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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005513 ID=TCONS_00005513|Name=TCONS_00005513|organism=Clytia hemisphaerica|type=transcript|length=616bp
GGAGGTAGGGCACATAAATGATTACAGTTTTGGTGCAATCGCGTGATTTT
TGTTTtgctcataacttttgatagaaaaatgattttgaaatgaaactTTG
TACGTCATATCTATATTAcaaatcaaacataaaaaacaaaaacaaaaata
attatgATGTCATTAAAGTGTGATTGTGCCCCAAAggttcaaaaattatt
tttgctcAGTTTGGCGCTTCATAACTTTCTATAACAAACTTTGACGTATA
ATCTAAGGAGATATTTACAGTAGGCATTTTTAATGGCTATTCAAATATCa
aaacagtttaaaaaaatcccttttgtatcaaaagttatggctcgTCAAAG
ACAAGtaccaaaaaatgctgattttgCGCATTTTGCTGATGTGAGCACGT
TGCCATGGTAACATAttttaaaattagattttttcagaCTTCTGTTATCA
TAAACTATCATCGTGCCAAGTTTTATCACTTCACCATCAATATTTCCTGA
GATTTGTAGAGGGGATAATTTTATCCCCCAGGCCTGAGAAGCCCTCAAAT
GCCCAGGCTGAATAGGGTTAATTGCCTTGTTTTAAAATTGCAACATGAAT
GGTACTTATTCTAAAG Run BLAST on NCBI transcript from alignment at sc0000053:289979..290594 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005513 ID=TCONS_00005513|Name=TCONS_00005513|organism=Clytia hemisphaerica|type=transcript|length=616bp|location=Sequence derived from alignment at sc0000053:289979..290594 (Clytia hemisphaerica)
CTTTAGAATAAGTACCATTCATGTTGCAATTTTAAAACAAGGCAATTAAC
CCTATTCAGCCTGGGCATTTGAGGGCTTCTCAGGCCTGGGGGATAAAATT
ATCCCCTCTACAAATCTCAGGAAATATTGATGGTGAAGTGATAAAACTTG
GCACGATGATAGTTTATGATAACAGAAGtctgaaaaaatctaattttaaa
aTATGTTACCATGGCAACGTGCTCACATCAGCAAAATGCGcaaaatcagc
attttttggtaCTTGTCTTTGAcgagccataacttttgatacaaaaggga
tttttttaaactgttttGATATTTGAATAGCCATTAAAAATGCCTACTGT
AAATATCTCCTTAGATTATACGTCAAAGTTTGTTATAGAAAGTTATGAAG
CGCCAAACTgagcaaaaataatttttgaaccTTTGGGGCACAATCACACT
TTAATGACATcataattatttttgtttttgttttttatgtttgatttgTA
ATATAGATATGACGTACAAagtttcatttcaaaatcatttttctatcaaa
agttatgagcaAAACAAAAATCACGCGATTGCACCAAAACTGTAATCATT
TATGTGCCCTACCTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005513-exon-sc0000053-1491911889:289979..290594 | TCONS_00005513-exon-sc0000053-1491911889:289979..290594 | Clytia hemisphaerica | exon |
| TCONS_00005513-exon-sc0000053-1510915933:289979..290594 | TCONS_00005513-exon-sc0000053-1510915933:289979..290594 | Clytia hemisphaerica | exon |
| TCONS_00005513-exon-sc0000053-1575043694:289979..290594 | TCONS_00005513-exon-sc0000053-1575043694:289979..290594 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000053 | supercontig | sc0000053:289979..290594 . |
Blast
The following BLAST results are available for this feature:
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