGAGGAAGATGGAGTTTATGATGCTATCAT
TCTTGCCAAAGCTGGCATTGACCGTATGAATTGGACAGAGAAAATTGGGC
AGATCCTGGAAGAGGAAATTGCTTATGCTGTAGGACAGGGAGCAATGGCT
GTTGAGATTCGAGACGATGATCAATTTATGATGAAAGTTCTCAGTAAGAT
TACAGATATGAAGACGATGTTGACGGTGATAGCTGAACGTGCGTTCATGA
GGAAGTTGGATGGTGGTTGCAGTACACCAGTCGGTTGTAATGTTACTTAC
GAAGATGGAATGCTTCATCTTCGAGGAGTATGTTTAAGCGTTGATGGAAA
AGATTGCGTCGAAGATCGTATGAGCGCCCCGATCAACTTCGATCTTCCAC
GACCGGAAGGAGAAAAAGAGAAAACGTTTTTCGTCTCAGACGTTGGTGTA
GTAGTAGATACTCTTTATAAAAACGAATACGAAAAAGCGACGAAACTCGG
CGACGACGTAGCCACAAAACTTATCGAACTCGGCGCTGATGAGATTTTAA
AGACTGTTAAACTGGCTATCCCAAACGTAGCCAATATACAACTCCCTGTA
GCGAATAGTGGAACTATGAAATTTGTTTGAAAAAAGTACGACTTGATTAT
GGATATCAGAGGGGAaacacaaaaatacaaaaaaaacaaaaaactcaaag
tcaaaaactcaaaatttcacGTCGAAAATACTCCGTATAATTATCCTCTC
TTcactaaaaattctttaaactttgaaaaacaacACAATATGGATGCGTC
ATTGAAACGAAGAAGCCCCTCATTGGACGAAGTTCAACCTAAAAGATCAC
GGTCAAACGTAGACGAACGTGAATTAACACAATCATGCGTGGCTGGATCA
CGTAAAAGTCCCTTGGCTGTTACACAAACCAATACTATTGTAGCGGCTTT
GAAGAAAATACACCCTGACTATGATTTCCCAATTGAAACAATGCAAACAC
TTGGCGATAGAATTTTACATTTGGCATTACCAAAGATTGGTCAAAAAGGA
CTTTTCACAAAAGACTTGGAAAACGCCTTGAACGAAAAACGTGTAGATTT
CTTGGTGCACTCTCTAAAAGATTTGCCAACTAAAATGCCTGAAGGAATGG
CCCTCGGATGTGTCTTCAAaCGCGATAACCCTTTTGATTGCGTTATATTC
CACTCCAAACATGTTGGAAAGAAATTGGAAGACTTGGCGCCAAACAGCGT
CATCGGAACAAGTTCATTGCGTCGTGTGGCACAACTAAAGCGAAAATACC
CAACTCTCATTTTCCAAAGTGTCAGAGGGAACTTGAACACTCGGTTACGA
AAACTCGAGGAAGATGGAGTTTATGATGCTATCATTCTTGCCAAAGCTGG
CATTGACCGTATGAATTGGACAGAGAAAATTGGGCAGATCCTGGAAGAGG
AAATTGCTTATGCTGTAGGACAGGGAGCAATGGCTGTTGAGATTCGAGAC
GATGATCAATTTATGATGAAAGTTCTCAGTAAGATTACAGATATGAAGAC
GATGTTGACGGTGATAGCTGAACGTGCGTTCATGAGGAAGTTGGATGGTG
GTTGCAGTACACCAGTCGGTTGTAATGTTACTTACGAAGATGGAATGCTT
CATCTTCGAGGAGTATGTTTAAGCGTTGATGGAAAAGATTGCGTCGAAGA
TCGTATGAGCGCCCCGATCAACTTCGATCTTCCACGACCGGAAGGAGAAA
AAGAGAAAACGTTTTTCGTCTCAGACGTTGGTGTAGTAGTAGATACTCTT
TATAAAAACGAATACGAAAAAGCGACGAAACTCGGCGACGACGTAGCCAC
AAAACTTATCGAACTCGGCGCTGATGAGATTTTAAAGACTGTTAAACTGG
CTATCCCAAACGTAGCCAATATACAACTCCCTGTAGCGAATAGTGGAACT
ATGAAATTTGTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003098XLOC_003098Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005439-exon-sc0000053-1491911889:732116..732148TCONS_00005439-exon-sc0000053-1491911889:732116..732148Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1510915933:732116..732148TCONS_00005439-exon-sc0000053-1510915933:732116..732148Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1575043694:732116..732148TCONS_00005439-exon-sc0000053-1575043694:732116..732148Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1491911889:732854..733104TCONS_00005439-exon-sc0000053-1491911889:732854..733104Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1510915933:732854..733104TCONS_00005439-exon-sc0000053-1510915933:732854..733104Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1575043694:732854..733104TCONS_00005439-exon-sc0000053-1575043694:732854..733104Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1491911889:734103..734175TCONS_00005439-exon-sc0000053-1491911889:734103..734175Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1510915933:734103..734175TCONS_00005439-exon-sc0000053-1510915933:734103..734175Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1575043694:734103..734175TCONS_00005439-exon-sc0000053-1575043694:734103..734175Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1491911889:734799..734848TCONS_00005439-exon-sc0000053-1491911889:734799..734848Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1510915933:734799..734848TCONS_00005439-exon-sc0000053-1510915933:734799..734848Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1575043694:734799..734848TCONS_00005439-exon-sc0000053-1575043694:734799..734848Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1491911889:735316..735449TCONS_00005439-exon-sc0000053-1491911889:735316..735449Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1510915933:735316..735449TCONS_00005439-exon-sc0000053-1510915933:735316..735449Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1575043694:735316..735449TCONS_00005439-exon-sc0000053-1575043694:735316..735449Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1491911889:735762..735839TCONS_00005439-exon-sc0000053-1491911889:735762..735839Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1510915933:735762..735839TCONS_00005439-exon-sc0000053-1510915933:735762..735839Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1575043694:735762..735839TCONS_00005439-exon-sc0000053-1575043694:735762..735839Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1491911889:736250..736475TCONS_00005439-exon-sc0000053-1491911889:736250..736475Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1510915933:736250..736475TCONS_00005439-exon-sc0000053-1510915933:736250..736475Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1575043694:736250..736475TCONS_00005439-exon-sc0000053-1575043694:736250..736475Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1491911889:737365..737538TCONS_00005439-exon-sc0000053-1491911889:737365..737538Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1510915933:737365..737538TCONS_00005439-exon-sc0000053-1510915933:737365..737538Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1575043694:737365..737538TCONS_00005439-exon-sc0000053-1575043694:737365..737538Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1491911889:737769..738544TCONS_00005439-exon-sc0000053-1491911889:737769..738544Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1510915933:737769..738544TCONS_00005439-exon-sc0000053-1510915933:737769..738544Clytia hemisphaericaexon
TCONS_00005439-exon-sc0000053-1575043694:737769..738544TCONS_00005439-exon-sc0000053-1575043694:737769..738544Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005439-proteinTCONS_00005439-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000053supercontigsc0000053:732116..738544 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
138.287	130.707	90.1413	92.5255	126.487	100.405	159.959	157.829	187.409	177.382	194.79	323.194	353.243	357.591	188.905	176.579	113.921	197.816	272.77	231.761	190.391	186.185	143.502	166.187	308.21	273.183	151.217	150.482	93.8506	91.268
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000860HemC
IPR022418Porphobilinogen_deaminase_C
IPR022417Porphobilin_deaminase_N
IPR022419Porphobilin_deaminase_cofac_BS
Vocabulary: Molecular Function
TermDefinition
GO:0004418hydroxymethylbilane synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0033014tetrapyrrole biosynthetic process
GO:0018160peptidyl-pyrromethane cofactor linkage
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0018160 peptidyl-pyrromethane cofactor linkage
biological_process GO:0033014 tetrapyrrole biosynthetic process
molecular_function GO:0004418 hydroxymethylbilane synthase activity
Blast
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BLAST of TCONS_00005439 vs. Swiss-Prot (Human)
Match: HEM3 (Porphobilinogen deaminase OS=Homo sapiens GN=HMBS PE=1 SV=2)

HSP 1 Score: 316.62 bits (810), Expect = 1.035e-101
Identity = 163/335 (48.66%), Postives = 217/335 (64.78%), Query Frame = 3 
Query:  267 GSRKSPLAVTQTNTIVAALKKIHPDYDFPIETMQTLGDRILHLALPKIGQKGLFTKDLENALNEKRVDFLVHSLKDLPTKMPEGMALGCVFKRDNPFDCVIFHSKHVGKKLEDLAPNSVIGTSSLRRVAQLKRKYPTLIFQSVRGNLNTRLRKLEEDGVYDAIILAKAGIDRMNWTEKIGQILE-EEIAYAVGQGAMAVEIRDDDQFMMKVLSKITDMKTMLTVIAERAFMRKLDGGCSTPVGCNVTYEDGMLHLRGVCLSVDGKDCVEDRMSAPINFDLPRPEGEKEKTFFVSDVGVVVDTLYKNEYEKATKLGDDVATKLIELGADEILKTVK 1268
            G+RKS LA  QT+++VA LK  +P   F I  M T GD+IL  AL KIG+K LFTK+LE+AL +  VD +VHSLKDLPT +P G  +G + KR+NP D V+FH K VGK LE L   SV+GTSSLRR AQL+RK+P L F+S+RGNLNTRLRKL+E   + AIILA AG+ RM W  ++GQIL  EE  YAVGQGA+ VE+R  DQ ++ ++  + D +T+L  IAERAF+R L+GGCS PV  +   +DG L+L G   S+DG D +++ M A I+      +G ++       VG+    + +     A  LG  +A  L+  GA  IL   +
Sbjct:   24 GTRKSQLARIQTDSVVATLKASYPGLQFEIIAMSTTGDKILDTALSKIGEKSLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQL---VGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDVAR 355
The following BLAST results are available for this feature:
BLAST of TCONS_00005439 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HEM31.035e-10148.66Porphobilinogen deaminase OS=Homo sapiens GN=HMBS ... [more]
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