TCONS_00005453 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005453
Unique NameTCONS_00005453
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1452

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005453 ID=TCONS_00005453|Name=TCONS_00005453|organism=Clytia hemisphaerica|type=transcript|length=1452bp
TTGAAACTTCTTcagaattatttcttttttaccgTTCAACCAGGTTCAAC
AAACTTCACCAAATCTTCTCTTTtttcatattcatttttttcagaaatgt
aTTGAAGATAAAAAGCAATGACAATATGACTAAACTACTATTTCCCATTG
CAATCAATGCACtttattctttgttttcattctTCTTGGCACTGAGATTG
ATCCCTGGTGCTAAAGATCTTTTCTTGAAAGCTGGATTGAAAGGAAAAGA
CCTgaataaaaaggagaaaaatgaaatCCCTGAATCTCTTGGTGTGATTT
GTGGCACAGTGTTTTTGATATGTATGTTTCTCTTTATTCCTGTTCCATTC
GTCACACGATGGATGGAAAATATGGTGGGACAAGAGCAGACTGTTTTTCC
GCATAATGAGTTTGTGGAATTCATTGCTGCCCTTCTATCCATATGTTGTA
TGATTTTATTGGGCTATGCTGACGATACATTGGATTTGAAATGGCGATAT
AAACTAATCTTACCTACTCTGGCATCACTACCACTTCTTATGGTCTattt
cgtgaattttgggtcGACCACTATTGTGATTCCTAAGCCGCTTCGTGATA
TCATTGGGATCAATTTAAATTTAGGAATCTTTTATTACGTATACATGGGC
ATGTTAGCCGTCTTTTGCACCAATGCAATCAACATTCTGGCAGGTGTCAA
CGGTTTGGAGACATCACAGTCTGTCATCATTGGTATCTCAATCTTAGTGT
TCAATTTCATGGAGCTGTCTGGTGATTGCTGGAAAAGTCATTTGTTTTCC
ATTTATTTCTTGTTGCCTTATGTAGCAGCTTCTTCTGCCCTCTTATATCA
CAACTGgTATCCTTCTTCGGTTTTTGTTGGTGACACTTTTTGTTATTTCT
CTGGTATGACTTTCGCCGTTGTTGCCATCCTGGGCCATTTCAGCAAGACC
ATGTTACTCTTCTTTATTCCACAAATTCTTAATTTCCTGTATTCCGTACC
GCAGCTGTTCCGGTTTATACCGTGTCCGAGACATCGGTTACCCTCATATG
ATTCAAAGACTGATAAACTAGAACTCAGTACAACACAATTCAAAACAGAG
GATTTGAATATATTGGGAAAAATCATTGTGAAAATAGTTTCAACGTTTCG
TATTGGTTTTGTGCAGaacaagaaaattgataaagaCGAGTATACTGTGA
TGTCTAATTTAACTTTGATCAATTTTGTGATCTTCGTGCTTGGACCAATG
CATGAAAAACGTGTAACGCAAGTACTTATGGCCATTCAGGTACTGGGAAG
TTGTCTAGCATTTTTCGTCAGATATCAATTGGCAAGGCTGTTCTATGATA
CGATAAAATGATTGCACGAAACTCTTTTCCATGCATGCAAACCACACCCA
AACACATCTGACACAAAATTGTTTGTTTCAgcttttctgttgtttttttt
NN
Run BLAST on NCBI

transcript from alignment at sc0000053:17804..26566-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005453 ID=TCONS_00005453|Name=TCONS_00005453|organism=Clytia hemisphaerica|type=transcript|length=8763bp|location=Sequence derived from alignment at sc0000053:17804..26566- (Clytia hemisphaerica)
TTGAAACTTCTTCAGAATTATTTCTTTTTTACCGTTCAACCAGGTTCAAC
AAACTTCACCAAATCTTCTCTTTTTTCATATTCATTTTTTTCAGAAATGT
ATTGAAGATAAAAAGCAATGACAATATGACTAAACTACTATTTCCCATTG
CAATCAATGCACTTTATTCTTTGTTTTCATTCTTCTTGGCACTGAGATTG
ATCCCTGGTGCTAAAGATCTTTTCTTGAAAGCTGGATTGAAAGGAAAAGA
CCTGAATAAAAAGGAGAAAAATGAAATGTAAGCAGTACTTCCAGATGATT
AACTTCGAATGGGTAAAAAGGGGCTAATTTTTTGAGAGGTGCGCAGTTTT
ATCACTTTGACGTGGAAGCAATGTCAATTAATATGACTTTGAAAGTACTA
ATTCTGTAAAGGCCGGTCTCCACTTGCACGCGCTTCAATCACACTTTTTC
AAGCAAAGCTTTCCACACTATTGGTAAAAAGAAAAATGAAGCAGCTCCAT
TGGCGCGATCTGACGTAACAGTTGAAAAAAGTTGAAATGTATTCAACTTT
TTTTTCGAGGGTGCGCTGCATTTTTATGATGTAATCTTTTTTTTAAGCAA
AAAGGATTGAAGCCAAAAGGTTCAATTGCAGCCCGCGCAAGTGTAGACCG
GTCTTAATAAGAGTTGCTACATGGTAGAAAACTAGAAGCACAGAGATTAT
TGTGAACCTATGAACTTTGGGATAACAGGTTTGTGCTGTTCAACTCCTGG
TTATCTTAGAACCTTTTTAAAGAGACAAGTCTGAGATTTCTTGAATTTTG
CAACTATTTTACATTGATCCAGAGAAAAGCACATTCGCCTACAATTTCCC
ATGATTTTTTGGGTTAATCGTATTGATGGATTTCACTTAATTTAGATATT
AAAATTCTCCTAAACCTTAACATCTGGGTCAAATATTGAAATTTATACAG
TATAGTTCTCTAGGCCTTAAAAGGCCAAGGTTTTTTTATTTTTCCATGCT
GCTAAATTTCTTTATTTTGTTAATATCTTCCCATTTTCATTTTAGCCCTG
AATCTCTTGGTGTGATTTGTGGCACAGTGTTTTTGATATGTATGTTTCTC
TTTATTCCTGTTCCATTCGTCACACGATGGATGGAAAATATGGTGGGACA
AGAGCAGACTGTTTTTCCGCATAATGAGGTTGGTACAGTTTCACCTAATT
AATTTGTTCGTTGAAATTGTCAAAAAAACATTGATATTTATTATGTAAGT
TAAGATTAGAAGATTTTTCCACGGTTTAACAGTTTAAGTGGTCTTATAAT
CACTACCTTTAACTACAGATGATTAGATAGGTTAATTATCTAAGTTACAC
CATGAAGAATCTAGAAAGCATAAATTTTGGCTTTTTTTTTGTATTAGATC
GTACTCCAAGGGGGGTCAGGATCCAGATACCAAACCCAGGGCCGGGGGTG
GTGTCAATTTTTTTTTCAAAATTCAAAAAGTCAAGTTGGTATCGATACCA
AAATGTGGGGGTGGGTCCCCCTTTTTTTATTTTTGCTGAGTTTGAAATGT
TGTATAATGTAAGTATAAAAACTTATTTGAATCGTTTACACTATACCCTG
ATTCCATATAAAAGCATTCTTCATTCTATAGTTCAAATTAAATTTATATT
TAAGTTTTGCTGCTCTCAATCCTTTCAATCAACCAAAATTCATTCAAAAC
TAGAGTTGAACAAACTGAATAAAGTCTTAGCAGGTCTTAGAACTTTTTTA
GTCGTGATAAAATTTTTCTGTACATAACGTTCATCATTATAGGCTATCTA
ACAAAGACTCTAGGCGTGCCTAATACAATGAGTTTTTTATCTAGTCTAGT
TTATCAACTAGTTTTATGAATTTAATACATTTTGCCAATTTAGTTCAAGA
AACTTAATTTACATTGCGTTAGACTTGTTTAAAGTGTGGTACATAATATA
AGTCATTAATAAGACGAATGTTCTTATGCAGTATCCTATGCATATAACTT
CTTGCATTTTTACTGATTGCCAATTTAGGGGGGGGGGTCCCCCTTTTTCA
GAAAATCAGGATTTTTATGTTGGTATCGATACCAATTTAAGGGGGTGGGT
CCCCCCTTTTTTAGACAATTGGGGTTTTCAAGTTGGTATTGATACCAATT
TAGGGGGTGGTGGTGTCTACTACTTTCAAATCTCGAAAAGTCATGGTTTT
TGGGCCCTGGGTTGGTATCCTGGACCCTGACACCCCCCCCCTCCTGCTTA
CTCATGAACTTTCTTTTATAAATTTTAGTTTGTGGAATTCATTGCTGCCC
TTCTATCCATATGTTGTATGATTTTATTGGGCTATGCTGACGATACATTG
GATTTGAAATGGCGATATAAACTAATCTTACCTACTCTGGCATCACTACC
ACTTCTTATGGTCTATTTCGTGAATTTTGGGTCGACCACTATTGTGATTC
CTAAGCCGCTTCGTGATATCATTGGGATCAATTTAAATTTAGGTAAGCTG
TTGTTTTAAAAGTTTTACGAGTTACTATATTTTGCATAGGTGAACATGTG
ATGACGGTTGTCTTTATCAAGTTGAATATAAGTGTAGAAAAATGGATGTT
ATTTACAATAATTTGGCTGAAAATATCTTGGGAATAAAAATTTTGCATAT
ACATTTTGAAATTATCACGTTGACTTTAAACTCAACGTTGACTGTAGAAT
GCCGTTGATTGCTCTGACTGTTAATCAACAACACCCACATAGCTGATTCT
GTCAAAGGAGAAGATTCCCTTAAGCTATTATAAAAGCTTTCAGTTTTTAT
CAAAATGTTGGTTCACTTTTATCTTTCAGGAATCTTTTATTACGTATACA
TGGGCATGTTAGCCGTCTTTTGCACCAATGCAATCAACATTCTGGCAGGT
GTCAACGGTTTGGAGACATCACAGTCTGTCATCATTGGTATCTCAATCTT
AGTGTTCAATTTCATGGAGCTGTCTGGTGATTGCTGGAAAAGTCATTTGT
TTTCCATTTATTTCTTGTTGCCTTATGTAGCAGCTTCTTCTGCCCTCTTA
TATCACAACTGGTAAGCGCTGCTTAGTGTTCATATTTTTTTCTGAAAAAA
TTAAAAACCTATATTGGGCCATTCCCTTTTATATCCATACAGGGGGGGAG
GTGGACGAACATTTCCAGAGGGTAAAATAAATTCAATTTTATATCTTGAT
CCAATTCTGCTCAAAGGCGTTGCTAAACATCCGAAGACCCTGTACCTAAT
GATAATTTTTTTGAATTGAAAAGGTTCGTCCATCCCCTGTTTATGGTTTT
TTAATGGAACAGCCCATTATGTACAGGGTCTTCGGATGTTTAGCAACGCC
TTTGAGCAGAATGGATCGAGATATAAACTTGAATTTATTCAGTCGTTTAT
ACTTTCATGGTTATTTTGCTTCAGTTACTGACGAAAAAGTTCAATCTCGT
CTTTTATATAAGATATCTATGATATCAACCCTGATTCTAAAGATTAAATG
CTATTGCATTGACCCCACACATGTTTGACGACCGTGGTTGTAAACTTTCC
TTTTCAGTGAAAACAGTGTTCGTTTCAGTGAAATCAAGGCACTGAGTTTT
CTATAAGCCCTGAAAGCATTCTTCTCAATCCTGACCAACCAAAATCTTTG
ATTTGAGTTTTTGTAAAAGTAGCGGTGTAATGCATCGAGTGCGCTAGATC
CACTGACCTTAAGTTAATTTTGAAGTATCCTTATGATTTTTTTCATAAGA
ACACTGATCATAAAGACACTTTTTGTGGTATATCTTTTGAAATATGACTC
TTTGCAGAATTTAAATCTAGGGCTGAGCTGTTTTTTGTACCACAATTCTG
TGATAGTAGCTCTGGTTTTGACGATTAGCCAAAATGTACTAAATGTTAGG
GCATAAATAAAATTTGTCTGTCGTACCATGATTTGTATCTTTAGGTCAAA
TAACAGTAAATGCAATTTAAGTACATCTGCTAAGGCTCTAAATTAGTACT
TTGTACCAGAGCGTACCTCACGTTTATCGTTTCGTAGTACACTGTGCTTT
GTCTATTTGATAAAAAATTCCCGTACTGAAACCTCTGCAATGAAGTACGA
TTAAAGAATAGCAACACTTCTCTCGTCTTCTCCCTTCTCTCACCAACATT
CCATCGCAGCGGTCGCTTAGAAAAATCTCAAATCAGAAGAGGCAATGACA
ACAGACCCTCCTTAGTTTTTGGTATCCTTAGGCATCTTAGTTATGGAAAT
AGTTAATGTTCGACCAGATCGAATCGGTAGCTTATATAATTTGTAGGGCC
AATATTGAAGTCAGCTTCCTTCCAACCTTCAAAATTTCAAAACTGTTTTT
TTTTTTTTAATTTCCAGGTATCCTTCTTCGGTTTTTGTTGGTGACACTTT
TTGTTATTTCTCTGGTATGACTTTCGCCGTTGTTGCCATCCTGGGCCATT
TCAGCAAGACCATGTTACTCTTCTTTATTCCACAAATTCTTAATTTCCTG
TATTCCGTACCGCAGCTGTTCCGGTTTATACCGTGTCCGAGACATCGGTT
ACCCTCGTAAGTTTTCAGGTTTTGGAATACACGCTTTTTTATACGAACAT
GTGGCTCAATTTTCGTAAAAAACACAATGAGAAATTTTATGAACAATGCT
AATGGCTAAGATTCGATTTTAATCCCCATTAAAAGTCAATGAGTGAGGTA
AGCATCCTAAAAATATTTTAAGAAGATTTAAACCTGCATCACGAAAAAAT
AGAACAGCCGACAAAACGTGTAAGATAACATTTTTTTCTGTTTTCAGATG
CTTCTTTATATGTCTTTTATTCCACTTTAGATATGATTCAAAGACTGATA
AACTAGAACTCAGTACAACACAATTCAAAACAGAGGATTTGAATATATTG
GGAAAAATCATTGTGAAAATAGTTTCAACGTTTCGTATTGGTTTTGTGCA
GAACAAGAAAATTGATAAAGACGAGTATACTGTGATGTCTAATTTAACTT
TGATCAATTTTGTGATCTTCGTGCTTGGACCAATGCATGAAAAACGTGTA
ACGCAAGTACTTATGGCCATTCAGGTAATTATAAATATTTATCCCTTTAT
TTTTGAATTCGTCAAGGTTTTAAATGTCTTTAAATACCAACCTCGCTCCC
TGAGTATGATCGGCTTTTTGAGTCCTTTGACGCTTACTGATAGCGCCATT
TCTGTATGGCTTCCATCGAGTAACGTAAATATTGTAATTAACGTAAAGCC
TGGGGTACACGTGAACGAGAATATTTCAGTCCTATTCTGTGGAGCAATAT
CATTTGGGACCAGGCTAGAATATATTAATGATGAATAAATGTAGGCTATA
AGTGAATCATTTCCAACAGAAATTTTGATGCCGATTTTGATCGATTATCG
CACGAGAATTAAATTTGCTACTTTTTTTGTTTTTGCACGGTACGTTTTTC
GAAATCAGTCAGTAAATGTTATTTTCGATCTAGCAATTGCATGAAAACCA
GGCGGGCCTTATTGAAGATACTTTGGCAATATTGGAATCAAAACTTCTCT
CCATCGAAGATTGATATTCGTATCATCAAAAACATTAGAAAAAGTTGCTG
ATGATTAAAAAAAGAATTTAACTTTCTTGTTTTAGGTACTGGGAAGTTGT
CTAGCATTTTTCGTCAGATATCAATTGGCAAGGCTGTTCTATGATACGAT
AAAATGTTAGTACTCGATGTTTTGTCGGTGGTTTGTTTAATTTACTTGAT
TTAAAATTCAAGGAATCTTTATGGCCAAGTTCAAACAAGGAGCTGCATGA
GTCGTAAATTTTAAATCATTAAAGAATATTAATAAATTATATAAAATATT
ATAATTATTAATAGAATATTGCTGTTAAAAAAACTAAAGATAGGGATGCA
AATTTACCATTAAACCTCGTTAAAATTATCCTTTTCTCCTCGGATTAGGA
TTTTGCATTTAGAATAAATTTAAACTTTTTGTACATTAGTCTTTTTAAGT
TTACTAAATATATCGATTTACTGATATACTTAACTTATTTATAGTGTTTT
TTATGTATAGTGTTCGTTAAATTCTTTAAAATTTAAAATAATAAATAAAT
AGTATAATAAATTTCAGTTAAATAACACTGTTGAGAACGGTAACACTTTC
CATACGTTTATTTCTATACGATGGTGAATTTTCATAAATTCGTGGTTACA
AATAGGCTGCCAATATCCCTCCGGTTTGTCTTGTTGTGATAAGAACTATT
CCAGGTATCAACACAGCTTAAACTACAAAAGATCCCAGTGCGTTGTGTAG
TTTGGCCTACATCAAACTCTTAATNAACTTTGATCAATTTTGTGATCTTC
GTGCTTGGACCAATGCATGAAAAACGTGTAACGCAAGTACTTATGGCCAT
TCAGGTAATTATAAATATTTATCCCTTTATTTTTGAATTCGTCAAGGTTT
TAAATGTCTTTAAATACCAACCTCGCTCCCTGAGTATGATCGGCTTTTTG
AGTCCTTTGACGCTTACTGATAGCGCCATTTCTGTATGGCTTCCATCGAG
TAACGTAAATATTGTAATTAACGTAAAGCCTGGGGTACACGTGAACGAGA
ATATTTCAGTCCTATTCTGTGGAGCAATATCATTTGGGACCAGGCTAGAA
TATATTAATGATGAATAAATGTAGGCTATAAGTGAATCATTTCCAACAGA
AATTTTGATGCCGATTTTGATCGATTATCGCACGAGAATTAAATTTGCTA
CTTTTTTTGTTTTTGCACGGTACGTTTTTCGAAATCAGTCAGTAAATGTT
ATTTTCGATCTAGCAATTGCATGAAAACCAGGCGGGCCTTATTGAAGATA
CTTTGGCAATATTGGAATCAAAACTTCTCTCCATCGAAGATTGATATTCG
TATCATCAAAAACATTAGAAAAAGTTGCTGATGATTAAAAAAAGAATTTA
ACTTTCTTGTTTTAGGTACTGGGAAGTTGTCTAGCATTTTTCGTCAGATA
TCAATTGGCAAGGCTGTTCTATGATACGATAAAATGTTAGTACTCGATGT
TTTGTCGGTGGTTTGTTTAATTTACTTGATTTAAAATTCAAGGAATCTTT
ATGGCCAAGTTCAAACAAGGAGCTGCATGAGTCGTAAATTTTAAATCATT
AAAGAATATTAATAAATTATATAAAATATTATAATTATTAATAGAATATT
GCTGTTAAAAAAACTAAAGATAGGGATNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNATGTATAACATGCCATAGTTTTG
TTGGTTACATCAGTCAGAAAACACATTTTAAACACGGCAATTATGAAAAA
TTCACTATGGTCAGAGCCCTTAATTATTTTTGTATGCCTTTTTCGCGACG
CACCTGTGGGGAGATAAGGGACCCACAAGTTGATAACGAAAAATAGCAAA
GACTATTGCAGGATTTTCGCTCTCACTGTAGGGGTTAGCCACTAGGATTT
ATCTTTTGGCAATGACGGTACAAAGGGGATCCATTAGTGTTATAAAGATC
ATATGTCTCAATAACAAAGTAACTCAAGGTATAATCAAACTTAAAATCTT
AAAATCAGGTTTTCTCTACAAGACTACAAGGTCGTTCAACACAAAACGCA
TTTGCTTGTATGTTTTTACAAGTTTTATTATGAAGATATATTTTCATTTT
TGCTTCTTTTCTTTTCATAGGATTGCACGAAACTCTTTTCCATGCATGCA
AACCACACCCAAACACATCTGACACAAAATTGTTTGTTTCAGCTTTTCTG
TTGTTTTTTTTNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003103XLOC_003103Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005453-exon-sc0000053-1575043694:26290..26566TCONS_00005453-exon-sc0000053-1575043694:26290..26566Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1575043694:25389..25521TCONS_00005453-exon-sc0000053-1575043694:25389..25521Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1575043694:24075..24288TCONS_00005453-exon-sc0000053-1575043694:24075..24288Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1575043694:23506..23737TCONS_00005453-exon-sc0000053-1575043694:23506..23737Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1575043694:22011..22199TCONS_00005453-exon-sc0000053-1575043694:22011..22199Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1575043694:21493..21736TCONS_00005453-exon-sc0000053-1575043694:21493..21736Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1575043694:19532..19601TCONS_00005453-exon-sc0000053-1575043694:19532..19601Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1575043694:17804..17896TCONS_00005453-exon-sc0000053-1575043694:17804..17896Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1510915933:26290..26566TCONS_00005453-exon-sc0000053-1510915933:26290..26566Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1510915933:25389..25521TCONS_00005453-exon-sc0000053-1510915933:25389..25521Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1510915933:24075..24288TCONS_00005453-exon-sc0000053-1510915933:24075..24288Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1510915933:23506..23737TCONS_00005453-exon-sc0000053-1510915933:23506..23737Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1510915933:22011..22199TCONS_00005453-exon-sc0000053-1510915933:22011..22199Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1510915933:21493..21736TCONS_00005453-exon-sc0000053-1510915933:21493..21736Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1510915933:19532..19601TCONS_00005453-exon-sc0000053-1510915933:19532..19601Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1510915933:17804..17896TCONS_00005453-exon-sc0000053-1510915933:17804..17896Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1491911889:26290..26566TCONS_00005453-exon-sc0000053-1491911889:26290..26566Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1491911889:25389..25521TCONS_00005453-exon-sc0000053-1491911889:25389..25521Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1491911889:24075..24288TCONS_00005453-exon-sc0000053-1491911889:24075..24288Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1491911889:23506..23737TCONS_00005453-exon-sc0000053-1491911889:23506..23737Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1491911889:22011..22199TCONS_00005453-exon-sc0000053-1491911889:22011..22199Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1491911889:21493..21736TCONS_00005453-exon-sc0000053-1491911889:21493..21736Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1491911889:19532..19601TCONS_00005453-exon-sc0000053-1491911889:19532..19601Clytia hemisphaericaexon
TCONS_00005453-exon-sc0000053-1491911889:17804..17896TCONS_00005453-exon-sc0000053-1491911889:17804..17896Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000053supercontigsc0000053:17804..26566 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.1364	19.3439	8.25693	7.09799	7.81358	5.24671	6.88037	7.54063	5.47179	6.07758	5.87013	4.69518	4.86899	5.61832	5.42938	6.60053	10.7668	8.7516	3.82294	4.85767	8.65136	8.50024	21.7953	19.8598	5.56194	6.87835	6.73153	5.68043	16.7901	16.7998
Blast
[Close]
BLAST of TCONS_00005453 vs. Swiss-Prot (Human)
Match: GPT (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase OS=Homo sapiens GN=DPAGT1 PE=1 SV=2)

HSP 1 Score: 459.914 bits (1182), Expect = 1.740e-158
Identity = 237/407 (58.23%), Postives = 308/407 (75.68%), Query Frame = 3 
Query:  129 TKLLFPIAINXXXXXXXXXXXXXXIPGAKDLFLKAGLKGKDLNKKEKNEIPESLGVICGTVFLICMFLFIPVPFVTRWMENMVGQEQTVFPHNEFVEFIAALLSICCMILLGYADDTLDLKWRYKXXXXXXXXXXXXMVYFVNFGSTTIVIPKPLRDIIGINLNLGIFYYVYMGMLAVFCTNAINILAGVNGLETSQSVIIGISILVFNFMELSGDCWKSHLFSIYFLLPYVAASSALLYHNWYPSSVFVGDTFCYFSGMTFAVVAILGHFSKTMLLFFIPQILNFLYSVPQLFRFIPCPRHRLPSYDSKTDKLELSTTQFKTEDLNILGKIIVKIVSTFRIGFVQNKKIDKDEYTVMSNLTLINFVIFVLGPMHEKRVTQVLMAIQVLGSCLAFFVRYQLARLFYD 1349
            ++L  P+ IN + SL  F   + LIP  +  F+ A L G+DLNK  + +IPES GVI G VFLI +F FIP PF    +   V ++   FPH+EFV  I ALL+ICCMI LG+ADD L+L+WR+KL+LPT ASLPLLMVYF NFG+TTIV+PKP R I+G++L+LGI YYVYMG+LAVFCTNAINILAG+NGLE  QS++I  SI+VFN +EL GDC   H+FS+YF++P+   +  LLYHNWYPS VFVGDTFCYF+GMTFAVV ILGHFSKTMLLFF+PQ+ NFLYS+PQL   IPCPRHR+P  + KT KLE+S ++FKT+ L+ LG  I+K+  + ++  V   + +  E+T  +N+TLIN ++ VLGP+HE+ +T +L+ +Q+LGS + F +RYQL RLFYD
Sbjct:    5 SELPMPLLINLIVSLLGFVATVTLIPAFRGHFIAARLCGQDLNKTSRQQIPESQGVISGAVFLIILFCFIPFPF----LNCFVKEQCKAFPHHEFVALIGALLAICCMIFLGFADDVLNLRWRHKLLLPTAASLPLLMVYFTNFGNTTIVVPKPFRPILGLHLDLGILYYVYMGLLAVFCTNAINILAGINGLEAGQSLVISASIIVFNLVELEGDCRDDHVFSLYFMIPFFFTTLGLLYHNWYPSRVFVGDTFCYFAGMTFAVVGILGHFSKTMLLFFMPQVFNFLYSLPQLLHIIPCPRHRIPRLNIKTGKLEMSYSKFKTKSLSFLGTFILKVAESLQLVTVHQSETEDGEFTECNNMTLINLLLKVLGPIHERNLTLLLLLLQILGSAITFSIRYQLVRLFYD 407
The following BLAST results are available for this feature:
BLAST of TCONS_00005453 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GPT1.740e-15858.23UDP-N-acetylglucosamine--dolichyl-phosphate N-acet... [more]
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