TCONS_00005452 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005452
Unique NameTCONS_00005452
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3945

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005452 ID=TCONS_00005452|Name=TCONS_00005452|organism=Clytia hemisphaerica|type=transcript|length=3945bp
GCTATGCTGAATAATCGAGTCTCAAAGTGGGACTCGAAAAAGTATTATGG
AGGGAAGGTAAACACGGGGAGAAATGTGaaacaaagttttaatttttgct
tcgaTATCTTATCATTTCTTCAATCGATCGGTGCTGGCTTCCAAAGAAGA
AAATATTGGACTGTTTATCTGTTGTTTTGGTTATTGTTGGTTTTTCAGAA
ACAAGTTTTTGTTAACAGTTTGTTGTTATAGAAGAAGGAGAGTTGATGTC
GGTATATAATCTATTTTGACGAGGAATTTGttgagaaatattttgtttta
caaaattaaaatgTACAAATTGTTCCATGAATCACATTATTTATGGTCTA
TATATAATTGAGTACATGGCAGAAACAATTGATGGCTTCTGATCATAATT
TAATTGACTTTTCTGATGTTACAAACAACACCGACAAACAAGGCGAAAAA
ATTCAGCAATCTACAATGGGTGCCACACCAACACCTACCACTTCAAATAG
CAGTGTGGCACCTAAAACTATTTCTGATAATGTGAACATCAGTATTAATT
TGAATTCTGGGTCTGTTAACCCAGTTAAAACTTCCACAACTGGGACAACA
AATAAACCAAACAAAAGTCTGTTTGAAATCACAAGAGTTGAGAGCAACCA
TGACGAGAATAATGTTGGAGGAGAGGATTCAGAAATGGATGACTCTGTTT
CCAGCTCTACTTCTATATTAGACCAAATATCAAAGGACATTGAAAATGAA
AGGAAAGAATTAGCTGCTCcacaaaaaacaaaagtaacAGACAAAGATGA
TAACAATACTAATGTGGTTGTGACTCTGTCGAATACAAACCCTGCTAACA
GTTCCAATACACAGCCAGGAAACAATAACACCAGTGTTCCAAATTTACAA
CATCAAACCTCAGTAGTTACAACAACAAGTAGTACCTCTGCAACTCAACC
AGCAGAGCCCCAATCACGATTTAGGATTGTTAAAATTGCTAAGCCAAAAC
CATATGAAAAGGGGACTTGGATGGTAAATGACtttaatgagacacaaaaa
CAAGAGAAACAAGAGACTTCTACAGATACTGCTCCCTCTTCACCTGCTGT
GAAGCGAAATCGAAATCCATTATCAGACAGTGGAGGTGGTGTAACTTCTC
CCACAGAACCAATTAAAACAAAATCTTCTGAGTTTCTTGCacagaatttt
tcaaatgtacaaTCTCGAGGATCAAGTTACAATACAAATGGTGATAGGCG
GTCTTCAGTTGAAAGcacGACGGTCAGCGAATCGGGGTCAGGGACGCCCA
TAGTCACGCCAATGGTCAATGCATTGGAACTAGCTTTGgaacaaattcaa
aatatccgTGATTCCATGGTAACATCCGTTTCCGACGAAGtgaaaaaact
gaaagaaattATAGACAAAGTTCAAGCTGACAACACCAGGCTAAAAGAGG
AGAATGACTCactaaagaaaaaactttcagCGGCTGAAGATCGAATTGCT
TTGCTTGAGAAAGGGTAACTTTTTCTTACCGCCTGGCGCGCGCGGGATGT
GTGGTACGTCCTTGGATCACCGCCAAGCCCGTACGGTCACTGTTATTGCT
TGCTGATGATTCTGGAATGATATGACCTGCGACCGCAGGATAAGAATCTT
GCTTCTCGACTTTTTCCAAatcgaaatgaaattttaagtcTACGTAGACG
ATTATCAATGTATCTCATTCTCAAGAAATGATCTGATAATAGCGGCGCTT
CGTTATAGTTAGTTTTATACTTTGGCGGTGAACGTTGATTGAAtgcgaaa
atgtttttttggctGGTTTGGCACGTCATTTGATTCTGAATGGTTGATGA
AAGGCGGGGCATGGCTtgcaaattgaaaaagaaaacggaATTTACAAATT
TATGAAAAACGCTTTTAAGACgacaaaaaatatgttttatgacaaatgaa
attaaaatgatgtAGATTGGATtgtttttagaacttttttcttcttttaa
agtGAACAGGAACAGCTTTGTCACTCAATATTGCCCATGCTAACGAAATc
gaaagttttctttcaaatacgCTCTAGCTCTGTAAATTTTATCCTTATAA
TGCGAGAAACTTCTTCTTTGAGAGAAACGAGATGACTTTTGTTTTGGAGT
GGGGTTAGTTTCTCGAATTactgtattacttcgaataaacgcctcctttc
ttttaaacgccccctttcttttaaacgcccctccctAATGGATAAGTTTT
CAATAAACGCCCTCTCAAATAAACGCCTCCCCCCTGTATTCAACCCCATT
TTGACCAATTTCTTCATCTCTAAGATGACATAGTTAAactgaaagaaaac
gaaaaatcaaaacaaggtTGCCATTCACTTTATTAAAGTGACATTGGTTA
AAGATTGttcaataaacgcccctttATTTTAAACgctcccttcttttaaa
cgctcCCTCGAATTAACGCCCTTCTAAAATCTTAATGAACGCccagggcg
tttattcgaagtaatacttATACTACTGAAAGTTGTTACGGCTTACCACG
CAAATGCAGATCGCTGCGCTGAGTAGAGCTGATTGGGCATTCCATGCGCA
CATGACTTGCTTTTCTTTggcttttgtaaaaaataatcatCTTAACTTGT
ACGGAGATTTGAGGCTGTGCTGTTTAATTAATATCTAACAGCAGTAACTT
AAGTACAGTAGATTAACCAtccctgtatcacagacccgctggaaccccag
ccccactggactGGAAAGTTTGCCTAAAATTTCTTCCCCGGTTGGAAAAT
AATTTCGTCCCACTTGCCCTCTCAACCATCTTCTGGATTTTTTTGAGCCg
agaaaaatagaattttttgtGGGAAATAATTtccatcggggctgtgagac
aggggtgtgattaAGTTTTACTTCGAAGATAGCTGTAACCAAGCTATGGA
GTCGAGTAACAATTTCCCAATAGCTTATCACCctccaaaaattgtttttc
atttacgTGTGGAATGCCCAAGACGTCGAATTTCTTCTGACAATATAGAA
TGGAACCGTTAGGAAGGAAAATTTTGCCCAATTTTTAACGGAtcgttatt
gaatttttttttagaatcctCGAGAGTGAATGTTAAATATACCTCTATTA
TATATCATATAATAATTATACTCAAAAACTTCTTTGAGCTTATTTTTTGG
CAATgtataaaaaatattctttttataactttagaaaaaatcaacataaa
atatatttgaccacaaaaaacattgaaaaattgcTTCCTATAAACaccat
attcatgatatgcaccattgcaatgtcttctgacattacatcacggacct
aatagctgattggttgtaagtgacgtaaaatcagtcaatacgtcactttc
aaccaatcaactgttgggtccgtggaagacattgcaacggtgcatatcat
gaataactaAAATTTCTGCAAAAGTAAAGCTGATTGGCTctgtgtgacgt
catttttcacaTACGGTTGCTATCCTTCGTCATGCCATGGATgtattttg
tttacaaaatcttttagtgagttaaaccatggTTTTTGTTCTCCTCTGAA
ATCATCGAATGTTAGTTATATCACATTATTTCCTTGGTGAAGAATCTGTC
TGAGGAATGACAAAAACTTATGTTTGCCTTGCTTAGTTGGATGATGAATA
GACCTGTATATAAGTTTGTTCCtttgttattttatttaatGGGTGAATTT
AATGTCAGTAGTTCACAACAGAACTGGCGAATCTTTAGTTGCAGACTTTT
CCGAATTGGATAACCGtcgttttttaaaagaacaaactataagaaaatta
ggcttcgatggccaaaaagtcaagaacaaagtttaaaatattttaaggtc
tccaagactctaaaacacccgatctctcaggaaaatggacaaaaa
Run BLAST on NCBI

transcript from alignment at sc0000053:825806..836117+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005452 ID=TCONS_00005452|Name=TCONS_00005452|organism=Clytia hemisphaerica|type=transcript|length=10312bp|location=Sequence derived from alignment at sc0000053:825806..836117+ (Clytia hemisphaerica)
GCTATGCTGAATAATCGAGTCTCAAAGTGGGACTCGAAAAAGTATTATGG AGGGAAGGTAAACACGGGGAGAAATGTGaaacaaagttttaatttttgct tcgaTATCTTATCATTTCTTCAATCGATCGGTGCTGGCTTCCAAAGAAGA AAATATTGGACTGTTTATCTGTTGTTTTGGTTATTGTTGGTTTTTCAGAA ACAAGTTTTTGTTAACAGTTTGTTGTTATAGAAGAAGGAGAGTTGATGTC GGTATATAATCTATTTTGACGAGGAATTTGttgagaaatattttgtttta caaaattaaaatgTACAAATTGTTCCATGAATCACATTATTTATGGTCTA TATATAATTGAGTACATGGCAGAAACAATTGATGGCTTCTGATCATAATT TAATTGACTTTTCTGATGTTACAAACAACACCGACAAACAAGGCGAAAAA ATTCAGCAATCTACAATGGGTGCCACACCAACACCTACCACTTCAAATAG CAGTGTGGCACCTAAAACTATTTCTGATAATGTGAACATCAGTATTAATT TGAATTCTGGGTCTGTTAACCCAGTTAAAACTTCCACAACTGGGACAACA AATAAACCAAACAAAAGTCTGTTTGAAATCACAAGAGTTGAGAGCAACCA TGACGAGAATAATGTTGGAGGAGAGGATTCAGAAATGGATGACTCTGTTT CCAGCTCTACTTCTATATTAGACCAAATATCAAAGGACATTGAAAATGAA AGGAAAGAATTAGCTGCTCcacaaaaaacaaaagtaacAGACAAAGATGA TAACAATACTAATGTGGTTGTGACTCTGTCGAATACAAACCCTGCTAACA GTTCCAATACACAGCCAGGAAACAATAACACCAGTGTTCCAAATTTACAA CATCAAACCTCAGTAGTTACAACAACAAGTAGTACCTCTGCAACTCAACC AGCAGAGCCCCAATCACGATTTAGGATTGTTAAAATTGCTAAGCCAAAAC CATATGAAAAGGGGACTTGGATGGTAAATGACtttaatgagacacaaaaa CAAGAGAAACAAGAGACTTCTACAGATACTGCTCCCTCTTCACCTGCTGT GAAGCGAAATCGAAATCCATTATCAGACAGTGGAGGTGGTGTAACTTCTC CCACAGAACCAATTAAAACAAAATCTTCTGAGTTTCTTGCacagaatttt tcaaatgtacaaTCTCGAGGATCAAGTTACAATACAAATGGTGATAGGCG GTCTTCAGTTGAAAGGTAAACTTCATTCTCATGAAAAACCATGAAAATCC TGTTTTAGGATGTATTTGACAGGTGCGATGATCTACTAGTCCTTTTCAAG CTGTCAGTAAAATTATGATTTGAACAGCGTAAAATGGAGAACTTTCCCTT TCCACTTTACAGCAGAAAAAAAACCAACGcactactcttaggttccaaag aAGAGTTCGAAAAAACAGGGGGCCGGAAAATTTGGGGGGGACCTTATTAC CAGGGTGTTGCAAATTGTatttctgaaaacccaaaaataaggtaaatata gccTAAAATCAGGCtgtttagagcaaaataagcgaccttctctttgacag ctaaaaatattcttgaaaattaataaacagaGAGGGGGGTCCTAATAGAC CTtatttcaaagaggccaccctgttgaataattatgtagtccaaaagaaa aacaatgataaaaccatccataattattacaatatgcatgatatatacag taattatgcatggctctatcattgtttttatggccggactacataattat tcaagaggacgtcctctttgaaaaaagttctAAGGTggaggggtcctaat aaggtcgaggggattggaaaattttcaaaaaattaacaagcgggggatcg tttatttggaacctggtttgaagttggtctaatgtcgacatccctctcct aatttcgacacccttctttagagataggaataataggaaggtcattgata aacaaaagattattcctctctaatcactaagcaaagaaaaatagtttcaa tcAGTTGTTGCAGCCTTCCCTTTATTCCtaactctaaagaagggtgtcga aattagaagagggttgatgacattagaccaacttacagtaacCTTCAATA AAGTTTGTATTTTAAAGATCATCATTTTTGGATTGTTAATCCTAAGCAtg taccgggtgtgccacaaataagttaccaTCTTTGACTCGATATTGCAGGC ACTAgcagaaagatttttcaaagattgttttggaatcattcagaggaaag cctaacttaaaatttggtgtattactttttgattttacttcattagttca aaagttatgttcaaaaacctaaaatgtcagtttaaaaaaatgtcaaaaaa ggcgaacataacttttgaaccaatgaagtaaaatttaaaagtaatacacc aaattttaagttaggctttcctctgaatgattccaaaacaaaaaatctct tttctattgcctacaatatcaaatcaaagagcgtaacttatttgtggcac acccggtaaataaaaagattcaaaagcaaaatgagatgaaaaaagaagaa gaaaataaattacTCATGGTCATGACTTATTCTATACCATTTTTATATTG GAGAACCTTCAATTTTAATGATTATCACTGttaaactttcgaaaaagatt TATTCAATATTAGGTACGAGTCGAAGTTGATTATTAAATAAACTTAAAAA TGCTAAAAAGATAGCAAAATGGCTCTCTTTTTAAGTCAACCAAaaccaga ttttttttccaaatatttttacATGCTAATATCCATTCACTCCGAATCTT TTCAATGAGCCCAAAATCTAAGGTctctataaaaagttattcacaTTTAA TTTTACTTATAATTAATGAGAAATACTTTAATTTTAACAATTTCAACAAT TTAATTGGCTAACAAAGTCTCACACTTCACCAGAGGGAATAATATATCAT CAGATCTTGAACCTGGCCTTAGCTTAAAGTTACTGGTTTAAATATTgatt atcaaaatttaaaaggagGTATTCCAAAAGTACACACGTTCCACCAAAAA CATATTAAAGCATCAAAGGGAAGGAGAGGTTTATAATGTAAACATTTCGT TTAATGGGCTTTTCTAGAAATAGTCCGTACCCCctgatatccagggggtt aacgatttttgttcaaaagtggatatccaggaggttaaatatctacaagg gagcgcatatacagggggtaaagtgtctttatAAGAggggatatccaggg ggttgagcatatttttaagagttgatatccagggggtctttactaataaa gtaggatatccagggggttccatacttcgaaaaatcaatatcctcaacag tgggggtaaaaagtttttctggaaaagcccaatcatTTCTTTTGGTTTAT CATCGGcttaaaaaaattggttttgccCTCAAATGACTTTTGTTAGGAGT GATATAAAACTTAGAATCAAATCAGATCAAATTGGTTGAATCATAGTTCA AGTTATAatcacaaaaatcttttgcttACCCAAAAAAGTATGCTCATTAT GGCTATATTTccaagaaataaaattttttcgcGTATTACTTCAGTTATCG TAGATCACTATAAAATGCTTTAATGCAAGCTtacttttttatacaaaatc taGGTAAAGATAAGCTTACGTTATGCTTATAAGACACACCATAATCTACA GTTGGCTTTCTCTATTTCGATCTTCAAAGGAccaaaaatcttctttgaac CAAAAAAAGATTCGTATTACAGAGAGTACTTTATGCTTCTTTTCAGCTAA GGGGACCATTATTTTAATTCGAACTGCAGAAAATTTCGAATAGTAGAGAG TTGACTGCAGTGTGTACAAGACGTTTTTTCATTCATGAATTTTATAACTG AAAGGTGGTCAAACCaagaaaaaagcttaaaaaatgtttatatGTCCTTA TCTCTACGGATATTTTTTCTAAAGAGTACATTTtataacatttaaaaaat ttttttccattgtTACTTTTTATCTAAATTATCATCAAAACCTCAATCAC GCTAAACACGCACTTCTTTATATAATTATAAGCgcaaaaaagttcgaaaa aaaATGGTGCTAAAAAATGTCTTTAAGATGTTATGTTCGATATTATGTTC GATTCTATCGAACGAATAGTAGATACGTGTAGATAACCTTCAAAATACTT AAATTGGACTTTTTCTAACGAATTTATAAACAGTTTGAGCATTTTAGGct tcaaaatcaatcaaagtacAATCCCAACCGctatatttggcacaaaagtg GAATTCCCAGGGGGGTACCAAATTGTGGTACTGAACCAGTGCCGAAactt tttctagttttttgaaatctttctgaGACCACTACCCTTAAAATTTTTCT GGGCCGCCCTTCTAATATCAATCCACAGGGTATTAGGCATGTCTGGACCA AATTTGGTGCTTTATTCCAAATTTGCACGATAATTGCACCAATCAGGCCT ACTATGATAACACCCTggggaaaacaaaaaataaaagtttaataAACAAT AAACGTAATAAACATCTTAATAAAATGGTAAGAAATAAATATAGACTGCC TATACTAAGAAATTTGTTGTGGTTCTCAGGATTTTGAGTACCAGATACTA ACTTGATGTCTGATATTTGGTATTGAGACCACCATTTAGTCCCTTGATAc aaagttgcaaaaatgttttttggacctacctaaaggtagtcctttaaatt gacccttgtccgttcgttcgttcgttcgtccgttcgttcgtccgttcgtt cgtctgttgccagcttttctcgagatcggctcattagttttttctaattt tNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttcaattgtcaataaaa ctgatttttgcgaccagaacttcctatttattttttccctacaacccttc tctctccccccatcaacaatcaatgatgaatttattgttttgtgtatttt gctaaatgctatattttctgactgatttttttcatttttcttttcgcatt gctaactaacttttcatcatcaggtaggtccattcagcatgttgcttgtt tcaaTTAGGATGACCACTTAGTACCATgtactaagttgttttttacttac cttatcAGACCACCACCCGGCACTAGCCCCCACAACTCAGTACCGACtaa atgcccccccccctgaaattccctcaaaaattgaaaactgcAAATGATTT TATGTGCTTTAAAGTTGGTTTGGaaaatagagttttaactctgagtttta acatgagacttaagacttctaaatctaaaagccaaaaaatattctaataa ggctgagaataaaGCCTGGAaaccacttaacccctcccaaatcgaaaaac ccaatgaaacaaagtgggAGTACTGAAAacgcaattctcgcccgaacttt aaattctgaaaaatcttaaaatacactaaaatctcaatattcgaccatga ttgtagataacCTCCTAAATActcaaattttactttttctaacgaaTTCC TAAAACAGAGGATGGACCGTTTTTAGGCTGAAAGTAAAGTAGCGAATGAC CCTCAATTACTAATGCAGATTAGTGACATTCGAAATAGATTACTCAtcta ctttttctcttttttttttcaacagcacGACGGTCAGCGAATCGGGGTCA GGGACGCCCATAGTCACGCCAATGGTCAATGCATTGGAACTAGCTTTGGT AatatgtttacattttgtccTATCGTTTTGTGTGTTTTGTTCTCTGCGTT TCCTTCCTTTTTGAAAAGTTGTTTTATCGGGGAGGGGGTTGGTAATAAAA TCTCGGAGATCGTGATGTTTAGTGACGTAGTGTATCCTGTctaaaattca agaaaatttttggtGCATTTGTactaaaatttgtgattttaatcattttt tggaatctttttcagaatttttcgtaaattttaagttttttcattttaag aatatttcctGAGTTGAATTATTTTTGCATTCAGTCAAATGTCTGCTCGA TTCATAAAGCATCATTGtttaaaagtatcaatttttgagaaaaatgaata ttatgttgcaaaaatcagcaCTCTTGAGAAAATTGGTCCCGAGAAGACAA AATTTTTCCTGAGAAGACCAAAGTTGGGTGGTCTCTGTGTCAAATTGTcc cccaaaaagaaaaaaacttgtaaCCTATTTCAAGTTTTCATCGACAACGA TAacttattgattaaaaaatgtcaaataataGAGCGCCATTCATGAGAGT TTTATTTCgatcgaaaacgggagctttTCGAATTAAAGAACATCAAACAA GAAAGTGTCAACCGTGAAGAACAAGTGAATTGTGCCAAATGGAAATCTTG TTCTTGTTCCTGCAACAAAATAatcttaggttttttctcaaataatacTT CTCGaacgttttgaaaaaaatcaatcgTTTTCCTCAGCTCCTTCGTTTCA TGCTGGAAATCTCCAATTCtcactttattttttctttccaacaggaacaa attcaaaatatccgTGATTCCATGGTAACATCCGTTTCCGACGAAGtgaa aaaactgaaagaaattATAGACAAAGTTCAAGCTGACAACACCAGGCTAA AAGAGGAGAATGACTCactaaagaaaaaactttcagCGGCTGAAGATCGA ATTGCTTTGCTTGAGAAAGGGTAACTTTTTCTTACCGCCTGGCGCGCGCG GGATGTGTGGTACGTCCTTGGATCACCGCCAAGCCCGTACGGTCACTGTT ATTGCTTGCTGATGATTCTGGAATGATATGACCTGCGACCGCAGGATAAG AATCTTGCTTCTCGACTTTTTCCAAatcgaaatgaaattttaagtcTACG TAGACGATTATCAATGTATCTCATTCTCAAGAAATGATCTGATAATAGCG GCGCTTCGTTATAGTTAGTTTTATACTTTGGCGGTGAACGTTGATTGAAt gcgaaaatgtttttttggctGGTTTGGCACGTCATTTGATTCTGAATGGT TGATGAAAGGCGGGGCATGGCTtgcaaattgaaaaagaaaacggaATTTA CAAATTTATGAAAAACGCTTTTAAGACgacaaaaaatatgttttatgaca aatgaaattaaaatgatgtAGATTGGATtgtttttagaacttttttcttc ttttaaagtGAACAGGAACAGCTTTGTCACTCAATAGTGCCCATGCTAAC GAAATCGAAAGNATAAAGTGAACAGGGACAGCTTTGTCACTCAATAGTTG CCCATGCTAACGAAATcgaaagttttctttcaaatacgCTCTAGCTCTGT AAATTTTATCCTTATAATGCGAGAAACTTCTTCTTTGAGAGAAACGAGAT GACTTTTGTTTTGGAGTGGGGTTAGTTTCTCGAATTactgtattacttcg aataaacgcctcctttcttttaaacgccccctttcttttaaacgcccctc cctAATGGATAAGTTTTCAATAAACGCCCTCTCAAATAAACGCCTCCCCC CTGTATTCAACCCCATTTTGACCAATTTCTTCATCTCTAAGATGACATAG TTAAactgaaagaaaacgaaaaatcaaaacaaggtTGCCATTCACTTTAT TAAAGTGACATTGGTTAAAGATTGttcaataaacgcccctttATTTTAAA CgctcccttcttttaaacgctcCCTCGAATTAACGCCCTTCTAAAATCTT AATGAACGCccagggcgtttattcgaagtaatacttATACTACTGAAAGT TGTTACGGCTTACCACGCAAATGCAGATCGCTGCGCTGAGTAGAGCTGAT TGGGCATTCCATGCGCACATGACTTGCTTTTCTTTggcttttgtaaaaaa taatcatCTTAACTTGTACGGAGATTTGAGGCTGTGCTGTTTAATTAATA TCTAACAGCAGTAACTTAAGTACAGTAGATTAACCAtccctgtatcacag acccgctggaaccccagccccactggactGGAAAGTTTGCCTAAAATTTC TTCCCCGGTTGGAAAATAATTTCGTCCCACTTGCCCTCTCAACCATCTTC TGGATTTTTTTGAGCCgagaaaaatagaattttttgtGGGAAATAATTtc catcggggctgtgagacaggggtgtgattaAGTTTTACTTCGAAGATAGC TGTAACCAAGCTATGGAGTCGAGTAACAATTTCCCAATAGCTTATCACCc tccaaaaattgtttttcatttacgTGTGGAATGCCCAAGACGTCGAATTT CTTCTGACAATATAGAATGGAACCGTTAGGAAGGAAAATTTTGCCCAATT TTTAACGGAtcgttattgaatttttttttagaatcctCGAGAGTGAATGT TAAATATACCTCTATTATATATCATATAATAATTATACTCAAAAACTTCT TTGAGCTTATTTTTTGGCAATgtataaaaaatattctttttataacttta gaaaaaatcaacataaaatatatttgaccacaaaaaacattgaaaaattg cTTCCTATAAACaccatattcatgatatgcaccattgcaatgtcttctga cattacatcacggacctaatagctgattggttgtaagtgacgtaaaatca gtcaatacgtcactttcaaccaatcaactgttgggtccgtggaagacatt gcaacggtgcatatcatgaataactaAAATTTCTGCAAAAGTAAAGCTGA TTGGCTctgtgtgacgtcatttttcacaTACGGTTGCTATCCTTCGTCAT GCCATGGATgtattttgtttacaaaatcttttagtgagttaaaccatggT TTTTGTTCTCCTCTGAAATCATCGAATGTTAGTTATATCACATTATTTCC TTGGTGAAGAATCTGTCTGAGGAATGACAAAAACTTATGTTTGCCTTGCT TAGTTGGATGATGAATAGACCTGTATATAAGTTTGTTCCtttgttatttt atttaatGGGTGAATTTAATGTCAGTAGTTCACAACAGAACTGGCGAATC TTTAGTTGCAGACTTTTCCGAATTGGATAACCGtcgttttttaaaagaac aaactataagaaaattaggcttcgatggccaaaaagtcaagaacaaagtt taaaatattttaaggtctccaagactctaaaacacccgatctctcaggaa aatggacaaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003102XLOC_003102Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005452-exon-sc0000053-1491911889:825806..827070TCONS_00005452-exon-sc0000053-1491911889:825806..827070Clytia hemisphaericaexon
TCONS_00005452-exon-sc0000053-1510915933:825806..827070TCONS_00005452-exon-sc0000053-1510915933:825806..827070Clytia hemisphaericaexon
TCONS_00005452-exon-sc0000053-1575043694:825806..827070TCONS_00005452-exon-sc0000053-1575043694:825806..827070Clytia hemisphaericaexon
TCONS_00005452-exon-sc0000053-1491911889:832581..832653TCONS_00005452-exon-sc0000053-1491911889:832581..832653Clytia hemisphaericaexon
TCONS_00005452-exon-sc0000053-1510915933:832581..832653TCONS_00005452-exon-sc0000053-1510915933:832581..832653Clytia hemisphaericaexon
TCONS_00005452-exon-sc0000053-1575043694:832581..832653TCONS_00005452-exon-sc0000053-1575043694:832581..832653Clytia hemisphaericaexon
TCONS_00005452-exon-sc0000053-1491911889:833450..834141TCONS_00005452-exon-sc0000053-1491911889:833450..834141Clytia hemisphaericaexon
TCONS_00005452-exon-sc0000053-1510915933:833450..834141TCONS_00005452-exon-sc0000053-1510915933:833450..834141Clytia hemisphaericaexon
TCONS_00005452-exon-sc0000053-1575043694:833450..834141TCONS_00005452-exon-sc0000053-1575043694:833450..834141Clytia hemisphaericaexon
TCONS_00005452-exon-sc0000053-1491911889:834203..836117TCONS_00005452-exon-sc0000053-1491911889:834203..836117Clytia hemisphaericaexon
TCONS_00005452-exon-sc0000053-1510915933:834203..836117TCONS_00005452-exon-sc0000053-1510915933:834203..836117Clytia hemisphaericaexon
TCONS_00005452-exon-sc0000053-1575043694:834203..836117TCONS_00005452-exon-sc0000053-1575043694:834203..836117Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000053supercontigsc0000053:825806..836117 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.67714 4.30221 7.99424 9.78301 27.8618 19.791 16.7221 17.0967 10.208 13.8113 10.7277 8.27512 9.21197 9.57313 8.36476 9.70886 16.1259 15.3749 9.62106 10.6579 20.3444 20.8008 17.7026 17.7442 11.1352 12.9394 12.8639 10.5481 20.7107 21.4424
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005452 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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